Psyllid ID: psy9256

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
Protein Sequence
MGLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHcccccEEEEEEccHHHHHHcccEEEEEEEEEccccccccHHHHHHHHHHHHHcHHHHHHccccccEEcccccHHHHHHHHHcccccEEEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEccccccccHHHcccHHHHHHHHHHHHHHHEHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccEEEEEEEcccccHHHHHHHHHHccccEEEEEEEccccccccccccccccc
Coil and Loop (DISEMBL)
MGLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCvqagahpqsiYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRElftyayrpsiYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIagivgapysgsytdhl
Flexible Loop (DISEMBL)
MGLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCvqagahpqsiYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSsiagivgapysgsytdhl
Low Complexity Region (SEG)
MGLFSlvgliyliyiivqglFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL
Disordered region (IsUnstruct)
**LFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY********
Disordered Region (DISOPRED)
*GLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQT****RCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDH*
Disordered Region (DISEMBL)
MGLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL
Disordered Region (DISPRO)
*GLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY****
Transmembrane Helix (TMHMM)
iHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	265	2.2.26 [Sep-21-2011]
Q9CXR1	338	Dehydrogenase/reductase S	yes	N/A	0.535	0.420	0.479	8e-27
Q9Y394	339	Dehydrogenase/reductase S	yes	N/A	0.656	0.513	0.345	4e-25
Q5R6U1	325	Dehydrogenase/reductase S	no	N/A	0.6	0.489	0.273	2e-12
Q6IAN0	325	Dehydrogenase/reductase S	no	N/A	0.6	0.489	0.273	2e-12
Q7Q732	317	Dehydrogenase/reductase S	no	N/A	0.483	0.403	0.365	5e-12
Q49117	248	Uncharacterized oxidoredu	yes	N/A	0.418	0.447	0.365	4e-11
Q92EK7	248	Uncharacterized oxidoredu	yes	N/A	0.332	0.354	0.419	1e-10
P25145	248	Uncharacterized oxidoredu	yes	N/A	0.332	0.354	0.419	2e-10
Q99J47	323	Dehydrogenase/reductase S	no	N/A	0.437	0.359	0.341	2e-10
Q9Y140	326	Dehydrogenase/reductase S	no	N/A	0.535	0.435	0.342	2e-10

>sp|Q9CXR1|DHRS7_MOUSE Dehydrogenase/reductase SDR family member 7 OS=Mus musculus GN=Dhrs7 PE=2 SV=2

 Score =  120 bits (302), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 69/144 (47%), Positives = 87/144 (60%), Gaps = 2/144 (1%)

Query: 17  VQGLFLLAVDCDLYLFFIEKINKRLNY-FNNKVVWITGASSGIGEALALQLSKCGAKLVL 75
           VQ L  L  D DL L + E   +R  +   + VVW+TGASSGIGE LA QLSK G  LVL
Sbjct: 20  VQLLRFLRADADLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELAFQLSKLGVSLVL 79

Query: 76  SARSSSNLERVKNLCVQAGA-HPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
           SAR +  LERVK  C++ G    + I  L LD+T T  H     AV+Q+FG +DIL+NN 
Sbjct: 80  SARRAQELERVKRRCLENGNLKEKDILVLPLDLTDTSSHEAATKAVLQEFGKIDILVNNG 139

Query: 135 GRSQRAAWEDIELEVDRELFTYAY 158
           GRSQR+   +  L+V +EL    Y
Sbjct: 140 GRSQRSLVLETNLDVFKELINLNY 163

Mus musculus (taxid: 10090)
EC: 1EC: .EC: 1EC: .EC: -EC: .EC: -

>sp|Q9Y394|DHRS7_HUMAN Dehydrogenase/reductase SDR family member 7 OS=Homo sapiens GN=DHRS7 PE=1 SV=1

 Score =  115 bits (287), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 107/237 (45%), Gaps = 63/237 (26%)

Query: 26  DCDLYLFFIEKINKRLNY-FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE 84
           D DL L + E   +R  +   + VVW+TGASSGIGE LA QLSK G  LVLSAR    LE
Sbjct: 29  DGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRVHELE 88

Query: 85  RVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED 144
           RVK                          RRC +              N    ++     
Sbjct: 89  RVK--------------------------RRCLE--------------NGNLKEK----- 103

Query: 145 IELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW 204
                            I  L LD+T T  H     AV+Q+FG +DIL+NN G SQR+  
Sbjct: 104 ----------------DILVLPLDLTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRSLC 147

Query: 205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            D  L+V R+L ELN    +SL++    + + R+Q G +V  +SI GI+  P S  Y
Sbjct: 148 MDTSLDVYRKLIELNYLGTVSLTKCVLPHMIERKQ-GKIVTVNSILGIISVPLSIGY 203

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q5R6U1|DRS7B_PONAB Dehydrogenase/reductase SDR family member 7B OS=Pongo abelii GN=DHRS7B PE=2 SV=2

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 87/219 (39%), Gaps = 60/219 (27%)

Query: 43  YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
           Y  N VV ITGA+SG+G+  A      GAKLVL  R+                       
Sbjct: 49  YLRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRNG---------------------- 86

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
                                 G L+ LI              EL          ++P  
Sbjct: 87  ----------------------GALEELIR-------------ELTASHATKVQTHKP-- 109

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
           Y +T D+T +         ++Q FG +DIL+NNAG S R    D  ++VD+ + E N F 
Sbjct: 110 YLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETNYFG 169

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            ++L++      + R Q GH+V  SSI G +  P+  +Y
Sbjct: 170 PVALTKALLPSMIKRRQ-GHIVAISSIQGKISIPFRSAY 207

Putative oxidoreductase.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q6IAN0|DRS7B_HUMAN Dehydrogenase/reductase SDR family member 7B OS=Homo sapiens GN=DHRS7B PE=1 SV=2

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 87/219 (39%), Gaps = 60/219 (27%)

Query: 43  YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
           Y  N VV ITGA+SG+G+  A      GAKLVL  R+                       
Sbjct: 49  YLRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRNG---------------------- 86

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
                                 G L+ LI              EL          ++P  
Sbjct: 87  ----------------------GALEELIR-------------ELTASHATKVQTHKP-- 109

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
           Y +T D+T +         ++Q FG +DIL+NNAG S R    D  ++VD+ + E N F 
Sbjct: 110 YLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETNYFG 169

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            ++L++      + R Q GH+V  SSI G +  P+  +Y
Sbjct: 170 PVALTKALLPSMIKRRQ-GHIVAISSIQGKMSIPFRSAY 207

Putative oxidoreductase.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q7Q732|DHRS7_ANOGA Dehydrogenase/reductase SDR family protein 7-like OS=Anopheles gambiae GN=AGAP005532 PE=3 SV=3

 Score = 71.6 bits (174), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 66/134 (49%), Gaps = 6/134 (4%)

Query: 29  LYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN 88
           L L  + K  +   + N KVV ITGASSG+GEALA      G K+VL+AR    LERV+ 
Sbjct: 31  LKLLTMMKEQRNARHLNGKVVLITGASSGLGEALAHSFFLAGCKVVLAARRKDELERVRK 90

Query: 89  ----LCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED 144
               L      HP  I  L LD++          +V++  G +DIL+NN G S R     
Sbjct: 91  DLLELHATVPTHPPII--LPLDLSDLNSIGGKVQSVLEIHGAIDILVNNGGISVRGDALS 148

Query: 145 IELEVDRELFTYAY 158
             ++VD  +    Y
Sbjct: 149 TAIDVDIRIMLVNY 162

Putative oxidoreductase.

Anopheles gambiae (taxid: 7165)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q49117|Y182_METEA Uncharacterized oxidoreductase MexAM1_META1p0182 OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p0182 PE=3 SV=2

 Score = 68.6 bits (166), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 4/115 (3%)

Query: 41  LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQS 99
           ++    KV  +TGAS GIG A+A  L+K GA +V++ A S +  + V      AG    +
Sbjct: 1   MSKLEGKVAVVTGASKGIGAAIAKALAKDGAAVVVNYASSKAGADAVVEAITAAGGKAIA 60

Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           +     DV+Q    R   +A +QQFG LD+L+NN+G  + AA E++  E  R +F
Sbjct: 61  VQA---DVSQAVQARGLVEAAVQQFGRLDVLVNNSGVYEFAAIEEVTEEHYRRIF 112

Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) (taxid: 272630)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q92EK7|Y452_LISIN Uncharacterized oxidoreductase Lin0452 OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lin0452 PE=3 SV=1

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 62/93 (66%), Gaps = 5/93 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYT 102
             NKV+ ITGASSGIGEA A+ L++ GAKLVL+AR    LE+ V+ +   +G   ++I+ 
Sbjct: 3   IKNKVIIITGASSGIGEATAILLAEKGAKLVLAARRVEKLEKIVQTIKASSG---EAIFA 59

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            T DVT+ + +++  +  I+++G +D +  NAG
Sbjct: 60  KT-DVTKREDNKKLVELAIERYGKVDAIFLNAG 91

Listeria innocua serovar 6a (strain CLIP 11262) (taxid: 272626)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P25145|Y432_LISMO Uncharacterized oxidoreductase Lmo0432 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmo0432 PE=3 SV=2

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 62/93 (66%), Gaps = 5/93 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYT 102
             NKV+ ITGASSGIG+A AL L++ GAKLVL+AR    LE+ V+ +   +G   ++I+ 
Sbjct: 3   IKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQTIKANSG---EAIFA 59

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            T DVT+ + +++  +  I+++G +D +  NAG
Sbjct: 60  KT-DVTKREDNKKLVELAIERYGKVDAIFLNAG 91

Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) (taxid: 169963)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q99J47|DRS7B_MOUSE Dehydrogenase/reductase SDR family member 7B OS=Mus musculus GN=Dhrs7b PE=2 SV=1

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 1/117 (0%)

Query: 43  YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIY 101
           Y  N VV +TGA+SG+G   A      GAKLVL  R+   LE + + L   +       +
Sbjct: 49  YLRNAVVVVTGATSGLGRECAKVFHAAGAKLVLCGRNVKALEELSRELAGSSQGQTHQPF 108

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY 158
            +T D+            ++Q FG +D+LINNAG S R    D  ++VDR++    Y
Sbjct: 109 VVTFDLADPGTIAAAAAEILQCFGYVDVLINNAGISYRGTISDTIVDVDRKVMEINY 165

Putative oxidoreductase.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q9Y140|DHRS7_DROME Dehydrogenase/reductase SDR family protein 7-like OS=Drosophila melanogaster GN=CG7601 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 4/146 (2%)

Query: 17  VQGLFLLAVDCDLYLFFIEK---INKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKL 73
           V G  L+ V   L +  I +     K  N    KVV ITGASSG+GE+LA    + G ++
Sbjct: 21  VLGTVLMPVALPLAIINIWQRFQAQKFRNQLPGKVVLITGASSGLGESLAHVFYRAGCRV 80

Query: 74  VLSARSSSNLERVKNLCVQAGAHPQSIYT-LTLDVTQTKYHRRCFDAVIQQFGCLDILIN 132
           +L+AR +  LERVK   +     P    T L LD+ +          V+  +  +DILIN
Sbjct: 81  ILAARRTQELERVKKDLLALDVDPAYPPTVLPLDLAELNSIPEFVTRVLAVYNQVDILIN 140

Query: 133 NAGRSQRAAWEDIELEVDRELFTYAY 158
           N G S RA      ++VD ++    Y
Sbjct: 141 NGGISVRADVASTAVDVDLKVMVVNY 166

Putative oxidoreductase.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
240849613	322	dehydrogenase-like [Acyrthosiphon pisum]	0.758	0.624	0.436	5e-44
242020262	328	alcohol dehydrogenase, putative [Pedicul	0.679	0.548	0.448	6e-42
328787123	329	PREDICTED: dehydrogenase/reductase SDR f	0.754	0.607	0.375	8e-39
350406962	333	PREDICTED: dehydrogenase/reductase SDR f	0.754	0.600	0.375	2e-38
322785444	302	hypothetical protein SINV_04048 [Solenop	0.750	0.658	0.398	4e-38
307174868	325	Dehydrogenase/reductase SDR family membe	0.758	0.618	0.385	7e-37
94469002	322	dehydrogenase-like protein [Aedes aegypt	0.754	0.621	0.383	5e-36
157103795	322	short-chain dehydrogenase [Aedes aegypti	0.754	0.621	0.383	6e-36
321474507	331	hypothetical protein DAPPUDRAFT_187647 [	0.679	0.543	0.406	4e-35
312374252	833	hypothetical protein AND_16266 [Anophele	0.758	0.241	0.369	5e-35

>gi|240849613|ref|NP_001155449.1| dehydrogenase-like [Acyrthosiphon pisum] gi|239788303|dbj|BAH70840.1| ACYPI001909 [Acyrthosiphon pisum]

 Score =  184 bits (466), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/261 (43%), Positives = 137/261 (52%), Gaps = 60/261 (22%)

Query: 1   MGLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGE 60
           MG  S +GLI ++  +V  +     D DL L+F +K  + L+ F +KVVWITGASSGIGE
Sbjct: 1   MGFLSFIGLIVVLKFLVYFVLFFTSDSDLELWFYDKFKRNLDSFKDKVVWITGASSGIGE 60

Query: 61  ALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV 120
            +AL LSK GAKLVLSARS   L                         Q K H  C +  
Sbjct: 61  HIALNLSKHGAKLVLSARSKDKL------------------------YQVKNH--CIELS 94

Query: 121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFD 180
             +    DIL+                                 L +DVT    H   FD
Sbjct: 95  EGKLTANDILV---------------------------------LPMDVTNISKHNSLFD 121

Query: 181 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG 240
            VI  FG LDIL+NNAGRSQRA WEDIEL VDRELF+LNVF V++LSRIA  YF  +   
Sbjct: 122 NVISHFGKLDILVNNAGRSQRAVWEDIELGVDRELFDLNVFPVINLSRIAVRYF-NQVGS 180

Query: 241 GHLVVTSSIAGIVGAPYSGSY 261
           G LV TSSIAGI+ AP+S +Y
Sbjct: 181 GQLVATSSIAGIIPAPFSATY 201

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242020262|ref|XP_002430574.1| alcohol dehydrogenase, putative [Pediculus humanus corporis] gi|212515746|gb|EEB17836.1| alcohol dehydrogenase, putative [Pediculus humanus corporis]

 Score =  177 bits (448), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/241 (44%), Positives = 131/241 (54%), Gaps = 61/241 (25%)

Query: 22  LLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS 81
           L  VD D+ L   EK  K+L   N KV+WITGASSGIGEALA Q +K   KLV+SAR   
Sbjct: 22  LCLVDSDVRLVIAEKFGKKLGELNGKVIWITGASSGIGEALACQAAKYKVKLVISARREG 81

Query: 82  NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 141
            L+RVKN                                     CL I            
Sbjct: 82  ELQRVKN------------------------------------KCLQI------------ 93

Query: 142 WEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR 201
             + EL  D           I  L LD+T+T  H+  FD VI QF  LDILINNAGRSQR
Sbjct: 94  --NPELSPD----------DILILPLDITKTNLHKTYFDLVINQFKKLDILINNAGRSQR 141

Query: 202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           A WE++++EVDR++F+LNVF V+SLSR+A  YF  + + G + VTSS+AGIVGAPYS SY
Sbjct: 142 AIWENVDVEVDRQVFDLNVFGVISLSRLAIQYF-NKNKTGQIAVTSSLAGIVGAPYSCSY 200

Query: 262 T 262
           T
Sbjct: 201 T 201

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787123|ref|XP_395330.3| PREDICTED: dehydrogenase/reductase SDR family member 7-like [Apis mellifera]

 Score =  166 bits (421), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 135/261 (51%), Gaps = 61/261 (23%)

Query: 1   MGLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGE 60
           M L +++G++  IY ++  +    +DCD  L F EK  K +N    KVVWITGASSGIGE
Sbjct: 1   MDLLTIIGMLITIYFLIYIILPWFLDCDFCLAFYEKFGKPINSLEGKVVWITGASSGIGE 60

Query: 61  ALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV 120
            LA  L+K G KL+LS+R                             T+TK  +      
Sbjct: 61  NLAYVLAKAGCKLILSSR-----------------------------TETKLEK------ 85

Query: 121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFD 180
             +  CL        +++     DIE+                 L LD+     H   F+
Sbjct: 86  -VKTNCLQ-------KNKNLKSSDIEV-----------------LVLDILDINKHELVFN 120

Query: 181 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG 240
           ++I +FG LDIL+NNAGRSQRA WE+IEL VD+ELF+LNVFS ++LSR+   YF    + 
Sbjct: 121 SIIAKFGKLDILVNNAGRSQRAKWENIELSVDKELFDLNVFSTIALSRLVAKYFFQMNE- 179

Query: 241 GHLVVTSSIAGIVGAPYSGSY 261
           GH V+ SSIAG+   P+S +Y
Sbjct: 180 GHFVINSSIAGVTAVPFSATY 200

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406962|ref|XP_003487937.1| PREDICTED: dehydrogenase/reductase SDR family member 7-like [Bombus impatiens]

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 135/261 (51%), Gaps = 61/261 (23%)

Query: 1   MGLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGE 60
           M L +++G I +IY +V  +    +DCDL+L   EK  K  N   +KVVWITGASSGIGE
Sbjct: 1   MDLLAVIGFITIIYCLVYIICPWFLDCDLHLAIYEKFGKPTNTLRDKVVWITGASSGIGE 60

Query: 61  ALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV 120
            LA  L++ G KL+L AR  + LE+VK  C+Q                            
Sbjct: 61  HLAYVLAEAGCKLILLARREAELEKVKINCLQ---------------------------- 92

Query: 121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFD 180
                          R++     DIE+                 L L++     H    +
Sbjct: 93  ---------------RNKNLKSSDIEV-----------------LALNICDINGHESALN 120

Query: 181 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG 240
            +I +FG LDIL+NNAGRSQRA WE+I++ VD+E+F+LNVFS ++LSR+   YFL +   
Sbjct: 121 NIIAKFGKLDILVNNAGRSQRALWENIDISVDKEMFDLNVFSPIALSRLVAKYFL-KVGA 179

Query: 241 GHLVVTSSIAGIVGAPYSGSY 261
           GH V TSSIAG+   P+S +Y
Sbjct: 180 GHFVFTSSIAGVTATPFSATY 200

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322785444|gb|EFZ12115.1| hypothetical protein SINV_04048 [Solenopsis invicta]

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/261 (39%), Positives = 141/261 (54%), Gaps = 62/261 (23%)

Query: 1   MGLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGE 60
           M LF+ +GL+ ++Y  V  +F   +DCD+ L F EK  K ++    K VWITGASSGIGE
Sbjct: 1   MYLFT-IGLLVVVYYGVYLIFSFFLDCDILLAFKEKFGKPVSSLKGKTVWITGASSGIGE 59

Query: 61  ALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV 120
            LA  L+K G KL+LSAR  + LERVK                          +RC    
Sbjct: 60  HLAYVLAKAGCKLILSARRVAELERVK--------------------------KRCLK-- 91

Query: 121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFD 180
                           ++    +D+E          AY        +D+     H++ F 
Sbjct: 92  ---------------ENEHLTDDDVE----------AY-------PIDMFDFDSHQKAFQ 119

Query: 181 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG 240
            VI +FG LDIL+NNAGRSQRA WE+IEL VD+E+F+LNVFSV+SLSR+A  +F+ +  G
Sbjct: 120 HVINKFGKLDILVNNAGRSQRAKWENIELAVDKEMFDLNVFSVISLSRLAIKHFV-QLGG 178

Query: 241 GHLVVTSSIAGIVGAPYSGSY 261
           G +V TSS+AGI+  P S +Y
Sbjct: 179 GQIVNTSSLAGILPVPMSATY 199

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307174868|gb|EFN65146.1| Dehydrogenase/reductase SDR family member 7 [Camponotus floridanus]

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/262 (38%), Positives = 134/262 (51%), Gaps = 61/262 (23%)

Query: 1   MGLFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGE 60
           M  F+ +GL+ + Y I   +    +DCDL L F E   K ++    KVVWI+GASSGIGE
Sbjct: 1   MAFFATIGLLSVFYYIAYLILPSILDCDLLLRFKEIFGKPISSLKGKVVWISGASSGIGE 60

Query: 61  ALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV 120
            LA  L+K G KL+LSAR  + LE+VK                          +RC +  
Sbjct: 61  QLAYVLAKAGCKLILSARRVAELEQVK--------------------------KRCLE-- 92

Query: 121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFD 180
                            +     D ++EV                 LDV     H + F 
Sbjct: 93  -----------------ENKYLNDDDVEV---------------YPLDVLNLDLHEKAFL 120

Query: 181 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG 240
            VI +FG LDIL+NNAGRSQRA WE+I++EVDRE+FELNV S++SLSR+A  +FL +   
Sbjct: 121 HVINKFGKLDILVNNAGRSQRAQWENIQVEVDREMFELNVLSIVSLSRLAVKHFL-QTGN 179

Query: 241 GHLVVTSSIAGIVGAPYSGSYT 262
           G +V+ SS+AG   A  SGSY 
Sbjct: 180 GQIVINSSVAGFFPAIMSGSYN 201

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|94469002|gb|ABF18350.1| dehydrogenase-like protein [Aedes aegypti]

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/261 (38%), Positives = 136/261 (52%), Gaps = 61/261 (23%)

Query: 3   LFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEAL 62
            F+ V +  ++Y +V+ +  L +D D+ LF + K+ K ++    KVVWITGASSGIG  L
Sbjct: 4   FFNFVAICTILYFLVRLVLWLVLDADIELFVLSKLGKPISSLKGKVVWITGASSGIGRDL 63

Query: 63  ALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ 122
           A+ L+K G +L LSAR+ S L                     L V Q        D + Q
Sbjct: 64  AIALAKNGVRLCLSARNISEL---------------------LKVKQ--------DCIAQ 94

Query: 123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS-IYTLTLDVTQTKYHRRCFDA 181
             G L                                P+ +Y L +D+    +H   F+ 
Sbjct: 95  SNGTLG-------------------------------PNDVYVLQMDMLDVNHHNDYFNM 123

Query: 182 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGG 241
           VI  F  LDIL+NNAGRSQRA W +I ++VDRELFEL+VF+V+ LSRIA ++F+     G
Sbjct: 124 VIDHFKTLDILVNNAGRSQRAEWNNINVKVDRELFELDVFAVVHLSRIALNFFIRNSIKG 183

Query: 242 HLVVTSSIAGIVGAPYSGSYT 262
           HL VTSS AG++GAP S SYT
Sbjct: 184 HLAVTSSTAGLIGAPNSASYT 204

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157103795|ref|XP_001648134.1| short-chain dehydrogenase [Aedes aegypti] gi|108880489|gb|EAT44714.1| AAEL003959-PA [Aedes aegypti]

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/261 (38%), Positives = 136/261 (52%), Gaps = 61/261 (23%)

Query: 3   LFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEAL 62
            F+ V +  ++Y +V+ +  L +D D+ LF + K+ K ++    KVVWITGASSGIG  L
Sbjct: 4   FFNFVAICTILYFLVRLVLWLVLDADIELFVLSKLGKPISSLKGKVVWITGASSGIGRDL 63

Query: 63  ALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ 122
           A+ L+K G +L LSAR+ S L                     L V Q        D + Q
Sbjct: 64  AIALAKNGVRLCLSARNISEL---------------------LKVKQ--------DCIAQ 94

Query: 123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS-IYTLTLDVTQTKYHRRCFDA 181
             G L                                P+ +Y L +D+    +H   F+ 
Sbjct: 95  SNGTLG-------------------------------PNDVYVLQMDMLDVNHHNDYFNM 123

Query: 182 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGG 241
           VI  F  LDIL+NNAGRSQRA W +I ++VDRELFEL+VF+V+ LSRIA ++F+     G
Sbjct: 124 VIDHFKTLDILVNNAGRSQRAEWNNINVKVDRELFELDVFAVVHLSRIALNFFIRNSIKG 183

Query: 242 HLVVTSSIAGIVGAPYSGSYT 262
           HL VTSS AG++GAP S SYT
Sbjct: 184 HLAVTSSTAGLIGAPNSASYT 204

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321474507|gb|EFX85472.1| hypothetical protein DAPPUDRAFT_187647 [Daphnia pulex]

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/241 (40%), Positives = 130/241 (53%), Gaps = 61/241 (25%)

Query: 26  DCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER 85
           D DL L F+EKI  RL+    KV W+ GASSGIG+ LA QL+  GAKLV+SAR  + L+ 
Sbjct: 26  DGDLTLMFLEKIGTRLSSARGKVYWVVGASSGIGKELAFQLAAHGAKLVISARRETELKA 85

Query: 86  VKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 145
           VK                                     GCL I   NAG          
Sbjct: 86  VKA------------------------------------GCLAIG-KNAGL--------- 99

Query: 146 ELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE 205
            +E D           +  L  DVT+   H+  FD VI+ FG LD+LINN+GRSQ+A ++
Sbjct: 100 -VESD-----------VLILPFDVTKVDSHKHYFDLVIRHFGTLDVLINNSGRSQKAEFQ 147

Query: 206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY--TD 263
           +I+L+VD+ELF+ NVF +++L+R+   +FLA+ + GH+VVTSS AG  GAP S SY  T 
Sbjct: 148 NIKLKVDKELFKTNVFGLVNLTRVVLPHFLAKSK-GHIVVTSSCAGKFGAPLSSSYNATK 206

Query: 264 H 264
           H
Sbjct: 207 H 207

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374252|gb|EFR21842.1| hypothetical protein AND_16266 [Anopheles darlingi]

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 136/260 (52%), Gaps = 59/260 (22%)

Query: 3   LFSLVGLIYLIYIIVQGLFLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEAL 62
            F+ V + + +Y +V+ +    +D D+ LF + K+ K ++    KVVWITGASSGIG  L
Sbjct: 501 FFNFVAISFFVYHLVRLILWAVLDSDIELFVLSKLGKPISSLRGKVVWITGASSGIGRDL 560

Query: 63  ALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ 122
           A+ L+K G K                LC+ A    ++I  L L V Q+     C  A   
Sbjct: 561 AIALAKHGVK----------------LCISA----RNISEL-LKVKQS-----CLAA--- 591

Query: 123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAV 182
                    +N G                          +Y L +D+    +H   F+ V
Sbjct: 592 ---------SNGGLGPN---------------------DVYVLEMDMLHVNHHNDYFNMV 621

Query: 183 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGH 242
           I  F  +D+L+NNAGRSQRA W  I ++VDRELFEL+VF+V++LSR+A ++F+     GH
Sbjct: 622 IDHFKTVDVLVNNAGRSQRAEWGSINVKVDRELFELDVFAVVNLSRVALNFFVRNSLKGH 681

Query: 243 LVVTSSIAGIVGAPYSGSYT 262
           LVVTSS AG++GAP SGSYT
Sbjct: 682 LVVTSSTAGLIGAPNSGSYT 701

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
FB|FBgn0031360	321	CG31937 [Drosophila melanogast	0.498	0.411	0.437	6.6e-26
RGD|1565002	338	RGD1565002 "similar to Dehydro	0.539	0.423	0.479	6.6e-26
MGI|MGI:1913625	338	Dhrs7 "dehydrogenase/reductase	0.513	0.402	0.478	8.4e-26
UNIPROTKB|Q24K14	339	DHRS7 "Uncharacterized protein	0.539	0.421	0.465	9.7e-25
UNIPROTKB|E2QWK3	339	DHRS7 "Uncharacterized protein	0.569	0.445	0.428	1.2e-24
UNIPROTKB|H0YJ66	399	DHRS7 "Dehydrogenase/reductase	0.539	0.358	0.465	1.2e-24
UNIPROTKB|Q9Y394	339	DHRS7 "Dehydrogenase/reductase	0.539	0.421	0.465	1.2e-24
UNIPROTKB|E1BV75	336	DHRS7 "Uncharacterized protein	0.581	0.458	0.426	2.6e-24
ZFIN|ZDB-GENE-060825-21	338	dhrs7 "dehydrogenase/reductase	0.554	0.434	0.437	4.2e-24
UNIPROTKB|F1SSI2	339	DHRS7 "Uncharacterized protein	0.539	0.421	0.445	7.8e-23

FB|FBgn0031360 CG31937 [Drosophila melanogaster (taxid:7227)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 59/135 (43%), Positives = 87/135 (64%)

Query:    23 LAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN 82
             + +DC++ L++  +    L+    +VVWITGASSGIG ALAL L++ G KLVLSAR    
Sbjct:    23 ILLDCNVALWYKSRFGVSLSSMRGQVVWITGASSGIGRALALSLARHGVKLVLSARRLEQ 82

Query:    83 LERVKNLCVQAGAH---PQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR 139
             LE+V+  C+ A       + +  + +D+     H+   + V+  F  LD+L+NNAGRSQR
Sbjct:    83 LEQVQEECLAAARGLLATKDVLVIQMDMLDLDEHKTHLNTVLNHFHRLDVLVNNAGRSQR 142

Query:   140 AAWEDIELEVDRELF 154
             A+W ++E+EVDRELF
Sbjct:   143 ASWTEVEIEVDRELF 157

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|1565002 RGD1565002 "similar to Dehydrogenase/reductase SDR family member 7 precursor (Retinal short-chain dehydrogenase/reductase 4)" [Rattus norvegicus (taxid:10116)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 70/146 (47%), Positives = 88/146 (60%)

Query:    23 LAVDCDLYLFFIEKINKRLNY-FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS 81
             L  D DL L + E   +R  +   + VVWITGASSGIGE LA QLSK G  LVLSAR   
Sbjct:    26 LRADADLTLLWAEWQGRRPEWELTDMVVWITGASSGIGEELAFQLSKLGVCLVLSARRGQ 85

Query:    82 NLERVKNLCVQAG-AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 140
              LERVK  C++ G    + I  L LD+T T  H     AV+Q+FG +DIL+NN GRSQR+
Sbjct:    86 ELERVKRRCLENGNLKEKDILVLPLDLTDTSSHEAATKAVLQEFGKIDILVNNGGRSQRS 145

Query:   141 AWEDIELEVDRELFTYAYRPSIYTLT 166
                +  LEV +EL    Y  ++ +LT
Sbjct:   146 LVLETNLEVFKELMNLNYLGTV-SLT 170

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

MGI|MGI:1913625 Dhrs7 "dehydrogenase/reductase (SDR family) member 7" [Mus musculus (taxid:10090)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 66/138 (47%), Positives = 84/138 (60%)

Query:    23 LAVDCDLYLFFIEKINKRLNY-FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS 81
             L  D DL L + E   +R  +   + VVW+TGASSGIGE LA QLSK G  LVLSAR + 
Sbjct:    26 LRADADLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELAFQLSKLGVSLVLSARRAQ 85

Query:    82 NLERVKNLCVQAG-AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 140
              LERVK  C++ G    + I  L LD+T T  H     AV+Q+FG +DIL+NN GRSQR+
Sbjct:    86 ELERVKRRCLENGNLKEKDILVLPLDLTDTSSHEAATKAVLQEFGKIDILVNNGGRSQRS 145

Query:   141 AWEDIELEVDRELFTYAY 158
                +  L+V +EL    Y
Sbjct:   146 LVLETNLDVFKELINLNY 163

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q24K14 DHRS7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 68/146 (46%), Positives = 86/146 (58%)

Query:    23 LAVDCDLYLFFIEKINKRLNY-FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS 81
             L  D DL L + E   +R  +   + VVW+TGASSGIGE LA QLSK G  LVLSAR   
Sbjct:    26 LRADADLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRMH 85

Query:    82 NLERVKNLCVQAG-AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 140
              LERVK  C++ G    + I  L LD+T    H     AV+Q+FG +DIL+NN G SQRA
Sbjct:    86 ELERVKRKCLENGNLKEKDILILPLDLTDRSSHEMATKAVLQEFGRIDILVNNGGVSQRA 145

Query:   141 AWEDIELEVDRELFTYAYRPSIYTLT 166
                D  L+V +EL    Y  ++ +LT
Sbjct:   146 LCVDTSLDVFKELIELNYLGTV-SLT 170

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2QWK3 DHRS7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 66/154 (42%), Positives = 90/154 (58%)

Query:    26 DCDLYLFFIEKINKRLNY-FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE 84
             D DL L + E   +R  +   + V+W+TGASSGIGE L  QLSK G  LVLSAR    LE
Sbjct:    29 DGDLTLLWAEWQGRRPEWELTDMVIWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELE 88

Query:    85 RVKNLCVQAGA-HPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE 143
             RVK  C++ G    + I+ L LD+T    H     AV+Q+FG +DIL+NN G+SQR+   
Sbjct:    89 RVKRRCLENGILKEKDIFVLPLDLTDRSSHEAATKAVLQEFGKIDILVNNGGQSQRSLCV 148

Query:   144 DIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRR 177
             D  L+V +EL    Y  ++ +LT+ V      R+
Sbjct:   149 DTNLDVFKELMELNYLGTV-SLTMCVLPHMIERK 181

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|H0YJ66 DHRS7 "Dehydrogenase/reductase SDR family member 7" [Homo sapiens (taxid:9606)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 68/146 (46%), Positives = 87/146 (59%)

Query:    23 LAVDCDLYLFFIEKINKRLNY-FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS 81
             L  D DL L + E   +R  +   + VVW+TGASSGIGE LA QLSK G  LVLSAR   
Sbjct:    21 LRADGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRVH 80

Query:    82 NLERVKNLCVQAG-AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 140
              LERVK  C++ G    + I  L LD+T T  H     AV+Q+FG +DIL+NN G SQR+
Sbjct:    81 ELERVKRRCLENGNLKEKDILVLPLDLTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRS 140

Query:   141 AWEDIELEVDRELFTYAYRPSIYTLT 166
                D  L+V R+L    Y  ++ +LT
Sbjct:   141 LCMDTSLDVYRKLIELNYLGTV-SLT 165

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|Q9Y394 DHRS7 "Dehydrogenase/reductase SDR family member 7" [Homo sapiens (taxid:9606)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 68/146 (46%), Positives = 87/146 (59%)

Query:    23 LAVDCDLYLFFIEKINKRLNY-FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS 81
             L  D DL L + E   +R  +   + VVW+TGASSGIGE LA QLSK G  LVLSAR   
Sbjct:    26 LRADGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRVH 85

Query:    82 NLERVKNLCVQAG-AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 140
              LERVK  C++ G    + I  L LD+T T  H     AV+Q+FG +DIL+NN G SQR+
Sbjct:    86 ELERVKRRCLENGNLKEKDILVLPLDLTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRS 145

Query:   141 AWEDIELEVDRELFTYAYRPSIYTLT 166
                D  L+V R+L    Y  ++ +LT
Sbjct:   146 LCMDTSLDVYRKLIELNYLGTV-SLT 170

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|E1BV75 DHRS7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 67/157 (42%), Positives = 89/157 (56%)

Query:    23 LAVDCDLYLFFIEKINKRL-NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS 81
             L  D DL + + E   K+  N    KVVW+TGASSGIGE LA QLSK GA L +SAR   
Sbjct:    27 LRADGDLTVLWAEWRGKKPENELRGKVVWVTGASSGIGEELAYQLSKIGALLAISARRED 86

Query:    82 NLERVKNLCVQ-AGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 140
              LERVK  C+Q +    + I  L LD+T    H    ++V++ FG +D+L+NN GRSQR+
Sbjct:    87 ELERVKKKCLQISNLSDKDILVLRLDLTDRSSHEAATNSVLKHFGKIDVLVNNGGRSQRS 146

Query:   141 AWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRR 177
              + D  L+V   +    Y  +I +LT  V      RR
Sbjct:   147 LFVDTNLDVFSAIMELNYLGTI-SLTKHVLNHMIERR 182

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

ZFIN|ZDB-GENE-060825-21 dhrs7 "dehydrogenase/reductase (SDR family) member 7" [Danio rerio (taxid:7955)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 66/151 (43%), Positives = 91/151 (60%)

Query:    21 FLLAVDCDLYLFFIEKINKRL-NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS 79
             F+ A D DL L +  +  K   + F  KVVWITGASSGIGE L+LQL+  GA+LVLSAR 
Sbjct:    24 FIFA-DADLTLLWAARFGKTPESTFRGKVVWITGASSGIGEELSLQLAAIGARLVLSARR 82

Query:    80 SSNLERVKNLCVQAGA-HPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ 138
              + LERVK LC++  +   + I  L LD+     H     A ++ FG +D+LINN GRSQ
Sbjct:    83 ENELERVKRLCLERSSLKAEDILVLPLDLMDRASHPEKTTAALEHFGEIDVLINNGGRSQ 142

Query:   139 RAAWEDIELEVDRELFTYAYRPSIYTLTLDV 169
             RA   D +++V + L    Y  ++ ++T  V
Sbjct:   143 RALCVDADVDVYQALMELNYLGTV-SITKQV 172

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1SSI2 DHRS7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 65/146 (44%), Positives = 84/146 (57%)

Query:    23 LAVDCDLYLFFIEKINKRLNY-FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS 81
             L  D DL L + E   +R  +   + VVW+TGASSGIGE L  QLSK G  LVLSAR   
Sbjct:    26 LRADGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQ 85

Query:    82 NLERVKNLCVQAGA-HPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 140
              LERVK  C++ G    + I  L LD+     H     AV+Q+FG +DIL+NN G SQR+
Sbjct:    86 ELERVKRRCLENGILKGKDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRS 145

Query:   141 AWEDIELEVDRELFTYAYRPSIYTLT 166
                D  L+V +EL    Y  ++ +LT
Sbjct:   146 LCVDTSLDVYKELMEVNYLGTV-SLT 170

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	265
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-37
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	5e-26
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-25
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	4e-24
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	7e-23
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-19
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-19
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-19
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-18
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-18
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-18
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-18
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	3e-18
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	6e-18
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-17
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-17
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-17
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	3e-17
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-17
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	6e-17
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-16
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-16
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-16
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-15
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-15
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-15
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-15
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-15
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-15
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-15
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-15
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-15
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	3e-15
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	4e-15
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-15
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	6e-15
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	6e-15
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	7e-15
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	8e-15
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	9e-15
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-14
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-14
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-14
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-14
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	3e-14
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	4e-14
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	4e-14
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	5e-14
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	5e-14
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	6e-14
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	7e-14
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	8e-14
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-13
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	1e-13
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-13
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-13
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-13
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	2e-13
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	3e-13
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	5e-13
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	6e-13
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	7e-13
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	7e-13
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	7e-13
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	8e-13
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	8e-13
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	8e-13
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	8e-13
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	8e-13
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-12
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-12
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-12
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-12
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-12
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-12
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-12
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-12
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-12
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	4e-12
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	4e-12
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	5e-12
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	7e-12
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	7e-12
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	7e-12
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-11
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	1e-11
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-11
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-11
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-11
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	3e-11
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-11
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	3e-11
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	4e-11
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-11
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	5e-11
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	5e-11
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	5e-11
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	6e-11
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	7e-11
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	7e-11
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	8e-11
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	8e-11
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	8e-11
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-10
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-10
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-10
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-10
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-10
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-10
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-10
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-10
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-10
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-10
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	2e-10
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-10
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-10
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-10
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	3e-10
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-10
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	3e-10
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-10
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	3e-10
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	4e-10
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	4e-10
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	4e-10
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-10
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	5e-10
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	5e-10
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	6e-10
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	6e-10
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	6e-10
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	7e-10
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	7e-10
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	7e-10
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	8e-10
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-09
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	1e-09
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-09
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-09
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-09
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	1e-09
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	1e-09
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	1e-09
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-09
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	1e-09
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-09
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-09
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	1e-09
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-09
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-09
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-09
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-09
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	3e-09
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-09
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	3e-09
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	3e-09
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-09
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-09
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	4e-09
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	4e-09
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-09
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	6e-09
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	7e-09
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	7e-09
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	8e-09
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	8e-09
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	9e-09
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	1e-08
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-08
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	1e-08
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-08
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-08
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-08
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-08
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-08
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-08
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-08
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-08
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-08
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-08
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-08
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	3e-08
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	3e-08
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	3e-08
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	3e-08
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	3e-08
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-08
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	4e-08
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-08
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	4e-08
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	4e-08
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	5e-08
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	5e-08
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	6e-08
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	6e-08
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	6e-08
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	6e-08
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	6e-08
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	8e-08
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	8e-08
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-08
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	9e-08
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	9e-08
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-07
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-07
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-07
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-07
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	1e-07
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	1e-07
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	1e-07
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	1e-07
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-07
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-07
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-07
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	2e-07
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	2e-07
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	3e-07
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	3e-07
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	3e-07
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	3e-07
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-07
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	4e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	4e-07
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	4e-07
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	4e-07
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	4e-07
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-07
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	4e-07
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	4e-07
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	5e-07
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	5e-07
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	5e-07
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	5e-07
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	5e-07
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	6e-07
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	6e-07
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	7e-07
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	7e-07
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	8e-07
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	8e-07
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	8e-07
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	9e-07
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	9e-07
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-06
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-06
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-06
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-06
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	1e-06
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-06
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-06
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-06
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	2e-06
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-06
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	3e-06
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	3e-06
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	3e-06
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	3e-06
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	3e-06
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-06
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	3e-06
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	3e-06
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	3e-06
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	4e-06
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	4e-06
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	5e-06
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-06
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	6e-06
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	6e-06
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	8e-06
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	8e-06
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	8e-06
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	9e-06
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	9e-06
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	9e-06
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-05
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-05
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-05
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-05
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-05
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	2e-05
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-05
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-05
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-05
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-05
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-05
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	2e-05
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-05
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	3e-05
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	3e-05
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-05
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	3e-05
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-05
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	4e-05
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-05
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-05
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	4e-05
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	4e-05
PRK08862	227	PRK08862, PRK08862, short chain dehydrogenase; Pro	4e-05
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	4e-05
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	5e-05
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	5e-05
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	5e-05
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	6e-05
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	6e-05
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-05
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	7e-05
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-05
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	8e-05
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	9e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	9e-05
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-04
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	1e-04
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-04
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	1e-04
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-04
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	2e-04
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-04
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-04
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-04
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-04
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	2e-04
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	2e-04
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-04
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-04
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-04
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	3e-04
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	3e-04
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	4e-04
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	4e-04
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	4e-04
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	4e-04
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	4e-04
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	4e-04
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	4e-04
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	5e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	5e-04
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	6e-04
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	6e-04
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	7e-04
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	8e-04
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	8e-04
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	9e-04
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	9e-04
pfam08659	181	pfam08659, KR, KR domain	9e-04
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	0.001
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	0.001
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	0.001
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	0.001
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	0.001
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	0.001
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	0.001
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	0.001
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	0.001
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	0.001
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	0.001
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.001
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	0.001
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	0.002
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.002
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	0.002
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	0.002
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	0.002
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	0.002
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	0.002
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	0.002
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	0.002
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	0.002
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	0.003
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	0.003
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	0.003
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	0.003
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	0.003
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	0.003
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	0.003
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	0.004
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	0.004
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	0.004
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.004

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  132 bits (335), Expect = 1e-37
 Identities = 52/120 (43%), Positives = 74/120 (61%), Gaps = 2/120 (1%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KVV ITGASSGIGE LA  L++ GA+LVLSAR    LE VK+ C++ GA   S + +
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGA--PSPHVV 58

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            LD++  +   +  +  ++ FG LDILINNAG S R+ + D  ++VDR++    Y   + 
Sbjct: 59  PLDMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVA 118

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 5e-26
 Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 3/101 (2%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KVV ITGAS GIG ALA++L++ GA+LVL+AR+ + L  +       G        +  
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEA---LVVPT 57

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE 146
           DV+  +   R  +A + +FG +DIL+NNAG +  + ++++ 
Sbjct: 58  DVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELT 98

Length = 263

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  100 bits (251), Expect = 2e-25
 Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 1/123 (0%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + KV  ITG+SSGIG   A+  ++ GA+L L+ R +  LE  +  C+QAG   + I  +
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+T+ +   R     + +FG LDIL+NNAG   +   ED ++E   ++     R ++ 
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLR-AVI 119

Query: 164 TLT 166
            LT
Sbjct: 120 YLT 122

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 96.9 bits (242), Expect = 4e-24
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 3/106 (2%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
               ++  L LDVT  +  +     VI++FG +D+L+NNAG       E+  +E  RELF
Sbjct: 43  LLNDNLEVLELDVTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELF 102

Query: 217 ELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
           E+NVF  L ++R        R+QG G +V  SS+AG+V  P+ G Y
Sbjct: 103 EVNVFGPLRVTRAFLPLM--RKQGSGRIVNVSSVAGLVPTPFLGPY 146

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 93.4 bits (233), Expect = 7e-23
 Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 6/108 (5%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KVV ITG SSGIG ALAL L+  G +++ +AR+   LE              ++  L LD
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLES------LGELLNDNLEVLELD 54

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           VT  +  +     VI++FG +D+L+NNAG       E+  +E  RELF
Sbjct: 55  VTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELF 102

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 47/214 (21%), Positives = 81/214 (37%), Gaps = 67/214 (31%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
             +TGASSGIG A+A +L                         + GA             
Sbjct: 1   ALVTGASSGIGRAIARRL------------------------AREGAK------------ 24

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLD 168
                               +++  A R++ A  E   +E        A   +   +  D
Sbjct: 25  --------------------VVL--ADRNEEALAELAAIE--------ALGGNAVAVQAD 54

Query: 169 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSR 228
           V+  +      +  +++FG LDIL+NNAG ++    E++  E    + ++N+  V  L+R
Sbjct: 55  VSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTR 114

Query: 229 IATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            A  +   +  GG +V  SS+AG+   P   +Y 
Sbjct: 115 AALPHMKKQ-GGGRIVNISSVAGLRPLPGQAAYA 147

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 84.6 bits (210), Expect = 2e-19
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYTL 103
             K   ITGASSGIG  LA QL++ G  L+L AR    LE + K L          +  +
Sbjct: 5   KGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKEL---EDKTGVEVEVI 61

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             D++  +   R  D + ++ G +D+L+NNAG
Sbjct: 62  PADLSDPEALERLEDELKERGGPIDVLVNNAG 93

Length = 265

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 83.0 bits (206), Expect = 6e-19
 Identities = 57/219 (26%), Positives = 83/219 (37%), Gaps = 68/219 (31%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQA-GAHPQSIYT 102
              KV  +TGASSGIGE +A + +  GA++V++ R+    ERV         A  ++I  
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERV----AAEILAGGRAIA- 57

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
           +  DV+          A +++FG +DIL+NNAG                   T+   P  
Sbjct: 58  VAADVSDEADVEAAVAAALERFGSVDILVNNAG------------------TTHRNGP-- 97

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
               LDV                                      E E DR +F +NV S
Sbjct: 98  ---LLDVD-------------------------------------EAEFDR-IFAVNVKS 116

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
               ++ A       E GG +V  +S AG+   P  G Y
Sbjct: 117 PYLWTQAAVPAMRG-EGGGAIVNVASTAGLRPRPGLGWY 154

Length = 251

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 82.2 bits (203), Expect = 1e-18
 Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 6/115 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS--SNLERVKNLCVQAGAHPQSIY 101
            + KV  +TGASSGIG A+A  L++ GA++V++AR S     E +     +AG       
Sbjct: 3   LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGR--AA 60

Query: 102 TLTLDVTQTKY-HRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELF 154
            +  DV+  +        A  ++FG +DIL+NNAG +   A  E++  E    + 
Sbjct: 61  AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVI 115

Length = 251

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 84.2 bits (209), Expect = 2e-18
 Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 6/106 (5%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KVV ITGASSGIG A A+++++ GA + L AR   N E +  L  +  A   + +  T 
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVAR---NGEALDELVAEIRAKGGTAHAYTC 427

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
           D+T +         ++ + G +D L+NNAGRS R +   +E   DR
Sbjct: 428 DLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRS---VENSTDR 470

Length = 657

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 81.1 bits (201), Expect = 3e-18
 Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 10/112 (8%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             KV  ITGASSGIGEA A  L++ GAK+VL+AR     ER++ L  + GA   +   L 
Sbjct: 5   KGKVALITGASSGIGEATARALAEAGAKVVLAAR---REERLEALADEIGA--GAALALA 59

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG-----RSQRAAWEDIELEVDR 151
           LDVT         +A+ ++FG +DIL+NNAG         A  +D +  +D 
Sbjct: 60  LDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDT 111

Length = 246

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 81.0 bits (201), Expect = 3e-18
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              K   +TGAS GIG A+AL+L+  GAK+V+   +    E +      AG        L
Sbjct: 3   LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGG---EARVL 59

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             DV+     R   +A ++ FG LDIL+NNAG ++ A    +  E
Sbjct: 60  VFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEE 104

Length = 246

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 80.8 bits (200), Expect = 3e-18
 Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K V ITGASSGIGEA A + +K GAKL+L+ R +  L+ + +        P  +  L LD
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGA--KFPVKVLPLQLD 58

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVD 150
           V+  +      + + ++F  +DIL+NNAG       +Q A  ED E  +D
Sbjct: 59  VSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMID 108

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 80.0 bits (198), Expect = 6e-18
 Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN-LCVQAGAHPQSIYTLTL 105
           K V ITG SSGIG+ALA +L K GA +++ ARS S LE     +  +A A  Q +  ++ 
Sbjct: 2   KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISA 61

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           D++  +   + F   +++ G  D+++N AG S    +ED+  E
Sbjct: 62  DLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAE 104

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 79.2 bits (196), Expect = 1e-17
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 7/96 (7%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
               ITGASSGIG+A AL  +K G  L L ARS   LE +       G         ++D
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGV---KAAAYSID 63

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW 142
           ++  +        +++QFGC D+LINNAG     A+
Sbjct: 64  LSNPEAIAPGIAELLEQFGCPDVLINNAG----MAY 95

Length = 241

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 78.9 bits (195), Expect = 1e-17
 Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 6/106 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYT 102
              KV  ITG S GIG A+A  L   G K+ ++AR    LE     L  +          
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLG----- 58

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           L  DV      +R  DA++  FG LD+LI NAG    A  E++  E
Sbjct: 59  LAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPE 104

Length = 237

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 79.2 bits (196), Expect = 2e-17
 Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 3/91 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           N KV  ITGASSGIG A A   ++ GAK+V+ AR  + L+++       G    +   L 
Sbjct: 5   NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVA---LA 61

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            DV    Y +      +++FG LDI  NNAG
Sbjct: 62  GDVRDEAYAKALVALAVERFGGLDIAFNNAG 92

Length = 254

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 78.4 bits (194), Expect = 3e-17
 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 6/110 (5%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
            +K V +TGAS GIG+ALA  L+  GA+L+L  R++  LE +         +P     + 
Sbjct: 4   KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALA----ARLPYPGRHRWVV 59

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE-VDREL 153
            D+T     R    A  ++ G +++LINNAG +  A  ED + E ++R L
Sbjct: 60  ADLTSEA-GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLL 108

Length = 263

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 78.0 bits (193), Expect = 4e-17
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 3/105 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              +V  +TGA+ GIG A+A++L+  GA++++      +      L   AG         
Sbjct: 4   LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG---KARAR 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            +DV      +    A ++ FG LDIL+ NAG      + +++ E
Sbjct: 61  QVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDE 105

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 77.4 bits (191), Expect = 6e-17
 Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 3/102 (2%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TGAS GIG  +A  L++ GA +V+++R+    E  + L  + G         T D
Sbjct: 6   KVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEG---VEATAFTCD 62

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           V+  +  +   +A+ + FG +DIL+NNAG  +R   E+    
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEA 104

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 76.0 bits (187), Expect = 2e-16
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 10/118 (8%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  KVV +TGA+ GIG  +A +L+  GA+++L  RS    E +  +     A     +  
Sbjct: 2   FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVLAEILAAGDA----AHVH 57

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS------QRAAWEDIELEVDRELFT 155
           T D+      +    A +++FG +D+LINN G +      +    E IE E+ R LF 
Sbjct: 58  TADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFP 115

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 76.2 bits (188), Expect = 2e-16
 Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KV  +T ASSGIG A+A  L++ GA++ + AR+  NLER  +     GA   ++     
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAV---VA 57

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
           D+T  +   R  +     FG +DIL+NNAG      +     E+  E +  A+ 
Sbjct: 58  DLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPF----AELTDEDWLEAFD 107

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.7 bits (184), Expect = 5e-16
 Identities = 53/218 (24%), Positives = 77/218 (35%), Gaps = 66/218 (30%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             K   ITGA  GIG A+A+ L+K G  + L AR+  NL+ V       G     +   T
Sbjct: 6   QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGV---KVVIAT 62

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
            DV+  +      + +  + G +DILINNAG                             
Sbjct: 63  ADVSDYEEVTAAIEQLKNELGSIDILINNAG----------------------------- 93

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
                             I +FG    L         A WE I         ++N+  V 
Sbjct: 94  ------------------ISKFGKFLEL-------DPAEWEKI--------IQVNLMGVY 120

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             +R      + R Q G ++  SS AG  GA  + +Y+
Sbjct: 121 YATRAVLPSMIER-QSGDIINISSTAGQKGAAVTSAYS 157

Length = 239

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.1 bits (183), Expect = 1e-15
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 8/114 (7%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVK---NLCVQAGAHPQSI 100
              KV  +TGAS GIG A+A  L+K GAK+V++     N E  +       + G    ++
Sbjct: 3   LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYD--INEEAAQELLEEIKEEGGDAIAV 60

Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
                DV+  +      + ++++FG +DIL+NNAG S      D+  E    + 
Sbjct: 61  KA---DVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVI 111

Length = 247

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.7 bits (182), Expect = 1e-15
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYT 102
              +V  +TGA+ G+G A+AL+L++ GA +V+  RS     E +       G   +    
Sbjct: 4   LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALG---RRAQA 60

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           +  DVT          A +++FG +DIL+NNAG  +     D+  +
Sbjct: 61  VQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDD 106

Length = 249

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE-LEVDRELFELNVFSVLSL 226
           DV+  +   R  +A + +FG +DIL+NNAG +  + ++++  L V   +  +N    +  
Sbjct: 58  DVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYC 117

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +  A  +  A    G +VV SS+AG+ G P    Y
Sbjct: 118 THAALPHLKASR--GQIVVVSSLAGLTGVPTRSGY 150

Length = 263

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 9/110 (8%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             KV  +TGASSGIG+A A +L+  G  +  +AR    ++++++L    G HP     L+
Sbjct: 2   QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR---VDKMEDL-ASLGVHP-----LS 52

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           LDVT     +   D +I + G +D+L+NNAG     A ED+ ++  R  F
Sbjct: 53  LDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQF 102

Length = 273

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 3/91 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
            +KV+ ITG + G+G A+A  L++ GAKL L   +   LE     C   G   +      
Sbjct: 4   KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGY---A 60

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            +VT  +     F  + + FG L+ LINNAG
Sbjct: 61  ANVTDEEDVEATFAQIAEDFGQLNGLINNAG 91

Length = 253

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 11/110 (10%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           N+KV  +TGASSGIG A A +L++ G ++  ++R   N  R   +          +  L 
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSR---NPARAAPI--------PGVELLE 51

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           LDVT     +   D VI + G +D+L+NNAG     A E+  +   + LF
Sbjct: 52  LDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALF 101

Length = 270

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 72.9 bits (180), Expect = 2e-15
 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 12/111 (10%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYT 102
              KV  +TGAS GIG A+A +L+  GA +V++  SS    E +       G        
Sbjct: 3   LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALG---GKALA 59

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
           +  DV+  +   R  D    +FG +DIL+NNAG        R +   W+ +
Sbjct: 60  VQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRV 110

Length = 248

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           V ITGASSGIG ALA + +K G  + L+AR     +R+  L  +      S+    LDVT
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAAR---RTDRLDELKAELLNPNPSVEVEILDVT 57

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
             + ++     +  + G LD++I NAG  +  +  D+  +  RE  
Sbjct: 58  DEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETI 103

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 3e-15
 Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 3/109 (2%)

Query: 154 FTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 213
               Y   +  L LDVT         +  ++ FG LDI++NNAG       E++     R
Sbjct: 43  LAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEAR 102

Query: 214 ELFELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
              + N F  L +++    Y   REQ  GH++  SSI GI   P SG Y
Sbjct: 103 AQIDTNFFGALWVTQAVLPYL--REQRSGHIIQISSIGGISAFPMSGIY 149

Length = 275

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 72.6 bits (179), Expect = 3e-15
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
            ++++ +TGA  GIG   AL  ++ GA ++L  R+   LE V +    AG    +I  L 
Sbjct: 11  KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLD 70

Query: 105 LDVTQTKYHRRCFDAVI-QQFGCLDILINNAG 135
           L  T T  + +     I +QFG LD +++NAG
Sbjct: 71  LL-TATPQNYQQLADTIEEQFGRLDGVLHNAG 101

Length = 247

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 72.7 bits (179), Expect = 4e-15
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 10/117 (8%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  KVV +TGA+ GIG  +AL+ +  GA++VL  RS    E V  +  +  A       L
Sbjct: 6   FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS----ELVHEVAAELRAAGGEALAL 61

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA------AWEDIELEVDRELF 154
           T D+      +    A ++ FG +D+LINN G +  A        E IE E+ R LF
Sbjct: 62  TADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLF 118

Length = 260

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 72.2 bits (178), Expect = 4e-15
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TGAS GIG A+AL+L+  GAK+ ++ RS    E       +  A   +   L  D
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSE---EAAAETVEEIKALGGNAAALEAD 57

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           V+  +      + V  +FG +DIL+NNAG
Sbjct: 58  VSDREAVEALVEKVEAEFGPVDILVNNAG 86

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 71.9 bits (177), Expect = 6e-15
 Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
             KV  +TGAS GIG A+A +L++ GA +V++ A S +  E V      AG    ++   
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA- 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI-ELEVDR 151
             DV+      R FDA  + FG +DIL+NNAG   +    +  E E DR
Sbjct: 61  --DVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDR 107

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 71.8 bits (177), Expect = 6e-15
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             KV  +TGA+SGIG  +AL L+K GAK+V++  +            +AG   ++I  + 
Sbjct: 3   KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGG--KAIG-VA 59

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +DVT  +      D  ++ FG +DIL+NNAG
Sbjct: 60  MDVTDEEAINAGIDYAVETFGGVDILVNNAG 90

Length = 258

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 73.7 bits (182), Expect = 7e-15
 Identities = 44/215 (20%), Positives = 71/215 (33%), Gaps = 66/215 (30%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TGA+ GIG+A A +L                           GA           
Sbjct: 423 KVALVTGAAGGIGKATAKRL------------------------AAEGAC---------- 448

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLT 166
                        V+      D+   +   ++ AA E                     + 
Sbjct: 449 -------------VV----LADL---DEEAAEAAAAE------------LGGPDRALGVA 476

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
            DVT     +  F+     FG +DI+++NAG +     E+   E  R  F++N      +
Sbjct: 477 CDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLV 536

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +R A     A+  GG +V  +S   +   P  G+Y
Sbjct: 537 AREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAY 571

Length = 681

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 71.5 bits (176), Expect = 8e-15
 Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 3/104 (2%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             K   +TGA+ G+G A A  L++ GA +  +   ++    +      AG      + + 
Sbjct: 6   AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGR---AHAIA 62

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            D+      +R FDA     G LD L+NNAG +   +  +++++
Sbjct: 63  ADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDID 106

Length = 250

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 71.6 bits (176), Expect = 9e-15
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 22/113 (19%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER----------VKNLCVQAGA 95
            KV  +TGASSGIG+A+A++L+  GA +V++ RS  +              K + VQA  
Sbjct: 3   GKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA-- 60

Query: 96  HPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
                     DV++ +     F + I++FG LDIL+NNAG    A+  ++ LE
Sbjct: 61  ----------DVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLE 103

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 3/112 (2%)

Query: 151 RELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 210
           R     A  P +  L LDVT     +   D VI + G +D+L+NNAG     A E+  + 
Sbjct: 36  RNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIA 95

Query: 211 VDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVT-SSIAGIVGAPYSGSY 261
             + LF+ NVF +L ++R    +   R QG   ++  SS+ G + APY   Y
Sbjct: 96  QAQALFDTNVFGILRMTRAVLPHM--RAQGSGRIINISSVLGFLPAPYMALY 145

Length = 270

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 71.3 bits (175), Expect = 2e-14
 Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 30/117 (25%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG----AHP----- 97
           K + +TGASSGIGEA A Q ++ GA +V  AR    L+ V +   +AG    A P     
Sbjct: 41  KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD 100

Query: 98  -QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-------WEDIE 146
             ++  L  DV              ++ G +DILINNAGRS R         W D+E
Sbjct: 101 LDAVDALVADVE-------------KRIGGVDILINNAGRSIRRPLAESLDRWHDVE 144

Length = 293

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 70.5 bits (173), Expect = 2e-14
 Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 23/124 (18%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN------------LERVKNLCVQ 92
           + KV ++TGAS GIG A+AL+L+K GA +V++A+++S             +E        
Sbjct: 2   SGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEA 61

Query: 93  AG--AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVD 150
           AG  A P     + +DV      R   +A + QFG LDIL+NNAG    A W  +  +  
Sbjct: 62  AGGQALP-----IVVDVRDEDQVRALVEATVDQFGRLDILVNNAG----AIWLSLVEDTP 112

Query: 151 RELF 154
            + F
Sbjct: 113 AKRF 116

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.9 bits (172), Expect = 3e-14
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%)

Query: 179 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE 238
            + ++++FG +DIL+NNAG S      D+  E    + ++N+  V+ L+R A  Y + R 
Sbjct: 74  VEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR- 132

Query: 239 QGGHLVVTSSIAGIVGAP----YSGS 260
           + G +V  SSI G++GA     YS S
Sbjct: 133 KSGVIVNISSIWGLIGASCEVLYSAS 158

Length = 247

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 8/113 (7%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAH--PQSIYT 102
           N K+  +TGASSG G    L+L+K G  ++ + R   N E+ +NL  QA      Q+I  
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMR---NPEKQENLLSQATQLNLQQNIKV 58

Query: 103 LTLDVT-QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
             LDVT Q   H   F  V+++ G +D+L+NNAG +     E+I +E  R+ F
Sbjct: 59  QQLDVTDQNSIHN--FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQF 109

Length = 280

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 70.0 bits (172), Expect = 4e-14
 Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
                +  +  D++  +   R  D + ++ G +D+L+NNAG      + ++ L+ + E+ 
Sbjct: 53  KTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMI 112

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +LN+ ++  L++      + R   GH++   S AG++  PY   Y
Sbjct: 113 QLNILALTRLTKAVLPGMVERGA-GHIINIGSAAGLIPTPYMAVY 156

Length = 265

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 69.8 bits (171), Expect = 4e-14
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT 110
           +TG+S GIG ALA  L++ GA+++L+ R  + L               S + L  DVT  
Sbjct: 15  VTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAE---SLKGQGLSAHALAFDVTDH 71

Query: 111 KYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED 144
              R   DA   + G +DIL+NNAG   R   ED
Sbjct: 72  DAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLED 105

Length = 255

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 68.9 bits (169), Expect = 5e-14
 Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 3/107 (2%)

Query: 48  VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV 107
           VV ITGASSGIG A AL  ++ GAK+VL+ARS+  L  +     + G   ++I  +  DV
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGG--EAIAVVA-DV 58

Query: 108 TQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
                  R  D  +++FG +D  +NNAG +    +ED+  E  R +F
Sbjct: 59  ADAAQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVF 105

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 69.3 bits (170), Expect = 5e-14
 Identities = 55/225 (24%), Positives = 76/225 (33%), Gaps = 79/225 (35%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  ITG +SGIG A A  L K GAK+ +  R   N        +QA         +  D
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDR---NENPGAAAELQAINPKVKATFVQCD 57

Query: 107 VT----QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDIELEVDRELFTYAYRPS 161
           VT            F   I++FG +DILINNAG     ++    +L    E         
Sbjct: 58  VTSWEQLAAA----FKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWE--------- 104

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
               T+DV                                                 N+ 
Sbjct: 105 ---KTIDV-------------------------------------------------NLT 112

Query: 222 SVLSLSRIATSYFLAREQG--GHLVVTSSIAGIVGAP----YSGS 260
            V++ + +A  Y    + G  G +V   S+AG+  AP    YS S
Sbjct: 113 GVINTTYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSAS 157

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 69.3 bits (170), Expect = 6e-14
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + KV  +TG +SGIG A+A   +  GA++ L  RS    E V    V A     +   L
Sbjct: 13  LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS----EDVAE--VAAQLLGGNAKGL 66

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             DV+ ++       AVI  FG +DIL+N+AG +  A  ED+  E
Sbjct: 67  VCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEE 111

Length = 255

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 69.0 bits (169), Expect = 7e-14
 Identities = 48/218 (22%), Positives = 79/218 (36%), Gaps = 70/218 (32%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN-LCVQAGAHPQSIYTL 103
           + +   ITGAS GIG A+A +    GA +++ AR +  L + ++ L  +       ++ L
Sbjct: 8   DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPERE--VHGL 65

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DV+  +  R   D V   +  L IL+NNAG + R A                      
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKA---------------------- 103

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
              +D T+ ++       + +                                  N+FS 
Sbjct: 104 --AIDYTEDEW-----RGIFE---------------------------------TNLFSA 123

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPY 257
             LSR A    L +     +V   S++G+     GAPY
Sbjct: 124 FELSRYAHP-LLKQHASSAIVNIGSVSGLTHVRSGAPY 160

Length = 257

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 68.9 bits (169), Expect = 8e-14
 Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 6/105 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              K V ITGAS GIG A A   +  G  L L AR +  LE +        AH   +   
Sbjct: 5   LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADL--RAAHGVDVAVH 62

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            LD++         + +  + G +DIL+NNAG       +D++  
Sbjct: 63  ALDLSSP----EAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDA 103

Length = 259

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 69.6 bits (171), Expect = 1e-13
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             +VV ITGAS+G+G A A   ++ GAK+VL AR    LE +      AG    ++    
Sbjct: 7   GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVA-- 64

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF--TY 156
            DV   +  +   D   ++ G +D  +NNA  +    +ED+  E  R +   TY
Sbjct: 65  -DVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTY 117

Length = 334

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ-SIYTLTLDV 107
           V+ITGASSGIG+ALA + ++ GA L L AR +  L+       +     + S+Y    DV
Sbjct: 5   VFITGASSGIGQALAREYARQGATLGLVARRTDALQA---FAARLPKAARVSVY--AADV 59

Query: 108 TQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE-LEVDRELF 154
                        I   G  D++I NAG S     E+ E L V RE+ 
Sbjct: 60  RDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVM 107

Length = 257

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 43  YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
            +  +V  +TGAS GIG A+A  L + G K+V  AR    +E +   C  AG    +++ 
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGY--PTLFP 60

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
              D++  +     F A+  Q   +D+ INNAG
Sbjct: 61  YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAG 93

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 11/114 (9%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
            N V+ ITG +SGIG ALA +  + G  ++++ R    L   K         P +I+T+ 
Sbjct: 5   GNTVL-ITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAK------KELP-NIHTIV 56

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELE-VDRELFT 155
           LDV   +      +A++ ++  LDILINNAG  R         +L+  D E+ T
Sbjct: 57  LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDT 110

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KVV ITG SSG+G+A+A + ++ GA +V++ R+   LE  K    Q       + T+ +
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQ---VLTVQM 57

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNA 134
           DV   +  ++  + + ++FG +D LINNA
Sbjct: 58  DVRNPEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 58/225 (25%), Positives = 83/225 (36%), Gaps = 84/225 (37%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAH--PQSIYTLT 104
           K + ITGA SG G  +AL+L++ G                    V AG    PQ +  L 
Sbjct: 3   KTILITGAGSGFGREVALRLARKGH------------------NVIAGVQIAPQ-VTALR 43

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
            +  +                         G + R    D+   +DR             
Sbjct: 44  AEAAR------------------------RGLALRVEKLDLTDAIDRA----------QA 69

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
              DV                    D+L+NNAG  +  A  DI +E+ RELFE NVF  L
Sbjct: 70  AEWDV--------------------DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPL 109

Query: 225 SLSRIATSYFLA---REQGGHLVVTSSIAGIVGAPYSGSY--TDH 264
            L    T  F+        G +V TSS+AG++  P++G+Y  + H
Sbjct: 110 EL----TQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKH 150

Length = 257

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 67.5 bits (165), Expect = 3e-13
 Identities = 28/102 (27%), Positives = 61/102 (59%), Gaps = 6/102 (5%)

Query: 41  LNYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
           +++F+   KV  +TG ++G+G+  A+ L+K GA ++++    +N +  + L  + G   +
Sbjct: 8   MDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITT-HGTNWDETRRLIEKEG---R 63

Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 140
            +  + +D+T+ +   +     +++FG +DIL+NNAG  +RA
Sbjct: 64  KVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRA 105

Length = 258

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 66.5 bits (163), Expect = 5e-13
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
                  +DV      +    A ++ FG LDIL+ NAG      + +++ E    + ++N
Sbjct: 55  GKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVN 114

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAG-IVGAPYSGSY 261
           +     L++ A    L R  GG +V+TSS+AG  VG P    Y
Sbjct: 115 LTGTFLLTQAALPA-LIRAGGGRIVLTSSVAGPRVGYPGLAHY 156

Length = 251

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 66.1 bits (162), Expect = 6e-13
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)

Query: 48  VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV 107
           +V ITG  SGIG  LAL+ +K GAK+V+   +    E   N   +AG     ++    DV
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGG---KVHYYKCDV 57

Query: 108 TQTKYHRRCFDAVIQQFGCLDILINNAG 135
           ++ +        + ++ G + ILINNAG
Sbjct: 58  SKREEVYEAAKKIKKEVGDVTILINNAG 85

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 7e-13
 Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 4/102 (3%)

Query: 161 SIYTLTLDVT-QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
           +I    LDVT Q   H   F  V+++ G +D+L+NNAG +     E+I +E  R+ FE N
Sbjct: 55  NIKVQQLDVTDQNSIHN--FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETN 112

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           VF  +S+++    Y + +++ G ++  SSI+G VG P    Y
Sbjct: 113 VFGAISVTQAVLPY-MRKQKSGKIINISSISGRVGFPGLSPY 153

Length = 280

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 66.1 bits (162), Expect = 7e-13
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQ-AGAHPQSIYT 102
              KV +ITG  +GIG+A+A   ++ GA + ++ R     E ++    + + A     + 
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGR---KPEVLEAAAEEISSATGGRAHP 57

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +  DV   +      D  +++FG +DILINNA 
Sbjct: 58  IQCDVRDPEAVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 66.0 bits (161), Expect = 7e-13
 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 3/89 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TGASSGIGEA A  L+  GA + ++AR    LE + +     G        L LD
Sbjct: 4   KVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGK---ALVLELD 60

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           VT  +      +  ++  G LDIL+NNAG
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAG 89

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 8e-13
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 8/112 (7%)

Query: 39  KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
             L   +   V +TG +SGIG A+A   ++ GA++ +   S + L         A   P 
Sbjct: 4   DLLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAAT------AARLPG 57

Query: 99  SIYTLTL-DVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELE 148
           +  T T+ DV       R FD  +++FG LD+L+NNAG        ++I  E
Sbjct: 58  AKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPE 109

Length = 264

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 65.7 bits (161), Expect = 8e-13
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
             +TGAS GIG A+AL+L+K GAK++++ RSS   E  + +  +  A+      +  DV+
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE--EGAEEVVEELKAYGVKALGVVCDVS 58

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAG 135
             +  +   + + ++ G +DIL+NNAG
Sbjct: 59  DREDVKAVVEEIEEELGPIDILVNNAG 85

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 65.6 bits (160), Expect = 8e-13
 Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 6/89 (6%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K   +TGAS GIGEA A  L   G ++ + AR  + L          G        L  D
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQ-ELEGVLG-----LAGD 54

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           V      RR  DA+ + FG LD L+NNAG
Sbjct: 55  VRDEADVRRAVDAMEEAFGGLDALVNNAG 83

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 8e-13
 Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 9/116 (7%)

Query: 39  KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
            RL     KV  +TGA+SGIGEA+A +    GA++V++        R +   ++ G    
Sbjct: 2   MRLQ---GKVALLTGAASGIGEAVAERYLAEGARVVIADI---KPARARLAALEIGPA-- 53

Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
               ++LDVT+     R   A +++FG +DIL NNA     A   DI  +    LF
Sbjct: 54  -AIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLF 108

Length = 257

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 8e-13
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 7/104 (6%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG--AHPQSIYTLT 104
           K   +TG S G+G  +A  L + GA++VLSAR +  LE         G  A       + 
Sbjct: 13  KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALW-----IA 67

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            DV       R  +  +++FG +DIL+NNAG +  A  ED  +E
Sbjct: 68  ADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVE 111

Length = 259

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 65.7 bits (161), Expect = 1e-12
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KVV ITGA+SGIG+  A +L+K GA ++++ R+    E       +       +  + LD
Sbjct: 2   KVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKET-GNAKVEVIQLD 60

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE 146
           ++     R+  +  + +F  LDILINNAG          +
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKD 100

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 65.7 bits (161), Expect = 1e-12
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  ITG    +G A+A +L++ GAK+ +  R+    E V      AG    ++   
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            LD    +  R     +++ FG  DILIN AG
Sbjct: 68  VLDKESLEQAR---QQILEDFGPCDILINGAG 96

Length = 278

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 65.7 bits (160), Expect = 1e-12
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + K   ITG++ GIG A A    + GA++ ++     NLE  +    + G        +
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIA---DINLEAARATAAEIGPAA---CAI 54

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
           +LDVT      RC  A++ ++G +DIL+NNA     A   DI  E    LF      +++
Sbjct: 55  SLDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLF 114

Query: 164 TL 165
            +
Sbjct: 115 MM 116

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 65.4 bits (160), Expect = 1e-12
 Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 12/111 (10%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ-SIYTLTL 105
           +V  +TG SSGIG A    L + GA + +  R    L   +         P   +     
Sbjct: 9   RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARL--REKFPGARLLAARC 66

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRS--------QRAAWEDIELE 148
           DV           AV  +FG +D+L+NNAG+            AW D ELE
Sbjct: 67  DVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRD-ELE 116

Length = 265

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 3/98 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K   +TGA+SGIG A+A  L+  GA +V++       E    +   AG     IY L  D
Sbjct: 2   KTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSV--IY-LPAD 58

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED 144
           VT+         A   +FG LDIL+NNAG    A  E+
Sbjct: 59  VTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEE 96

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TGAS GIG  +A  L++ G ++ L  R+  +L  +      +G   +++     D
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALS----ASGGDVEAVP---YD 53

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
               +  R   DA+  +FG +D+L++NAG  +     +         F
Sbjct: 54  ARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHF 101

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +  VV ITGASSGIG+A A   ++ GA+LVL+AR    L+ V   C   GA    + T  
Sbjct: 6   HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPT-- 63

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            DVT     +          G +D+ +NN G      +E+  +E
Sbjct: 64  -DVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIE 106

Length = 330

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  +TGASSG+G   A  L++ GAK+VL++R    +ER+K L  +  A   + + +
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRR---VERLKELRAEIEAEGGAAHVV 63

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 145
           +LDVT  +  +        + G +DIL+NN+G S      D+
Sbjct: 64  SLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDV 105

Length = 258

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 4e-12
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 12/92 (13%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+ K V +TGASSGIG A A+ L++ GA++V +AR+++ L+R   L  + G  P     L
Sbjct: 7   FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDR---LAGETGCEP-----L 58

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            LDV      R    A     G  D L+N AG
Sbjct: 59  RLDVGDDAAIRAALAA----AGAFDGLVNCAG 86

Length = 245

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 4e-12
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 4/93 (4%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             +V  +TGA SGIG A A   ++ GA++V++ R +   ERV       G      +   
Sbjct: 4   AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG----RAFARQ 59

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 137
            DV   +      D V  ++G LD+L+NNAG  
Sbjct: 60  GDVGSAEAVEALVDFVAARWGRLDVLVNNAGFG 92

Length = 252

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 63.9 bits (156), Expect = 4e-12
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 2/119 (1%)

Query: 143 EDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 202
           E+      +E+    Y      +  DVT         D  +++FG  D+++NNAG +   
Sbjct: 37  EEAAKSTIQEISEAGYN--AVAVGADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPIT 94

Query: 203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
               I  E  ++++ +NVF VL   + A   F     GG ++  SSIAG+ G P  G+Y
Sbjct: 95  PLLTITEEDLKKVYAVNVFGVLFGIQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAY 153

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 5e-12
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KVV +TGA+ GIG  LA +L   GAKL L     + L  +             + T+  
Sbjct: 9   GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAEL----GGDDRVLTVVA 64

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DVT     +   +  +++FG +D+++ NAG
Sbjct: 65  DVTDLAAMQAAAEEAVERFGGIDVVVANAG 94

Length = 296

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 63.4 bits (155), Expect = 7e-12
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KVV ++G   G+G  LA++ ++ GA +VL+AR++  L+ V       G    ++ T   D
Sbjct: 6   KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPT---D 62

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNA 134
           +T            +++FG +D L+NNA
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNA 90

Length = 258

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 63.6 bits (155), Expect = 7e-12
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTL 103
             KVV ITG S+G+G A+A++  K  AK+V++ RS       V     +AG    ++   
Sbjct: 6   EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG- 64

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             DVT            +++FG LD++INNAG        ++ LE
Sbjct: 65  --DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLE 107

Length = 261

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 63.1 bits (153), Expect = 7e-12
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 2/92 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            N KV  +TG + GIG+A+ + L++ GAK+V++  SS   E  +NL  + G     +Y +
Sbjct: 4   LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSK--EAAENLVNELGKEGHDVYAV 61

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV++ +   R  +  +  FG +DIL+NNAG
Sbjct: 62  QADVSKVEDANRLVEEAVNHFGKVDILVNNAG 93

Length = 247

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           + K   ITG SSG G ALA      G ++V + RS +     + L      HP       
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL------HPDRALARL 56

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           LDVT               FG +D+L+NNAG     A E+  L   R  F
Sbjct: 57  LDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQF 106

Length = 277

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 62.9 bits (153), Expect = 1e-11
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             NKV  ITG +  +G A+A  L++ GAK+    R   N E+   +  +  A       L
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGR---NQEKGDKVAKEITALGGRAIAL 59

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE 146
             DV       R  + ++ QFG +DILIN AG +   A  D E
Sbjct: 60  AADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPE 102

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 13/105 (12%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             KV  +TG ++ IG A+A  L   GA++ +    + N   V      A +  +    + 
Sbjct: 5   AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAV------AASLGERARFIA 58

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG-------RSQRAAW 142
            D+T      R    V+ +FG +DIL+N A         S RA W
Sbjct: 59  TDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADW 103

Length = 261

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           L  D+   +     F  +  + G LDIL+NN G   R    +++    R L E ++ + +
Sbjct: 65  LAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPI 124

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            LSR+A    + R+  G ++  +SIAG V       Y 
Sbjct: 125 LLSRLAAQR-MKRQGYGRIIAITSIAGQVARAGDAVYP 161

Length = 256

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 1/104 (0%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             KV  +TG++SGIG  +A  L+  GA +VL+    +         + A    + +Y   
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLY-HG 59

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            D+++            +QFG +DIL+NNAG    A  ED   E
Sbjct: 60  ADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTE 103

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 3e-11
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KV  +TGA+ GIG A+A   ++ GA + L+   ++  ER     +        +  +  
Sbjct: 7   GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAA-AIARDVAGARVLAVPA 65

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGR 136
           DVT          A  + FG LD+L+NNAG 
Sbjct: 66  DVTDAASVAAAVAAAEEAFGPLDVLVNNAGI 96

Length = 260

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 32/100 (32%), Positives = 59/100 (59%), Gaps = 5/100 (5%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             KV  +TGA++G+G+ +A+ L++ GA +V + RS  +  +      Q  A  +   +LT
Sbjct: 4   EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQ-----QVEALGRRFLSLT 58

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED 144
            D++  +  +   D+ +++FG +DIL+NNAG  +RA  E+
Sbjct: 59  ADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEE 98

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 61.4 bits (149), Expect = 3e-11
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K   ITGA  GIGE +A   ++ GA L+L   S    +    LC   G    ++     D
Sbjct: 7   KTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELC-GRGHRCTAV---VAD 62

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDREL 153
           V              ++ G +DIL+NNAG  +  ++ D+  E DR+ 
Sbjct: 63  VRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDE-DRDF 108

Length = 263

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 1/97 (1%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
             LDVT               FG +D+L+NNAG     A E+  L   R  FE+NVF  +
Sbjct: 55  RLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAV 114

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           ++++       AR + GH+V  +S+ G++  P  G Y
Sbjct: 115 AMTKAVLPGMRARRR-GHIVNITSMGGLITMPGIGYY 150

Length = 277

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 61.2 bits (149), Expect = 4e-11
 Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           N    KV  +TG + G+G A A  L   GAK+VLS       E  +    + G    + +
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDI---LDEEGQAAAAELGD--AARF 55

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
              LDVT         D   + FG LD+L+NNAG       E   LE  R L 
Sbjct: 56  -FHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLL 107

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 60.9 bits (148), Expect = 5e-11
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 3/92 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+ KV  +TG ++GIG A AL  ++ GAK+V++ R ++  E    L  +AG   ++++  
Sbjct: 5   FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGG--EALFVA 62

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DVT+    +   +  I  +G LD   NNAG
Sbjct: 63  C-DVTRDAEVKALVEQTIAAYGRLDYAFNNAG 93

Length = 253

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 60.9 bits (148), Expect = 5e-11
 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYTLT 104
           NKV  +TGAS GIG A+A +L+  G  + ++   S+   + +      AG    ++    
Sbjct: 5   NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA-- 62

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV-DREL 153
            DV       R FDA    FG +D+L+NNAG        D +LE  DR +
Sbjct: 63  -DVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTI 111

Length = 245

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 60.9 bits (148), Expect = 5e-11
 Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KV  +TGA SG GE +A + ++ GA++V++  ++   ERV      A    ++   +  
Sbjct: 5   GKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERV------AADIGEAAIAIQA 58

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR---PSI 162
           DVT+        +A + +FG LDIL+NNAG + R       LEVD E F   +     SI
Sbjct: 59  DVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNK---PMLEVDEEEFDRVFAVNVKSI 115

Query: 163 YTLTLDV 169
           Y     +
Sbjct: 116 YLSAQAL 122

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 60.9 bits (148), Expect = 6e-11
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 4/102 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TG +SGIG A+A +L+  GA +V++       E+V      A   P+++  +  D
Sbjct: 2   KVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAE---AAQGGPRAL-GVQCD 57

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           VT     +  F+  + +FG LDI+++NAG +  +   +  LE
Sbjct: 58  VTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLE 99

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 60.5 bits (147), Expect = 7e-11
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 2/94 (2%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           D+T+ +   R     + +FG LDIL+NNAG   +   ED ++E   ++  LN+ +V+ L+
Sbjct: 63  DLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYLT 122

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           ++A  + +  +  G +V  SS+AG    P    Y
Sbjct: 123 KLAVPHLIKTK--GEIVNVSSVAGGRSFPGVLYY 154

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 60.8 bits (148), Expect = 7e-11
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARS--SSNLERVKNLCVQAGAHPQSIYTL 103
            K   ITG  SGIG A+A+  ++ GA + ++       + E  K L  + G   +    +
Sbjct: 26  GKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEG---RKCLLI 82

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+    + R     V+++FG LDIL+NNA        E IE ++  E     +R +I+
Sbjct: 83  PGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQ--ESIE-DITTEQLEKTFRTNIF 139

Query: 164 TL 165
           ++
Sbjct: 140 SM 141

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 60.1 bits (146), Expect = 8e-11
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 3/108 (2%)

Query: 155 TYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRE 214
             A    +  +  D    +  R   DA+  +FG +D+L++NAG  +     +        
Sbjct: 40  LSASGGDVEAVPYDARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEA 99

Query: 215 LFELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
            F +NV +   L+R        RE G G +V  +S++G      +  Y
Sbjct: 100 HFSINVIAPAELTRALLPAL--REAGSGRVVFLNSLSGKRVLAGNAGY 145

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 60.2 bits (146), Expect = 8e-11
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 30/108 (27%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ---SI 100
              K ++ITGAS GIG+A+AL+ ++ GA +V++A++             A  HP+   +I
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKT-------------AEPHPKLPGTI 47

Query: 101 YT--------------LTLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
           YT                +D+      R   +  +++FG +DIL+NNA
Sbjct: 48  YTAAEEIEAAGGKALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNA 95

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 8e-11
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            K+  +TGAS GIGEA+A  L++ GA +++S+R     + V +  V AG   +++     
Sbjct: 8   GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIG 67

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           ++ Q       F  + ++ G LDIL+NNA 
Sbjct: 68  EMEQID---ALFAHIRERHGRLDILVNNAA 94

Length = 252

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
             T DV+  +  +   +A+ + FG +DIL+NNAG  +R   E+      R++ ++N+  V
Sbjct: 58  AFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGV 117

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             +S+    + + +   G ++   S+   +G P   +Y 
Sbjct: 118 FFVSQAVARHMIKQ-GHGKIINICSLLSELGGPPVPAYA 155

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 59.6 bits (144), Expect = 1e-10
 Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 1/123 (0%)

Query: 139 RAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR 198
           R A  DI LE  R        P+   ++LDVT      RC  A++ ++G +DIL+NNA  
Sbjct: 29  RVAIADINLEAARAT-AAEIGPAACAISLDVTDQASIDRCVAALVDRWGSIDILVNNAAL 87

Query: 199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS 258
              A   DI  E    LF +NV   L + +      +A+ +GG ++  +S AG  G    
Sbjct: 88  FDLAPIVDITRESYDRLFAINVSGTLFMMQAVARAMIAQGRGGKIINMASQAGRRGEALV 147

Query: 259 GSY 261
           G Y
Sbjct: 148 GVY 150

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KVV ITG + GIG A A  L+  GA++ +     +  +            P      
Sbjct: 3   LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGP------ 56

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            LDVT         DAV    G +D+L+NNAG
Sbjct: 57  -LDVTDPASFAAFLDAVEADLGPIDVLVNNAG 87

Length = 273

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 43  YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
            F+ K+V +TGA SGIG   AL  ++ GA++V S    +  ER   L   AGA     + 
Sbjct: 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVA---HA 368

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             +DV+         + V  + G  DI++NNAG
Sbjct: 369 YRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAG 401

Length = 582

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ-SIYTLTL 105
           + + ITGASSG+G  +A + +  G  L L AR +  LE +K   +    +P   +    L
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLA--RYPGIKVAVAAL 60

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DV         F     + G LD +I NAG
Sbjct: 61  DVNDHDQVFEVFAEFRDELGGLDRVIVNAG 90

Length = 248

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 1/102 (0%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
           PS+    LDVT  + ++     +  + G LD++I NAG  +  +  D+  +  RE  + N
Sbjct: 47  PSVEVEILDVTDEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTN 106

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +    ++   A   F A+ + GHLV+ SS+A + G P + +Y
Sbjct: 107 LLGAAAILEAALPQFRAKGR-GHLVLISSVAALRGLPGAAAY 147

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYTL 103
            +KV  ITGA+ GIG A+A +L+  G  +VL   +  NLE   K+   +      +   +
Sbjct: 1   MSKVAIITGAAQGIGRAIAERLAADGFNIVL---ADLNLEEAAKSTIQEISEAGYNAVAV 57

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DVT         D  +++FG  D+++NNAG
Sbjct: 58  GADVTDKDDVEALIDQAVEKFGSFDVMVNNAG 89

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 47  KVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           KV  +TGA+ GIG  +  QL+K G   ++L+AR   ++ER +    +  A   S+    L
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTAR---DVERGQAAVEKLRAEGLSVRFHQL 57

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DVT         D V +++G LDIL+NNAG
Sbjct: 58  DVTDDASIEAAADFVEEKYGGLDILVNNAG 87

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 59.5 bits (144), Expect = 2e-10
 Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 41  LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
           ++  N K   +TGA+SGIG+ +AL+L++ GA + ++  +      V +   +AG   ++I
Sbjct: 2   MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGG--KAI 59

Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             + +DVT         D V ++FG +DIL++NAG
Sbjct: 60  G-VAMDVTNEDAVNAGIDKVAERFGSVDILVSNAG 93

Length = 262

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 2/110 (1%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            +V  +T + SGIG+A AL L++ G  + ++  S    E  K    +  +H        L
Sbjct: 2   AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDE--EGAKETAEEVRSHGVRAEIRQL 59

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFT 155
           D++      +  D +IQ+ G +D+L+NNAG   +A + D++ +  R++FT
Sbjct: 60  DLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFT 109

Length = 256

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 30/108 (27%), Positives = 40/108 (37%), Gaps = 13/108 (12%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL--ERVKNLCVQAGAHPQSIYTLT 104
           KV  ITG +  IG A+A  L   G ++ +    S+         L       P S   L 
Sbjct: 7   KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL---RPGSAAALQ 63

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNA--------GRSQRAAWED 144
            D+           A +  FG LD L+NNA        G    A W+D
Sbjct: 64  ADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDD 111

Length = 249

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 60.3 bits (146), Expect = 2e-10
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 3/106 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYT 102
              +V ++TG + GIG   A +L+  GA +VL+  +    E V   +  Q GA       
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA--GRAVA 469

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           L +DVT  +  +  F  V   +G +DI++NNAG +  + +E+  L+
Sbjct: 470 LKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQ 515

Length = 676

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 2e-10
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG--AHPQSIYTLT 104
           +V  +TGA  G+G A+AL  ++ GA ++++AR+ S L+ V      AG  AH      + 
Sbjct: 11  QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHV-----VA 65

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTY 156
            D+   +         ++ FG LDI++NN G +          +   + FT+
Sbjct: 66  ADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTF 117

Length = 263

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            +V  +TG++ G+G  +A  L+  GA ++++ R+++ LE        AG   ++   L  
Sbjct: 11  GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEA---LAF 67

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDREL 153
           D+   +     F  +  + G LDIL+NN G   R    +++    R L
Sbjct: 68  DIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRAL 115

Length = 256

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 57.6 bits (140), Expect = 3e-10
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAK-LVLSARS--SSNLERVKNLCVQAGAHPQSIYTL 103
             V ITG + G+G ALA  L+  GA+ LVL +R   +     +       GA    +   
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAE---VTVA 57

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             DV           A+    G LD +++NAG       E++  E
Sbjct: 58  ACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPE 102

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 9/113 (7%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           +KVV +TG +SGIG A++L+L++ GA  V+  RS+ + E  + L       P++ + + +
Sbjct: 7   DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEEL---RALQPRAEF-VQV 62

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY 158
           D+T     R   +  + +FG +D L+NNAG +         LE  RE F  + 
Sbjct: 63  DLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVG-----LEAGREAFVASL 110

Length = 258

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 58.6 bits (142), Expect = 3e-10
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
                + ITG +SGIG ALA +  + G  +++  R+   L   K            I+T 
Sbjct: 3   TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-------PEIHTE 55

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV      R   + + +++  L++LINNAG
Sbjct: 56  VCDVADRDSRRELVEWLKKEYPNLNVLINNAG 87

Length = 245

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYTLTLDVTQ 109
           +TG S GIG+A+AL+L++ GA +V++ R S +    V     + G        +  DV+Q
Sbjct: 3   VTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGG---KAVVVRADVSQ 59

Query: 110 TKYHRRCFDAVIQQFGCLDILINNA 134
            +     F AV ++FG LD+L++NA
Sbjct: 60  PQDVEEMFAAVKERFGRLDVLVSNA 84

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 58.7 bits (142), Expect = 3e-10
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F +KVV ITG  SG+G A A++L+K GAKL L   +   LE  K   +   A    +  +
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKA-ALLEIAPDAEVLLI 59

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV+         DA ++QFG +D   NNAG
Sbjct: 60  KADVSDEAQVEAYVDATVEQFGRIDGFFNNAG 91

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
           ++ L+LDVT     +   D +I + G +D+L+NNAG     A ED+ ++  R  FE+N+F
Sbjct: 48  VHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLF 107

Query: 222 SVLSLSRIATSYFLAREQG-GHLVVTSSIAG----IVGAPYSGS 260
               L+++   +   R Q  G ++  SS+ G     +GA Y  +
Sbjct: 108 GAARLTQLVLPHM--RAQRSGRIINISSMGGKIYTPLGAWYHAT 149

Length = 273

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 1/123 (0%)

Query: 139 RAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR 198
           R    DI+    R        P+   ++LDVT+     R   A +++FG +DIL NNA  
Sbjct: 32  RVVIADIKPARARLAAL-EIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAAL 90

Query: 199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS 258
              A   DI  +    LF +NV  +  L +    + + + +GG ++  +S AG  G    
Sbjct: 91  FDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALV 150

Query: 259 GSY 261
             Y
Sbjct: 151 SHY 153

Length = 257

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 5/100 (5%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
             LDVT         DAV    G +D+L+NNAG      + D    V R + ++NV+ V+
Sbjct: 55  GPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVI 114

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
             S++A    + R + GH+V  +S+AG +  P    Y  S
Sbjct: 115 LGSKLAAPRMVPRGR-GHVVNVASLAGKIPVPGMATYCAS 153

Length = 273

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 7/102 (6%)

Query: 39  KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
           KRL    NKV  ITGAS+GIG+A A+ L++ GA  VL+   +  +    +     G   +
Sbjct: 2   KRLE---NKVAVITGASTGIGQASAIALAQEGAY-VLAVDIAEAVSETVDKIKSNGGKAK 57

Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 140
           + +   +D++  +  +     + +QFG +D+L NNAG    A
Sbjct: 58  AYH---VDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAA 96

Length = 272

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 58.0 bits (141), Expect = 5e-10
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 12/92 (13%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+ K VW+TGA+ GIG A+AL   + GAK++   ++    E                 T 
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE------------DYPFATF 53

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            LDV+      +    ++ + G LD+L+N AG
Sbjct: 54  VLDVSDAAAVAQVCQRLLAETGPLDVLVNAAG 85

Length = 252

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
           F+ KV  +TG+S GIG+A+AL+L++ G  + ++ ARS    E         G        
Sbjct: 2   FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGR---KALA 58

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
           +  +V   +  +  F  + ++FG LD+ +NNA
Sbjct: 59  VKANVGDVEKIKEMFAQIDEEFGRLDVFVNNA 90

Length = 250

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 57.9 bits (140), Expect = 6e-10
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 2/98 (2%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
            + LDV       R  + +  + G LD+LINNAG        D  +E  R  FE NVF+V
Sbjct: 48  AVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAV 107

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           + ++R    + L R   G +V   S++G++  P++G+Y
Sbjct: 108 VGVTR--ALFPLLRRSRGLVVNIGSVSGVLVTPFAGAY 143

Length = 274

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 58.3 bits (141), Expect = 6e-10
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 8/117 (6%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLS--ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           ITGA SGIG A A+  ++ GA + L+       +   V  L    G   +    L  D+ 
Sbjct: 60  ITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEG---RKAVALPGDLK 116

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
              + R+  +  +++ G LDIL+N AG+    A +DI  ++  E F   ++ ++Y +
Sbjct: 117 DEAFCRQLVERAVKELGGLDILVNIAGKQT--AVKDIA-DITTEQFDATFKTNVYAM 170

Length = 300

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 6e-10
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           V ITGA+SG+G A+AL+ ++ G +L L+  +    E    L  +AG      +    DV 
Sbjct: 3   VMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDG---FYQRCDVR 59

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
                     A  +++G +D+++NNAG +    +E++ LE
Sbjct: 60  DYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLE 99

Length = 270

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 57.7 bits (140), Expect = 7e-10
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELE 210
            +   +  L LDV+  +      + + ++F  +DIL+NNAG       +Q A  ED E  
Sbjct: 47  KFPVKVLPLQLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWE-- 104

Query: 211 VDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGS 260
               + + NV  +L+++R+     +AR Q GH++   SIAG    PY+G 
Sbjct: 105 ---TMIDTNVKGLLNVTRLILPIMIARNQ-GHIINLGSIAGR--YPYAGG 148

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 57.7 bits (140), Expect = 7e-10
 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 7/108 (6%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS-IYTL 103
            +K++ ITGA+  IG+A    L   GA+L+L+     N   ++ L  +     ++ +  L
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADI---NAPALEQLKEELTNLYKNRVIAL 57

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG---RSQRAAWEDIELE 148
            LD+T  +  +   ++ +++FG +DILINNA    +   + +E+   E
Sbjct: 58  ELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYE 105

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 57.5 bits (139), Expect = 7e-10
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 183 IQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGG 241
           ++QFG LD+++ NAG  S   +WE +  E    + ++N+  V    +    + + R  GG
Sbjct: 88  VEQFGRLDVVVANAGVLSYGRSWE-LSEEQWDTVLDINLTGVWRTCKAVVPHMIERGNGG 146

Query: 242 HLVVTSSIAGIVGAPYSGSYT 262
            +++TSS+AG+   P    Y 
Sbjct: 147 SIIITSSVAGLKALPGLAHYA 167

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 57.4 bits (139), Expect = 8e-10
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSVLSL 226
           DV       R FD  +++FG LD+L+NNAG        ++I  E   +   +N+      
Sbjct: 66  DVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYF 125

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAP 256
           +R A     A   GG ++  SS+AG +G P
Sbjct: 126 ARAAVPLLKASGHGGVIIALSSVAGRLGYP 155

Length = 264

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 56.8 bits (137), Expect = 1e-09
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 14/107 (13%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS------QRAAWEDIELEVDREL 215
            +  T D+      +    A +++FG +D+LINN G +      +    E IE E+ R L
Sbjct: 54  AHVHTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSL 113

Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA--GIVGAPYSGS 260
                F  L   R    + L R+Q G +V  SSIA  GI   PYS +
Sbjct: 114 -----FPTLWCCRAVLPHMLERQQ-GVIVNVSSIATRGIYRIPYSAA 154

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
           LDVT         D   + FG LD+L+NNAG       E   LE  R L ++N+  V   
Sbjct: 58  LDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVF-- 115

Query: 227 SRIATSYFLA--REQG-GHLVVTSSIAGIVGAPYSGSYT 262
             + T   +   +E G G ++  SSI G+VG P   +Y 
Sbjct: 116 --LGTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYN 152

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA-AWEDIELEVDRELFELNVFSVLSL 226
           D+    + R     V+++FG LDIL+NNA       + EDI  E   + F  N+FS+  L
Sbjct: 85  DLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFYL 144

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           ++ A  +    ++G  ++ T+S+    G+P+   Y 
Sbjct: 145 TKAALPHL---KKGSSIINTTSVTAYKGSPHLLDYA 177

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 5/102 (4%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
            +     DV           A+    G LD +++NAG       E++  E    +    V
Sbjct: 53  EVTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKV 112

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
               +L  +           G  V+ SS+AG++G+P   +Y 
Sbjct: 113 TGAWNLHEL-----TRDLDLGAFVLFSSVAGVLGSPGQANYA 149

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 9/89 (10%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
            VV ITG SSGIG ALA      G ++  +AR + ++E +      AG        + LD
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AAG-----FTAVQLD 52

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           V       R  + +  + G LD+LINNAG
Sbjct: 53  VNDGAALARLAEELEAEHGGLDVLINNAG 81

Length = 274

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 57.2 bits (138), Expect = 1e-09
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           ++V  +TGA+SGIG A+A +L K G ++ + AR    L        +AG         T 
Sbjct: 3   SEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADG---RTC 59

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 149
           DV           A + ++G +D+L+NNAGRS   A  ++  E+
Sbjct: 60  DVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADEL 103

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 57.4 bits (139), Expect = 1e-09
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 5/100 (5%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K  ++TGA+SGIG A AL+L+  GA+L L+ R +  L +        G          LD
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGG--TVPEHRALD 58

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE 146
           ++           +    G +D+++N AG S   AW  ++
Sbjct: 59  ISDYDAVAAFAADIHAAHGSMDVVMNIAGIS---AWGTVD 95

Length = 272

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 10/107 (9%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           ++  +TG   GIG A+  +L+K G ++   A    N ER +    + GA       +  D
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVA--ANCGPNEERAEAWLQEQGALGFDFRVVEGD 58

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
           V+  +  +     V  + G +D+L+NNAG        +     W  +
Sbjct: 59  VSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAV 105

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 4/91 (4%)

Query: 47  KVVWITGAS-SGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYTLT 104
           KVV +T A+ +GIG A A +  + GA++V+S      L E    L  + G     +  + 
Sbjct: 18  KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELG--LGRVEAVV 75

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            DVT         DA +++ G LD+L+NNAG
Sbjct: 76  CDVTSEAQVDALIDAAVERLGRLDVLVNNAG 106

Length = 262

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 13/116 (11%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           + +V  ITG  SGIG AL  +    GA++ +  RS+  L  ++            +  + 
Sbjct: 5   HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQ------RFGDHVLVVE 58

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVDRELF 154
            DVT    ++R  D  +  FG LD  + NAG             E ++   D E+F
Sbjct: 59  GDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFD-EIF 113

Length = 263

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             K+  +TGA  GIG A+A +L   G +++ +  S    +  K+   + G     +    
Sbjct: 1   MKKIALVTGAKRGIGSAIARELLNDGYRVIATYFS--GNDCAKDWFEEYGFTEDQVRLKE 58

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ 138
           LDVT T+        + ++ G +DIL+NNAG ++
Sbjct: 59  LDVTDTEECAEALAEIEEEEGPVDILVNNAGITR 92

Length = 245

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 7/106 (6%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVL----SARSSSNLERVKNLCVQAGAHPQSIYT 102
           + V ITG S G+G A+A++L+  GA +++      R  +  + V      AG        
Sbjct: 7   RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGK---ALG 63

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           L  DV      R   DA +++FG LDIL+NNAG +  AA+ ++ +E
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIE 109

Length = 249

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 30/109 (27%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ---SI 100
            + K ++ITGAS GIG A+AL+ ++ GA +V++A++             A  HP+   +I
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKT-------------AEPHPKLPGTI 50

Query: 101 YT--------------LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +T              L  DV             +++FG +DI +NNA 
Sbjct: 51  HTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNAS 99

Length = 273

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 12/109 (11%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  K   +TGA  GIG A    L+K GA++V  +R+ ++L+ +   C         I  +
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVREC-------PGIEPV 57

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE-VDR 151
            +D++          +V    G +D+L+NNA  +    + ++  E  DR
Sbjct: 58  CVDLSDWDATEEALGSV----GPVDLLVNNAAVAILQPFLEVTKEAFDR 102

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 55.9 bits (136), Expect = 2e-09
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 5/104 (4%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
               L  DV+     R   +A ++ FG LDIL+NNAG ++ A    +  E    + ++N+
Sbjct: 55  EARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNL 114

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG----APYSGS 260
               ++ R A    +     G +V  SS++G+ G      YS +
Sbjct: 115 TGTFNVVRAALPPMIKARY-GRIVNISSVSGVTGNPGQTNYSAA 157

Length = 246

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 2/95 (2%)

Query: 168 DVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
           DV+     +   D V   F G L+IL+NNAG + R   +D   E    +   N  +   L
Sbjct: 63  DVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHL 122

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           SR+A    L     G++V  SS+AG++  P    Y
Sbjct: 123 SRLAHP-LLKASGNGNIVFISSVAGVIAVPSGAPY 156

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 3/107 (2%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            K+  ITGAS GIG A+A   +K GA +V +  +   +++      + G      +    
Sbjct: 10  GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGI---EAHGYVC 66

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRE 152
           DVT     +     + ++ G +DIL+NNAG  +R    ++  E  R+
Sbjct: 67  DVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQ 113

Length = 265

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 17/102 (16%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI-ELEVDRELFELNVFSVLSL 226
           DV+      R FDA  + FG +DIL+NNAG   +    +  E E DR +F +N       
Sbjct: 61  DVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDR-MFTVNT------ 113

Query: 227 SRIATSYFLARE------QGGHLVVTSSIAGIVGAPYSGSYT 262
                ++F+ +E       GG ++  SS       P  G+Y 
Sbjct: 114 ---KGAFFVLQEAAKRLRDGGRIINISSSLTAAYTPNYGAYA 152

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV       R  +  +++FG +DIL+NNAG +  A  ED  +E   ++  LNV  +  LS
Sbjct: 69  DVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLS 128

Query: 228 R-IATSYFLAREQGGHLVVTSSIAGIVGAP 256
           + +A    + R   G ++  +S+AG+ G P
Sbjct: 129 QAVAKRSMIPR-GYGRIINVASVAGLGGNP 157

Length = 259

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
              V  +TG +SG+G A   +L   GAK+V+    +S  E V      A       +   
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETV------AKLGDNCRFV-P 53

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +DVT  K  +        +FG LDI++N AG
Sbjct: 54  VDVTSEKDVKAALALAKAKFGRLDIVVNCAG 84

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 56.0 bits (135), Expect = 3e-09
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TG ++GIGE++     K GAK+ +      +L   +N+C   G  P   +    D
Sbjct: 19  KVALVTGGATGIGESIVRLFHKHGAKVCI-VDLQDDLG--QNVCDSLGGEPNVCF-FHCD 74

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           VT      R  D  + +FG LDI++NNAG
Sbjct: 75  VTVEDDVSRAVDFTVDKFGTLDIMVNNAG 103

Length = 280

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 55.6 bits (134), Expect = 3e-09
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 8/95 (8%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS---NLERVKNLCVQAGAHPQSI 100
           + +KVV +TG S GIG  +     + GAK+V  AR  +    LE   N      A P S 
Sbjct: 7   YADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELN-----RAGPGSC 61

Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             +  DVT+ +  +      +++FG +D L+NNAG
Sbjct: 62  KFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAG 96

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 55.6 bits (134), Expect = 3e-09
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 1/95 (1%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
           +D+   +  RR  D V +QFG LD L+N AG        D + +    ++ +NV + L+ 
Sbjct: 61  IDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNA 120

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           S+ A    L    GG +V   + A +   P  G+Y
Sbjct: 121 SKAALPA-LTASGGGRIVNIGAGAALKAGPGMGAY 154

Length = 239

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 8/112 (7%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
            + KV  +TG + G+G A+A   ++ GA  LV+  R++   E         GA  ++++ 
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGA--KAVFV 61

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
              D++  +  RR   A  + FG LD L+N AG + R       L+   ELF
Sbjct: 62  QA-DLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTI----LDTSPELF 108

Length = 260

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 55.6 bits (134), Expect = 4e-09
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           + K   ITGA +GIG+ +A+  +  GA +V+S  ++     V +   Q G   Q+     
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG--QAF-ACR 66

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            D+T  +      D  + + G +DIL+NNAG
Sbjct: 67  CDITSEQELSALADFALSKLGKVDILVNNAG 97

Length = 255

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 55.6 bits (134), Expect = 4e-09
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 4/103 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVL-SARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           +V ++TGA SGIG+ +A+ L++ GA + L   R+   L         AG   ++I  +  
Sbjct: 9   QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGR--RAIQ-IAA 65

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           DVT     R        + G L + +N AG +     E++E E
Sbjct: 66  DVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEE 108

Length = 254

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.2 bits (133), Expect = 5e-09
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 10/123 (8%)

Query: 43  YFNNKVVWITGASSGIGEALALQLSKCGAKL-VLSARSSSNLERVKNLCVQAGAHPQSIY 101
            F  KV  ITG + GIG A+A    + GAK+ VL   + +  + ++          + ++
Sbjct: 4   RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE---------KGVF 54

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS 161
           T+  DV      ++  + V ++FG +D+L+NNAG      +E+ + E   ++       +
Sbjct: 55  TIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGA 114

Query: 162 IYT 164
           IYT
Sbjct: 115 IYT 117

Length = 255

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 55.2 bits (133), Expect = 6e-09
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 8/114 (7%)

Query: 149 VDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDI 207
           ++ EL   A   S   +  DVT+ +  +      +++FG +D L+NNAG        ++ 
Sbjct: 49  LESELNR-AGPGSCKFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDET 107

Query: 208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG----APY 257
             +  R+L  LN+ S    S+ A  +   R+  G+++  SS+ G +G    APY
Sbjct: 108 SAQEFRDLLNLNLISYFLASKYALPHL--RKSQGNIINLSSLVGSIGQKQAAPY 159

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 7e-09
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 14/110 (12%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQF-----GCLDILINNAGRSQRAAWEDIELEVDRE 214
            + +T  LDVT     R  +DA +  F     G LD+L NNAG  +   +EDI LE    
Sbjct: 48  GNAWTGALDVTD----RAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDR 103

Query: 215 LFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
           + ++NV  VL+ +  A  Y L    G  ++ TSS + I G P    YS +
Sbjct: 104 VIDINVKGVLNGAHAALPY-LKATPGARVINTSSASAIYGQPGLAVYSAT 152

Length = 260

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 54.7 bits (132), Expect = 7e-09
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
            +KV  +TGA  GIG A+A +L + G K+   A    N E  +    +          + 
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKV---AIVDYNEETAQAAADKLSKDGGKAIAVK 57

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
            DV+           V+  FG L++++NNAG +     E I  E   +++
Sbjct: 58  ADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVY 107

Length = 256

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 54.3 bits (131), Expect = 8e-09
 Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 144 DIELEVDRELFTYAY-RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 202
           DI+ E+  ++   A   P    +  DVT     +  F+  + +FG LDI+++NAG +  +
Sbjct: 32  DIDPEIAEKVAEAAQGGPRALGVQCDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSS 91

Query: 203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSS----IAGIVGAPYS 258
              +  LE      ++N+     +SR A     ++  GG++V  +S      G   A YS
Sbjct: 92  PIAETSLEDWNRSMDINLTGHFLVSREAFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYS 151

Query: 259 GS 260
            +
Sbjct: 152 AA 153

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 54.5 bits (131), Expect = 8e-09
 Identities = 24/91 (26%), Positives = 47/91 (51%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           N++++ +TGAS GIG   AL  ++ GA ++L  R+   L +V +   + G      + L 
Sbjct: 3   NDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILD 62

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           L    ++  ++    +   +  LD +++NAG
Sbjct: 63  LLTCTSENCQQLAQRIAVNYPRLDGVLHNAG 93

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 54.3 bits (131), Expect = 9e-09
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 15/101 (14%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVL---------SARSSSNLERVKNLCVQAG 94
           F+ +VV +TGA  G+G A AL  ++ GAK+V+         S +SSS  ++V +    AG
Sbjct: 3   FDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAG 62

Query: 95  AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               + Y     V   +   +     I  FG +DIL+NNAG
Sbjct: 63  GKAVANYD---SVEDGE---KIVKTAIDAFGRVDILVNNAG 97

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 13/108 (12%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELEVD--RELF 216
           +   L LDVT         +A+ ++FG +DIL+NNAG            E ++D    + 
Sbjct: 54  AALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLD----EADLDDWDRMI 109

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPYSGS 260
           + NV  +L+ +R      + R + GH++   SIAG      GA Y  +
Sbjct: 110 DTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIAGRYPYPGGAVYGAT 156

Length = 246

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 12/120 (10%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KV  ITG  SGIG A+A+  +K GA + +               V+          +  
Sbjct: 46  GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK--EGVKCLLIPG 103

Query: 106 DVTQTKYHRRCFDAV---IQQFGCLDILINNAGRSQ-RAAWEDIELE-VDRELFT--YAY 158
           DV+   +   C DAV   +++ G LDIL+NNA     + + EDI  E +D+   T  Y+Y
Sbjct: 104 DVSDEAF---CKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSY 160

Length = 290

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 7/107 (6%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  +TGA +GIG A A +L++ GA++V++     +    + +  Q      ++   
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADI---DGGAAQAVVAQIAGGALAL--- 54

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEV 149
            +DVT  +     F+  +++FG LD+L+NNAG      A  D +L V
Sbjct: 55  RVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAV 101

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 3/88 (3%)

Query: 48  VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV 107
           V  +TG ++GIG+A+A  L+K GA +V++   S   E V     QAG        L  +V
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQA---IGLECNV 57

Query: 108 TQTKYHRRCFDAVIQQFGCLDILINNAG 135
           T  +       A + QFG + IL+NNAG
Sbjct: 58  TSEQDLEAVVKATVSQFGGITILVNNAG 85

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 28/95 (29%), Positives = 47/95 (49%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
           LDV+         D   ++FG  D+++NNAG +      +I  E  ++++ +NV  VL  
Sbjct: 56  LDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFG 115

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            + A   F  +  GG ++  +SIAG  G P   +Y
Sbjct: 116 IQAAARQFKKQGHGGKIINAASIAGHEGNPILSAY 150

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             KVV ITG   G+G A A  L+  GA++ L  R ++ L +        G    ++    
Sbjct: 6   QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQT-----LPGVPADALRIGG 60

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +D+   +  RR  D V +QFG LD L+N AG
Sbjct: 61  IDLVDPQAARRAVDEVNRQFGRLDALVNIAG 91

Length = 239

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 4/100 (4%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           +  DV+           V+  FG L++++NNAG +     E I  E   +++ +NV  V+
Sbjct: 56  VKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVI 115

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
              + A   F     GG ++  +S AG+VG P    YS +
Sbjct: 116 WGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSST 155

Length = 256

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSV 223
           L +DVT  +     F+  +++FG LD+L+NNAG      A  D +L V  +   +N+   
Sbjct: 54  LRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGT 113

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
               R A    +AR  GG +V  SSIAG  G P  G+Y
Sbjct: 114 FLCCRHAAPRMIAR-GGGSIVNLSSIAGQSGDPGYGAY 150

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 4/90 (4%)

Query: 51  ITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ 109
           +TGAS GIG A+A +L+  G    +           V    + AG           D+ +
Sbjct: 6   VTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYF---QADIGE 62

Query: 110 TKYHRRCFDAVIQQFGCLDILINNAGRSQR 139
              H    D   + FG LD L+NNAG + R
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVR 92

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  ITG +SGIGEA A   +K GA++V+     ++++      V A      I  +  D
Sbjct: 5   KVAIITGGASGIGEATARLFAKHGARVVI-----ADIDDDAGQAVAAELGDPDISFVHCD 59

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRS 137
           VT     R   D  + +FG LDI+ NNAG  
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNAGVL 90

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 6/106 (5%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDREL 215
              P +  L LDVT          A  +    + IL+NNAG  +  +   + + +  R  
Sbjct: 46  DLGPRVVPLQLDVT----DPASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAE 101

Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            E N F  L+++R A +  LA   GG +V   S+   V  P  G+Y
Sbjct: 102 METNYFGPLAMAR-AFAPVLAANGGGAIVNVLSVLSWVNFPNLGTY 146

Length = 238

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           V +TGA+ GIG A+A  L++ GA++    R+   L  +     + G       T  LDV 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFA---TYKLDVA 57

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAG 135
            +         + +++G +D+L+N AG
Sbjct: 58  DSAAVDEVVQRLEREYGPIDVLVNVAG 84

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 4/90 (4%)

Query: 47  KVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            V  +TG   GIG  +A  L+  G    +        L   +      G   + I+    
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGV--EVIF-FPA 59

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DV     H    DA    +G +D L+NNAG
Sbjct: 60  DVADLSAHEAMLDAAQAAWGRIDCLVNNAG 89

Length = 256

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 30/100 (30%), Positives = 57/100 (57%)

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
            +LT D++  +  +   D+ +++FG +DIL+NNAG  +RA  E+   +   ++  +N+ S
Sbjct: 55  LSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKS 114

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           V  L++ A  +FL + +GG ++  +S+    G     SYT
Sbjct: 115 VFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYT 154

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 4/100 (4%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           L  DV      R   DA +++FG LDIL+NNAG +  AA+ ++ +E   ++ ++N+    
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFF 123

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVG----APYSGS 260
           ++++ A    +   +GG +V  +S+AG+ G      Y+ S
Sbjct: 124 NVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAAS 163

Length = 249

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 15/99 (15%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
              KVV +TGA+ GIG A   QL   GA K+  +AR   + E V +L       P     
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAAR---DPESVTDL--GPRVVP----- 53

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 141
           L LDVT          A  +    + IL+NNAG  +  +
Sbjct: 54  LQLDVT----DPASVAAAAEAASDVTILVNNAGIFRTGS 88

Length = 238

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 53.1 bits (127), Expect = 3e-08
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 3/98 (3%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT 110
           ITGAS+GIG+ +AL   + GA++ ++AR    LE++ +    +G     +  +  DV+Q 
Sbjct: 14  ITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGG---KVVPVCCDVSQH 70

Query: 111 KYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           +      D V  + G +DI + NAG        D+ LE
Sbjct: 71  QQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLE 108

Length = 253

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 3/104 (2%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYTLT 104
           N+V  + G    +G  L   L++ G ++ ++  +S     V + +  + G      Y   
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEG--MAYGFG 59

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            D T  +        V + FG +D+L+ NAG ++ A   D +L 
Sbjct: 60  ADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLG 103

Length = 259

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 11/108 (10%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           +VV +TGAS G+G A+A   ++ GA++V++   S+  E  + +  +AG    +I     D
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRST--ESAEAVAAEAGERAIAI---QAD 55

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRS------QRAAWEDIELE 148
           V      +   +     FG +D ++NNA         QR  ++ I+ E
Sbjct: 56  VRDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWE 103

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  KV  ITGA+SG G A A   +  G KLVL+      L+R        GA    +  +
Sbjct: 4   FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGA---EVLGV 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV+         DA +++FG + +L NNAG
Sbjct: 61  RTDVSDAAQVEALADAALERFGAVHLLFNNAG 92

Length = 287

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 33/106 (31%), Positives = 45/106 (42%), Gaps = 5/106 (4%)

Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
              +  L  DV      RR  DA+ + FG LD L+NNAG       E++  E  R + + 
Sbjct: 45  LEGVLGLAGDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDT 104

Query: 219 NVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPYSGS 260
           N+         A    L R  GG +V   S+AG      GA Y+ S
Sbjct: 105 NLTGAFYCIHKAAPALLRR-GGGTIVNVGSLAGKNAFKGGAAYNAS 149

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 14/102 (13%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
            +     DV           AV  +FG +D+L+NNAG+ + + + D   +  R+  EL  
Sbjct: 60  RLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKY 119

Query: 221 FSVLSLSR--------------IATSYFLAREQGGHLVVTSS 248
           FSV++ +R              +  +  LA +   H+V TS+
Sbjct: 120 FSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSA 161

Length = 265

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 51  ITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           +TGAS GIG ALA +L K G  + +VL ARS   L+ +K            + T+  D++
Sbjct: 4   LTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKE----ELRPGLRVTTVKADLS 59

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAG 135
                 +  +A+ +  G  D+LINNAG
Sbjct: 60  DAAGVEQLLEAIRKLDGERDLLINNAG 86

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F++KV  +TGA+ GIG+A A  L++ GA +V++  ++   ERV    V  G    +I  +
Sbjct: 4   FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGG--TAIA-V 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
            +DV+     +   DA +  FG +D L+NNA
Sbjct: 61  QVDVSDPDSAKAMADATVSAFGGIDYLVNNA 91

Length = 250

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 52.1 bits (125), Expect = 5e-08
 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 7/105 (6%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
           S + L  DVT     R   DA   + G +DIL+NNAG   R   ED   +    L   N+
Sbjct: 60  SAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNI 119

Query: 221 FSVLSLSRIATSYFLAREQGGHL---VVTSSIA--GIVGAPYSGS 260
            SV  + +    + +AR  G  +    V S++A  GI  APY+ +
Sbjct: 120 SSVFYVGQAVARHMIARGAGKIINIASVQSALARPGI--APYTAT 162

Length = 255

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 12/94 (12%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAK---LVLSARSSSNLERVKNLCVQAGAHPQSIY 101
             +V  ITG  SG+G AL  +    GAK   L  SA      E+V  L         ++ 
Sbjct: 3   KGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSA------EKVAELRA---DFGDAVV 53

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            +  DV     + R     +++FG LD  I NAG
Sbjct: 54  GVEGDVRSLADNERAVARCVERFGKLDCFIGNAG 87

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 14/109 (12%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE-LEVDRELFELNVFSVLS 225
           LDVT         D V +++G LDIL+NNAG + +   +     E  RE  + N F    
Sbjct: 57  LDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGT-- 114

Query: 226 LSRIATSYF---LAREQGGHLVVTSSIAGIVGAPYSGS------YTDHL 265
                T      L +   G +V  SS  G + + Y  S       T  L
Sbjct: 115 --VDVTQALLPLLKKSPAGRIVNVSSGLGSLTSAYGVSKAALNALTRIL 161

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 3/95 (3%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV           A  +++G +D+++NNAG +    +E++ LE       +N+  V+   
Sbjct: 57  DVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGC 116

Query: 228 RIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
           +     F  + Q  G +V  +S+AG++  P   SY
Sbjct: 117 KAFLPLF--KRQKSGRIVNIASMAGLMQGPAMSSY 149

Length = 270

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 51.7 bits (124), Expect = 6e-08
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 14/103 (13%)

Query: 167 LDVTQTKYHRRCFDAVIQQF-----GCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
           LDVT     R  + A +  F     G LD L NNAG  +   +ED+ L     + ++NV 
Sbjct: 54  LDVTD----RAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVK 109

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
            VL+ +  A  Y L    G  ++ T+S + I G P    YS +
Sbjct: 110 GVLNGAYAALPY-LKATPGARVINTASSSAIYGQPDLAVYSAT 151

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 51.8 bits (125), Expect = 6e-08
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              K   +TG + GIG A   +L + GA++V +ARS  +        V A          
Sbjct: 7   LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAA---------- 56

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 137
             D+T  +       AV+++ G +DIL++  G S
Sbjct: 57  --DLTTAEGCAAVARAVLERLGGVDILVHVLGGS 88

Length = 260

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 11/108 (10%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            K + ITG++ GIG  LA  L++ GA+++++  ++   E       Q G      +    
Sbjct: 9   GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGI---KAHAAPF 65

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA--------WEDI 145
           +VT  +      + + +  G +D+LINNAG  +R          W D+
Sbjct: 66  NVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDV 113

Length = 254

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 51.5 bits (124), Expect = 8e-08
 Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 12/110 (10%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE-LEVDREL 215
           A R S+Y    DV             I   G  D++I NAG S     E+ E L V RE+
Sbjct: 49  AARVSVYAA--DVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREV 106

Query: 216 FELNVFSVLSLSRIAT-SYFLA---REQGGHLVVTSSIAGIVGAPYSGSY 261
            + N F ++     AT   F+A     + G LV  +S+AG+ G P +G+Y
Sbjct: 107 MDTNYFGMV-----ATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAY 151

Length = 257

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 7/83 (8%)

Query: 178 CFDAV---IQQFGCLDILINNAGRSQ-RAAWEDIELEVDRELFELNVFSVLSLSRIATSY 233
           C DAV   +++ G LDIL+NNA     + + EDI  E   + F+ N++S   +++ A  +
Sbjct: 111 CKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPH 170

Query: 234 FLAREQGGHLVVTSSIAGIVGAP 256
               +QG  ++ T SI G  G  
Sbjct: 171 L---KQGSAIINTGSITGYEGNE 190

Length = 290

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +KVV +TG+  GIG A+A++L+K G+ +V++A + +  +     +  + G   + I  L 
Sbjct: 6   DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGG--EGIGVLA 63

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            DV+  +       A I ++G  DIL+NNAG
Sbjct: 64  -DVSTREGCETLAKATIDRYGVADILVNNAG 93

Length = 252

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 51.3 bits (123), Expect = 9e-08
 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 6/106 (5%)

Query: 158 YRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA-AWEDIELEVDRELF 216
           Y   +  L LDVT  +       A   Q   +D++INNAG  + A   E+  LE  ++  
Sbjct: 48  YGDKVVPLRLDVTDPE----SIKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEM 103

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           ++NVF +L L++ A +  L    GG +V  +S+A +   P  G+Y+
Sbjct: 104 DVNVFGLLRLAQ-AFAPVLKANGGGAIVNLNSVASLKNFPAMGTYS 148

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 51.2 bits (123), Expect = 9e-08
 Identities = 50/215 (23%), Positives = 77/215 (35%), Gaps = 71/215 (33%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT 110
           ITGA+ G+G A+A ++++ GAK+ L+           ++   AG                
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKVFLT-----------DINDAAGL--------------- 37

Query: 111 KYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVT 170
                  DA   +         NA   +  A+                         DVT
Sbjct: 38  -------DAFAAEI--------NAAHGEGVAF---------------------AAVQDVT 61

Query: 171 QTKYHRRCFDAVIQQ----FGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
                   + A++ Q     G L +L+NNAG     A E IEL+  R +  +NV S+   
Sbjct: 62  DEAQ----WQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLG 117

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            + A  Y L   Q   +V  SS+A     P   +Y
Sbjct: 118 CKHALPY-LRASQPASIVNISSVAAFKAEPDYTAY 151

Length = 251

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 14/105 (13%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA------AWEDIELEVDRELFE 217
            LT D+      +    A ++ FG +D+LINN G +  A        E IE E+ R L  
Sbjct: 60  ALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSL-- 117

Query: 218 LNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA--GIVGAPYSGS 260
              F  L   R    + LA+  GG +V  SSIA  GI   PYS +
Sbjct: 118 ---FPTLWCCRAVLPHMLAQ-GGGAIVNVSSIATRGINRVPYSAA 158

Length = 260

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
            +  D+      +R FDA     G LD L+NNAG +   +  +++++    +  +NV   
Sbjct: 60  AIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGT 119

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             + R A  + L     G +V  +S   + GAP  G+Y 
Sbjct: 120 FLMLRAALPH-LRDSGRGRIVNLASDTALWGAPKLGAYV 157

Length = 250

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 4/103 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K   +TG + GIG A+  +L+  GA++   AR+   L+       + G   +       D
Sbjct: 7   KTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEG---SVCD 63

Query: 107 VTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELE 148
           V+     +   D V   F G L+IL+NNAG + R   +D   E
Sbjct: 64  VSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEE 106

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 12/91 (13%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             K++ +TG SSGIG A+  +L   GA +V +     + +           H    +  T
Sbjct: 8   QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPT 56

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            DV+  +        +I++FG +D L+NNAG
Sbjct: 57  -DVSSAEEVNHTVAEIIEKFGRIDGLVNNAG 86

Length = 266

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 51.1 bits (122), Expect = 1e-07
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
          +K + +TGAS G+GE +A   +  GA ++L AR    LE+V +  V+AG HP+
Sbjct: 6  DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPE 57

Length = 239

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYTLTL 105
           K V ITGA++GIG+  A +L++ GA+++++ R  +  E     +      H   +    L
Sbjct: 2   KTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNH--EVIVRHL 59

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           D+   K  R      + +   LD+LINNAG
Sbjct: 60  DLASLKSIRAFAAEFLAEEDRLDVLINNAG 89

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
           ++ TL LDV  +K      + V      +D+L+ NAG       E +  +    +F++NV
Sbjct: 54  TLETLQLDVCDSKSVAAAVERV--TERHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNV 111

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           F  + + + A    + R   G ++VTSS+ G+ G P++  Y 
Sbjct: 112 FGTVRMLQ-AFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYC 152

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAH-PQSIYTLTL 105
            VV ITG SSGIG  LA++L+   +K      +  +L++   L   AGA    ++ TL L
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DV  +K      + V      +D+L+ NAG
Sbjct: 61  DVCDSKSVAAAVERV--TERHVDVLVCNAG 88

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 51.4 bits (123), Expect = 1e-07
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 14/110 (12%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +KV  +TG S GIG+A+  +L + G+ ++       +   V    V            
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKV------------ 51

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDREL 153
             DV+  +   +  D VI ++G +DIL+NNAG     A   +E +    +
Sbjct: 52  --DVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRI 99

Length = 258

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR--AAWEDIELEVDRELFELNVFS 222
           L +DV+     R  F+ + ++FG +D+L+NNAG +     A  D  LE    L  +N+  
Sbjct: 56  LAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTG 115

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
              ++R A    + +  G  +V  +S AG+V  P   +Y+
Sbjct: 116 AYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYS 155

Length = 520

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 1/97 (1%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           L LDVT  +      +  ++  G LDIL+NNAG       ED +      + + N+  ++
Sbjct: 57  LELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLM 116

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             +  A  + L R + G +V  SS+AG V    S  Y
Sbjct: 117 YTTHAALPHHLLRNK-GTIVNISSVAGRVAVRNSAVY 152

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-LERVKNLCVQAGAHPQSIYTL 103
           + K+  +TGAS GIG  +ALQL + GA + ++ R+    L          G     +   
Sbjct: 2   SGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC- 60

Query: 104 TLDVTQTKYHRRCFDAV-IQQFGCLDILINNA 134
             D +        F+ V  +Q G LDIL+NNA
Sbjct: 61  --DHSDDDEVEALFERVAREQQGRLDILVNNA 90

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 12/100 (12%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVL---------SARSSSNLERVKNLCVQAGA 95
           + +VV +TGA  GIG A AL  +  GA++V+         SA   S  + V +  V AG 
Sbjct: 5   DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGG 64

Query: 96  HPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
                     D+          DA ++ FG LD+L+NNAG
Sbjct: 65  ---EAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAG 101

Length = 286

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 49.9 bits (119), Expect = 3e-07
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE-DIELEVDRELFELNVFSVLSL 226
           +VT  +       A + QFG + IL+NNAG      ++  +  E     F+LN+FS   L
Sbjct: 56  NVTSEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRL 115

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           S++   + + +  GG ++  SS++         +Y
Sbjct: 116 SQLCAPH-MQKAGGGAILNISSMSSENKNVRIAAY 149

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 4/106 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TG + GIG+ +A +L+K G  + ++  +    +       QAG    +     LD
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAY---KLD 57

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI-ELEVDR 151
           V+         D   ++FG  D+++NNAG +      +I E E+ +
Sbjct: 58  VSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKK 103

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 14/107 (13%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K ++ITGA+SGIG   AL  ++ G  + L       L     L  + GA  +++    LD
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGL---AALAAELGA--ENVVAGALD 55

Query: 107 VTQTKYHRRCFDAVIQQF-----GCLDILINNAGRSQRAAWEDIELE 148
           VT     R  + A +  F     G LD L NNAG  +   +ED+ L 
Sbjct: 56  VTD----RAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLA 98

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 14/109 (12%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQ-AGAHPQSIYTLTL 105
               ITGAS GIG A+A +L+     L+L  R +   ER+  L  +  GA P       +
Sbjct: 4   PTALITGASRGIGAAIARELAP-THTLLLGGRPA---ERLDELAAELPGATP-----FPV 54

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           D+T  +       A ++Q G LD+L++NAG +      +  ++  R   
Sbjct: 55  DLTDPE----AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATL 99

Length = 227

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.6 bits (122), Expect = 3e-07
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 24/98 (24%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCV---QAGAHPQSI--- 100
           KV  +TGA+ GIG A+A  L++ GA +V               C+    AG    ++   
Sbjct: 211 KVALVTGAARGIGAAIAEVLARDGAHVV---------------CLDVPAAGEALAAVANR 255

Query: 101 ---YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
                L LD+T      R  + + ++ G LDI+++NAG
Sbjct: 256 VGGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAG 293

Length = 450

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 4/93 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYT 102
              KV  +TG S GIG A+A  L++ GA + +   S+    E+ + L   A  +      
Sbjct: 6   LKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEEL---AKKYGVKTKA 62

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
              DV+  +   + F  + + FG +DILI NAG
Sbjct: 63  YKCDVSSQESVEKTFKQIQKDFGKIDILIANAG 95

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 49.4 bits (118), Expect = 4e-07
 Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 12/109 (11%)

Query: 48  VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV 107
           +V +TGA++G GE +  +  + G K++ + R    L+ +K+   + G    ++Y   LDV
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD---ELGD---NLYIAQLDV 55

Query: 108 TQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVD 150
                      ++  ++  +D+L+NNAG       + +A+ ED E  +D
Sbjct: 56  RNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMID 104

Length = 248

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 10/108 (9%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVL-SARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ 109
           ITGAS GIG  L  QL   G   V+ + R  S    +  L    GA    ++ L LDV  
Sbjct: 3   ITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAAL----GASHSRLHILELDV-- 56

Query: 110 TKYHRRCFDAVIQ--QFGCLDILINNAGR-SQRAAWEDIELEVDRELF 154
           T       +AV +      LD+LINNAG         +++ E   E+F
Sbjct: 57  TDEIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVF 104

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 10/111 (9%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              K   ITG +SGIG   A Q    GA++ ++ R  ++LE  +    + G     I   
Sbjct: 4   LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARA---ELGESALVIRAD 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
             DV      +    A+ + FG LD +  NAG ++ A  ED     D  +F
Sbjct: 61  AGDVAA---QKALAQALAEAFGRLDAVFINAGVAKFAPLED----WDEAMF 104

Length = 249

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 5/110 (4%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTL 103
             K   +TG+S GIG   A  L+  GA +V++ R  +    +V      AG        +
Sbjct: 5   PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRAS---AV 61

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNA-GRSQRAAWEDIELEVDRE 152
             D+T  +      D   ++FG LD L+ NA G  +    ED  + ++R+
Sbjct: 62  GADLTDEESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRD 111

Length = 248

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 49/221 (22%), Positives = 69/221 (31%), Gaps = 84/221 (38%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  K V ITGA+SGIG A A      GA+ V         +   N            + L
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQ-VYGVDKQDKPDLSGNF-----------HFL 50

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            LD++         + +      +DIL N AG             +D       Y+P   
Sbjct: 51  QLDLSDD------LEPLFDWVPSVDILCNTAGI------------LD------DYKP--- 83

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
              LD +                                 W+ I        F+ N+ S 
Sbjct: 84  --LLDTSL------------------------------EEWQHI--------FDTNLTST 103

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPYSGS 260
             L+R      L R + G ++   SIA  V    GA Y+ S
Sbjct: 104 FLLTRAYLPQMLER-KSGIIINMCSIASFVAGGGGAAYTAS 143

Length = 235

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 49.4 bits (118), Expect = 4e-07
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 23/159 (14%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             +VV +TG +SG+G A+  +    GA++ +  +S++ L+ ++       AH  ++  + 
Sbjct: 4   KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA------AHGDAVVGVE 57

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE------DIELEVDRELFTYAY 158
            DV     H+      +  FG +D LI NAG      W+      DI  +   E F   +
Sbjct: 58  GDVRSLDDHKEAVARCVAAFGKIDCLIPNAG-----IWDYSTALVDIPDDRIDEAFDEVF 112

Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 197
             ++    L V      +    A++   G +   I+NAG
Sbjct: 113 HINVKGYLLAV------KAALPALVASRGSVIFTISNAG 145

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 16/95 (16%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLS----ARSSSNLERVKNLCVQAGAHPQSIYT 102
           +V  ITG  SGIG A A +L+  GA +V+         +  + V  L V           
Sbjct: 8   RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPT--------- 58

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 137
              DVT        FD   + +G +DI  NNAG S
Sbjct: 59  ---DVTDEDAVNALFDTAAETYGSVDIAFNNAGIS 90

Length = 255

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 5/103 (4%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
                ++D++  +        +++QFGC D+LINNAG +      ++ L   + + +LN+
Sbjct: 56  KAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNL 115

Query: 221 FSVLSLSR-IATSYFLAREQGGHLVVT-SSIAGIVGAPYSGSY 261
            SV      +       R +GG L++  SSIA     P  G+Y
Sbjct: 116 TSVFQCCSAVLPG---MRARGGGLIINVSSIAARNAFPQWGAY 155

Length = 241

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 50.2 bits (120), Expect = 5e-07
 Identities = 22/97 (22%), Positives = 46/97 (47%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           L +DVT  +  +  F  V   +G +DI++NNAG +  + +E+  L+  +   ++      
Sbjct: 470 LKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYF 529

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            ++R A      +  GG++V  +S   +     + +Y
Sbjct: 530 LVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAY 566

Length = 676

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 49.8 bits (119), Expect = 5e-07
 Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 6/89 (6%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           +VV +TGA+ GIG A   + ++ G ++V++ R   N+ER +      G    +   L +D
Sbjct: 6   RVVLVTGAAGGIGRAACQRFARAGDQVVVADR---NVERARERADSLGPDHHA---LAMD 59

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           V+     R  F+ + ++FG +D+L+NNAG
Sbjct: 60  VSDEAQIREGFEQLHREFGRIDVLVNNAG 88

Length = 520

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 24/83 (28%), Positives = 46/83 (55%)

Query: 179 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE 238
            DA++++ G LD+L+NNAG S  A   +       ++ ELN+ + L +++ A +    + 
Sbjct: 66  VDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQP 125

Query: 239 QGGHLVVTSSIAGIVGAPYSGSY 261
            GG +V   S++G   +P + +Y
Sbjct: 126 GGGSIVNIGSVSGRRPSPGTAAY 148

Length = 252

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 14/93 (15%)

Query: 179 FDAVIQQFGCLDILINNAG---RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFL 235
           FDAV   FG LD L+NNAG    S   A  D++    R +F+ NV      +R A    L
Sbjct: 71  FDAVQSAFGRLDALVNNAGIVAPSMPLA--DMDAARLRRMFDTNVLGAYLCAREAARR-L 127

Query: 236 AREQGGH---LVVTSSIAGIVGAP-----YSGS 260
           + ++GG    +V  SSIA  +G+P     Y+GS
Sbjct: 128 STDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS 160

Length = 248

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 1/86 (1%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           D+T  +   R  +     FG +DIL+NNAG      + ++  E   E F+L + SV+ + 
Sbjct: 58  DLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIV 117

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIV 253
           R        R   G +V  SS+    
Sbjct: 118 RAVLPGMKER-GWGRIVNISSLTVKE 142

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 48.9 bits (117), Expect = 6e-07
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 11/93 (11%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLV-LSARSSSNLERVKNLCVQAGAHPQSIYT 102
             +K V +TGA+ GIG+A    L   GAK V  + R   +     +L  + G     +  
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVR---DPGSAAHLVAKYGD---KVVP 54

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           L LDVT  +       A   Q   +D++INNAG
Sbjct: 55  LRLDVTDPE----SIKAAAAQAKDVDVVINNAG 83

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 7e-07
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV      +R  DA++  FG LD+LI NAG    A  E++  E  R + + N+       
Sbjct: 62  DVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTI 121

Query: 228 RIATSYFLAREQGGHLVVTSSIAGI----VGAPYSGS 260
           + A      +  GG+++  SS+AG      GA Y+ S
Sbjct: 122 KAAVPAL--KRGGGYIINISSLAGTNFFAGGAAYNAS 156

Length = 237

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 48.8 bits (116), Expect = 7e-07
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
           +Y +  DV++ +   R  +  +  FG +DIL+NNAG ++   ++ +  E    + ++N+ 
Sbjct: 58  VYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLS 117

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG 254
           SV + +     Y    E  G ++  SSI G  G
Sbjct: 118 SVFNTTSAVLPYITEAE-EGRIISISSIIGQAG 149

Length = 247

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 48.5 bits (116), Expect = 8e-07
 Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 9/123 (7%)

Query: 135 GRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILIN 194
             + RA  +  EL     + T AY+        DV+  +   + F  + + FG +DILI 
Sbjct: 40  NSAPRAEEKAEELAKKYGVKTKAYK-------CDVSSQESVEKTFKQIQKDFGKIDILIA 92

Query: 195 NAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG-IV 253
           NAG +      D   E   ++ ++N+  V + ++ A   F  +   G L++T+S++G IV
Sbjct: 93  NAGITVHKPALDYTYEQWNKVIDVNLNGVFNCAQAAAKIFKKQ-GKGSLIITASMSGTIV 151

Query: 254 GAP 256
             P
Sbjct: 152 NRP 154

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 8e-07
 Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           KVV ITGAS GIG A A+  +  G  + ++ AR ++  E   +    AG     +     
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAG--- 59

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DV         FDAV   FG LD L+NNAG
Sbjct: 60  DVANEADVIAMFDAVQSAFGRLDALVNNAG 89

Length = 248

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 8e-07
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 5/91 (5%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQ-AGAHPQSIYTL-T 104
           +V  +TGA++G+G   A  L+  GA +VL+ R   NL++ K    +   A P +  TL  
Sbjct: 17  RVAVVTGANTGLGYETAAALAAKGAHVVLAVR---NLDKGKAAAARITAATPGADVTLQE 73

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           LD+T     R   DA+   +  +D+LINNAG
Sbjct: 74  LDLTSLASVRAAADALRAAYPRIDLLINNAG 104

Length = 306

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 48.3 bits (115), Expect = 9e-07
 Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 3/105 (2%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
           P+++    D++  +     F A+  Q   +D+ INNAG ++       + E  +E+F++N
Sbjct: 56  PTLFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVN 115

Query: 220 VFSVLSLSRIATSYFLARE-QGGHLVVTSSIAG--IVGAPYSGSY 261
           V ++   +R A      R    GH++  +S++G  +        Y
Sbjct: 116 VLALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFY 160

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 48.4 bits (116), Expect = 9e-07
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 11/94 (11%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              +VV +TG + GIG  +A      GA +V+  R +   E V        A        
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP--ETVDG----RPAE-----FH 52

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 137
             DV          DA++++ G LD+L+NNAG S
Sbjct: 53  AADVRDPDQVAALVDAIVERHGRLDVLVNNAGGS 86

Length = 252

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 8/101 (7%)

Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
            LDV         F     + G LD +I NAG  + A     +   ++   E N  + L+
Sbjct: 59  ALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALA 118

Query: 226 LSRIATSYFLAREQG-GHLVVTSSIAGIVGAP-----YSGS 260
               A   F  REQG GHLV+ SS++ + G P     Y+ S
Sbjct: 119 QCEAAMEIF--REQGSGHLVLISSVSAVRGLPGVKAAYAAS 157

Length = 248

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           D+T  +      D  + + G +DIL+NNAG      + D+ +   R  +ELNVFS   LS
Sbjct: 68  DITSEQELSALADFALSKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLS 126

Query: 228 RIATSYFLAREQGGHLVVTSSIAG 251
           ++     + +  GG ++  +S+A 
Sbjct: 127 QLVAPE-MEKNGGGVILTITSMAA 149

Length = 255

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 23/89 (25%), Positives = 44/89 (49%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
             +DV+  +   +  D VI ++G +DIL+NNAG     A   +E +    +  +NV  + 
Sbjct: 49  FKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIF 108

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIV 253
            +S+    Y L +++G  + + S  +  V
Sbjct: 109 LMSKYTIPYMLKQDKGVIINIASVQSFAV 137

Length = 258

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 10/110 (9%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            + + ITG SSGIG   A  L   G ++  + R   ++  ++          + +    L
Sbjct: 4   KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA---------EGLEAFQL 54

Query: 106 DVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELEVDRELF 154
           D  + +        V++   G LD L NN    Q  A ED+  E  R  F
Sbjct: 55  DYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQF 104

Length = 277

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 50  W-ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           W ITGASSG G  +  +L   G ++  + R    L+ +K        +   ++ L LDVT
Sbjct: 5   WFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKA------RYGDRLWVLQLDVT 58

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAG 135
            +   R   D      G +D++++NAG
Sbjct: 59  DSAAVRAVVDRAFAALGRIDVVVSNAG 85

Length = 276

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 55/222 (24%), Positives = 79/222 (35%), Gaps = 69/222 (31%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KV+ ITGAS GIG A AL  ++ G  + L+                             
Sbjct: 2   RKVMIITGASRGIGAATALLAAERGYAVCLNYLR-------------------------- 35

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
                  +R   +AV+Q        I   G    A   D+  E D               
Sbjct: 36  -------NRDAAEAVVQA-------IRRQGGEALAVAADVADEADVL------------- 68

Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSVL 224
                      R F+AV ++ G LD L+NNAG    +   E ++      +F  NV    
Sbjct: 69  -----------RLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSF 117

Query: 225 SLSRIATSYFLARE--QGGHLVVTSSIAGIVGAPYSGSYTDH 264
             +R A      R   +GG +V  SS+A  +G+P  G Y D+
Sbjct: 118 LCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP--GEYIDY 157

Length = 248

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 9/107 (8%)

Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
              ++    DV++ +        + ++ G + ILINNAG        ++  E   + FE+
Sbjct: 47  GGKVHYYKCDVSKREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEV 106

Query: 219 NVFSVLSLSRIATSYFL----AREQGGHLVVTSSIAGIVGAPYSGSY 261
           N  +        T  FL     R   GH+V  +S+AG++       Y
Sbjct: 107 NTLAHFWT----TKAFLPDMLERNH-GHIVTIASVAGLISPAGLADY 148

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DVT     R   D  + +FG LDI+ NNAG     A     LE   E FE  V  V    
Sbjct: 59  DVTVEADVRAAVDTAVARFGRLDIMFNNAGVL--GAPCYSILETSLEEFE-RVLDVNVYG 115

Query: 228 RIATSYFLAR----EQGGHLVVTSSIAGIVGAPYSGSYT 262
               +   AR     + G +V  +S+AG+VG     +YT
Sbjct: 116 AFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYT 154

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             K ++ITG+S G+G A A  L   G ++VL ARS       K  C      P +   L 
Sbjct: 6   PMKRIFITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAAC------PGAAGVLI 59

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            D++     R+  D V    G  D +I+NAG
Sbjct: 60  GDLSSLAETRKLADQV-NAIGRFDAVIHNAG 89

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 12/89 (13%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  IT A+ GIG A+AL  ++ GA ++    +  N E++K L    G     I T  LD
Sbjct: 3   KVALITAAAQGIGRAIALAFAREGANVIA---TDINEEKLKELERGPG-----ITTRVLD 54

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           VT     +    A+ ++ G +D+L N AG
Sbjct: 55  VTD----KEQVAALAKEEGRIDVLFNCAG 79

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 27/96 (28%), Positives = 54/96 (56%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
           LD++      +  D +IQ+ G +D+L+NNAG   +A + D++ +  R++F ++V      
Sbjct: 59  LDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLC 118

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           S+IA  + + + QGG ++  +S+      P + +YT
Sbjct: 119 SQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYT 154

Length = 256

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 20/82 (24%), Positives = 34/82 (41%)

Query: 180 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ 239
              ++ FG LDI++NN G +          +   + F  NV +  +L+  A    L    
Sbjct: 79  GQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG 138

Query: 240 GGHLVVTSSIAGIVGAPYSGSY 261
           GG ++  SS  G +      +Y
Sbjct: 139 GGSVINISSTMGRLAGRGFAAY 160

Length = 263

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI-ELEVDRELFELNV 220
           +  +  DVT         DA +++ G LD+L+NNAG   +    D+ + E  R L ++ +
Sbjct: 71  VEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVL-DVTL 129

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAG 251
                 +R A  Y  AR  GG +V  +S+ G
Sbjct: 130 TGTFRATRAALRYMRARGHGGVIVNNASVLG 160

Length = 262

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 17/114 (14%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS-IYTLTL 105
           K ++ITGA+SGIG A AL  +  G ++     + + L  +      A        +T  L
Sbjct: 2   KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAAL------AAELGAGNAWTGAL 55

Query: 106 DVTQTKYHRRCFDAVIQQF-----GCLDILINNAGRSQRAAWEDIELE-VDREL 153
           DVT     R  +DA +  F     G LD+L NNAG  +   +EDI LE  DR +
Sbjct: 56  DVTD----RAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVI 105

Length = 260

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 147 LEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED 206
           LE+  +L  Y Y  + Y L  DV  +         + +++G +D+L+N AG  +  A + 
Sbjct: 36  LELVADLRRYGYPFATYKL--DVADSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDS 93

Query: 207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI 252
           +  E  +  F +N F V ++S+  +     R  G  + V S+ A +
Sbjct: 94  LSDEDWQATFAVNTFGVFNVSQAVSPRMKRRRSGAIVTVGSNAANV 139

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRS--QRAAWEDIELEVDRELFELNVFSVLS 225
           DVT        FD   + +G +DI  NNAG S  +  +  +  L+  + + ++N+ SV  
Sbjct: 59  DVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYL 118

Query: 226 LSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSG-SYT 262
             + A  + + R+  G ++ T+S   ++G+  S  SYT
Sbjct: 119 CCKAALPHMV-RQGKGSIINTASFVAVMGSATSQISYT 155

Length = 255

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 31/77 (40%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 187 GCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG-GHLVV 245
           G LD L NN    Q  A ED+  E  R  FE N F    L+R        R+QG G +V 
Sbjct: 75  GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVM--RKQGQGRIVQ 132

Query: 246 TSSIAGIVGAPYSGSYT 262
            SSI G+V   Y G+Y 
Sbjct: 133 CSSILGLVPMKYRGAYN 149

Length = 277

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           NKV  +T ++ GIG A+A +L++ GA +V+S+R   N++R        G    S+     
Sbjct: 10  NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGL---SVTGTVC 66

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNA 134
            V + +   R     +   G +DIL++NA
Sbjct: 67  HVGKAEDRERLVATAVNLHGGVDILVSNA 95

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 46.4 bits (111), Expect = 3e-06
 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 7/108 (6%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
                +TGA+ GIG+A A +L+K G  ++L +R+   L+ V     +   +     T+  
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEE--KYGVETKTIAA 58

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDI--LINNAGRSQRAAWEDIELEVDR 151
           D +        ++ + ++   LDI  L+NN G S       +E   D 
Sbjct: 59  DFSAGD---DIYERIEKELEGLDIGILVNNVGISHSIPEYFLETPEDE 103

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 46.8 bits (111), Expect = 4e-06
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
            T DV           A + ++G +D+L+NNAGRS   A  ++  E+  ++ E N+  V 
Sbjct: 57  RTCDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVF 116

Query: 225 SLSRIATSYFLAREQG-GHLVVTSSIAG----IVGAPYSGS 260
            +++         E+G G ++  +S  G    +  APYS S
Sbjct: 117 RVTKEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSAS 157

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 2/88 (2%)

Query: 48  VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV 107
           V  + GA  G+G A+A + +  G  + L+AR  + LE +    ++      S   +  D 
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGG--SAKAVPTDA 58

Query: 108 TQTKYHRRCFDAVIQQFGCLDILINNAG 135
                    FD + ++ G L++L+ NAG
Sbjct: 59  RDEDEVIALFDLIEEEIGPLEVLVYNAG 86

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 10/104 (9%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
           P      +D+T  +       A ++Q G LD+L++NAG +      +  ++  R   E+N
Sbjct: 47  PGATPFPVDLTDPE----AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVN 102

Query: 220 VFSVLSLSRIATSYFLA--REQGGHLVVTSSIAGIVGAPYSGSY 261
           V +   L+R+     L   R   GH+V  +S AG+   P  GSY
Sbjct: 103 VVAPAELTRL----LLPALRAAHGHVVFINSGAGLRANPGWGSY 142

Length = 227

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 6e-06
 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 9/104 (8%)

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR-ELFE---- 217
           +  T D+T +         ++ + G +D L+NNAGRS R +   +E   DR   +E    
Sbjct: 423 HAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRS---VENSTDRFHDYERTMA 479

Query: 218 LNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +N F  + L      +   R + GH+V  SSI     AP   +Y
Sbjct: 480 VNYFGAVRLILGLLPHMRER-RFGHVVNVSSIGVQTNAPRFSAY 522

Length = 657

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 10/112 (8%)

Query: 47  KVVWITGAS--SGIGEALALQLSKCGAKLVLS------ARSSSNLERVKNLCVQA--GAH 96
           K+  +TGAS  +GIG A+  +L+  G  +  +            +   + + ++    ++
Sbjct: 6   KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY 65

Query: 97  PQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
                 + +D++Q     R F AV ++ G   ILINNA  S     E++  E
Sbjct: 66  GVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAE 117

Length = 256

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 46.1 bits (109), Expect = 6e-06
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 8/102 (7%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            N KV  ITG ++G+G+ +A+ L+K GA +V        +        Q  A  +  + +
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIV-----GVGVAEAPETQAQVEALGRKFHFI 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 145
           T D+ Q K         ++  G +DILINNAG  +R   +D+
Sbjct: 61  TADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRR---QDL 99

Length = 251

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV       R  D  +++FG +D  +NNAG +    +ED+  E  R +F++N    +  +
Sbjct: 57  DVADAAQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGT 116

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             A  +   R  GG L+   S+ G   AP   +Y
Sbjct: 117 LAALPHLRRR-GGGALINVGSLLGYRSAPLQAAY 149

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 8e-06
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV-DRELFELNVFSV 223
           L  DV+ ++       AVI  FG +DIL+N+AG +  A  ED+  E  D+ + ++N+   
Sbjct: 66  LVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTI-DINLKGS 124

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVG 254
             +++    + +A   GG +V  +S AG+V 
Sbjct: 125 FLMAQAVGRHMIAA-GGGKIVNLASQAGVVA 154

Length = 255

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 45.7 bits (108), Expect = 8e-06
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 11/108 (10%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           +K   +TG   GIG A   + ++ GAK+ +   +    E+V       G + Q+      
Sbjct: 3   DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAF---AC 59

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
           D+T          A  Q  G +D+L+NNAG        +++   WE +
Sbjct: 60  DITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERL 107

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 45.6 bits (108), Expect = 9e-06
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 9/123 (7%)

Query: 144 DIELEVDR---ELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ 200
           DI  E+++   EL    +R     +  DV              ++ G +DIL+NNAG  +
Sbjct: 37  DISPEIEKLADELCGRGHR--CTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCR 94

Query: 201 RAAWEDIELEVDREL-FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG-IVGAPYS 258
             ++ D+  E DR+   ++N+  V ++++      +AR + G +V+ SS+ G +V  P  
Sbjct: 95  LGSFLDMSDE-DRDFHIDINIKGVWNVTKAVLPEMIAR-KDGRIVMMSSVTGDMVADPGE 152

Query: 259 GSY 261
            +Y
Sbjct: 153 TAY 155

Length = 263

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 45.2 bits (107), Expect = 9e-06
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 7/64 (10%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
              V ITGA+SGIG+ LAL  +K G +++   R+ S L+ +            +I+TL  
Sbjct: 1   MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDEL-------HTQSANIFTLAF 53

Query: 106 DVTQ 109
           DVT 
Sbjct: 54  DVTD 57

Length = 240

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 45.3 bits (107), Expect = 9e-06
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT 110
           ITGA+SGIG+A AL ++K G  + +  R+ +  E  +        + Q+I+   +D++  
Sbjct: 6   ITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGN-QNIFLHIVDMSDP 64

Query: 111 KYHRRCFDAVIQQFGCLDILINNAG 135
           K      +   ++   L +LINNAG
Sbjct: 65  KQVWEFVEEFKEEGKKLHVLINNAG 89

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV++ +     F + I++FG LDIL+NNAG    A+  ++ LE   ++ ++N+      +
Sbjct: 61  DVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFLCA 120

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSG 259
           R A   F   +  G ++  SS+   +  P+ G
Sbjct: 121 REAIKRFRKSKIKGKIINMSSVHEKI--PWPG 150

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV+Q +     F AV ++FG LD+L++NA         ++           N+ +++  +
Sbjct: 56  DVSQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCA 115

Query: 228 RIATSYFLAREQGGHLVVTSSI-AGIVGAPY 257
           + A    +    GG +V  SS+ +      Y
Sbjct: 116 QQAAKL-MRERGGGRIVAISSLGSIRALPNY 145

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 13/94 (13%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVL-----SARSSSNLERVKNLCVQAGAHPQSIY 101
           KV  +TGA++G+G A AL L++ GA +V+     +  +S  L+ ++    +A A      
Sbjct: 13  KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAV----- 67

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               D++Q         A     G LDI++NNAG
Sbjct: 68  --AGDISQRATADELV-ATAVGLGGLDIVVNNAG 98

Length = 306

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            +  +TG S GIG A AL L++ G  + ++  ++    + V NL  QAG      + L  
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGG---KAFVLQA 58

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           D++        F A+ Q    L  L+NNAG
Sbjct: 59  DISDENQVVAMFTAIDQHDEPLAALVNNAG 88

Length = 247

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 6/103 (5%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KV  +TG   GIG+ + L   + G K+V    +  + ER  +     G +   ++    
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVF---ADIDEERGADFAEAEGPNLFFVHGDVA 57

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           D T  K+      A++++ G +D+L+NNA R  +     + LE
Sbjct: 58  DETLVKFVVY---AMLEKLGRIDVLVNNAARGSKGILSSLLLE 97

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG---RSQRAAWEDIELEVDRELFELNVF 221
           L LD+T  +  +   ++ +++FG +DILINNA    +   + +E+   E   E+  +N+ 
Sbjct: 57  LELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLG 116

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA 255
                S+ A      ++  G ++  +SI G++  
Sbjct: 117 GAFLCSQ-AFIKLFKKQGKGSIINIASIYGVIAP 149

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 24/97 (24%), Positives = 45/97 (46%)

Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
            LD++           +    G +D+++N AG S     + +  E  R + ++N+   + 
Sbjct: 56  ALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIH 115

Query: 226 LSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           +        +A  +GGHLV  SS AG+V  P+  +Y+
Sbjct: 116 VIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYS 152

Length = 272

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           +VV ITG + GIG A+A + +  G +L++  R +   +++         H     ++  D
Sbjct: 270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL--GDEHL----SVQAD 323

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +T        F  +  ++G LD+L+NNAG
Sbjct: 324 ITDEAAVESAFAQIQARWGRLDVLVNNAG 352

Length = 520

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 41  LNYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
           L+ F+   KV  +TG  +G+G+ +AL L++ G  +V       N+        Q  A  +
Sbjct: 3   LDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIV-----GINIVEPTETIEQVTALGR 57

Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR 139
              +LT D+ +        +  + +FG +DIL+NNAG  +R
Sbjct: 58  RFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRR 98

Length = 253

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  K V + G +SGI   +A   ++ GA + +++RS    E+V     Q          +
Sbjct: 7   FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS---QEKVDAAVAQLQQAGPEGLGV 63

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
           + DV         F  +  +FG +D+L++ A
Sbjct: 64  SADVRDYAAVEAAFAQIADEFGPIDVLVSGA 94

Length = 264

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 17/145 (11%)

Query: 126 CLDILINNAGRSQRAAWEDIELEVDRELF---TYAYRPSIYTLT-LDVTQTKYHRRCFDA 181
              IL             DI+ E   EL       ++    +L  LD+T  +        
Sbjct: 21  VKAILEAGG----IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSK 76

Query: 182 VIQQFGCLDILINNA---GRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE 238
             +++G +D  +N A    +     + D+ L+   E   L++ S    S+    YF  ++
Sbjct: 77  SAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFK-KQ 135

Query: 239 QGGHLVVTSSIAGIVGAP----YSG 259
            GG+LV  SSI G+V AP    Y G
Sbjct: 136 GGGNLVNISSIYGVV-APKFEIYEG 159

Length = 256

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG----AHPQSIYTLTLD 106
           + GASSGIG A A++L+  G  + L AR     E + +     G    A P       LD
Sbjct: 15  VAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFP-------LD 67

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           VT     +       +  G +++L++ AG
Sbjct: 68  VTDPDSVKSFVAQAEEALGEIEVLVSGAG 96

Length = 274

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 10/112 (8%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYTLTL 105
           K + I GA+S I  A A + +  GA+L L+AR    LER+  +L  +      ++ T  L
Sbjct: 2   KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA---VAVSTHEL 58

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGR--SQRAAWEDIELEVDRELFT 155
           D+  T  H    D++       DI++   G    Q A   D  L + RE  T
Sbjct: 59  DILDTASHAAFLDSLPAL---PDIVLIAVGTLGDQAACEADPALAL-REFRT 106

Length = 243

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DVT  +      D  ++ FG +DIL+NNAG    A  ED   E  +++  + +      +
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTT 120

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVG----APY 257
           + A     A+  GG ++  +S+ G+VG    A Y
Sbjct: 121 KAALPIMKAQ-GGGRIINMASVHGLVGSAGKAAY 153

Length = 258

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 11/109 (10%)

Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
              +    LDVT T+        + ++ G +DIL+NNAG ++ + ++ +  +   ++   
Sbjct: 51  EDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINT 110

Query: 219 NVFSVLSLSRIATSYFLA--REQG-GHLVVTSSIAG---IVGAP-YSGS 260
           N+ SV ++    T    A   EQG G ++  SS+ G     G   YS +
Sbjct: 111 NLNSVFNV----TQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAA 155

Length = 245

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 23/93 (24%)

Query: 179 FDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFELNVFSVLSLSRIA 230
               I  FG +DIL+NNAG        +     W+ +          +++     ++R A
Sbjct: 79  VKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLV--------MRVHLKGSFKVTRAA 130

Query: 231 TSYFLAREQG-GHLVVTSSIAGIVG----APYS 258
             Y   R+Q  G ++ TSS AG+ G    A YS
Sbjct: 131 WPYM--RKQKFGRIINTSSAAGLYGNFGQANYS 161

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 21/108 (19%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFEL 218
            DV+         DA +++FG + +L NNAG         +  A WE         +  +
Sbjct: 62  TDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWE--------WVLGV 113

Query: 219 NVFSVLSLSRIATSYFLAR-----EQGGHLVVTSSIAGIVGAPYSGSY 261
           N++ V+   R  T   LA         GH+V T+S+AG++  P  G Y
Sbjct: 114 NLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIY 161

Length = 287

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 23/83 (27%), Positives = 40/83 (48%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           + +D++Q     R F AV ++ G   ILINNA  S     E++  E   + + +NV + +
Sbjct: 72  MEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATM 131

Query: 225 SLSRIATSYFLAREQGGHLVVTS 247
            LS      +  +  G  + +TS
Sbjct: 132 LLSSAFAKQYDGKAGGRIINLTS 154

Length = 256

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 8/111 (7%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVL----SARSSSNLERVKNLCVQAGAHPQSI 100
             KVV I G +  +G  +A  L+  GAK V     SA S ++ E        AGA   + 
Sbjct: 7   KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAF 66

Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI-ELEVD 150
                D+T      + FD     FG  DI IN  G+  +    +I E E D
Sbjct: 67  QA---DLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYD 114

Length = 257

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 1/94 (1%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV   +      D V  ++G LD+L+NNAG          +      +  +NV  V   +
Sbjct: 61  DVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWA 120

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           + A    + R+ GG +V T+S   + G     +Y
Sbjct: 121 KYAIPI-MQRQGGGSIVNTASQLALAGGRGRAAY 153

Length = 252

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 9/90 (10%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVDRELFELNVF 221
           DVT    ++R  D  +  FG LD  + NAG             E ++   D E+F +NV 
Sbjct: 60  DVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFD-EIFNVNVK 118

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAG 251
             L  ++ A      +  GG ++ T S + 
Sbjct: 119 GYLLGAKAALPAL--KASGGSMIFTLSNSS 146

Length = 263

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 11/85 (12%)

Query: 190 DILINNAGRSQRAAWEDIELEVD--RELFELNVFSVLSLSRIATSYFLAREQGGHLVVT- 246
            IL+NN G S       +E   D  +++  +NV + L ++R+     + R++G   +V  
Sbjct: 80  GILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRLILPGMVKRKKG--AIVNI 137

Query: 247 SSIAGIV----GAPYSGS--YTDHL 265
           SS AG++     A YS S  + D  
Sbjct: 138 SSFAGLIPTPLLATYSASKAFLDFF 162

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA-AWEDIELEVDRELFELNVFSV 223
           LT D+ +        +  + +FG +DIL+NNAG  +R  A E  E + D ++  LN+ SV
Sbjct: 62  LTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWD-DVMNLNIKSV 120

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             +S+ A  +F+A+  GG ++  +S+    G     SYT
Sbjct: 121 FFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYT 159

Length = 253

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYTL 103
             K + ITGA   IG AL   + + G  ++ +      L E +++L  +  +  + +  +
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKS--KKLSLV 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNA---GRSQRAAWEDIELE 148
            LD+T  +          +++G +D  +N A    +     + D+ L+
Sbjct: 61  ELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLD 108

Length = 256

>gnl|CDD|236342 PRK08862, PRK08862, short chain dehydrogenase; Provisional

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           + ++ IT A S +G  ++   ++ GA L+L  +  S L+     C        ++Y+  L
Sbjct: 5   SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALT---DNVYSFQL 61

Query: 106 DVTQTKYHRRCFDAVIQQFGC-LDILINN 133
                +  R  FDA+ QQF    D+L+NN
Sbjct: 62  KDFSQESIRHLFDAIEQQFNRAPDVLVNN 90

Length = 227

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 30/117 (25%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSS----------NLERVKNLCVQAGAH 96
            V  +TGA+  IG A+A  L+  G ++V+    S           N  R   + VQA   
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQA--- 57

Query: 97  PQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA--------GRSQRAAWEDI 145
                    D++          A  + FG  D+L+NNA        G+    AW ++
Sbjct: 58  ---------DLSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAEL 105

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 4/95 (4%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-AAWEDI-ELEVDRELFE 217
            +   +  DVT+        +A + +FG LDIL+NNAG + R     ++ E E DR +F 
Sbjct: 51  EAAIAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDR-VFA 109

Query: 218 LNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI 252
           +NV S+   ++    +   +  GG ++  +S AG+
Sbjct: 110 VNVKSIYLSAQALVPHMEEQ-GGGVIINIASTAGL 143

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
            Y   ++ L LDVT +   R   D      G +D++++NAG     A E++     R   
Sbjct: 45  RYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQI 104

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           + N+   + + R A  + L R+ GG +V  SS  G +  P    Y
Sbjct: 105 DTNLIGSIQVIRAALPH-LRRQGGGRIVQVSSEGGQIAYPGFSLY 148

Length = 276

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 43.4 bits (102), Expect = 5e-05
 Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLS--ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           +TG  SGIG A A+  ++ GA + +S       + + VK +  + G   +    L  D++
Sbjct: 54  VTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECG---RKAVLLPGDLS 110

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
             K+ R       +  G LDI+   AG+  + A  DI  ++  E F   +  +++ L
Sbjct: 111 DEKFARSLVHEAHKALGGLDIMALVAGK--QVAIPDIA-DLTSEQFQKTFAINVFAL 164

Length = 294

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE-VDRELFEL 218
           P I  + +D++          +V    G +D+L+NNA  +    + ++  E  DR  F++
Sbjct: 52  PGIEPVCVDLSDWDATEEALGSV----GPVDLLVNNAAVAILQPFLEVTKEAFDRS-FDV 106

Query: 219 NVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV 253
           NV +V+ +S+I     +AR   G +V  SS A   
Sbjct: 107 NVRAVIHVSQIVARGMIARGVPGSIVNVSSQASQR 141

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 17/118 (14%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           + + V +TG S G+G A+A   ++ GA++V++   S   +  + L  + G   ++I  L 
Sbjct: 4   SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE--DAAEALADELG--DRAI-ALQ 58

Query: 105 LDVTQTKYHRRCFDAVIQQFG-CLDILINNA-------GRSQRAA----WEDIELEVD 150
            DVT  +  +  F    + FG  +  ++NNA       G +++ A    WED + +++
Sbjct: 59  ADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLE 116

Length = 253

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 48  VVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQA--GAHPQSIYTLT 104
           V  +TG + GIG ALA  L++  GA+LVL  RS    E        A   A    +  ++
Sbjct: 207 VYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYIS 266

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            DVT     RR  + V +++G +D +I+ AG
Sbjct: 267 ADVTDAAAVRRLLEKVRERYGAIDGVIHAAG 297

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              K V I G S G+G A+A    K GA++ +++R+ + L+R+K    + G     I+ +
Sbjct: 3   LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGN----IHYV 58

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV+ T+  R   +   +    +D L+   G
Sbjct: 59  VGDVSSTESARNVIEKAAKVLNAIDGLVVTVG 90

Length = 238

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 11/92 (11%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  K V + G S GIG A+  +    GA +  +   S   +  + L  + GA   ++ T 
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSK--DAAERLAQETGA--TAVQTD 59

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           + D       R     V+++ G LDIL+ NAG
Sbjct: 60  SAD-------RDAVIDVVRKSGALDILVVNAG 84

Length = 237

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 42.5 bits (101), Expect = 8e-05
 Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 17/102 (16%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFELN 219
           DV+  +   R  D    +FG +DIL+NNAG        R +   W+ +         + N
Sbjct: 63  DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRV--------IDTN 114

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +  V +L++      + + + G ++  SS+ G++G P   +Y
Sbjct: 115 LTGVFNLTKAVARPMMKQ-RSGRIINISSVVGLMGNPGQANY 155

Length = 248

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 42.8 bits (101), Expect = 8e-05
 Identities = 22/83 (26%), Positives = 39/83 (46%)

Query: 180 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ 239
              +++FG LD++INNAG        ++ LE   ++   N+      SR A  YF+  + 
Sbjct: 77  QTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI 136

Query: 240 GGHLVVTSSIAGIVGAPYSGSYT 262
            G+++  SS+   +  P    Y 
Sbjct: 137 KGNIINMSSVHEQIPWPLFVHYA 159

Length = 261

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 9e-05
 Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 21/105 (20%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFELNVFSVLSL 226
           DV    Y +      +++FG LDI  NNAG         ++ LE  RE    N+      
Sbjct: 63  DVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNL------ 116

Query: 227 SRIATSYFL-AREQ--------GGHLVVTSSIAG-IVGAPYSGSY 261
               TS FL A+ Q        GG L+ TS+  G   G P   +Y
Sbjct: 117 ----TSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAY 157

Length = 254

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 41.7 bits (99), Expect = 9e-05
 Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 5/115 (4%)

Query: 47  KVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
               ITG   G+G ALA  L++ GA +LVL +RS  +      L  +  A    +  +  
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVAC 60

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP 160
           DV           A+    G L  +I+ AG         +      E F     P
Sbjct: 61  DVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASL----TPERFAAVLAP 111

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELEVDRELFE 217
           P+I+T+ LDV   +      +A++ ++  LDILINNAG  R         +L+      +
Sbjct: 50  PNIHTIVLDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEID 109

Query: 218 LNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI--VGAP-YSGS 260
            N+   + L +    +   + +   + V+S +A +     P Y  +
Sbjct: 110 TNLIGPIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCAT 155

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 4/97 (4%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELEVDRELFELNVFSVLS 225
           DVT+    +   +  I  +G LD   NNAG    Q    E  E E D  +  +NV  V  
Sbjct: 64  DVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDA-IMGVNVKGVWL 122

Query: 226 LSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             +      LA + GG +V T+S+AG+  AP    Y 
Sbjct: 123 CMKYQIPLMLA-QGGGAIVNTASVAGLGAAPKMSIYA 158

Length = 253

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV+  +       A I ++G  DIL+NNAG    + +    L VD +L +    S    S
Sbjct: 64  DVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPF----LNVDDKLID-KHISTDFKS 118

Query: 228 RIATSYFLARE--QGGHLVVTSSIAGIVGAP 256
            I  S  LA+E  +GG +V  +S+AGI  A 
Sbjct: 119 VIYCSQELAKEMREGGAIVNIASVAGIRPAY 149

Length = 252

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 13/123 (10%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYT 102
           F ++   +TG  SGIG+ +A  L   GA +++  R+   L    + +    GA   ++  
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGA--GAVRY 62

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR---------AAWED-IELEVDRE 152
              DVT      R  DA     G L  +++ AG S+           AW   ++L V+  
Sbjct: 63  EPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGT 122

Query: 153 LFT 155
           ++ 
Sbjct: 123 MYV 125

Length = 276

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGR-SQRAAWEDIELEVDRELFELNVFSVLSL 226
           D+T            +++FG +D L+NNA R        D +    R + ELNV   L L
Sbjct: 62  DITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRL 121

Query: 227 SRIATSYFLAREQGGHLVVTSSIA 250
           ++  T   LA   G  +++ S + 
Sbjct: 122 TQAFTPA-LAESGGSIVMINSMVL 144

Length = 258

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 17/95 (17%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG-------RSQRAAWEDIELEVDRELFELNV 220
           D+T      R    V+ +FG +DIL+N A         S RA W            ++N+
Sbjct: 60  DITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADW--------LAALDVNL 111

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA 255
            S   L++ A  + LAR  GG +V  +SI+     
Sbjct: 112 VSAAMLAQAAHPH-LAR-GGGAIVNFTSISAKFAQ 144

Length = 261

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI---ELEVDRELFELNVFSVL 224
           DVT      R  D  + +FG LDI++NNAG +      DI   EL    ++F++NV  V 
Sbjct: 74  DVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTG-PPCPDIRNVELSEFEKVFDVNVKGVF 132

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            L     +  +   + G +V   S+A  +G     +YT
Sbjct: 133 -LGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYT 169

Length = 280

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 27/94 (28%), Positives = 43/94 (45%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           D++  +  RR   A  + FG LD L+N AG + R    D   E+    F +NV +   L 
Sbjct: 64  DLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLM 123

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           + A      R+  G +V   S++   G P+  +Y
Sbjct: 124 QEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAY 157

Length = 260

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            +   +TGA+ GIG+ALA +    G +++     ++ L    +    A   P     +  
Sbjct: 2   KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVP-----VAC 56

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           D+T              + G +D+L+ NAG
Sbjct: 57  DLTDAASLAAALANAAAERGPVDVLVANAG 86

Length = 257

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 1/105 (0%)

Query: 149 VDRELFTYAYRPSIYTLT-LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 207
           +D              LT LDV      R     ++ + G +D L+N AG  +  A + +
Sbjct: 28  LDLPFVLLLEYGDPLRLTPLDVADAAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPL 87

Query: 208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI 252
             E   + F +NV  V +L +    +   R  G  + V S+ A +
Sbjct: 88  STEDWEQTFAVNVTGVFNLLQAVAPHMKDRRTGAIVTVASNAAHV 132

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 47  KVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           K + ITG ++   I   +A  L + GA+L  + +  +  +RV+ L  + G   +S   L 
Sbjct: 2   KRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLG---ESALVLP 58

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
            DV+  +  +  F  V + +G LD L+++   + +   +   L+  R+ F  A   S Y+
Sbjct: 59  CDVSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYS 118

Query: 165 LT 166
           L 
Sbjct: 119 LV 120

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           N +V  +TGA+ GIG  +A  L   G ++VL     ++L+R +   V A A  ++ + + 
Sbjct: 9   NGRVALVTGAARGIGLGIAAWLIAEGWQVVL-----ADLDRERGSKV-AKALGENAWFIA 62

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +DV            V+ QFG LD L+ NA 
Sbjct: 63  MDVADEAQVAAGVAEVLGQFGRLDALVCNAA 93

Length = 255

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 10/101 (9%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG---AHPQSIYTL 103
           K+V +TG S GIG  +A    + GA++++SAR +             G   A P      
Sbjct: 7   KIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIP------ 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED 144
             D++  +        V ++   LD+L+NNAG +  A  E 
Sbjct: 61  -ADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEA 100

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 15/142 (10%)

Query: 128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG 187
           DI IN+          ++  EV        Y         D+ +   H    D   + FG
Sbjct: 27  DIAIND--LPDDDQATEVVAEVLAAGRRAIYFQ------ADIGELSDHEALLDQAWEDFG 78

Query: 188 CLDILINNAGRSQRAAWEDIELEVDR--ELFELNVFSVLSLSRIATSYFLAR---EQGGH 242
            LD L+NNAG + R   + ++L  D    L  +N+     L++      + +     G H
Sbjct: 79  RLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQAVARRMVEQPDRFDGPH 138

Query: 243 --LVVTSSIAGIVGAPYSGSYT 262
             ++  +SI   + +P  G Y 
Sbjct: 139 RSIIFVTSINAYLVSPNRGEYC 160

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 11/115 (9%)

Query: 144 DIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 203
           DI  E  +EL      P I T  LDVT     +    A+ ++ G +D+L N AG     +
Sbjct: 33  DINEEKLKELERG---PGITTRVLDVTD----KEQVAALAKEEGRIDVLFNCAGFVHHGS 85

Query: 204 WEDIELEVDREL-FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG-IVGAP 256
             D E + D +    LNV S+  + +      LAR + G ++  SS+A  I G P
Sbjct: 86  ILDCE-DDDWDFAMNLNVRSMYLMIKAVLPKMLAR-KDGSIINMSSVASSIKGVP 138

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 21/104 (20%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI-ELEVDRELFELNVFSVLSL 226
           D+T      + FD     FG  DI IN  G+  +    +I E E D E+F +N       
Sbjct: 69  DLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYD-EMFAVN------- 120

Query: 227 SRIATSYFLAREQGGHL--------VVTSSIAGIVG--APYSGS 260
           S+ A  +F  +E G HL        +VTS +       + Y+GS
Sbjct: 121 SKSA--FFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGS 162

Length = 257

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV+ ITGA+SGIG   A   +  GA ++L+ R+ S      +  ++   H   +  +TLD
Sbjct: 2   KVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEE-WHKARVEAMTLD 60

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +   +  +R  +A   +   L +L+ NA 
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAA 89

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 11/90 (12%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSN----LERVKNLCVQAGAHPQSIYTL-TL 105
           +TGAS G+G  LA +L+  GA+++L  R+ +     +  ++       A P +  +L  L
Sbjct: 19  VTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRT------AVPDAKLSLRAL 72

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           D++         + +  +   + +LINNAG
Sbjct: 73  DLSSLASVAALGEQLRAEGRPIHLLINNAG 102

Length = 313

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 22/77 (28%), Positives = 36/77 (46%)

Query: 176 RRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFL 235
           R    A  ++ G +++LINNAG +  A  ED + E    L  LN+ + + L+R       
Sbjct: 68  REAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLR 127

Query: 236 AREQGGHLVVTSSIAGI 252
           A+     + V S+   I
Sbjct: 128 AQPSAMVVNVGSTFGSI 144

Length = 263

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 20/61 (32%), Positives = 32/61 (52%)

Query: 180 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ 239
           + +  + G +DIL+NNAG       +D++    R  +EL VF  + L+R+A     AR  
Sbjct: 73  EQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGS 132

Query: 240 G 240
           G
Sbjct: 133 G 133

Length = 259

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
           T  LDV+      +    ++ + G LD+L+N AG  +  A + +  E  ++ F +N    
Sbjct: 52  TFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGA 111

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIV 253
            +L R     F  + + G +V   S A  V
Sbjct: 112 FNLFRAVMPQFRRQ-RSGAIVTVGSNAAHV 140

Length = 252

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLV-------------LSARSSSNLERVKNLCVQA 93
           KV +ITGA+ G G A A++L+  GA ++                 +  +L+    L    
Sbjct: 4   KVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEAL 63

Query: 94  GAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWE 143
           G   + +     DV      R   +  ++QFG LD+++ NAG  S   +WE
Sbjct: 64  G---RKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWE 111

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 7/117 (5%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            +    ITG   G+G  +A  L+  GA+ LVL +R            +      +    +
Sbjct: 149 LDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSV-V 207

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP 160
             DVT            +   G L  +I+ AG  + A   ++        F      
Sbjct: 208 RCDVTDPAALAALLAE-LAAGGPLAGVIHAAGVLRDALLAEL----TPAAFAAVLAA 259

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           V +T +S GIG  +A +L K GA++V+S+R+  NLE+      + G     +Y +  D++
Sbjct: 3   VLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG----EVYAVKADLS 58

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAG 135
                +       +  G +D L+ NAG
Sbjct: 59  DKDDLKNLVKEAWELLGGIDALVWNAG 85

Length = 259

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K V ITG SSGIG   AL+L + G +++ + R   ++ R+ +L             + LD
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTG---------ILLD 53

Query: 107 VTQTKYHRRCFDAVIQ-QFGCLDILINNAG 135
           +   +   R  D VI      L  L NNAG
Sbjct: 54  LDDPESVERAADEVIALTDNRLYGLFNNAG 83

Length = 256

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 40.3 bits (94), Expect = 5e-04
 Identities = 21/97 (21%), Positives = 44/97 (45%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           + +DVT         D V ++FG +DIL++NAG       E+      +++  ++V    
Sbjct: 61  VAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAF 120

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             ++ A  +    ++GG ++   S+     +P   +Y
Sbjct: 121 LTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAY 157

Length = 262

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 9/93 (9%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           + V ITG S G+GEA+A QL + G  ++  +R+ +     K L   A  +  ++   +LD
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN-----KELTKLAEQYNSNLTFHSLD 56

Query: 107 VTQTKYHRRCFDAV---IQQFGCLDI-LINNAG 135
           +         F+ +   IQ+     I LINNAG
Sbjct: 57  LQDVHELETNFNEILSSIQEDNVSSIHLINNAG 89

Length = 251

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 39.9 bits (93), Expect = 6e-04
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 12/93 (12%)

Query: 176 RRCFDAVIQQFGCLDILINN------AGRSQRAAWEDIELEVDRELFELNVFSVLSLSRI 229
               DAV+Q  G +D+L++N             +  DI     R+ FE       +L + 
Sbjct: 60  EELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADI-----RQAFEALSIFPFALLQA 114

Query: 230 ATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           A +       GG ++  +S        Y+  Y 
Sbjct: 115 AIAQMKKA-GGGSIIFITSAVPKKPLAYNSLYG 146

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 39.9 bits (93), Expect = 6e-04
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 9/93 (9%)

Query: 51  ITGASSGIGEALALQLSKC----GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           +TGAS G G  +A +L+KC    G+ LVLSAR+   L ++K   + A      +  ++LD
Sbjct: 5   VTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKA-EIGAERSGLRVVRVSLD 63

Query: 107 VTQTKYHRRCFDAVIQQFGCLD----ILINNAG 135
           +       +   A+ +          +LINNAG
Sbjct: 64  LGAEAGLEQLLKALRELPRPKGLQRLLLINNAG 96

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 40.2 bits (94), Expect = 7e-04
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 47  KVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
             V ITGASSG+G A A  L++ G   +V++ R   +  + +    + G    S   L  
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACR---DFLKAEQAAQEVGMPKDSYSVLHC 58

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           D+      R+  D   +    LD L+ NA 
Sbjct: 59  DLASLDSVRQFVDNFRRTGRPLDALVCNAA 88

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 17/126 (13%)

Query: 128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG 187
           DI +N     ++ A E ++L           R ++  L  D+    + R+  +  +++ G
Sbjct: 81  DIALNYLPEEEQDAAEVVQLIQA------EGRKAV-ALPGDLKDEAFCRQLVERAVKELG 133

Query: 188 CLDILINNAGRSQRAAWEDIELEVDRELFE----LNVFSVLSLSRIATSYFLAREQGGHL 243
            LDIL+N AG+    A +DI  ++  E F+     NV+++  L + A  +      G  +
Sbjct: 134 GLDILVNIAGKQT--AVKDIA-DITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASI 187

Query: 244 VVTSSI 249
           + T SI
Sbjct: 188 INTGSI 193

Length = 300

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 17/104 (16%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +++ V +TGA+ GIG AL+L+L+  G +++  ARS+                P  ++   
Sbjct: 2   SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSA------------IDDFPGELFACD 49

Query: 105 L-DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIEL 147
           L D+ QT         + +     D ++NN G +       I+L
Sbjct: 50  LADIEQTA---ATLAQINEIHPV-DAIVNNVGIALPQPLGKIDL 89

Length = 234

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 9e-04
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 13/74 (17%)

Query: 182 VIQQFGCLDILINNAGRSQRAA-------WEDIELEVDRELFELNVFSVLSLSRIATSYF 234
           V ++ G +DILINNAGRS R         W D+E         LN ++ L L R      
Sbjct: 111 VEKRIGGVDILINNAGRSIRRPLAESLDRWHDVE-----RTMVLNYYAPLRLIRGLAPGM 165

Query: 235 LAREQGGHLVVTSS 248
           L R   GH++  ++
Sbjct: 166 LERGD-GHIINVAT 178

Length = 293

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 39.3 bits (92), Expect = 9e-04
 Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 1/95 (1%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
            D          FD + ++ G L++L+ NAG +      +    V  +++E+  F     
Sbjct: 56  TDARDEDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLA 115

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +R A    LAR   G ++ T + A + G     ++
Sbjct: 116 AREAAKRMLAR-GRGTIIFTGATASLRGRAGFAAF 149

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 39.0 bits (92), Expect = 9e-04
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 11/117 (9%)

Query: 48  VVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNL---CVQAGAHPQSIYTL 103
              +TG   G+G  LA  L++ GA+ LVL +RS +     + L       GA    +  +
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAE---VTVV 58

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP 160
             DV+     R     +      L  +I+ AG  + A   +    +  E F     P
Sbjct: 59  ACDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLAN----MTAEDFARVLAP 111

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 2/99 (2%)

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
            T+  DVT     +   +  +++FG +D+++ NAG +   +   ++ +  R + ++N+  
Sbjct: 60  LTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLG 119

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           V    R      + R   G+++  SS+A    AP   +Y
Sbjct: 120 VFHTVRATLPALIER--RGYVLQVSSLAAFAAAPGMAAY 156

Length = 296

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV       R FDA    FG +D+L+NNAG        D +LE        N+     + 
Sbjct: 63  DVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVL 122

Query: 228 RIATSYFLAREQGGHLV-VTSSIAGIV---GAPYSGS 260
           R A  +     QGG ++ +++S+  +      PY+ S
Sbjct: 123 REAARHL---GQGGRIINLSTSVIALPLPGYGPYAAS 156

Length = 245

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 22/86 (25%), Positives = 39/86 (45%)

Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
            +DV+         + V  + G  DI++NNAG      + D   E    + ++N++ V+ 
Sbjct: 370 RVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIH 429

Query: 226 LSRIATSYFLAREQGGHLVVTSSIAG 251
             R+     + R  GGH+V  +S A 
Sbjct: 430 GCRLFGRQMVERGTGGHIVNVASAAA 455

Length = 582

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV+Q +      D V  + G +DI + NAG        D+ LE  + L   NV  V   +
Sbjct: 66  DVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTA 125

Query: 228 RIATSYFLAREQGGHLVVTSSIAG-IVGAP 256
           + A    + + QGG ++ T+S++G I+  P
Sbjct: 126 QAAAKAMVKQGQGGVIINTASMSGHIINVP 155

Length = 253

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 10/87 (11%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           V +TGA+ GIG A+A  L + GA ++                V    +   +    LDV 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPF----------VLLLEYGDPLRLTPLDVA 50

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAG 135
                R     ++ + G +D L+N AG
Sbjct: 51  DAAAVREVCSRLLAEHGPIDALVNCAG 77

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 17/107 (15%)

Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLC--------VQA 93
           N    K + I+G + GIG+A+  + ++ G  +  +   +SN+E    +         ++A
Sbjct: 4   NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFT--YNSNVEEANKIAEDLEQKYGIKA 61

Query: 94  GAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 140
            A+P       L++ + + ++  F  + + F  +D  I+NA  S RA
Sbjct: 62  KAYP-------LNILEPETYKELFKKIDEDFDRVDFFISNAIISGRA 101

Length = 260

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 9/63 (14%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K V I GAS GIG     Q    G +++ +AR ++ L  ++ L    GA       L LD
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQAL----GAE-----ALALD 52

Query: 107 VTQ 109
           V  
Sbjct: 53  VAD 55

Length = 222

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 12/98 (12%)

Query: 47  KVVWITGASSGIGEALALQL-----SKCGAKLVLSARSSSNLERVKNLCVQAGA-HPQSI 100
           KVV +TGA+SG+G A+  +L           L+L+ R   NL+R +  C    A HP + 
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACR---NLQRAEAACRALLASHPDAR 58

Query: 101 YTLT---LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
                  +D++           + +++  LD L  NAG
Sbjct: 59  VVFDYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAG 96

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 3/95 (3%)

Query: 41  LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
           ++ F  +   ITG +SGIG A   + ++ GA++VL       L +  N     G     +
Sbjct: 1   MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGF---DV 57

Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           + +  DV   +      D   +  G +D++ +NAG
Sbjct: 58  HGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAG 92

Length = 275

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 5/107 (4%)

Query: 143 EDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 202
           +D ++++  EL     + S  ++ LD+TQ    +   + V +Q G   IL+NNA  S   
Sbjct: 53  QDEQIQLQEELLKNGVKVS--SMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNN 110

Query: 203 AWEDIELE-VDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSS 248
            + ++  E +D+    +NV +   LS    +    ++ GG ++  +S
Sbjct: 111 DFSNLTAEELDKHYM-VNVRATTLLS-SQFARGFDKKSGGRIINMTS 155

Length = 256

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 17/128 (13%)

Query: 41  LNYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLE-----------RVK 87
           +N   NKV  +TG S   GIG A+  +L++ GA +  +  ++ + E           +++
Sbjct: 1   MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQ 60

Query: 88  NLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIEL 147
              ++ G     + ++ LD+TQ    +   + V +Q G   IL+NNA  S    + ++  
Sbjct: 61  EELLKNGV---KVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTA 117

Query: 148 E-VDRELF 154
           E +D+   
Sbjct: 118 EELDKHYM 125

Length = 256

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 23/116 (19%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT 110
           I GA+ GIG ALA  L+  G +L+LS R +  L     L  + GA          DV   
Sbjct: 3   ILGATGGIGRALARALAGRGWRLLLSGRDAGALA---GLAAEVGA-----LARPADVA-- 52

Query: 111 KYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFTYAY 158
                   A+ Q+ G LD+L+  AG        R++ AAW  I   +D  L   A 
Sbjct: 53  --AELEVWALAQELGPLDLLVYAAGAILGKPLARTKPAAWRRI---LDANLTGAAL 103

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K   +TG  SG+G      L++ GA +++ AR              AG     +  + LD
Sbjct: 27  KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVARE-----ALAGIDGVEV--VMLD 79

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +   +  R   +  +     +DILINNAG
Sbjct: 80  LADLESVRAFAERFLDSGRRIDILINNAG 108

Length = 315

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 179 FDAVIQQFGCLDILINNAGRS-QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAR 237
           F  + ++ G LDIL+NNA  +       D +L   ++  ++N+     +S  A    L +
Sbjct: 76  FAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGK--LMK 133

Query: 238 EQGGHLVV-TSSIAGIVGAPYSGSYT 262
           EQGG  +V  +S+ G+    + G Y+
Sbjct: 134 EQGGGSIVNVASVNGVSPGDFQGIYS 159

Length = 252

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 9/95 (9%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
           ++T+  DV      ++  + V ++FG +D+L+NNAG      +E+ + E   ++ ++N+ 
Sbjct: 53  VFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLN 112

Query: 222 SVLSLSRIATSY----FLAREQGGHLVVTSSIAGI 252
                  I T+Y     L   + G +V  +S AGI
Sbjct: 113 GA-----IYTTYEFLPLLKLSKNGAIVNIASNAGI 142

Length = 255

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 9/90 (10%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVDRELFELNVF 221
           DV     + R     +++FG LD  I NAG             E ++   D ELF +NV 
Sbjct: 58  DVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFD-ELFHINVK 116

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAG 251
             +  ++ A     A E  G ++ T S AG
Sbjct: 117 GYILGAKAALPALYATE--GSVIFTVSNAG 144

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 179 FDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAR 237
           F  +  ++G LD+L+NNAG         +   E    ++++N+    + +R A       
Sbjct: 334 FAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAAR---LM 390

Query: 238 EQGGHLVVTSSIAGIVGAPYSGSY 261
            QGG +V   SIA ++  P   +Y
Sbjct: 391 SQGGVIVNLGSIASLLALPPRNAY 414

Length = 520

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 8/104 (7%)

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRE----LFEL 218
           + +T D+ Q K         ++  G +DILINNAG  +R   +D+ LE   +    +  +
Sbjct: 58  HFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRR---QDL-LEFGNKDWDDVINI 113

Query: 219 NVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           N  +V  LS+     F+ +  GG ++  +S+    G     SYT
Sbjct: 114 NQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYT 157

Length = 251

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 140 AAWEDIELEVDREL---FTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA 196
           A  + +  ++D E    F  A  P+++ +  DV      +    A++++ G +D+L+NNA
Sbjct: 24  AGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADETLVKFVVYAMLEKLGRIDVLVNNA 83

Query: 197 GRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP 256
            R  +     + LE    +  +N+     LSR         +  G ++  +S       P
Sbjct: 84  ARGSKGILSSLLLEEWDRILSVNLTGPYELSRYCRDEL--IKNKGRIINIASTRAFQSEP 141

Query: 257 YSGSYT 262
            S +Y 
Sbjct: 142 DSEAYA 147

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 38.3 bits (90), Expect = 0.002
 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 6/114 (5%)

Query: 53  GASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTK 111
              + I  A+A   ++ GA++VL+    +  +  V  L   A   P  +  L  DVT  +
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDEL---AKELPADVIPL--DVTSDE 57

Query: 112 YHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
                F+ V +  G +D L+++   S         L+  RE F  A   S Y+ 
Sbjct: 58  DIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSF 111

Length = 239

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 25/136 (18%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL-DVTQ 109
           +TGAS GIGE +A  L   GA + L     + +E+++ L  + G   + I+   L D  +
Sbjct: 11  VTGASGGIGEEIARLLHAQGAIVGLHG---TRVEKLEALAAELGERVK-IFPANLSDRDE 66

Query: 110 TKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFTYAYRPS 161
            K   +  +A       +DIL+NNAG        R     W D  LEV+    T  +R  
Sbjct: 67  VKALGQKAEA---DLEGVDILVNNAGITKDGLFVRMSDEDW-DSVLEVN---LTATFR-- 117

Query: 162 IYTLTLDVTQTKYHRR 177
              LT ++T     RR
Sbjct: 118 ---LTRELTHPMMRRR 130

Length = 245

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 14/41 (34%), Positives = 27/41 (65%)

Query: 47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVK 87
          K+ + T +S GIG  +A  L++ GA ++L +R+  NL++ +
Sbjct: 9  KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAR 49

Length = 263

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDV 107
           V +TGAS GIG A+A +L+  G ++ +   S  S+ E V +     G    +   L  DV
Sbjct: 1   VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGG---NARLLQFDV 57

Query: 108 TQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW 142
                 R   +A I + G    ++ NAG ++ AA+
Sbjct: 58  ADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAF 92

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 6/101 (5%)

Query: 165 LTLDVTQTKYHRRCFDAVIQ--QFGCLDILINNAGR-SQRAAWEDIELEVDRELFELNVF 221
           L LDVT         +AV +      LD+LINNAG         +++ E   E+F++NV 
Sbjct: 52  LELDVT--DEIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVL 109

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             L L++ A    L +     ++  SS  G +G   SG + 
Sbjct: 110 GPLLLTQ-AFLPLLLKGARAKIINISSRVGSIGDNTSGGWY 149

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 45  NNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
             K + I G ++   I   +A  L++ GA+L  + +     +RV+ L  + G+       
Sbjct: 5   EGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSD----LV 60

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
           L  DVT  +     F  + +++G LD L+++   + +   +   L+  RE F  A   S 
Sbjct: 61  LPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISA 120

Query: 163 YTLT 166
           Y+ T
Sbjct: 121 YSFT 124

Length = 259

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 39/150 (26%)

Query: 21  FLLAVDCDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS 80
           F   +   +Y++F+ +  K L  + +  + +TG + GIG+  A QL++ G  LVL AR+ 
Sbjct: 30  FFFTILNWVYVYFL-RPAKNLKKYGSWAL-VTGPTDGIGKGFAFQLARKGLNLVLVARNP 87

Query: 81  SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLD----------- 128
             L+ V                   D  Q+KY +     V+  F G +D           
Sbjct: 88  DKLKDVS------------------DSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE 129

Query: 129 -----ILINNAGRSQRAAWEDIELEVDREL 153
                +LINN G S   A      EVD EL
Sbjct: 130 GLDVGVLINNVGVSYPYA--RFFHEVDEEL 157

Length = 320

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 18/96 (18%)

Query: 49  VWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV 107
           V I GAS G+G   A+Q++K  GA +     S+ N E V++L    GA         +D 
Sbjct: 147 VLINGASGGVG-TFAVQIAKALGAHVTGVC-STRNAELVRSL----GA------DEVIDY 194

Query: 108 TQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE 143
           T   +         +++   D++ +  G S  + + 
Sbjct: 195 TTEDFVALTAGG--EKY---DVIFDAVGNSPFSLYR 225

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           N+V  + G    +GE L   L++ G  + ++  +S N E+V +       + +  Y    
Sbjct: 2   NQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVAD--EINAEYGEKAYGFGA 59

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           D T  +        V + F  +D+L+ +AG ++ A   D EL 
Sbjct: 60  DATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELG 102

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           ++ ++TG   GIG ++  +L K G K+V  A    N  R         A          +
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVV--AGCGPNSPRRVKWLEDQKALGFDFIASEGN 61

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
           V      +  FD V  + G +D+L+NNAG        +  R  W  +
Sbjct: 62  VGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAV 108

Length = 246

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT 110
           + G SSGIG ALA   +  GA++ +++RS   L        +A      + T  LD+T  
Sbjct: 2   VVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAA----ARALGGGAPVRTAALDITDE 57

Query: 111 KYHRRCFDAV 120
                 F   
Sbjct: 58  AAVDAFFAEA 67

Length = 230

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 2/96 (2%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELEVDRE 214
           A  P I+T   DV      R   + + +++  L++LINNAG  R++     +  L+   +
Sbjct: 47  AENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQ 106

Query: 215 LFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA 250
               N+ + + L+ +   + L + +   + V+S +A
Sbjct: 107 EIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLA 142

Length = 245

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
              +  DV+  +  +     V  + G +D+L+NNAG ++ A ++ +  E    + + N+ 
Sbjct: 52  FRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLN 111

Query: 222 SVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVG 254
           SV ++++        RE+G G ++  SS+ G  G
Sbjct: 112 SVFNVTQPVIDGM--RERGWGRIINISSVNGQKG 143

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 25/120 (20%), Positives = 53/120 (44%), Gaps = 14/120 (11%)

Query: 123 QFGCLDILIN--NAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFD 180
           ++G  +I+IN   A R++ A           +L     +   +    +VT  +      +
Sbjct: 31  EYGA-EIIINDITAERAELAV---------AKLRQEGIKA--HAAPFNVTHKQEVEAAIE 78

Query: 181 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG 240
            + +  G +D+LINNAG  +R  + +   +   ++  +N  +V  +S+    Y + R+ G
Sbjct: 79  HIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAG 138

Length = 254

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 28/89 (31%)

Query: 184 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN------VFSV-----LSLSRIATS 232
              G LDI++NNAG ++           DR LF ++      V +V       L+R A +
Sbjct: 85  VGLGGLDIVVNNAGITR-----------DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA 133

Query: 233 YFLAREQG------GHLVVTSSIAGIVGA 255
           Y+ A+ +       G +V TSS AG+VG 
Sbjct: 134 YWRAKAKAAGGPVYGRIVNTSSEAGLVGP 162

Length = 306

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	265
KOG1205|consensus	282		100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1201|consensus	300		100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.96
PRK08339	263	short chain dehydrogenase; Provisional	99.96
PRK06484	520	short chain dehydrogenase; Validated	99.96
PRK05876	275	short chain dehydrogenase; Provisional	99.96
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.96
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
KOG0725|consensus	270		99.96
PRK06139	330	short chain dehydrogenase; Provisional	99.96
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK07062	265	short chain dehydrogenase; Provisional	99.95
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK07791	286	short chain dehydrogenase; Provisional	99.95
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK07063	260	short chain dehydrogenase; Provisional	99.95
KOG1200|consensus	256		99.95
PRK07478	254	short chain dehydrogenase; Provisional	99.95
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.95
KOG1610|consensus	322		99.95
KOG1014|consensus	312		99.95
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK08589	272	short chain dehydrogenase; Validated	99.95
PRK08303	305	short chain dehydrogenase; Provisional	99.95
PRK05867	253	short chain dehydrogenase; Provisional	99.95
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.95
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.95
PRK05872	296	short chain dehydrogenase; Provisional	99.95
PLN02780	320	ketoreductase/ oxidoreductase	99.95
PRK06398	258	aldose dehydrogenase; Validated	99.95
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK08862	227	short chain dehydrogenase; Provisional	99.95
PRK07109	334	short chain dehydrogenase; Provisional	99.95
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.94
PRK06114	254	short chain dehydrogenase; Provisional	99.94
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK05599	246	hypothetical protein; Provisional	99.94
PRK06194	287	hypothetical protein; Provisional	99.94
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.94
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.94
PRK05854	313	short chain dehydrogenase; Provisional	99.94
PRK08265	261	short chain dehydrogenase; Provisional	99.94
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.94
PRK07825	273	short chain dehydrogenase; Provisional	99.94
KOG4169|consensus	261		99.94
PRK07677	252	short chain dehydrogenase; Provisional	99.94
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.94
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.94
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.94
PLN02253	280	xanthoxin dehydrogenase	99.94
PRK08278	273	short chain dehydrogenase; Provisional	99.94
KOG1208|consensus	314		99.93
PRK09242	257	tropinone reductase; Provisional	99.93
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.93
PRK08643	256	acetoin reductase; Validated	99.93
PRK05855	582	short chain dehydrogenase; Validated	99.93
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.93
PRK12747	252	short chain dehydrogenase; Provisional	99.93
PRK07035	252	short chain dehydrogenase; Provisional	99.93
PRK05866	293	short chain dehydrogenase; Provisional	99.93
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.93
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.93
PRK06172	253	short chain dehydrogenase; Provisional	99.93
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.93
PRK07856	252	short chain dehydrogenase; Provisional	99.93
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.93
PRK07024	257	short chain dehydrogenase; Provisional	99.93
PRK07814	263	short chain dehydrogenase; Provisional	99.93
PRK05717	255	oxidoreductase; Validated	99.93
PRK06182	273	short chain dehydrogenase; Validated	99.93
PRK07576	264	short chain dehydrogenase; Provisional	99.93
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK06128	300	oxidoreductase; Provisional	99.93
PRK05993	277	short chain dehydrogenase; Provisional	99.93
PRK07067	257	sorbitol dehydrogenase; Provisional	99.93
PRK07985	294	oxidoreductase; Provisional	99.93
KOG1210|consensus	331		99.93
KOG1209|consensus	289		99.93
PRK07831	262	short chain dehydrogenase; Provisional	99.93
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.93
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK12743	256	oxidoreductase; Provisional	99.92
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.92
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.92
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.92
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.92
PRK07890	258	short chain dehydrogenase; Provisional	99.92
PRK06180	277	short chain dehydrogenase; Provisional	99.92
PRK05650	270	short chain dehydrogenase; Provisional	99.92
PRK06125	259	short chain dehydrogenase; Provisional	99.92
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.92
PRK06483	236	dihydromonapterin reductase; Provisional	99.92
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK06841	255	short chain dehydrogenase; Provisional	99.92
PRK07904	253	short chain dehydrogenase; Provisional	99.92
PRK08703	239	short chain dehydrogenase; Provisional	99.92
PRK07832	272	short chain dehydrogenase; Provisional	99.92
PRK06179	270	short chain dehydrogenase; Provisional	99.92
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.92
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.92
PRK06197	306	short chain dehydrogenase; Provisional	99.92
PRK08226	263	short chain dehydrogenase; Provisional	99.92
PRK08263	275	short chain dehydrogenase; Provisional	99.92
PRK06523	260	short chain dehydrogenase; Provisional	99.92
PRK08251	248	short chain dehydrogenase; Provisional	99.92
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.92
PRK08628	258	short chain dehydrogenase; Provisional	99.92
PRK06138	252	short chain dehydrogenase; Provisional	99.91
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.91
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK12939	250	short chain dehydrogenase; Provisional	99.91
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.91
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.91
PLN00015	308	protochlorophyllide reductase	99.91
PRK06500	249	short chain dehydrogenase; Provisional	99.91
PRK07454	241	short chain dehydrogenase; Provisional	99.91
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK09072	263	short chain dehydrogenase; Provisional	99.91
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.91
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.91
PRK06949	258	short chain dehydrogenase; Provisional	99.91
PRK06198	260	short chain dehydrogenase; Provisional	99.91
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.91
PRK08267	260	short chain dehydrogenase; Provisional	99.91
PRK09134	258	short chain dehydrogenase; Provisional	99.91
PRK09186	256	flagellin modification protein A; Provisional	99.91
PRK05693	274	short chain dehydrogenase; Provisional	99.91
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.91
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.91
PRK06196	315	oxidoreductase; Provisional	99.9
PRK07774	250	short chain dehydrogenase; Provisional	99.9
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
KOG1207|consensus	245		99.9
COG1028	251	FabG Dehydrogenases with different specificities (	99.9
PRK06482	276	short chain dehydrogenase; Provisional	99.9
PRK12744	257	short chain dehydrogenase; Provisional	99.9
PRK07069	251	short chain dehydrogenase; Validated	99.9
PRK06701	290	short chain dehydrogenase; Provisional	99.9
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.9
PRK06914	280	short chain dehydrogenase; Provisional	99.9
PRK07775	274	short chain dehydrogenase; Provisional	99.9
PRK05875	276	short chain dehydrogenase; Provisional	99.9
PRK06057	255	short chain dehydrogenase; Provisional	99.9
PRK12937	245	short chain dehydrogenase; Provisional	99.9
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.9
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.9
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.9
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.9
PRK07201	657	short chain dehydrogenase; Provisional	99.9
PRK12746	254	short chain dehydrogenase; Provisional	99.9
PRK10538	248	malonic semialdehyde reductase; Provisional	99.89
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.89
PRK06123	248	short chain dehydrogenase; Provisional	99.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.89
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.89
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.89
KOG1199|consensus	260		99.89
PRK07102	243	short chain dehydrogenase; Provisional	99.89
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK12827	249	short chain dehydrogenase; Provisional	99.89
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK06940	275	short chain dehydrogenase; Provisional	99.89
PRK06181	263	short chain dehydrogenase; Provisional	99.89
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK07326	237	short chain dehydrogenase; Provisional	99.89
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.88
PRK12742	237	oxidoreductase; Provisional	99.88
PRK12367	245	short chain dehydrogenase; Provisional	99.88
PRK09291	257	short chain dehydrogenase; Provisional	99.88
PRK06101	240	short chain dehydrogenase; Provisional	99.88
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK12828	239	short chain dehydrogenase; Provisional	99.88
PRK08324	681	short chain dehydrogenase; Validated	99.87
PRK12829	264	short chain dehydrogenase; Provisional	99.87
PRK06924	251	short chain dehydrogenase; Provisional	99.87
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.87
PRK09135	249	pteridine reductase; Provisional	99.87
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK07074	257	short chain dehydrogenase; Provisional	99.87
KOG1611|consensus	249		99.87
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.87
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK05884	223	short chain dehydrogenase; Provisional	99.86
PRK08264	238	short chain dehydrogenase; Validated	99.86
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK07060	245	short chain dehydrogenase; Provisional	99.86
PRK07023	243	short chain dehydrogenase; Provisional	99.86
PRK07578	199	short chain dehydrogenase; Provisional	99.85
PRK08017	256	oxidoreductase; Provisional	99.85
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.85
PRK07577	234	short chain dehydrogenase; Provisional	99.85
PRK07806	248	short chain dehydrogenase; Provisional	99.84
PRK08177	225	short chain dehydrogenase; Provisional	99.84
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.84
PRK07041	230	short chain dehydrogenase; Provisional	99.83
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.83
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.83
PRK06720	169	hypothetical protein; Provisional	99.82
PRK06953	222	short chain dehydrogenase; Provisional	99.82
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.81
KOG1478|consensus	341		99.8
PRK08219	227	short chain dehydrogenase; Provisional	99.79
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.77
KOG1204|consensus	253		99.72
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.68
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.61
PRK06484	520	short chain dehydrogenase; Validated	99.6
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.55
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.54
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.54
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.53
PLN02653	340	GDP-mannose 4,6-dehydratase	99.51
PLN03209	576	translocon at the inner envelope of chloroplast su	99.51
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.39
PLN02240	352	UDP-glucose 4-epimerase	99.39
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.38
PLN02583	297	cinnamoyl-CoA reductase	99.38
PLN00198	338	anthocyanidin reductase; Provisional	99.38
PLN02572	442	UDP-sulfoquinovose synthase	99.37
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.34
PLN02214	342	cinnamoyl-CoA reductase	99.34
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.33
PLN02650	351	dihydroflavonol-4-reductase	99.29
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.25
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.25
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.21
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.18
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.18
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.17
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.16
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.14
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.14
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.09
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.01
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.0
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.98
KOG1502|consensus	327		98.98
PRK08309	177	short chain dehydrogenase; Provisional	98.94
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.9
PLN02686	367	cinnamoyl-CoA reductase	98.85
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.85
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.83
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.79
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.78
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.76
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.73
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.71
PLN02427	386	UDP-apiose/xylose synthase	98.69
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.69
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.69
PLN02260	668	probable rhamnose biosynthetic enzyme	98.68
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	98.67
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.67
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.63
CHL00194	317	ycf39 Ycf39; Provisional	98.62
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.61
PRK05865	854	hypothetical protein; Provisional	98.58
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.58
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.57
PLN02206	442	UDP-glucuronate decarboxylase	98.55
PRK07201	657	short chain dehydrogenase; Provisional	98.53
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	98.53
KOG1371|consensus	343		98.52
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.46
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.44
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.4
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.38
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.36
PLN02503	605	fatty acyl-CoA reductase 2	98.3
PLN02778	298	3,5-epimerase/4-reductase	98.29
PLN02996	491	fatty acyl-CoA reductase	98.25
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.24
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.21
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.2
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.14
PRK12320	699	hypothetical protein; Provisional	98.05
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.97
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.95
PLN02260	668	probable rhamnose biosynthetic enzyme	97.94
KOG1202|consensus	2376		97.94
PRK14982	340	acyl-ACP reductase; Provisional	97.89
KOG1430|consensus	361		97.88
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	97.88
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.77
KOG4169|consensus	261		97.77
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	97.74
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	97.71
PLN00016	378	RNA-binding protein; Provisional	97.7
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.7
KOG2733|consensus	423		97.65
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.62
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.61
KOG1221|consensus	467		97.54
PRK09620	229	hypothetical protein; Provisional	97.5
COG3320	382	Putative dehydrogenase domain of multifunctional n	97.42
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.33
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.32
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.27
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.26
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.22
KOG1205|consensus	282		97.17
KOG1199|consensus	260		97.09
PTZ00325	321	malate dehydrogenase; Provisional	97.09
KOG1201|consensus	300		97.02
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.01
KOG4022|consensus	236		97.0
KOG0725|consensus	270		96.97
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.85
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.83
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.82
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.81
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.76
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.75
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	96.73
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	96.7
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.69
PRK06849	389	hypothetical protein; Provisional	96.69
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	96.69
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.68
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.65
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.64
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.64
PRK06914	280	short chain dehydrogenase; Provisional	96.64
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.63
PLN00106	323	malate dehydrogenase	96.6
PRK10669	558	putative cation:proton antiport protein; Provision	96.59
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.53
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.53
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	96.51
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.43
KOG1429|consensus	350		96.42
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.4
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.38
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.36
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.36
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.3
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.29
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.26
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.25
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.19
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.19
COG2910	211	Putative NADH-flavin reductase [General function p	96.17
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.16
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.12
PRK14968	188	putative methyltransferase; Provisional	96.12
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.08
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.08
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.04
KOG1203|consensus	411		96.02
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.01
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.99
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.96
PRK13243	333	glyoxylate reductase; Reviewed	95.96
PRK07791	286	short chain dehydrogenase; Provisional	95.95
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.95
PRK13886	241	conjugal transfer protein TraL; Provisional	95.83
PRK05867	253	short chain dehydrogenase; Provisional	95.82
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.79
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.75
PRK05876	275	short chain dehydrogenase; Provisional	95.72
KOG2865|consensus	391		95.71
COG0300	265	DltE Short-chain dehydrogenases of various substra	95.7
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.7
PLN03139	386	formate dehydrogenase; Provisional	95.66
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	95.64
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.61
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.6
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.54
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.53
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.51
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.47
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.45
PRK12747	252	short chain dehydrogenase; Provisional	95.44
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.43
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.43
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.4
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.38
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.37
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.35
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.33
PRK07574	385	formate dehydrogenase; Provisional	95.31
PRK04148	134	hypothetical protein; Provisional	95.28
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.26
PRK05086	312	malate dehydrogenase; Provisional	95.26
PRK06139	330	short chain dehydrogenase; Provisional	95.26
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.21
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.2
PRK06720	169	hypothetical protein; Provisional	95.17
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.08
PRK08655	437	prephenate dehydrogenase; Provisional	95.06
PRK09496	453	trkA potassium transporter peripheral membrane com	95.03
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	94.99
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.97
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.96
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.95
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	94.94
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.94
KOG1198|consensus	347		94.9
KOG1200|consensus	256		94.89
PRK06194	287	hypothetical protein; Provisional	94.87
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.87
PRK06114	254	short chain dehydrogenase; Provisional	94.84
PTZ00117	319	malate dehydrogenase; Provisional	94.79
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	94.78
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.76
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.72
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	94.71
PRK07063	260	short chain dehydrogenase; Provisional	94.64
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.64
PRK12480	330	D-lactate dehydrogenase; Provisional	94.61
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.61
PRK07109	334	short chain dehydrogenase; Provisional	94.61
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.56
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.52
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	94.51
PRK08589	272	short chain dehydrogenase; Validated	94.49
PRK06487	317	glycerate dehydrogenase; Provisional	94.43
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.37
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	94.37
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.37
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.36
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	94.33
PRK08643	256	acetoin reductase; Validated	94.31
PRK07062	265	short chain dehydrogenase; Provisional	94.31
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.3
PTZ00082	321	L-lactate dehydrogenase; Provisional	94.29
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.22
PLN02602	350	lactate dehydrogenase	94.2
PRK08085	254	gluconate 5-dehydrogenase; Provisional	94.16
TIGR03029	274	EpsG chain length determinant protein tyrosine kin	94.14
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	94.13
PRK05872	296	short chain dehydrogenase; Provisional	94.12
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.12
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.11
PLN00203	519	glutamyl-tRNA reductase	94.1
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	94.09
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.09
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.08
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.06
PRK10537	393	voltage-gated potassium channel; Provisional	94.05
PRK06436	303	glycerate dehydrogenase; Provisional	94.05
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.04
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	94.03
PLN02928	347	oxidoreductase family protein	94.02
PRK05855	582	short chain dehydrogenase; Validated	94.02
PRK08339	263	short chain dehydrogenase; Provisional	94.01
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	94.01
COG3268	382	Uncharacterized conserved protein [Function unknow	93.97
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	93.96
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.95
PRK07677	252	short chain dehydrogenase; Provisional	93.93
PLN02740	381	Alcohol dehydrogenase-like	93.93
TIGR03018	207	pepcterm_TyrKin exopolysaccharide/PEPCTERM locus t	93.92
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	93.92
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	93.92
PRK07478	254	short chain dehydrogenase; Provisional	93.91
KOG1478|consensus	341		93.91
PTZ00354	334	alcohol dehydrogenase; Provisional	93.9
KOG1372|consensus	376		93.9
PRK08862	227	short chain dehydrogenase; Provisional	93.85
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	93.85
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	93.74
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	93.74
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	93.71
PRK06932	314	glycerate dehydrogenase; Provisional	93.67
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	93.65
PLN00112	444	malate dehydrogenase (NADP); Provisional	93.64
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	93.63
COG1028	251	FabG Dehydrogenases with different specificities (	93.62
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	93.61
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	93.6
PRK13771	334	putative alcohol dehydrogenase; Provisional	93.6
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	93.56
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	93.55
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	93.54
PRK06128	300	oxidoreductase; Provisional	93.54
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	93.53
PRK05599	246	hypothetical protein; Provisional	93.48
KOG0069|consensus	336		93.45
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	93.45
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	93.45
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	93.43
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	93.36
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	93.35
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	93.33
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	93.29
PRK08223	287	hypothetical protein; Validated	93.26
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.26
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	93.25
PLN00015	308	protochlorophyllide reductase	93.24

>KOG1205|consensus

Probab=100.00  E-value=2.5e-36  Score=263.81  Aligned_cols=163  Identities=40%  Similarity=0.574  Sum_probs=145.6

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .++..+.||+|+|||||+|||+++|++|++.|++++++.|+.++++++.+++++..... ++++++||++|.+++.++  
T Consensus         5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~--   81 (282)
T KOG1205|consen    5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKF--   81 (282)
T ss_pred             ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHH--
Confidence            45678899999999999999999999999999999999999999999989888877544 688888888888888888  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|+||||||+
T Consensus        82 ------------------------------------------------------------~~~~~~~fg~vDvLVNNAG~  101 (282)
T KOG1205|consen   82 ------------------------------------------------------------VEWAIRHFGRVDVLVNNAGI  101 (282)
T ss_pred             ------------------------------------------------------------HHHHHHhcCCCCEEEecCcc
Confidence                                                                        66666667777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ......++.+.+++.++|++|++|+.+++|+++|+|++++ +||||++||++|..+.|..+.|+|||
T Consensus       102 ~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~~~~Y~ASK  167 (282)
T KOG1205|consen  102 SLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPFRSIYSASK  167 (282)
T ss_pred             ccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCcccccchHH
Confidence            7666677888899999999999999999999999999887 89999999999999999999999998

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3e-36  Score=255.35  Aligned_cols=157  Identities=34%  Similarity=0.463  Sum_probs=141.2

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |..+.+|+++|||||+|||.++|++|+++|++|++++|+.++++++..++.+     .+++++.+|++|+++++++    
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-----~~~~~~~~DVtD~~~~~~~----   71 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-----GAALALALDVTDRAAVEAA----   71 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-----CceEEEeeccCCHHHHHHH----
Confidence            3566789999999999999999999999999999999999999888877643     4678888888888888888    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++.+.+.|+++|+||||||...
T Consensus        72 ----------------------------------------------------------i~~~~~~~g~iDiLvNNAGl~~   93 (246)
T COG4221          72 ----------------------------------------------------------IEALPEEFGRIDILVNNAGLAL   93 (246)
T ss_pred             ----------------------------------------------------------HHHHHHhhCcccEEEecCCCCc
Confidence                                                                      7777777777888888888877


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.++++|++++++|+.|.++.+++++|.|.+++ .|+|||+||++|..++|+.++||+||
T Consensus        94 g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~~~~vY~ATK  157 (246)
T COG4221          94 GDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYPGGAVYGATK  157 (246)
T ss_pred             CChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCCCCccchhhH
Confidence            78899999999999999999999999999999999987 79999999999999999999999998

>KOG1201|consensus

Probab=100.00  E-value=3.5e-34  Score=248.75  Aligned_cols=160  Identities=28%  Similarity=0.374  Sum_probs=139.7

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ++..+.+|++|+||||++|+|+++|.+|++.|+.+++++.+.+..++..++++..+    +++.+.||++|.+.+.++  
T Consensus        31 ~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g----~~~~y~cdis~~eei~~~--  104 (300)
T KOG1201|consen   31 KPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG----EAKAYTCDISDREEIYRL--  104 (300)
T ss_pred             cchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC----ceeEEEecCCCHHHHHHH--
Confidence            47788999999999999999999999999999999999999999888888877652    677778888887777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  .+++++..|.+|+||||||+
T Consensus       105 ------------------------------------------------------------a~~Vk~e~G~V~ILVNNAGI  124 (300)
T KOG1201|consen  105 ------------------------------------------------------------AKKVKKEVGDVDILVNNAGI  124 (300)
T ss_pred             ------------------------------------------------------------HHHHHHhcCCceEEEecccc
Confidence                                                                        55555555566666666666


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+++++++++++|+.|+|+++|+|+|.|.+.+ .||||+++|++|..+.++...||+||
T Consensus       125 ~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~gl~~YcaSK  190 (300)
T KOG1201|consen  125 VTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPAGLADYCASK  190 (300)
T ss_pred             ccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCccchhhhhhH
Confidence            6677888999999999999999999999999999999876 89999999999999999999999998

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=7.9e-34  Score=246.38  Aligned_cols=159  Identities=28%  Similarity=0.458  Sum_probs=144.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+++++++|||||+|||+++|++|+++|++|++++|++++++++++++....  +.++.++++|+++++++.++     
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~--~v~v~vi~~DLs~~~~~~~l-----   74 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT--GVEVEVIPADLSDPEALERL-----   74 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh--CceEEEEECcCCChhHHHHH-----
Confidence            45678999999999999999999999999999999999999999998887643  45677777777777777766     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               .+++.++.+++|+||||||+...
T Consensus        75 ---------------------------------------------------------~~~l~~~~~~IdvLVNNAG~g~~   97 (265)
T COG0300          75 ---------------------------------------------------------EDELKERGGPIDVLVNNAGFGTF   97 (265)
T ss_pred             ---------------------------------------------------------HHHHHhcCCcccEEEECCCcCCc
Confidence                                                                     77788888889999999999999


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++.+.+.++.++++++|+.++..+++.++|.|.+++ .|+||||+|.+|..|.|.++.|++||
T Consensus        98 g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p~~avY~ATK  160 (265)
T COG0300          98 GPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPYMAVYSATK  160 (265)
T ss_pred             cchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCcchHHHHHHH
Confidence            9999999999999999999999999999999999987 89999999999999999999999998

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=2.2e-29  Score=207.11  Aligned_cols=155  Identities=22%  Similarity=0.284  Sum_probs=135.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++.|-+++||||++|||+++|++|.+.|-.|++++|+++++++++++.       +.++...||+.|.++++.+++++++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~-------p~~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-------PEIHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC-------cchheeeecccchhhHHHHHHHHHh
Confidence            467899999999999999999999999999999999999998887754       5677899999999999999999999


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                      .|+.++++||||||...-.+.                                                           
T Consensus        75 ~~P~lNvliNNAGIqr~~dlt-----------------------------------------------------------   95 (245)
T COG3967          75 EYPNLNVLINNAGIQRNEDLT-----------------------------------------------------------   95 (245)
T ss_pred             hCCchheeeecccccchhhcc-----------------------------------------------------------
Confidence            999999999999865332111                                                           


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                       -.+-..++.++-+++|+.+|.++++.++|+|+++. .+.||++||..+..|....+.||++|
T Consensus        96 -~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafvPm~~~PvYcaTK  156 (245)
T COG3967          96 -GAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFVPMASTPVYCATK  156 (245)
T ss_pred             -CCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccCcccccccchhhH
Confidence             01234567788899999999999999999999886 79999999999999999999999998

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.2e-29  Score=217.52  Aligned_cols=158  Identities=18%  Similarity=0.252  Sum_probs=132.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+.++++.+++....  +.++.++.+|++|+++++++     
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~-----   76 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES--NVDVSYIVADLTKREDLERT-----   76 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEecCCCHHHHHHH-----
Confidence            45789999999999999999999999999999999999887777666654432  24577778888888777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++. ++|++|++|||||....
T Consensus        77 ---------------------------------------------------------~~~~~-~~g~iD~lv~nag~~~~   98 (263)
T PRK08339         77 ---------------------------------------------------------VKELK-NIGEPDIFFFSTGGPKP   98 (263)
T ss_pred             ---------------------------------------------------------HHHHH-hhCCCcEEEECCCCCCC
Confidence                                                                     55553 45677777777776656


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.++++|++.+++|+.++++++++++|.|++++ .|+||++||.++..+.|+++.|+++|
T Consensus        99 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~~~~~y~asK  161 (263)
T PRK08339         99 GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIPNIALSNVVR  161 (263)
T ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCCcchhhHHHH
Confidence            6778899999999999999999999999999998765 69999999999999999999999987

>PRK06484 short chain dehydrogenase; Validated

Probab=99.96  E-value=4.9e-28  Score=231.11  Aligned_cols=213  Identities=24%  Similarity=0.394  Sum_probs=172.2

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .+||+++||||++|||+++|++|+++|++|++++|+.+.++++.+++   +   .+..++++|++++++++++++.+.+.
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---G---PDHHALAMDVSDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C---CceeEEEeccCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999887766554433   2   46778999999999999999999999


Q ss_pred             hCCccEEEeCCCCCcc----------------------------------------c-cc--------------------
Q psy9256         124 FGCLDILINNAGRSQR----------------------------------------A-AW--------------------  142 (265)
Q Consensus       124 ~g~ldilinnAg~~~~----------------------------------------~-~~--------------------  142 (265)
                      +|++|++|||||+..+                                        + .+                    
T Consensus        77 ~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~a  156 (520)
T PRK06484         77 FGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSA  156 (520)
T ss_pred             hCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHH
Confidence            9999999999997311                                        0 00                    


Q ss_pred             -------------chh----------------hhHH----------HH-------------------H---hhhc-----
Q psy9256         143 -------------EDI----------------ELEV----------DR-------------------E---LFTY-----  156 (265)
Q Consensus       143 -------------~~~----------------~~~~----------~~-------------------~---~~~~-----  156 (265)
                                   .+.                ++..          ..                   .   +...     
T Consensus       157 sKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~  236 (520)
T PRK06484        157 SKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYI  236 (520)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence                         000                0000          00                   0   0000     


Q ss_pred             -----------------------cc----------------------------------------------------CCc
Q psy9256         157 -----------------------AY----------------------------------------------------RPS  161 (265)
Q Consensus       157 -----------------------~~----------------------------------------------------~~~  161 (265)
                                             ..                                                    ..+
T Consensus       237 ~G~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~  316 (520)
T PRK06484        237 TGSTLVVDGGWTVYGGSGPASTAQAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDE  316 (520)
T ss_pred             cCceEEecCCeeccccccCCCCccCCCCcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCc
Confidence                                   00                                                    003


Q ss_pred             eeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCC
Q psy9256         162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG  240 (265)
Q Consensus       162 v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~  240 (265)
                      +..+.+|++|+++++++++++.+++|++|++|||||... ..++.+.++++|++++++|+.++++++++++|.| + + +
T Consensus       317 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~-~-~  393 (520)
T PRK06484        317 HLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM-S-Q-G  393 (520)
T ss_pred             eeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh-c-c-C
Confidence            445788999999999999999999999999999999864 4678889999999999999999999999999999 2 2 5


Q ss_pred             ceEEEEcccccccCCCCCCccccCC
Q psy9256         241 GHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       241 g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |+||++||.++..+.|++++|++||
T Consensus       394 g~iv~isS~~~~~~~~~~~~Y~asK  418 (520)
T PRK06484        394 GVIVNLGSIASLLALPPRNAYCASK  418 (520)
T ss_pred             CEEEEECchhhcCCCCCCchhHHHH
Confidence            8999999999999999999999987

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.7e-28  Score=216.73  Aligned_cols=160  Identities=23%  Similarity=0.322  Sum_probs=134.3

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |..|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...   +.++.++++|++|++++.++    
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~---~~~~~~~~~Dv~d~~~v~~~----   73 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE---GFDVHGVMCDVRHREEVTHL----   73 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEeCCCCCHHHHHHH----
Confidence            45688999999999999999999999999999999999987777665555432   24566677777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||...
T Consensus        74 ----------------------------------------------------------~~~~~~~~g~id~li~nAg~~~   95 (275)
T PRK05876         74 ----------------------------------------------------------ADEAFRLLGHVDVVFSNAGIVV   95 (275)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCcCC
Confidence                                                                      6666666677777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+++.+.+.++|++.+++|+.|++++++.++|.|.+++.+|+||++||.++..+.|+.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (275)
T PRK05876         96 GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAK  160 (275)
T ss_pred             CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHH
Confidence            67788899999999999999999999999999998765468999999999999999999999987

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.96  E-value=2e-28  Score=213.08  Aligned_cols=157  Identities=25%  Similarity=0.348  Sum_probs=128.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.  .++..+.+.+.   +.++.++.+|++++++++++     
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~-----   73 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEAL---GRKFHFITADLIQQKDIDSI-----   73 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHc---CCeEEEEEeCCCCHHHHHHH-----
Confidence            467899999999999999999999999999999998853  23333333332   24566777777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.+|++|++|||||....
T Consensus        74 ---------------------------------------------------------~~~~~~~~g~iD~lv~~ag~~~~   96 (251)
T PRK12481         74 ---------------------------------------------------------VSQAVEVMGHIDILINNAGIIRR   96 (251)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCC
Confidence                                                                     66666666777777777776666


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.++++|++++++|+.++++++++++|.|++++.+|+||++||.++..+.++.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  160 (251)
T PRK12481         97 QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK  160 (251)
T ss_pred             CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence            6778889999999999999999999999999998765458999999999999999999999997

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=4.4e-28  Score=214.07  Aligned_cols=154  Identities=18%  Similarity=0.283  Sum_probs=118.9

Q ss_pred             ccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .|+||+++||||+  +|||+++|++|+++|++|++++|+.+..+.+.+...+.+   .+ .++++|++|+++++++++.+
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~---~~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG---SD-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC---Cc-eEEEecCCCHHHHHHHHHHH
Confidence            3579999999997  799999999999999999999998532223322222222   22 46778888888777775554


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                      .+                                                              ++|++|++|||||+..
T Consensus        78 ~~--------------------------------------------------------------~~g~iDilVnnAG~~~   95 (274)
T PRK08415         78 KK--------------------------------------------------------------DLGKIDFIVHSVAFAP   95 (274)
T ss_pred             HH--------------------------------------------------------------HcCCCCEEEECCccCc
Confidence            44                                                              4455555555555432


Q ss_pred             ----cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 ----RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                          ..++.+.+.++|++++++|+.+++++++.++|.|.+   +|+||++||.++..+.|+++.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~~~~~~~~~Y~asK  161 (274)
T PRK08415         96 KEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGVKYVPHYNVMGVAK  161 (274)
T ss_pred             ccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCccCCCcchhhhhHH
Confidence                246778899999999999999999999999999964   48999999999999999999999998

>KOG0725|consensus

Probab=99.96  E-value=6.8e-28  Score=212.19  Aligned_cols=163  Identities=31%  Similarity=0.415  Sum_probs=129.4

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ++..+.||+++|||+++|||+++|++|++.|++|++++|+++.+++....+......+.++..+.||++++++++++   
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l---   78 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKL---   78 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHH---
Confidence            45678999999999999999999999999999999999999999988888777665566777777888777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhh-cccccEEEecccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQ-FGCLDILINNAGR  198 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~-~g~ldilVnnAG~  198 (265)
                                                                                 ++...++ +|++|+||||||.
T Consensus        79 -----------------------------------------------------------~~~~~~~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   79 -----------------------------------------------------------VEFAVEKFFGKIDILVNNAGA   99 (270)
T ss_pred             -----------------------------------------------------------HHHHHHHhCCCCCEEEEcCCc
Confidence                                                                       4444444 4555555555555


Q ss_pred             cccc-cccccchHHHHhhhhhhhhH-HHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCC-CccccCC
Q psy9256         199 SQRA-AWEDIELEVDRELFELNVFS-VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS-GSYTDHL  265 (265)
Q Consensus       199 ~~~~-~~~~~~~~~~~~~~~~N~~~-~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~-~~Y~asK  265 (265)
                      .... ++.+.++++|+.++++|+.| .+.+.+.+.|++.+++ +|+|+++||.++..+.+.. ..|++||
T Consensus       100 ~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~~~~~~~~~~Y~~sK  168 (270)
T KOG0725|consen  100 LGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGVGPGPGSGVAYGVSK  168 (270)
T ss_pred             CCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccccCCCCCcccchhHH
Confidence            5433 68899999999999999996 5555555555555444 8999999999999886666 7999987

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.3e-28  Score=219.56  Aligned_cols=158  Identities=27%  Similarity=0.433  Sum_probs=136.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+.+|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+   .++.++.+|++|+++++++     
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g---~~~~~~~~Dv~d~~~v~~~-----   74 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALG---AEVLVVPTDVTDADQVKAL-----   74 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHH-----
Confidence            45789999999999999999999999999999999999888887777665543   4666777788877777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.+|++|++|||||....
T Consensus        75 ---------------------------------------------------------~~~~~~~~g~iD~lVnnAG~~~~   97 (330)
T PRK06139         75 ---------------------------------------------------------ATQAASFGGRIDVWVNNVGVGAV   97 (330)
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCCEEEECCCcCCC
Confidence                                                                     66666666777777777777767


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++.+.+.++|++++++|+.|++++++.++|+|.+++ .|+||++||.++..+.|+++.|++||
T Consensus        98 ~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p~~~~Y~asK  160 (330)
T PRK06139         98 GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQPYAAAYSASK  160 (330)
T ss_pred             CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCCCchhHHHHH
Confidence            7788899999999999999999999999999998775 69999999999999999999999998

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=5.5e-28  Score=213.06  Aligned_cols=153  Identities=22%  Similarity=0.282  Sum_probs=118.5

Q ss_pred             cCCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      |+||+++||||++  |||+++|++|+++|++|++++|+.+..+++.+...+.+    ...++++|++|+++++++++.+.
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g----~~~~~~~Dv~d~~~v~~~~~~~~   80 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG----SDFVLPCDVEDIASVDAVFEALE   80 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC----CceEEeCCCCCHHHHHHHHHHHH
Confidence            6799999999996  99999999999999999999987544333333222222    12456777777777777755555


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                      +++|++|+|||||                                                              |....
T Consensus        81 ~~~g~iD~lVnnA--------------------------------------------------------------G~~~~   98 (271)
T PRK06505         81 KKWGKLDFVVHAI--------------------------------------------------------------GFSDK   98 (271)
T ss_pred             HHhCCCCEEEECC--------------------------------------------------------------ccCCC
Confidence            5555555555555                                                              44321


Q ss_pred             ----ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 ----AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                          .++.+.+.++|++++++|+.++++++|+++|+|.+   +|+||++||.++..+.|++++|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y~asK  163 (271)
T PRK06505         99 NELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGSTRVMPNYNVMGVAK  163 (271)
T ss_pred             ccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCccccCCccchhhhhH
Confidence                45678899999999999999999999999999963   48999999999999999999999998

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1e-27  Score=209.70  Aligned_cols=161  Identities=24%  Similarity=0.288  Sum_probs=134.9

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +.+++||+++||||++|||++++++|+++|++|++++|++++++++.+++.+.. .+.++.++++|++|++++.++    
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~----   77 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF-PGARLLAARCDVLDEADVAAF----   77 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhC-CCceEEEEEecCCCHHHHHHH----
Confidence            356889999999999999999999999999999999999888877766655432 123566777777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.++++|++|||||...
T Consensus        78 ----------------------------------------------------------~~~~~~~~g~id~li~~Ag~~~   99 (265)
T PRK07062         78 ----------------------------------------------------------AAAVEARFGGVDMLVNNAGQGR   99 (265)
T ss_pred             ----------------------------------------------------------HHHHHHhcCCCCEEEECCCCCC
Confidence                                                                      6666666677777777777666


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||.++..+.|+...|+++|
T Consensus       100 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~y~asK  163 (265)
T PRK07062        100 VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEPHMVATSAAR  163 (265)
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCCCchHhHHHH
Confidence            66778888999999999999999999999999998765 69999999999999999999999887

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=9.1e-28  Score=209.90  Aligned_cols=157  Identities=18%  Similarity=0.175  Sum_probs=120.3

Q ss_pred             hccccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        40 ~~~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      ++.+++||+++||||+  +|||+++|++|+++|++|++++|+.+..+.+.+...+..    ...+++||++|++++++++
T Consensus         4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~   79 (258)
T PRK07533          4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD----APIFLPLDVREPGQLEAVF   79 (258)
T ss_pred             cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc----cceEEecCcCCHHHHHHHH
Confidence            3456789999999998  599999999999999999999998654333333222221    2446777888777777775


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                      +.+.+.+                                                              |++|++|||||
T Consensus        80 ~~~~~~~--------------------------------------------------------------g~ld~lv~nAg   97 (258)
T PRK07533         80 ARIAEEW--------------------------------------------------------------GRLDFLLHSIA   97 (258)
T ss_pred             HHHHHHc--------------------------------------------------------------CCCCEEEEcCc
Confidence            5554444                                                              44555555554


Q ss_pred             ccc----cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQ----RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...    .+++.+.+.++|++++++|+.+++++++.++|.|.+   +|+||++||.++..+.|+++.|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~~~~~~~~~Y~asK  166 (258)
T PRK07533         98 FAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAEKVVENYNLMGPVK  166 (258)
T ss_pred             cCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccccCCccchhhHHHH
Confidence            432    245678899999999999999999999999999952   48999999999998889999999987

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.95  E-value=9.1e-28  Score=213.17  Aligned_cols=158  Identities=27%  Similarity=0.361  Sum_probs=127.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC---------CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS---------SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYH  113 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (265)
                      .++||+++||||++|||.++|++|+++|++|++++|+.         +.++++.+++...   +.++.++.+|++|++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dv~~~~~v   79 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA---GGEAVANGDDIADWDGA   79 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc---CCceEEEeCCCCCHHHH
Confidence            47899999999999999999999999999999998875         4444444433322   23455566666666666


Q ss_pred             HHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEE
Q psy9256         114 RRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILI  193 (265)
Q Consensus       114 ~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilV  193 (265)
                      .++                                                              ++++.+++|++|++|
T Consensus        80 ~~~--------------------------------------------------------------~~~~~~~~g~id~lv   97 (286)
T PRK07791         80 ANL--------------------------------------------------------------VDAAVETFGGLDVLV   97 (286)
T ss_pred             HHH--------------------------------------------------------------HHHHHHhcCCCCEEE
Confidence            666                                                              677767777777777


Q ss_pred             ecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-----CceEEEEcccccccCCCCCCccccCC
Q psy9256         194 NNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ-----GGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       194 nnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-----~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ||||.....++.+.+.++|++++++|+.++++++++++|+|+++..     .|+||++||.++..+.++++.|++||
T Consensus        98 ~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  174 (286)
T PRK07791         98 NNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAK  174 (286)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCCchhhHHHH
Confidence            7777766667888999999999999999999999999999976421     37999999999999999999999987

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=2e-27  Score=207.81  Aligned_cols=157  Identities=18%  Similarity=0.214  Sum_probs=121.9

Q ss_pred             cccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +++.||+++||||+  +|||+++|++|+++|++|++++|+....+++.+...+..  +.++..+++|++|+++++++++.
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence            46789999999997  899999999999999999999886433333333333222  24677778888888888887555


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                      +.+.+|++|++||||                                                              |+.
T Consensus        81 ~~~~~g~ld~lv~na--------------------------------------------------------------g~~   98 (257)
T PRK08594         81 IKEEVGVIHGVAHCI--------------------------------------------------------------AFA   98 (257)
T ss_pred             HHHhCCCccEEEECc--------------------------------------------------------------ccC
Confidence            555555555555555                                                              443


Q ss_pred             c----cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 Q----RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .    ..++.+.+.++|++.+++|+.+++++++.++|+|.+   +|+||++||.++..+.|++++|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~Y~asK  165 (257)
T PRK08594         99 NKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLGGERVVQNYNVMGVAK  165 (257)
T ss_pred             CCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccCCccCCCCCchhHHHH
Confidence            2    245677889999999999999999999999999953   48999999999999999999999998

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-27  Score=208.09  Aligned_cols=160  Identities=25%  Similarity=0.261  Sum_probs=132.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+++.+++..+++.... .+.++.++++|++|++++.++     
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~-----   76 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV-AGARVLAVPADVTDAASVAAA-----   76 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEEccCCCHHHHHHH-----
Confidence            45789999999999999999999999999999999999887777766665421 134566777788777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.++++++|++|||||....
T Consensus        77 ---------------------------------------------------------~~~~~~~~g~id~li~~ag~~~~   99 (260)
T PRK07063         77 ---------------------------------------------------------VAAAEEAFGPLDVLVNNAGINVF   99 (260)
T ss_pred             ---------------------------------------------------------HHHHHHHhCCCcEEEECCCcCCC
Confidence                                                                     66666666667777777766555


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+..+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||.++..+.++..+|++||
T Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (260)
T PRK07063        100 ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIPGCFPYPVAK  162 (260)
T ss_pred             CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCCCCchHHHHHH
Confidence            5566788899999999999999999999999998765 68999999999999999999999987

>KOG1200|consensus

Probab=99.95  E-value=9.2e-28  Score=196.06  Aligned_cols=157  Identities=23%  Similarity=0.296  Sum_probs=129.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .++.|+++||||++|||++++..|+++|++|+..+++.+..+++...+..+    .....+.||++++++++..      
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~----~~h~aF~~DVS~a~~v~~~------   80 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY----GDHSAFSCDVSKAHDVQNT------   80 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC----CccceeeeccCcHHHHHHH------
Confidence            456789999999999999999999999999999999877666655544322    2333455555555555554      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              +++..+.+|++++||||||+....
T Consensus        81 --------------------------------------------------------l~e~~k~~g~psvlVncAGItrD~  104 (256)
T KOG1200|consen   81 --------------------------------------------------------LEEMEKSLGTPSVLVNCAGITRDG  104 (256)
T ss_pred             --------------------------------------------------------HHHHHHhcCCCcEEEEcCcccccc
Confidence                                                                    788888888888888888888888


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhh-hcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLA-REQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~-~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+..+..++|++++.+|+.|.|.++|++...|.. ++++++|||+||+.|.++..+++.|++||
T Consensus       105 ~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK  168 (256)
T KOG1200|consen  105 LLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASK  168 (256)
T ss_pred             ceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhc
Confidence            8999999999999999999999999999998533 33356999999999999999999999998

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2e-27  Score=206.53  Aligned_cols=158  Identities=34%  Similarity=0.439  Sum_probs=131.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++++|+++||||++|||.+++++|+++|++|++++|++++++++.+.+...+   .++.++.+|++++++++++     
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~-----   73 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEG---GEAVALAGDVRDEAYAKAL-----   73 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHH-----
Confidence            45789999999999999999999999999999999999887777766655432   4566777788877777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-  200 (265)
                                                                               ++++.++++++|++|||||... 
T Consensus        74 ---------------------------------------------------------~~~~~~~~~~id~li~~ag~~~~   96 (254)
T PRK07478         74 ---------------------------------------------------------VALAVERFGGLDIAFNNAGTLGE   96 (254)
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCCEEEECCCCCCC
Confidence                                                                     6666666667777777777643 


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-cCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-VGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-~~~~~~~~Y~asK  265 (265)
                      ..++.+.++++|++.+++|+.+++++++.++|.|++++ .|+||++||.++. .+.++++.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (254)
T PRK07478         97 MGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGFPGMAAYAASK  161 (254)
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccCCCCcchhHHHH
Confidence            35677888999999999999999999999999998765 6899999999887 5788899999997

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=1.5e-27  Score=208.89  Aligned_cols=160  Identities=19%  Similarity=0.234  Sum_probs=118.5

Q ss_pred             cccCCcEEEEcCC--CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGA--SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGa--s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..++||+++||||  ++|||+++|++|+++|++|++++|+.. .++..+++....   .....++||++|+++++++++.
T Consensus         2 ~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~   77 (261)
T PRK08690          2 GFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAEL---DSELVFRCDVASDDEINQVFAD   77 (261)
T ss_pred             CccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhcc---CCceEEECCCCCHHHHHHHHHH
Confidence            4578999999997  679999999999999999999887633 222222222211   2345677888888888888666


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                      +.+++|++|++|||||+.....                                                          
T Consensus        78 ~~~~~g~iD~lVnnAG~~~~~~----------------------------------------------------------   99 (261)
T PRK08690         78 LGKHWDGLDGLVHSIGFAPKEA----------------------------------------------------------   99 (261)
T ss_pred             HHHHhCCCcEEEECCccCCccc----------------------------------------------------------
Confidence            5555555555555555321100                                                          


Q ss_pred             cccc-ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAA-WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...+ +++.+.++|++++++|+.++++++++++|+|+++  +|+||++||.++..+.|++++|++||
T Consensus       100 ~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~~~~~~~~~Y~asK  164 (261)
T PRK08690        100 LSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAVRAIPNYNVMGMAK  164 (261)
T ss_pred             cccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEcccccccCCCCcccchhHH
Confidence            0012 3567788999999999999999999999999654  48999999999999999999999998

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.95  E-value=1.7e-27  Score=208.30  Aligned_cols=156  Identities=20%  Similarity=0.257  Sum_probs=120.1

Q ss_pred             cccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCC--cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          42 NYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSS--NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        42 ~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+..   .+..++++|++|+++++++ 
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~d~~~v~~~-   77 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL---NPSLFLPCDVQDDAQIEET-   77 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc---CcceEeecCcCCHHHHHHH-
Confidence            45789999999986  89999999999999999999887643  2233333332221   2455667777777777777 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.+++|++|++|||||
T Consensus        78 -------------------------------------------------------------~~~~~~~~g~iD~lv~nag   96 (258)
T PRK07370         78 -------------------------------------------------------------FETIKQKWGKLDILVHCLA   96 (258)
T ss_pred             -------------------------------------------------------------HHHHHHHcCCCCEEEEccc
Confidence                                                                         5555555555555555555


Q ss_pred             ccc----cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQ----RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...    ..++.+.+.++|++++++|+.++++++++++|.|.+   +|+||++||.++..+.|+++.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~Y~asK  165 (258)
T PRK07370         97 FAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVRAIPNYNVMGVAK  165 (258)
T ss_pred             ccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEeccccccCCcccchhhHHH
Confidence            432    246778899999999999999999999999999963   48999999999999999999999998

>KOG1610|consensus

Probab=99.95  E-value=4e-27  Score=205.65  Aligned_cols=163  Identities=26%  Similarity=0.325  Sum_probs=139.5

Q ss_pred             HhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHH
Q psy9256          36 KINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRR  115 (265)
Q Consensus        36 ~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (265)
                      ...-......+|.|+||||.+|.|+.+|++|.+.|++|+..+..++..+.+..+..     .+++..+++|+++++++++
T Consensus        19 ~~~~~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-----s~rl~t~~LDVT~~esi~~   93 (322)
T KOG1610|consen   19 LERQVLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-----SPRLRTLQLDVTKPESVKE   93 (322)
T ss_pred             HhhhcccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-----CCcceeEeeccCCHHHHHH
Confidence            33445577899999999999999999999999999999999987777776666554     3688889999999999998


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEec
Q psy9256         116 CFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       116 ~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn  195 (265)
                      +.+.+++..+.                                                            ..+..||||
T Consensus        94 a~~~V~~~l~~------------------------------------------------------------~gLwglVNN  113 (322)
T KOG1610|consen   94 AAQWVKKHLGE------------------------------------------------------------DGLWGLVNN  113 (322)
T ss_pred             HHHHHHHhccc------------------------------------------------------------ccceeEEec
Confidence            85554433221                                                            238899999


Q ss_pred             cccc-ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         196 AGRS-QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       196 AG~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ||+. ..++.+..+.+++++++++|++|+.+++++|+|++++++  |||||+||+.|..+.|..++|++||
T Consensus       114 AGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~~~p~~g~Y~~SK  182 (322)
T KOG1610|consen  114 AGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRVALPALGPYCVSK  182 (322)
T ss_pred             cccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCccCcccccchhhH
Confidence            9975 668899999999999999999999999999999998764  9999999999999999999999998

>KOG1014|consensus

Probab=99.95  E-value=1.1e-27  Score=208.97  Aligned_cols=154  Identities=24%  Similarity=0.357  Sum_probs=133.3

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|++++||||+.|||++.|++||++|.+|++++|+++++++++.++.+...  .++.++.+|.++.+.   .       
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~--vev~~i~~Dft~~~~---~-------  114 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK--VEVRIIAIDFTKGDE---V-------  114 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC--cEEEEEEEecCCCch---h-------
Confidence            3469999999999999999999999999999999999999999999988763  778889999888765   2       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc--ccccEEEecccccc-
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF--GCLDILINNAGRSQ-  200 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~--g~ldilVnnAG~~~-  200 (265)
                                                                             .+++.+..  ..+.+||||+|..+ 
T Consensus       115 -------------------------------------------------------ye~i~~~l~~~~VgILVNNvG~~~~  139 (312)
T KOG1014|consen  115 -------------------------------------------------------YEKLLEKLAGLDVGILVNNVGMSYD  139 (312)
T ss_pred             -------------------------------------------------------HHHHHHHhcCCceEEEEecccccCC
Confidence                                                                   22222222  35677888888765 


Q ss_pred             -cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 -RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 -~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                       +..+.+.+.+.+++.+.+|++++..+++.++|.|.+++ +|-|||++|.+|..|.|.++.|++||
T Consensus       140 ~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~p~~s~ysasK  204 (312)
T KOG1014|consen  140 YPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPTPLLSVYSASK  204 (312)
T ss_pred             CcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccChhHHHHHHHH
Confidence             56688888889999999999999999999999999876 89999999999999999999999997

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=2.2e-27  Score=206.75  Aligned_cols=152  Identities=12%  Similarity=0.186  Sum_probs=118.9

Q ss_pred             ccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++||+++||||+  +|||+++|++|+++|++|++++|+. +.++.   +.+..  ..++.++++|++|+++++++++.+
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~---~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKS---LQKLV--DEEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHH---HHhhc--cCceeEEeCCCCCHHHHHHHHHHH
Confidence            3689999999999  7999999999999999999999873 33222   22222  135667778888887777775554


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                      .+.                                                              +|++|++|||||...
T Consensus        78 ~~~--------------------------------------------------------------~g~iD~lv~nAg~~~   95 (252)
T PRK06079         78 KER--------------------------------------------------------------VGKIDGIVHAIAYAK   95 (252)
T ss_pred             HHH--------------------------------------------------------------hCCCCEEEEcccccc
Confidence            444                                                              445555555555432


Q ss_pred             ----cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 ----RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                          .+++.+.+.++|++.+++|+.++++++++++|+|.+   +|+||++||.++..+.|++++|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~~~~~~Y~asK  161 (252)
T PRK06079         96 KEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSERAIPNYNVMGIAK  161 (252)
T ss_pred             cccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCccccCCcchhhHHHH
Confidence                256778899999999999999999999999999953   48999999999999999999999998

>PRK08589 short chain dehydrogenase; Validated

Probab=99.95  E-value=3.5e-27  Score=207.67  Aligned_cols=156  Identities=22%  Similarity=0.384  Sum_probs=128.0

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..++||+++||||++|||+++|++|+++|++|++++|+ +.++++.+++.+.   +.++.++++|+++++++.++     
T Consensus         2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~-----   72 (272)
T PRK08589          2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN---GGKAKAYHVDISDEQQVKDF-----   72 (272)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc---CCeEEEEEeecCCHHHHHHH-----
Confidence            45789999999999999999999999999999999998 6666666555433   24677788888888888887     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-  200 (265)
                                                                               ++++.+++|++|++|||||... 
T Consensus        73 ---------------------------------------------------------~~~~~~~~g~id~li~~Ag~~~~   95 (272)
T PRK08589         73 ---------------------------------------------------------ASEIKEQFGRVDVLFNNAGVDNA   95 (272)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCcCEEEECCCCCCC
Confidence                                                                     5555555555666666666543 


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++++++|+.++++++++++|.|+++  +|+||++||.++..+.++.++|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  158 (272)
T PRK08589         96 AGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQAADLYRSGYNAAK  158 (272)
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhcCCCCCCchHHHHH
Confidence            3456678889999999999999999999999999865  38999999999999999999999987

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.5e-27  Score=211.43  Aligned_cols=159  Identities=22%  Similarity=0.286  Sum_probs=119.6

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC----------CcHHHHHHHHHHhCCCCCcEEEEeecCCCh
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS----------SNLERVKNLCVQAGAHPQSIYTLTLDVTQT  110 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~  110 (265)
                      |.+|+||+++||||++|||+++|++|+++|++|++++|+.          +.++++.+++...   +.++.++++|++|+
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dv~~~   79 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA---GGRGIAVQVDHLVP   79 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc---CCceEEEEcCCCCH
Confidence            3568899999999999999999999999999999999974          2344444444332   24566677777777


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccccc
Q psy9256         111 KYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  190 (265)
Q Consensus       111 ~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ld  190 (265)
                      ++++++++.+.+.                                                              +|++|
T Consensus        80 ~~v~~~~~~~~~~--------------------------------------------------------------~g~iD   97 (305)
T PRK08303         80 EQVRALVERIDRE--------------------------------------------------------------QGRLD   97 (305)
T ss_pred             HHHHHHHHHHHHH--------------------------------------------------------------cCCcc
Confidence            7777775554444                                                              44555


Q ss_pred             EEEecc-ccc----ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc---CCCCCCccc
Q psy9256         191 ILINNA-GRS----QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV---GAPYSGSYT  262 (265)
Q Consensus       191 ilVnnA-G~~----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~---~~~~~~~Y~  262 (265)
                      +||||| |..    ...++.+.+.++|++++++|+.++++++++++|+|.+++ +|+||++||.++..   +.++...|+
T Consensus        98 ilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~~~~~~~~~~~~Y~  176 (305)
T PRK08303         98 ILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAEYNATHYRLSVFYD  176 (305)
T ss_pred             EEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCccccccCcCCCCcchhH
Confidence            555554 421    124566788899999999999999999999999998765 69999999987654   334577899


Q ss_pred             cCC
Q psy9256         263 DHL  265 (265)
Q Consensus       263 asK  265 (265)
                      +||
T Consensus       177 asK  179 (305)
T PRK08303        177 LAK  179 (305)
T ss_pred             HHH
Confidence            987

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3e-27  Score=205.46  Aligned_cols=160  Identities=29%  Similarity=0.397  Sum_probs=130.3

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +.+++||+++||||++|||.+++++|+++|++|++++|+.+.++++.+++...+   .++..+.+|++|+++++++    
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~----   76 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG---GKVVPVCCDVSQHQQVTSM----   76 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHH----
Confidence            456789999999999999999999999999999999999887777766655432   4667778888888877777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.+|++|++|||||...
T Consensus        77 ----------------------------------------------------------~~~~~~~~g~id~lv~~ag~~~   98 (253)
T PRK05867         77 ----------------------------------------------------------LDQVTAELGGIDIAVCNAGIIT   98 (253)
T ss_pred             ----------------------------------------------------------HHHHHHHhCCCCEEEECCCCCC
Confidence                                                                      5556666666666777766665


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC-C-CCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA-P-YSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~-~-~~~~Y~asK  265 (265)
                      ..++.+.+.++|++++++|+.+++++++++.|.|.+++.+|+||++||.++..+. | ..+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asK  165 (253)
T PRK05867         99 VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASK  165 (253)
T ss_pred             CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHH
Confidence            5667788899999999999999999999999999876545899999999887543 3 457899987

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.95  E-value=2.2e-27  Score=193.25  Aligned_cols=149  Identities=36%  Similarity=0.521  Sum_probs=126.3

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecC--CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGA-KLVLSARS--SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |+++||||++|||++++++|+++|+ .|++++|+  .+..+++...+...   +.++.++++|++++++++++       
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~---~~~~~~~~~D~~~~~~~~~~-------   70 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP---GAKITFIECDLSDPESIRAL-------   70 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT---TSEEEEEESETTSHHHHHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc---cccccccccccccccccccc-------
Confidence            7899999999999999999999966 67888888  45555555544433   36777777777777777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.+.++++|++|||||....++
T Consensus        71 -------------------------------------------------------~~~~~~~~~~ld~li~~ag~~~~~~   95 (167)
T PF00106_consen   71 -------------------------------------------------------IEEVIKRFGPLDILINNAGIFSDGS   95 (167)
T ss_dssp             -------------------------------------------------------HHHHHHHHSSESEEEEECSCTTSBS
T ss_pred             -------------------------------------------------------ccccccccccccccccccccccccc
Confidence                                                                   7777777788888888888888888


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++++++|+.+++++.+.+.|    ++ +|+||++||+++..|.|+++.|++||
T Consensus        96 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~-~g~iv~~sS~~~~~~~~~~~~Y~ask  152 (167)
T PF00106_consen   96 LDDLSEEELERVFRVNLFGPFLLAKALLP----QG-GGKIVNISSIAGVRGSPGMSAYSASK  152 (167)
T ss_dssp             GGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HT-TEEEEEEEEGGGTSSSTTBHHHHHHH
T ss_pred             cccccchhhhhccccccceeeeeeehhee----cc-ccceEEecchhhccCCCCChhHHHHH
Confidence            99999999999999999999999999999    33 69999999999999999999999987

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=6.1e-27  Score=204.98  Aligned_cols=155  Identities=24%  Similarity=0.294  Sum_probs=118.9

Q ss_pred             cccCCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..++||+++||||++  |||+++|++|+++|++|++++|+. ..++..+++.+..   +...++++|++|+++++++++.
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~---g~~~~~~~Dv~~~~~v~~~~~~   79 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI---GCNFVSELDVTNPKSISNLFDD   79 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc---CCceEEEccCCCHHHHHHHHHH
Confidence            457899999999997  999999999999999999998873 3333333332221   1223567888888888877555


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                      +.+.+|++|+||||||                                                              ..
T Consensus        80 ~~~~~g~iDilVnnag--------------------------------------------------------------~~   97 (260)
T PRK06603         80 IKEKWGSFDFLLHGMA--------------------------------------------------------------FA   97 (260)
T ss_pred             HHHHcCCccEEEEccc--------------------------------------------------------------cC
Confidence            5555555555555554                                                              32


Q ss_pred             c----cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 Q----RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .    ..++.+.+.++|++++++|+.+++++++++.|+|.+   +|+||++||.++..+.|++++|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y~asK  164 (260)
T PRK06603         98 DKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAEKVIPNYNVMGVAK  164 (260)
T ss_pred             CcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCccccCCCcccchhhHH
Confidence            2    245678899999999999999999999999999953   48999999999999999999999998

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.95  E-value=2.5e-27  Score=211.92  Aligned_cols=176  Identities=16%  Similarity=0.164  Sum_probs=139.7

Q ss_pred             cccCCcEEEEcCC--CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhC-------CCC---CcEEEEeecC--
Q psy9256          42 NYFNNKVVWITGA--SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG-------AHP---QSIYTLTLDV--  107 (265)
Q Consensus        42 ~~l~gk~vlItGa--s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~---~~~~~~~~D~--  107 (265)
                      ++|+||+++||||  ++|||+++|++|+++|++|++ +|+.++++++...+....       ..+   .....+++|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4589999999999  899999999999999999998 888888888776654311       111   1246788998  


Q ss_pred             CChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc
Q psy9256         108 TQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG  187 (265)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g  187 (265)
                      ++++++..-+                                     .++.+     ..|  +++++++++++++.+++|
T Consensus        84 ~~~~~~~~~~-------------------------------------~~~~~-----~~~--~~~~~v~~l~~~i~~~~G  119 (303)
T PLN02730         84 DTPEDVPEDV-------------------------------------KTNKR-----YAG--SSNWTVQEVAESVKADFG  119 (303)
T ss_pred             CccccCchhh-------------------------------------hcccc-----ccc--CCHHHHHHHHHHHHHHcC
Confidence            5554322110                                     00011     122  788899999999999999


Q ss_pred             cccEEEecccccc--cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCC-CccccC
Q psy9256         188 CLDILINNAGRSQ--RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS-GSYTDH  264 (265)
Q Consensus       188 ~ldilVnnAG~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~-~~Y~as  264 (265)
                      ++|+||||||...  .+++.+.+.++|++++++|+.++++++|+++|+|.+   +|+||++||.++..+.|++ +.|++|
T Consensus       120 ~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~---~G~II~isS~a~~~~~p~~~~~Y~as  196 (303)
T PLN02730        120 SIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNP---GGASISLTYIASERIIPGYGGGMSSA  196 (303)
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechhhcCCCCCCchhhHHH
Confidence            9999999998643  378899999999999999999999999999999964   3899999999999988876 589998


Q ss_pred             C
Q psy9256         265 L  265 (265)
Q Consensus       265 K  265 (265)
                      |
T Consensus       197 K  197 (303)
T PLN02730        197 K  197 (303)
T ss_pred             H
Confidence            8

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.3e-27  Score=210.49  Aligned_cols=159  Identities=25%  Similarity=0.391  Sum_probs=132.2

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +++.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.    ...++..+.+|++|+++++++  
T Consensus         2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~----~~~~~~~~~~Dv~d~~~v~~~--   75 (296)
T PRK05872          2 PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELG----GDDRVLTVVADVTDLAAMQAA--   75 (296)
T ss_pred             CCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCCcEEEEEecCCCHHHHHHH--
Confidence            45667899999999999999999999999999999999998877666554432    123455566777777776666  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.++++++|++|||||.
T Consensus        76 ------------------------------------------------------------~~~~~~~~g~id~vI~nAG~   95 (296)
T PRK05872         76 ------------------------------------------------------------AEEAVERFGGIDVVVANAGI   95 (296)
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCc
Confidence                                                                        66666666777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.++++|++++++|+.|++++++.++|.|.++  +|+||++||.++..+.|+++.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  160 (296)
T PRK05872         96 ASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSLAAFAAAPGMAAYCASK  160 (296)
T ss_pred             CCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHhhcCCCCCchHHHHHH
Confidence            666778889999999999999999999999999999764  48999999999999999999999987

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.95  E-value=7.2e-27  Score=210.75  Aligned_cols=156  Identities=24%  Similarity=0.338  Sum_probs=123.6

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ..|++++||||++|||+++|++|+++|++|++++|++++++++.+++.+... +.++..+.+|+++  ++.+.       
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~-~~~~~~~~~Dl~~--~~~~~-------  120 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYS-KTQIKTVVVDFSG--DIDEG-------  120 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC-CcEEEEEEEECCC--CcHHH-------
Confidence            4699999999999999999999999999999999999888888777665331 2467778888874  22222       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc--cccEEEeccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG--CLDILINNAGRSQR  201 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g--~ldilVnnAG~~~~  201 (265)
                                                                             ++++.+..+  ++|++|||||....
T Consensus       121 -------------------------------------------------------~~~l~~~~~~~didilVnnAG~~~~  145 (320)
T PLN02780        121 -------------------------------------------------------VKRIKETIEGLDVGVLINNVGVSYP  145 (320)
T ss_pred             -------------------------------------------------------HHHHHHHhcCCCccEEEEecCcCCC
Confidence                                                                   222222222  35577777776532


Q ss_pred             --ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-C-CCCCCccccCC
Q psy9256         202 --AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-G-APYSGSYTDHL  265 (265)
Q Consensus       202 --~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-~-~~~~~~Y~asK  265 (265)
                        .++.+.+.+++++++++|+.|++++++.++|.|.+++ .|+||++||.++.. + .|+.++|++||
T Consensus       146 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~p~~~~Y~aSK  212 (320)
T PLN02780        146 YARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSDPLYAVYAATK  212 (320)
T ss_pred             CCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCccchHHHHHH
Confidence              4577889999999999999999999999999998776 79999999999975 3 58899999997

>PRK06398 aldose dehydrogenase; Validated

Probab=99.95  E-value=5.6e-27  Score=204.82  Aligned_cols=148  Identities=23%  Similarity=0.371  Sum_probs=126.0

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |.+++||+++||||++|||+++|++|+++|++|++++|+++..              .++.+++||++|+++++++    
T Consensus         1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~--------------~~~~~~~~D~~~~~~i~~~----   62 (258)
T PRK06398          1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY--------------NDVDYFKVDVSNKEQVIKG----   62 (258)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc--------------CceEEEEccCCCHHHHHHH----
Confidence            3468899999999999999999999999999999999876432              1466777888887777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||...
T Consensus        63 ----------------------------------------------------------~~~~~~~~~~id~li~~Ag~~~   84 (258)
T PRK06398         63 ----------------------------------------------------------IDYVISKYGRIDILVNNAGIES   84 (258)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666666667777777777665


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++++++|+.|+++++++++|+|.+++ .|+||++||.++..+.++++.|++||
T Consensus        85 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  148 (258)
T PRK06398         85 YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVTRNAAAYVTSK  148 (258)
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccCCCCCchhhhhH
Confidence            66788889999999999999999999999999998765 69999999999999999999999997

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=6.5e-27  Score=205.36  Aligned_cols=159  Identities=15%  Similarity=0.179  Sum_probs=118.2

Q ss_pred             ccCCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++||+++||||++  |||+++|++|+++|++|++++|+. +.++..+++...   .++..+++||++|+++++++++.+
T Consensus         3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~   78 (262)
T PRK07984          3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ---LGSDIVLPCDVAEDASIDAMFAEL   78 (262)
T ss_pred             ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhc---cCCceEeecCCCCHHHHHHHHHHH
Confidence            37899999999986  999999999999999999999873 333333333322   134556778888888888886665


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                      .+.+|++|++|||||+.....                                                         ..
T Consensus        79 ~~~~g~iD~linnAg~~~~~~---------------------------------------------------------~~  101 (262)
T PRK07984         79 GKVWPKFDGFVHSIGFAPGDQ---------------------------------------------------------LD  101 (262)
T ss_pred             HhhcCCCCEEEECCccCCccc---------------------------------------------------------cC
Confidence            555555555555555311000                                                         00


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++++++.+.|.|. +  +|+||++||.++..+.|++.+|++||
T Consensus       102 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~--~g~Iv~iss~~~~~~~~~~~~Y~asK  163 (262)
T PRK07984        102 GDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P--GSALLTLSYLGAERAIPNYNVMGLAK  163 (262)
T ss_pred             CcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C--CcEEEEEecCCCCCCCCCcchhHHHH
Confidence            01255678899999999999999999999998663 3  48999999999999999999999998

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.95  E-value=8.3e-27  Score=200.54  Aligned_cols=155  Identities=21%  Similarity=0.289  Sum_probs=125.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++..+.+|++++++++++      
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~---~~~~~~~~D~~~~~~~~~~------   72 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALT---DNVYSFQLKDFSQESIRHL------   72 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CCeEEEEccCCCHHHHHHH------
Confidence            4789999999999999999999999999999999999988888777665543   4566778888888888877      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc-cccEEEeccccc-c
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG-CLDILINNAGRS-Q  200 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g-~ldilVnnAG~~-~  200 (265)
                                                                              ++++.+++| ++|++|||||.. .
T Consensus        73 --------------------------------------------------------~~~~~~~~g~~iD~li~nag~~~~   96 (227)
T PRK08862         73 --------------------------------------------------------FDAIEQQFNRAPDVLVNNWTSSPL   96 (227)
T ss_pred             --------------------------------------------------------HHHHHHHhCCCCCEEEECCccCCC
Confidence                                                                    555555555 566666666533 3


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|.+.+++|+.+++.+++.++|+|.+++.+|+||++||..+.   ++++.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~asK  158 (227)
T PRK08862         97 PSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESSN  158 (227)
T ss_pred             CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHHH
Confidence            4567888899999999999999999999999999876446999999997653   5678899987

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.1e-27  Score=212.92  Aligned_cols=160  Identities=27%  Similarity=0.337  Sum_probs=136.1

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+..+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+   .++.++++|++|+++++++   
T Consensus         2 ~~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g---~~~~~v~~Dv~d~~~v~~~---   75 (334)
T PRK07109          2 MLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG---GEALAVVADVADAEAVQAA---   75 (334)
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC---CcEEEEEecCCCHHHHHHH---
Confidence            3456889999999999999999999999999999999999888777776665443   4666777777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++.+.+++|++|++|||||..
T Consensus        76 -----------------------------------------------------------~~~~~~~~g~iD~lInnAg~~   96 (334)
T PRK07109         76 -----------------------------------------------------------ADRAEEELGPIDTWVNNAMVT   96 (334)
T ss_pred             -----------------------------------------------------------HHHHHHHCCCCCEEEECCCcC
Confidence                                                                       666666667777777777766


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.++++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+.|.++.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asK  161 (334)
T PRK07109         97 VFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIPLQSAYCAAK  161 (334)
T ss_pred             CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCCcchHHHHHH
Confidence            667778899999999999999999999999999998765 69999999999999999999999987

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=7.9e-27  Score=205.79  Aligned_cols=154  Identities=18%  Similarity=0.245  Sum_probs=118.0

Q ss_pred             ccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .|.||+++||||+  +|||+++|++|+++|++|++++|++...+++.+...+.+    ....+++|++|+++++++    
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~----~~~~~~~Dl~~~~~v~~~----   78 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG----AFVAGHCDVTDEASIDAV----   78 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC----CceEEecCCCCHHHHHHH----
Confidence            4678999999997  899999999999999999999886432333332222221    244577777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||+..
T Consensus        79 ----------------------------------------------------------~~~~~~~~g~iD~lv~nAG~~~  100 (272)
T PRK08159         79 ----------------------------------------------------------FETLEKKWGKLDFVVHAIGFSD  100 (272)
T ss_pred             ----------------------------------------------------------HHHHHHhcCCCcEEEECCcccC
Confidence                                                                      4444445555555555555432


Q ss_pred             ----cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 ----RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                          ..++.+.+.++|++.+++|+.++++++++++|+|.+   +|+||++||.++..+.|+++.|++||
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~p~~~~Y~asK  166 (272)
T PRK08159        101 KDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAEKVMPHYNVMGVAK  166 (272)
T ss_pred             ccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEeccccccCCCcchhhhhHH
Confidence                245678899999999999999999999999999953   48999999999998999999999998

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.94  E-value=1.4e-26  Score=202.30  Aligned_cols=166  Identities=17%  Similarity=0.223  Sum_probs=128.0

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +.+|+||+++||||++|||+++|++|+++|++|++++|+ ++.+++..+.+...  .+.++.++++|++|+++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~   80 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK--YGIKAKAYPLNILEPETYKELFKK   80 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh--cCCceEEEEcCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999998764 44444444444322  135677888888888888888666


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                      +.+.+|++|++|||||+.....                                                        ..
T Consensus        81 ~~~~~g~id~lv~nAg~~~~~~--------------------------------------------------------~~  104 (260)
T PRK08416         81 IDEDFDRVDFFISNAIISGRAV--------------------------------------------------------VG  104 (260)
T ss_pred             HHHhcCCccEEEECcccccccc--------------------------------------------------------cc
Confidence            6665566666666665321100                                                        00


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.++++|++.+++|+.+++.+++.++|.|.+++ .|+||++||.++..+.|++.+|++||
T Consensus       105 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  169 (260)
T PRK08416        105 GYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVYIENYAGHGTSK  169 (260)
T ss_pred             ccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccCCCCcccchhhH
Confidence            123566778899999999999999999999999998765 68999999999999999999999998

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.5e-26  Score=201.37  Aligned_cols=160  Identities=24%  Similarity=0.359  Sum_probs=128.8

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ++++++||+++||||++|||.++|++|+++|++|++++|+.+ .+++..+.+...   +.++..+++|++|++++.++  
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~i~~~--   76 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA---GRRAIQIAADVTSKADLRAA--   76 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHH--
Confidence            356789999999999999999999999999999999999764 344444444332   24566677777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.++++++|++|||||.
T Consensus        77 ------------------------------------------------------------~~~~~~~~g~id~li~~ag~   96 (254)
T PRK06114         77 ------------------------------------------------------------VARTEAELGALTLAVNAAGI   96 (254)
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCC
Confidence                                                                        66666666667777777776


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCC--CCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY--SGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~--~~~Y~asK  265 (265)
                      ....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||.++..+.++  .+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~sK  164 (254)
T PRK06114         97 ANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRGLLQAHYNASK  164 (254)
T ss_pred             CCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCCcchHHHHH
Confidence            6556677888999999999999999999999999998765 689999999999876654  68899887

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=9.5e-27  Score=203.86  Aligned_cols=155  Identities=19%  Similarity=0.243  Sum_probs=114.3

Q ss_pred             cccCCcEEEEcCC--CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGA--SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGa--s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..+++|+++||||  ++|||+++|++|+++|++|++++|.....+++.+...+.+    ...++++|++|+++++++++.
T Consensus         2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~   77 (260)
T PRK06997          2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG----SDLVFPCDVASDEQIDALFAS   77 (260)
T ss_pred             CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC----CcceeeccCCCHHHHHHHHHH
Confidence            3478999999996  6799999999999999999998765322222222222221    223567777777777777555


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                      +.+++|++|++|||||                                                              ..
T Consensus        78 ~~~~~g~iD~lvnnAG--------------------------------------------------------------~~   95 (260)
T PRK06997         78 LGQHWDGLDGLVHSIG--------------------------------------------------------------FA   95 (260)
T ss_pred             HHHHhCCCcEEEEccc--------------------------------------------------------------cC
Confidence            5555555555555554                                                              43


Q ss_pred             cc----cc-ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QR----AA-WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~----~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..    .+ +++.+.++|++.+++|+.++++++++++|+|. +  +|+||++||.++..+.|++++|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~-~--~g~Ii~iss~~~~~~~~~~~~Y~asK  163 (260)
T PRK06997         96 PREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS-D--DASLLTLSYLGAERVVPNYNTMGLAK  163 (260)
T ss_pred             CccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC-C--CceEEEEeccccccCCCCcchHHHHH
Confidence            21    12 35678899999999999999999999999994 2  48999999999999999999999998

>PRK05599 hypothetical protein; Provisional

Probab=99.94  E-value=1.7e-26  Score=200.58  Aligned_cols=154  Identities=19%  Similarity=0.216  Sum_probs=124.0

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||+++|++|+ +|++|++++|++++++++.+++.+.+  +.++.+++||++|+++++++          
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~d~~~v~~~----------   67 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG--ATSVHVLSFDAQDLDTHREL----------   67 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc--CCceEEEEcccCCHHHHHHH----------
Confidence            579999999999999999999 59999999999888888777765543  23466778888888887777          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++++.+.+|++|++|||||.....+..+
T Consensus        68 ----------------------------------------------------~~~~~~~~g~id~lv~nag~~~~~~~~~   95 (246)
T PRK05599         68 ----------------------------------------------------VKQTQELAGEISLAVVAFGILGDQERAE   95 (246)
T ss_pred             ----------------------------------------------------HHHHHHhcCCCCEEEEecCcCCCchhhh
Confidence                                                                5555555555666666666544444555


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.+++++++++|+.+++++++.++|.|.+++.+|+||++||.++..+.|+++.|++||
T Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  154 (246)
T PRK05599         96 TDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTK  154 (246)
T ss_pred             cCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHH
Confidence            66778889999999999999999999998764369999999999999999999999998

>PRK06194 hypothetical protein; Provisional

Probab=99.94  E-value=2.5e-26  Score=203.13  Aligned_cols=160  Identities=29%  Similarity=0.377  Sum_probs=133.1

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |.++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...   +.++.++.+|++|+++++++    
T Consensus         1 m~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~----   73 (287)
T PRK06194          1 MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ---GAEVLGVRTDVSDAAQVEAL----   73 (287)
T ss_pred             CcCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHH----
Confidence            35678899999999999999999999999999999999877776665554432   24566777777777777776    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++.+.++++++|++|||||...
T Consensus        74 ----------------------------------------------------------~~~~~~~~g~id~vi~~Ag~~~   95 (287)
T PRK06194         74 ----------------------------------------------------------ADAALERFGAVHLLFNNAGVGA   95 (287)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666666677777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCC-----ceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG-----GHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~-----g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+++.+.+.++|++.+++|+.|++++++.++|.|+++..+     |+||++||.++..+.++.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  165 (287)
T PRK06194         96 GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSK  165 (287)
T ss_pred             CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHH
Confidence            6777788899999999999999999999999999876532     7999999999999989999999987

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.94  E-value=2.8e-26  Score=199.59  Aligned_cols=158  Identities=25%  Similarity=0.365  Sum_probs=127.1

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      -.+++||+++||||++|||.++|++|+++|++|++++++..  ++..+.+...   +.++..+++|++|+++++++    
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~----   75 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL---GRRFLSLTADLRKIDGIPAL----   75 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc---CCeEEEEECCCCCHHHHHHH----
Confidence            34688999999999999999999999999999998876532  3333333322   23566677777777777766    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||...
T Consensus        76 ----------------------------------------------------------~~~~~~~~~~~D~li~~Ag~~~   97 (253)
T PRK08993         76 ----------------------------------------------------------LERAVAEFGHIDILVNNAGLIR   97 (253)
T ss_pred             ----------------------------------------------------------HHHHHHHhCCCCEEEECCCCCC
Confidence                                                                      6666666677777777777665


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.++++|++.+++|+.+++++++++.|.|.+++.+|+||++||.++..+.++.+.|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (253)
T PRK08993         98 REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASK  162 (253)
T ss_pred             CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHH
Confidence            56677888999999999999999999999999998765468999999999999989999999987

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.94  E-value=2.8e-26  Score=199.31  Aligned_cols=159  Identities=22%  Similarity=0.342  Sum_probs=132.9

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ++.+.+|+++||||++|||.+++++|+++|++|++++|+++.+++..+++...   +.+...+++|++|++++.++    
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~----   76 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE---GIKAHAAPFNVTHKQEVEAA----   76 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc---CCeEEEEecCCCCHHHHHHH----
Confidence            45678999999999999999999999999999999999987777666555433   23566667777777776666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||...
T Consensus        77 ----------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~   98 (254)
T PRK08085         77 ----------------------------------------------------------IEHIEKDIGPIDVLINNAGIQR   98 (254)
T ss_pred             ----------------------------------------------------------HHHHHHhcCCCCEEEECCCcCC
Confidence                                                                      6666666777777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++++++.+.|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         99 RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccCCCCCcchHHHH
Confidence            66778889999999999999999999999999997665 69999999999999989999999987

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-26  Score=208.92  Aligned_cols=163  Identities=21%  Similarity=0.189  Sum_probs=126.8

Q ss_pred             hhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          37 INKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        37 ~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      +..++.+++||+++||||++|||+++|++|+++|++|++++|+.++.+++.+++.+.. .+.++.++++|++|.++++++
T Consensus         5 ~~~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~-~~~~v~~~~~Dl~d~~sv~~~   83 (313)
T PRK05854          5 LDITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAV-PDAKLSLRALDLSSLASVAAL   83 (313)
T ss_pred             ccccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-CCCceEEEEecCCCHHHHHHH
Confidence            3445678999999999999999999999999999999999999888887777665432 124577788888888888888


Q ss_pred             HHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecc
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA  196 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnA  196 (265)
                                                                                    ++++.+.++++|+|||||
T Consensus        84 --------------------------------------------------------------~~~~~~~~~~iD~li~nA  101 (313)
T PRK05854         84 --------------------------------------------------------------GEQLRAEGRPIHLLINNA  101 (313)
T ss_pred             --------------------------------------------------------------HHHHHHhCCCccEEEECC
Confidence                                                                          444444455555555555


Q ss_pred             cccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC------------CCCCCccccC
Q psy9256         197 GRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG------------APYSGSYTDH  264 (265)
Q Consensus       197 G~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~------------~~~~~~Y~as  264 (265)
                      |.... +..+.+.++|+..+++|+.|++++++.++|.|.++  .|+||++||.++..+            ++++..|+.|
T Consensus       102 G~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~S  178 (313)
T PRK05854        102 GVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQS  178 (313)
T ss_pred             ccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcccccccccCcchhhhHHH
Confidence            54332 23356778999999999999999999999999764  589999999987654            2456689888


Q ss_pred             C
Q psy9256         265 L  265 (265)
Q Consensus       265 K  265 (265)
                      |
T Consensus       179 K  179 (313)
T PRK05854        179 K  179 (313)
T ss_pred             H
Confidence            7

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.3e-26  Score=200.13  Aligned_cols=154  Identities=23%  Similarity=0.239  Sum_probs=123.5

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |.++++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++      +.++.++++|++|++++.++    
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~----   70 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL------GERARFIATDITDDAAIERA----   70 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeeEEEEecCCCHHHHHHH----
Confidence            45678999999999999999999999999999999999877666554432      24577788888888888888    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++.+.+.++++|++|||||...
T Consensus        71 ----------------------------------------------------------~~~~~~~~g~id~lv~~ag~~~   92 (261)
T PRK08265         71 ----------------------------------------------------------VATVVARFGRVDILVNLACTYL   92 (261)
T ss_pred             ----------------------------------------------------------HHHHHHHhCCCCEEEECCCCCC
Confidence                                                                      4444444555555555555433


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..+ .+.+.++|++.+++|+.+++++++++.|.|. ++ .|+||++||.++..+.++.+.|++||
T Consensus        93 ~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-~g~ii~isS~~~~~~~~~~~~Y~asK  154 (261)
T PRK08265         93 DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG-GGAIVNFTSISAKFAQTGRWLYPASK  154 (261)
T ss_pred             CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC-CcEEEEECchhhccCCCCCchhHHHH
Confidence            222 2467889999999999999999999999997 43 69999999999999999999999987

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.94  E-value=3.6e-26  Score=199.23  Aligned_cols=160  Identities=24%  Similarity=0.453  Sum_probs=133.9

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ++..+++||+++||||++|||.+++++|+++|++|++++|+ +..+++.+.+.+.+   .++.++++|+++++++.++  
T Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~--   81 (258)
T PRK06935          8 MDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEG---RKVTFVQVDLTKPESAEKV--   81 (258)
T ss_pred             cccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHH--
Confidence            55567899999999999999999999999999999999998 55555555544332   4566777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|++|||||.
T Consensus        82 ------------------------------------------------------------~~~~~~~~g~id~li~~ag~  101 (258)
T PRK06935         82 ------------------------------------------------------------VKEALEEFGKIDILVNNAGT  101 (258)
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCC
Confidence                                                                        67777777777888888877


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||.++..+.++++.|++||
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  167 (258)
T PRK06935        102 IRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGKFVPAYTASK  167 (258)
T ss_pred             CCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCCCchhhHHHH
Confidence            6666777888899999999999999999999999998765 68999999999999999999999987

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.9e-26  Score=201.42  Aligned_cols=153  Identities=29%  Similarity=0.392  Sum_probs=128.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|+|++++||||++|||.+++++|+++|++|++++|+++.+++..+.+.       ++.++.+|++|++++.++      
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~------   68 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-------LVVGGPLDVTDPASFAAF------   68 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-------cceEEEccCCCHHHHHHH------
Confidence            4678999999999999999999999999999999998776655444321       355667777777777666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++.+.+.++++|++|||||.....
T Consensus        69 --------------------------------------------------------~~~~~~~~~~id~li~~ag~~~~~   92 (273)
T PRK07825         69 --------------------------------------------------------LDAVEADLGPIDVLVNNAGVMPVG   92 (273)
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCCC
Confidence                                                                    666666667777777777776667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|++++++.++|.|.+++ .|+||++||.++..+.|+++.|++||
T Consensus        93 ~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  154 (273)
T PRK07825         93 PFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVPGMATYCASK  154 (273)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCCCCcchHHHH
Confidence            777888999999999999999999999999998776 79999999999999999999999987

>KOG4169|consensus

Probab=99.94  E-value=1.5e-26  Score=193.18  Aligned_cols=152  Identities=27%  Similarity=0.351  Sum_probs=128.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++++||++++||+.+|||++++++|+++|..+..+..+.|..+.-. +++                              
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~------------------------------   49 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQ------------------------------   49 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHh------------------------------
Confidence            3578999999999999999999999999999888887777643322 222                              


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                       .+++..++.+++||+++..+++++++++.+++|++|++||+||++. 
T Consensus        50 ---------------------------------ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~-   95 (261)
T KOG4169|consen   50 ---------------------------------AINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILD-   95 (261)
T ss_pred             ---------------------------------ccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEccccccc-
Confidence                                             2334456666666666666677779999999999999999999853 


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc--CCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE--QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~--~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                             +.+|++.+++|+.|....++..+|+|.+++  .+|-|||+||++|..|.|..++|+|||
T Consensus        96 -------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsK  154 (261)
T KOG4169|consen   96 -------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASK  154 (261)
T ss_pred             -------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcc
Confidence                   567999999999999999999999998876  468999999999999999999999998

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.9e-26  Score=197.74  Aligned_cols=155  Identities=24%  Similarity=0.336  Sum_probs=128.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      ||+++||||++|||.+++++|+++|++|++++|+.+.++++.+.+.+.+   .++.++++|++|+++++++         
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~---------   68 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFP---GQVLTVQMDVRNPEDVQKM---------   68 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHH---------
Confidence            6899999999999999999999999999999999877766665554332   4677777888887777777         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.++++++|++|||||.....++.
T Consensus        69 -----------------------------------------------------~~~~~~~~~~id~lI~~ag~~~~~~~~   95 (252)
T PRK07677         69 -----------------------------------------------------VEQIDEKFGRIDALINNAAGNFICPAE   95 (252)
T ss_pred             -----------------------------------------------------HHHHHHHhCCccEEEECCCCCCCCCcc
Confidence                                                                 666666666677777777655455677


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++.+++|+.+++.++++++|.|.+++..|+||++||.++..+.++...|++||
T Consensus        96 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  155 (252)
T PRK07677         96 DLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK  155 (252)
T ss_pred             cCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHH
Confidence            889999999999999999999999999997654469999999999998888999999987

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.94  E-value=5.9e-26  Score=198.76  Aligned_cols=161  Identities=22%  Similarity=0.309  Sum_probs=136.3

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ++.+++.+|+++||||++|||.+++++|+++|++|++.+|+++++++..+.+...   +.++.++++|+++++++.++  
T Consensus         3 ~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~--   77 (265)
T PRK07097          3 ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL---GIEAHGYVCDVTDEDGVQAM--   77 (265)
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHH--
Confidence            4566789999999999999999999999999999999999887777666555433   24567777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.++++++|++|||||.
T Consensus        78 ------------------------------------------------------------~~~~~~~~~~id~li~~ag~   97 (265)
T PRK07097         78 ------------------------------------------------------------VSQIEKEVGVIDILVNNAGI   97 (265)
T ss_pred             ------------------------------------------------------------HHHHHHhCCCCCEEEECCCC
Confidence                                                                        66666667777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++++++|+.+++.+++.++|.|.+++ .|+||++||.++..+.+++..|+++|
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (265)
T PRK07097         98 IKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGRETVSAYAAAK  163 (265)
T ss_pred             CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCCCCCccHHHHH
Confidence            7667778889999999999999999999999999998765 79999999999999889999999987

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.94  E-value=7e-26  Score=196.96  Aligned_cols=162  Identities=28%  Similarity=0.398  Sum_probs=135.0

Q ss_pred             hhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          38 NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        38 ~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      .+.+.+++||+++||||++|||++++++|+++|++|++.+|+++..++..+.+...   +.++..+++|++|+++++.+ 
T Consensus         2 ~~~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~---~~~~~~~~~D~~~~~~~~~~-   77 (255)
T PRK07523          2 SLNLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ---GLSAHALAFDVTDHDAVRAA-   77 (255)
T ss_pred             CccccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CceEEEEEccCCCHHHHHHH-
Confidence            34556789999999999999999999999999999999999887766655555432   24566777777777777777 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++.+.++++++|++|||||
T Consensus        78 -------------------------------------------------------------~~~~~~~~~~~d~li~~ag   96 (255)
T PRK07523         78 -------------------------------------------------------------IDAFEAEIGPIDILVNNAG   96 (255)
T ss_pred             -------------------------------------------------------------HHHHHHhcCCCCEEEECCC
Confidence                                                                         6666666677777777777


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .....++.+.+.++|++++++|+.+++++++.+.|.|.+++ .|+||++||..+..+.++++.|+++|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~~sK  163 (255)
T PRK07523         97 MQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALARPGIAPYTATK  163 (255)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccCCCCCccHHHHH
Confidence            76667788889999999999999999999999999998765 69999999999999999999999987

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=7.1e-26  Score=197.53  Aligned_cols=159  Identities=23%  Similarity=0.308  Sum_probs=123.1

Q ss_pred             ccccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCC-----------cHHHHHHHHHHhCCCCCcEEEEeecC
Q psy9256          41 LNYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSS-----------NLERVKNLCVQAGAHPQSIYTLTLDV  107 (265)
Q Consensus        41 ~~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~D~  107 (265)
                      |..++||+++||||+  +|||.++|++|+++|++|++++|+..           ..++..+.+..   .+.++.++++|+
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~D~   77 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK---NGVKVSSMELDL   77 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh---cCCeEEEEEcCC
Confidence            356889999999999  49999999999999999999865321           11111111111   123444445555


Q ss_pred             CChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc
Q psy9256         108 TQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG  187 (265)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g  187 (265)
                      ++++                                                              +++++++++.+.+|
T Consensus        78 ~~~~--------------------------------------------------------------~i~~~~~~~~~~~g   95 (256)
T PRK12859         78 TQND--------------------------------------------------------------APKELLNKVTEQLG   95 (256)
T ss_pred             CCHH--------------------------------------------------------------HHHHHHHHHHHHcC
Confidence            5554                                                              44555777777777


Q ss_pred             cccEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         188 CLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       188 ~ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++|++|||||.....++.+.++++|++.+++|+.++++++++++|.|.+++ .|+||++||.++..+.+++.+|++||
T Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (256)
T PRK12859         96 YPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQGPMVGELAYAATK  172 (256)
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCCCCCCchHHHHHH
Confidence            888888888876667788899999999999999999999999999998765 69999999999999999999999987

>PLN02253 xanthoxin dehydrogenase

Probab=99.94  E-value=1.2e-25  Score=198.21  Aligned_cols=159  Identities=26%  Similarity=0.370  Sum_probs=126.7

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +...+.||+++||||++|||.+++++|+++|++|++++|+++..++..+.+   . ...++.++++|++|+++++++   
T Consensus        12 ~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~---   84 (280)
T PLN02253         12 PSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL---G-GEPNVCFFHCDVTVEDDVSRA---   84 (280)
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---c-CCCceEEEEeecCCHHHHHHH---
Confidence            445678999999999999999999999999999999999876555544433   1 134677788888888887777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++.+.+++|++|++|||||..
T Consensus        85 -----------------------------------------------------------~~~~~~~~g~id~li~~Ag~~  105 (280)
T PLN02253         85 -----------------------------------------------------------VDFTVDKFGTLDIMVNNAGLT  105 (280)
T ss_pred             -----------------------------------------------------------HHHHHHHhCCCCEEEECCCcC
Confidence                                                                       444555555555555555543


Q ss_pred             cc--ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QR--AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..  .++.+.+.++|++++++|+.|++++++++.|.|.+++ .|+||+++|.++..+.++..+|++||
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~Y~~sK  172 (280)
T PLN02253        106 GPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIGGLGPHAYTGSK  172 (280)
T ss_pred             CCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhcccCCCCcccHHHH
Confidence            22  3467788999999999999999999999999998654 69999999999999888889999987

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.9e-25  Score=196.80  Aligned_cols=158  Identities=23%  Similarity=0.291  Sum_probs=125.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-------HHHHHHHHHHhCCCCCcEEEEeecCCChHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-------LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHR  114 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (265)
                      .++++|+++||||++|||.++|++|+++|++|++++|+.+.       +++..+++...   +.++.++.+|+++++++.
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~D~~~~~~i~   78 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA---GGQALPLVGDVRDEDQVA   78 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc---CCceEEEEecCCCHHHHH
Confidence            35788999999999999999999999999999999997653       22233333222   345666667777776666


Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEe
Q psy9256         115 RCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILIN  194 (265)
Q Consensus       115 ~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVn  194 (265)
                      ++                                                              ++++.++++++|++||
T Consensus        79 ~~--------------------------------------------------------------~~~~~~~~g~id~li~   96 (273)
T PRK08278         79 AA--------------------------------------------------------------VAKAVERFGGIDICVN   96 (273)
T ss_pred             HH--------------------------------------------------------------HHHHHHHhCCCCEEEE
Confidence            66                                                              6666666667777777


Q ss_pred             cccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC--CCCCccccCC
Q psy9256         195 NAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA--PYSGSYTDHL  265 (265)
Q Consensus       195 nAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~--~~~~~Y~asK  265 (265)
                      |||.....+..+.+.++|++++++|+.+++.++++++|.|.+++ +|+|+++||..+..+.  +++++|++||
T Consensus        97 ~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~~~Y~~sK  168 (273)
T PRK08278         97 NASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLDPKWFAPHTAYTMAK  168 (273)
T ss_pred             CCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhccccccCCcchhHHHH
Confidence            77766666777888999999999999999999999999998765 6899999999888776  8889999998

>KOG1208|consensus

Probab=99.93  E-value=7.7e-26  Score=202.43  Aligned_cols=147  Identities=29%  Similarity=0.331  Sum_probs=123.1

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ....++.|++++|||+++|||.++|+.|+.+|++|++.+|+.++.+++++.+.. +....++.+++||++|.+++.++.+
T Consensus        28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~  106 (314)
T KOG1208|consen   28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAE  106 (314)
T ss_pred             eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHH
Confidence            344678999999999999999999999999999999999999999999888887 4446788899999999999999966


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                      .+++..+++|+||||||                                                              +
T Consensus       107 ~~~~~~~~ldvLInNAG--------------------------------------------------------------V  124 (314)
T KOG1208|consen  107 EFKKKEGPLDVLINNAG--------------------------------------------------------------V  124 (314)
T ss_pred             HHHhcCCCccEEEeCcc--------------------------------------------------------------c
Confidence            66655555555555555                                                              4


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      ..+..  ..+.|.+|..|.||++|+|.+++.++|.|+++. ++|||++||..+
T Consensus       125 ~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~  174 (314)
T KOG1208|consen  125 MAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILG  174 (314)
T ss_pred             ccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccc
Confidence            32222  456678999999999999999999999998876 499999999887

>PRK09242 tropinone reductase; Provisional

Probab=99.93  E-value=2.1e-25  Score=194.21  Aligned_cols=161  Identities=28%  Similarity=0.366  Sum_probs=132.8

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ++.+.||+++||||++|||.+++++|+++|++|++++|+.+.+++..+.+.... .+.++.++.+|+++++++.++    
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~----   78 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEF-PEREVHGLAADVSDDEDRRAI----   78 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHH----
Confidence            456789999999999999999999999999999999998877776665554432 134667777777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.++++|++|||||...
T Consensus        79 ----------------------------------------------------------~~~~~~~~g~id~li~~ag~~~  100 (257)
T PRK09242         79 ----------------------------------------------------------LDWVEDHWDGLHILVNNAGGNI  100 (257)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      5666666666666777776655


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       101 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK  164 (257)
T PRK09242        101 RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVRSGAPYGMTK  164 (257)
T ss_pred             CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCCCCcchHHHH
Confidence            56677888999999999999999999999999998765 68999999999999999999999987

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.93  E-value=1.9e-25  Score=196.76  Aligned_cols=173  Identities=24%  Similarity=0.335  Sum_probs=140.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++...   +.++.++++|+++++++.++++.+.
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA---GGEALAVKADVLDKESLEQARQQIL   82 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999887777666665543   3568889999999999999988888


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                      +.+|++|++|||||+..+....  +.+.                                       .+ +     ....
T Consensus        83 ~~~g~id~li~~ag~~~~~~~~--~~~~---------------------------------------~~-~-----~~~~  115 (278)
T PRK08277         83 EDFGPCDILINGAGGNHPKATT--DNEF---------------------------------------HE-L-----IEPT  115 (278)
T ss_pred             HHcCCCCEEEECCCCCCccccc--cccc---------------------------------------cc-c-----cccc
Confidence            8888999999999864332100  0000                                       00 0     0112


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       116 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~Y~~sK  178 (278)
T PRK08277        116 KTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAFTPLTKVPAYSAAK  178 (278)
T ss_pred             cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhcCCCCCCchhHHHH
Confidence            4567888999999999999999999999999998765 69999999999999999999999987

>PRK08643 acetoin reductase; Validated

Probab=99.93  E-value=2.8e-25  Score=193.18  Aligned_cols=155  Identities=26%  Similarity=0.362  Sum_probs=130.1

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||++|||.+++++|+++|++|++++|+.+..+++...+...   +.++.++++|+++++++.++         
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~---------   69 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD---GGKAIAVKADVSDRDQVFAA---------   69 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHH---------
Confidence            789999999999999999999999999999999887777766655433   24566677777777776666         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.++++++|++|||||.....++.
T Consensus        70 -----------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~   96 (256)
T PRK08643         70 -----------------------------------------------------VRQVVDTFGDLNVVVNNAGVAPTTPIE   96 (256)
T ss_pred             -----------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence                                                                 666666677777777777776666778


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++++++|+.+++++++.++|.|.+++.+|+||++||..+..+.|+.+.|++||
T Consensus        97 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  156 (256)
T PRK08643         97 TITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTK  156 (256)
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHH
Confidence            888999999999999999999999999998765458999999999999999999999987

>PRK05855 short chain dehydrogenase; Validated

Probab=99.93  E-value=1.6e-25  Score=215.33  Aligned_cols=162  Identities=27%  Similarity=0.370  Sum_probs=137.6

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .....+.+++++||||++|||.++|++|+++|++|++++|+.+.++++.+.+...+   .++.++.+|++|++++.++  
T Consensus       308 ~~~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~--  382 (582)
T PRK05855        308 RPRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG---AVAHAYRVDVSDADAMEAF--  382 (582)
T ss_pred             cccccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHH--
Confidence            44456788999999999999999999999999999999999887777766665443   4567777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|++|||||.
T Consensus       383 ------------------------------------------------------------~~~~~~~~g~id~lv~~Ag~  402 (582)
T PRK05855        383 ------------------------------------------------------------AEWVRAEHGVPDIVVNNAGI  402 (582)
T ss_pred             ------------------------------------------------------------HHHHHHhcCCCcEEEECCcc
Confidence                                                                        66666666777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...+++.+.+.++|++++++|+.|++.++++++|.|.+++.+|+||++||.++..+.++.+.|++||
T Consensus       403 ~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  469 (582)
T PRK05855        403 GMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSK  469 (582)
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHH
Confidence            6667788899999999999999999999999999998876458999999999999999999999998

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.93  E-value=1.4e-25  Score=196.08  Aligned_cols=154  Identities=28%  Similarity=0.378  Sum_probs=121.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+++.++++.+..      +.++.++++|++|+++++++     
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~-----   70 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF------GDHVLVVEGDVTSYADNQRA-----   70 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCcceEEEccCCCHHHHHHH-----
Confidence            3478999999999999999999999999999999999876665544332      23566778888888887777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-  200 (265)
                                                                               ++++.+.++++|++|||||+.. 
T Consensus        71 ---------------------------------------------------------~~~~~~~~g~id~li~~ag~~~~   93 (263)
T PRK06200         71 ---------------------------------------------------------VDQTVDAFGKLDCFVGNAGIWDY   93 (263)
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCCEEEECCCCccc
Confidence                                                                     4555555555555555555432 


Q ss_pred             cccccccchHH----HHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEV----DRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~----~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++    |++++++|+.+++++++.++|.|.++  +|+||+++|.++..+.++.++|++||
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~~sK  160 (263)
T PRK06200         94 NTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFYPGGGGPLYTASK  160 (263)
T ss_pred             CCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCCchhHHHH
Confidence            23444555554    89999999999999999999998764  48999999999999989999999987

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.8e-25  Score=192.81  Aligned_cols=158  Identities=22%  Similarity=0.247  Sum_probs=125.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEe-cCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++|+++||||++|||.+++++|+++|++|++.+ |+.+..++...++...   +.+...+++|+++.+++..+++.+.+
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN---GGSAFSIGANLESLHGVEALYSSLDN   78 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc---CCceEEEecccCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999998875 4555555555444432   34567788888888877777333321


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc--cccEEEecccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG--CLDILINNAGRSQ  200 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g--~ldilVnnAG~~~  200 (265)
                                                                                ...+.++  ++|++|||||...
T Consensus        79 ----------------------------------------------------------~~~~~~g~~~id~lv~~Ag~~~  100 (252)
T PRK12747         79 ----------------------------------------------------------ELQNRTGSTKFDILINNAGIGP  100 (252)
T ss_pred             ----------------------------------------------------------HhhhhcCCCCCCEEEECCCcCC
Confidence                                                                      1112233  7888888888765


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++++++|+.++++++++++|.|.+   .|+||++||.++..+.++.+.|++||
T Consensus       101 ~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK12747        101 GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLPDFIAYSMTK  162 (252)
T ss_pred             CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCcccccCCCCchhHHHHH
Confidence            667788899999999999999999999999999964   48999999999999999999999987

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.1e-25  Score=192.43  Aligned_cols=159  Identities=27%  Similarity=0.382  Sum_probs=130.1

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ++++++|+++||||++|||.+++++|+++|++|++++|+.+.++++.+.+.+.+   .+..++++|+++.++++++    
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~----   75 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG---GKAEALACHIGEMEQIDAL----   75 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHH----
Confidence            356889999999999999999999999999999999998877776666654432   4566778888888877777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-  199 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-  199 (265)
                                                                                ++++.+.++++|++|||||.. 
T Consensus        76 ----------------------------------------------------------~~~~~~~~~~id~li~~ag~~~   97 (252)
T PRK07035         76 ----------------------------------------------------------FAHIRERHGRLDILVNNAAANP   97 (252)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCcCC
Confidence                                                                      555555555566666666543 


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+|+++||..+..+.++++.|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK07035         98 YFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPGDFQGIYSITK  162 (252)
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCCCCCcchHHHH
Confidence            235566788899999999999999999999999997665 68999999999999999999999987

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.2e-25  Score=198.66  Aligned_cols=168  Identities=29%  Similarity=0.381  Sum_probs=130.0

Q ss_pred             HHHHHhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChH
Q psy9256          32 FFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTK  111 (265)
Q Consensus        32 ~~~~~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~  111 (265)
                      +..++..++...+.+|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++++|++|++
T Consensus        26 ~~~~~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~---~~~~~~~~Dl~d~~  102 (293)
T PRK05866         26 LLINRPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAG---GDAMAVPCDLSDLD  102 (293)
T ss_pred             hhcCCCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHH
Confidence            344445555667889999999999999999999999999999999999887777766655432   45677788888888


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccE
Q psy9256         112 YHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDI  191 (265)
Q Consensus       112 ~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldi  191 (265)
                      ++.++                                                              ++++.+.+|++|+
T Consensus       103 ~v~~~--------------------------------------------------------------~~~~~~~~g~id~  120 (293)
T PRK05866        103 AVDAL--------------------------------------------------------------VADVEKRIGGVDI  120 (293)
T ss_pred             HHHHH--------------------------------------------------------------HHHHHHHcCCCCE
Confidence            87777                                                              4444455555555


Q ss_pred             EEeccccccccccccc--chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-CCCCCCccccCC
Q psy9256         192 LINNAGRSQRAAWEDI--ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-GAPYSGSYTDHL  265 (265)
Q Consensus       192 lVnnAG~~~~~~~~~~--~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-~~~~~~~Y~asK  265 (265)
                      +|||||.....++.+.  +.+++++.+++|+.|++.++++++|.|.+++ .|+||++||.++.. +.|+.++|++||
T Consensus       121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~p~~~~Y~asK  196 (293)
T PRK05866        121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEASPLFSVYNASK  196 (293)
T ss_pred             EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCCcchHHHHH
Confidence            5555555444444432  3578899999999999999999999998765 69999999987655 367888999987

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=1.9e-25  Score=195.18  Aligned_cols=152  Identities=21%  Similarity=0.214  Sum_probs=114.0

Q ss_pred             cccCCcEEEEcCC--CCchhHHHHHHHHHcCCeEEEEecCC--CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          42 NYFNNKVVWITGA--SSGIGEALALQLSKCGAKLVLSARSS--SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        42 ~~l~gk~vlItGa--s~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      ..+.+|+++||||  ++|||+++|++|+++|++|++++|+.  +.++++.+   +.+   .++.++++|++|++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~---~~~---~~~~~~~~Dv~~~~~i~~~~   76 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAK---RLP---EPAPVLELDVTNEEHLASLA   76 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHH---hcC---CCCcEEeCCCCCHHHHHHHH
Confidence            3478999999999  89999999999999999999999864  22232222   122   24566778888888877775


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                      +.+.+.+|+                                                              +|++|||||
T Consensus        77 ~~~~~~~g~--------------------------------------------------------------iD~li~nAG   94 (256)
T PRK07889         77 DRVREHVDG--------------------------------------------------------------LDGVVHSIG   94 (256)
T ss_pred             HHHHHHcCC--------------------------------------------------------------CcEEEEccc
Confidence            555444444                                                              455555554


Q ss_pred             cccc----ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQR----AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +...    .++.+.+.++|++++++|+.+++++++.++|+|.+   +|+||++||. +..+.|.++.|++||
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~-~~~~~~~~~~Y~asK  162 (256)
T PRK07889         95 FAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFD-ATVAWPAYDWMGVAK  162 (256)
T ss_pred             cccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeec-ccccCCccchhHHHH
Confidence            4321    34667788999999999999999999999999963   4899999875 455678888899998

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=2.8e-25  Score=199.10  Aligned_cols=159  Identities=27%  Similarity=0.341  Sum_probs=128.7

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..+++||+++||||++|||.++|++|+++|++|++.+++. +..+++.+++...   +.++..+++|++|++++.++   
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~---g~~~~~~~~Dv~d~~~~~~~---   80 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA---GAKAVAVAGDISQRATADEL---   80 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc---CCeEEEEeCCCCCHHHHHHH---
Confidence            4678999999999999999999999999999999998753 3444555544432   34666777777777777766   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++.+.+ +|++|++|||||..
T Consensus        81 -----------------------------------------------------------~~~~~~-~g~iD~li~nAG~~  100 (306)
T PRK07792         81 -----------------------------------------------------------VATAVG-LGGLDIVVNNAGIT  100 (306)
T ss_pred             -----------------------------------------------------------HHHHHH-hCCCCEEEECCCCC
Confidence                                                                       666666 67777777777776


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc------CCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE------QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~------~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.+++++++.+.|+|.++.      ..|+||++||.++..+.++++.|++||
T Consensus       101 ~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  172 (306)
T PRK07792        101 RDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAK  172 (306)
T ss_pred             CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHHHHH
Confidence            666777889999999999999999999999999997542      137999999999999989999999987

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.93  E-value=5.2e-25  Score=192.25  Aligned_cols=159  Identities=28%  Similarity=0.371  Sum_probs=129.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++++|+++||||++|||.++|++|+++|++|++++|+.+ ..+++.+.+...   +.++.++.+|++|++++.++    
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~i~~~----   75 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA---GGEAIAVKGDVTVESDVVNL----   75 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---CCeEEEEEecCCCHHHHHHH----
Confidence            3578999999999999999999999999999999888543 334444444332   24566777777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++.+.++++++|++|||||...
T Consensus        76 ----------------------------------------------------------~~~~~~~~g~id~lv~~ag~~~   97 (261)
T PRK08936         76 ----------------------------------------------------------IQTAVKEFGTLDVMINNAGIEN   97 (261)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666666777777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++..|+||++||..+..+.|++++|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  162 (261)
T PRK08936         98 AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASK  162 (261)
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHH
Confidence            66777888999999999999999999999999998765468999999999999999999999987

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=3.8e-25  Score=192.33  Aligned_cols=160  Identities=24%  Similarity=0.373  Sum_probs=135.4

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ++..++||+++||||++|||.+++++|+++|++|++++|+++.+++..+++...   +.++.++.+|+++++++.++   
T Consensus         5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~---   78 (256)
T PRK06124          5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA---GGAAEALAFDIADEEAVAAA---   78 (256)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHH---
Confidence            355688999999999999999999999999999999999987777666655443   24566777777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+.++++|++|||||..
T Consensus        79 -----------------------------------------------------------~~~~~~~~~~id~vi~~ag~~   99 (256)
T PRK06124         79 -----------------------------------------------------------FARIDAEHGRLDILVNNVGAR   99 (256)
T ss_pred             -----------------------------------------------------------HHHHHHhcCCCCEEEECCCCC
Confidence                                                                       666666777778888887776


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|++|++||.++..+.++.++|++||
T Consensus       100 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK  164 (256)
T PRK06124        100 DRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARAGDAVYPAAK  164 (256)
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCCCccHhHHHH
Confidence            666788888999999999999999999999999997665 69999999999999999999999987

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4e-25  Score=191.86  Aligned_cols=157  Identities=29%  Similarity=0.392  Sum_probs=131.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .+.+|+++||||++|||.+++++|+++|++|++++|+++.+++..+.+...+   .++.++.+|+++++++.++      
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~------   74 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG---GEALFVACDVTRDAEVKAL------   74 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHH------
Confidence            4679999999999999999999999999999999999887777666654432   4677778888888877777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc-
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~-  201 (265)
                                                                              ++++.+++|++|++|||||.... 
T Consensus        75 --------------------------------------------------------~~~~~~~~g~id~li~~ag~~~~~   98 (253)
T PRK06172         75 --------------------------------------------------------VEQTIAAYGRLDYAFNNAGIEIEQ   98 (253)
T ss_pred             --------------------------------------------------------HHHHHHHhCCCCEEEECCCCCCCC
Confidence                                                                    66666666677777777776533 


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|++|++||..+..+.++.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK  161 (253)
T PRK06172         99 GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAPKMSIYAASK  161 (253)
T ss_pred             CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCCCCchhHHHH
Confidence            4467788999999999999999999999999998765 68999999999999999999999987

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.93  E-value=5e-25  Score=190.56  Aligned_cols=156  Identities=28%  Similarity=0.448  Sum_probs=126.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||.++|++|+++|++|++++|++  .++..+.+...   +.++.++++|+++++++.++      
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~------   70 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEAL---GRRFLSLTADLSDIEAIKAL------   70 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhc---CCceEEEECCCCCHHHHHHH------
Confidence            47899999999999999999999999999999999864  23333433332   24567777888887777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+.++++|++|||||.....
T Consensus        71 --------------------------------------------------------~~~~~~~~~~~d~li~~ag~~~~~   94 (248)
T TIGR01832        71 --------------------------------------------------------VDSAVEEFGHIDILVNNAGIIRRA   94 (248)
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    555555566667777777766556


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.+++.++++++|.|++++..|+||++||.++..+.++.+.|++||
T Consensus        95 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  157 (248)
T TIGR01832        95 DAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASK  157 (248)
T ss_pred             ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHH
Confidence            667788899999999999999999999999998654358999999999998888899999987

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.6e-25  Score=192.29  Aligned_cols=151  Identities=25%  Similarity=0.386  Sum_probs=124.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||.+++++|+++|++|++++|+.+.        ..   .+.++.++++|+++++++.++     
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~---~~~~~~~~~~D~~~~~~~~~~-----   65 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TV---DGRPAEFHAADVRDPDQVAAL-----   65 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hh---cCCceEEEEccCCCHHHHHHH-----
Confidence            35789999999999999999999999999999999997643        01   124566777888887777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++.+.++++++|++|||||....
T Consensus        66 ---------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~   88 (252)
T PRK07856         66 ---------------------------------------------------------VDAIVERHGRLDVLVNNAGGSPY   88 (252)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     55566666667777777766555


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++.+++++.|.|.++...|+||++||.++..+.++.+.|++||
T Consensus        89 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  152 (252)
T PRK07856         89 ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK  152 (252)
T ss_pred             CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence            6677788899999999999999999999999998754458999999999999999999999987

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.93  E-value=2.9e-25  Score=193.75  Aligned_cols=152  Identities=23%  Similarity=0.243  Sum_probs=122.6

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      +++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.    .++.++++|++|+++++++           
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~Dv~d~~~~~~~-----------   66 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY----GEVYAVKADLSDKDDLKNL-----------   66 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc----CCceEEEcCCCCHHHHHHH-----------
Confidence            6999999999999999999999999999999988777766665432    2566778888888888777           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc--ccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ--RAAWE  205 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~--~~~~~  205 (265)
                                                                         ++++.++++++|++|||||...  +.++.
T Consensus        67 ---------------------------------------------------~~~~~~~~g~id~li~naG~~~~~~~~~~   95 (259)
T PRK08340         67 ---------------------------------------------------VKEAWELLGGIDALVWNAGNVRCEPCMLH   95 (259)
T ss_pred             ---------------------------------------------------HHHHHHhcCCCCEEEECCCCCCCCccccc
Confidence                                                               4555555555555555555432  23566


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|.+.+++|+.+++++++.++|.|.+++.+|+||++||.++..+.|....|++||
T Consensus        96 ~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  155 (259)
T PRK08340         96 EAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTR  155 (259)
T ss_pred             cccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHH
Confidence            788899999999999999999999999987544469999999999999989999999987

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.8e-25  Score=193.61  Aligned_cols=153  Identities=31%  Similarity=0.379  Sum_probs=122.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||++|||.+++++|+++|++|++++|+.+.+++..+.+.   .. .++.++.+|++|++++.++         
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~-~~~~~~~~Dl~~~~~i~~~---------   68 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLP---KA-ARVSVYAADVRDADALAAA---------   68 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc---cC-CeeEEEEcCCCCHHHHHHH---------
Confidence            4789999999999999999999999999999998766655444332   11 2677778888887777777         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc-
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-  204 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~-  204 (265)
                                                                           ++++.++++++|++|||||....... 
T Consensus        69 -----------------------------------------------------~~~~~~~~g~id~lv~~ag~~~~~~~~   95 (257)
T PRK07024         69 -----------------------------------------------------AADFIAAHGLPDVVIANAGISVGTLTE   95 (257)
T ss_pred             -----------------------------------------------------HHHHHHhCCCCCEEEECCCcCCCcccc
Confidence                                                                 55555555666666666665433322 


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.+.++|++.+++|+.|++++++.++|.|.+++ .|+||++||.++..+.|+.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK  155 (257)
T PRK07024         96 EREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLPGAGAYSASK  155 (257)
T ss_pred             ccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCCcchHHHH
Confidence            3367889999999999999999999999998765 79999999999999999999999987

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.1e-25  Score=192.77  Aligned_cols=159  Identities=24%  Similarity=0.364  Sum_probs=132.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+.++++.+.+...   +.++.++.+|+++++++.++     
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~-----   77 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA---GRRAHVVAADLAHPEATAGL-----   77 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHH-----
Confidence            3578999999999999999999999999999999999877766665555432   24566777777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.++++++|++|||||....
T Consensus        78 ---------------------------------------------------------~~~~~~~~~~id~vi~~Ag~~~~  100 (263)
T PRK07814         78 ---------------------------------------------------------AGQAVEAFGRLDIVVNNVGGTMP  100 (263)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     66666666777777777776655


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++.+++++.|.|.+....|++|++||.++..+.++++.|++||
T Consensus       101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  164 (263)
T PRK07814        101 NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK  164 (263)
T ss_pred             CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence            6677888999999999999999999999999998754469999999999999999999999987

>PRK05717 oxidoreductase; Validated

Probab=99.93  E-value=4.2e-25  Score=192.22  Aligned_cols=156  Identities=23%  Similarity=0.309  Sum_probs=124.9

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +...++||+++||||++|||.++|++|+++|++|++++|+++..++..+.   .   +.++.++++|+++++++.++   
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~---~---~~~~~~~~~Dl~~~~~~~~~---   74 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKA---L---GENAWFIAMDVADEAQVAAG---   74 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH---c---CCceEEEEccCCCHHHHHHH---
Confidence            44578899999999999999999999999999999999876655443222   1   13566777777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|++|||||..
T Consensus        75 -----------------------------------------------------------~~~~~~~~g~id~li~~ag~~   95 (255)
T PRK05717         75 -----------------------------------------------------------VAEVLGQFGRLDALVCNAAIA   95 (255)
T ss_pred             -----------------------------------------------------------HHHHHHHhCCCCEEEECCCcc
Confidence                                                                       555555556666666666654


Q ss_pred             cc--ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QR--AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..  .++.+.+.++|++.+++|+.+++.+++.+.|+|.++  .|+||++||.++..+.++++.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii~~sS~~~~~~~~~~~~Y~~sK  161 (255)
T PRK05717         96 DPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIVNLASTRARQSEPDTEAYAASK  161 (255)
T ss_pred             cCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEEEEcchhhcCCCCCCcchHHHH
Confidence            32  456778889999999999999999999999999764  48999999999999999999999987

>PRK06182 short chain dehydrogenase; Validated

Probab=99.93  E-value=3.3e-25  Score=194.83  Aligned_cols=150  Identities=31%  Similarity=0.488  Sum_probs=126.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |++|+++||||++|||++++++|+++|++|++++|+++++++..+         ..+.++.+|++|+++++++       
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~---------~~~~~~~~Dv~~~~~~~~~-------   64 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS---------LGVHPLSLDVTDEASIKAA-------   64 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---------CCCeEEEeeCCCHHHHHHH-------
Confidence            357999999999999999999999999999999998765543321         1355677777777777766       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.+.++++|++|||||....++
T Consensus        65 -------------------------------------------------------~~~~~~~~~~id~li~~ag~~~~~~   89 (273)
T PRK06182         65 -------------------------------------------------------VDTIIAEEGRIDVLVNNAGYGSYGA   89 (273)
T ss_pred             -------------------------------------------------------HHHHHHhcCCCCEEEECCCcCCCCc
Confidence                                                                   6666666777777788877776777


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus        90 ~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (273)
T PRK06182         90 IEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTPLGAWYHATK  150 (273)
T ss_pred             hhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCCCccHhHHHH
Confidence            88899999999999999999999999999998765 68999999999988888888999987

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.4e-25  Score=193.44  Aligned_cols=157  Identities=18%  Similarity=0.295  Sum_probs=129.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+++|+++||||++|||.+++++|++.|++|++++|+++.+++..+.+...+   .+..++++|++++++++++     
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~i~~~-----   76 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG---PEGLGVSADVRDYAAVEAA-----   76 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---CceEEEECCCCCHHHHHHH-----
Confidence            45789999999999999999999999999999999998777666555554432   3556777888887777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.++++|++|||||....
T Consensus        77 ---------------------------------------------------------~~~~~~~~~~iD~vi~~ag~~~~   99 (264)
T PRK07576         77 ---------------------------------------------------------FAQIADEFGPIDVLVSGAAGNFP   99 (264)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     66666666667777777766555


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.|++++++++.|.|.++  +|+|+++||.++..+.++++.|++||
T Consensus       100 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~~~~~~~~~~~~Y~asK  161 (264)
T PRK07576        100 APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAPQAFVPMPMQAHVCAAK  161 (264)
T ss_pred             CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECChhhccCCCCccHHHHHH
Confidence            667788889999999999999999999999998754  48999999999988889999999887

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=4.1e-26  Score=203.81  Aligned_cols=177  Identities=16%  Similarity=0.191  Sum_probs=127.4

Q ss_pred             ccccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhC-------CCCC-----cEEEEeec
Q psy9256          41 LNYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG-------AHPQ-----SIYTLTLD  106 (265)
Q Consensus        41 ~~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~-----~~~~~~~D  106 (265)
                      +.+++||+++|||++  +|||+++|+.|+++|++|++.++. +.++...+......       ..+.     ++..+..|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV-PIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc-chhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            457899999999996  999999999999999999997764 22222222111000       0000     11112333


Q ss_pred             CCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc
Q psy9256         107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF  186 (265)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~  186 (265)
                      +++++.+..-              |                             +.....-|+.| ++++++++++.+++
T Consensus        82 ~~~~~~v~~~--------------i-----------------------------~~~~~~~~~~~-~si~~~~~~v~~~~  117 (299)
T PRK06300         82 FDTPEDVPEE--------------I-----------------------------RENKRYKDLSG-YTISEVAEQVKKDF  117 (299)
T ss_pred             cCCCEEeecc--------------c-----------------------------CccccccCCCH-HHHHHHHHHHHHHc
Confidence            4443321111              0                             00012223444 56999999999999


Q ss_pred             ccccEEEecccccc--cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCC-cccc
Q psy9256         187 GCLDILINNAGRSQ--RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSG-SYTD  263 (265)
Q Consensus       187 g~ldilVnnAG~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~-~Y~a  263 (265)
                      |++|+||||||...  ..++.+.+.++|++++++|+.|+++++++++|+|.+   +|+||++||+++..+.|++. .|++
T Consensus       118 G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~---~G~ii~iss~~~~~~~p~~~~~Y~a  194 (299)
T PRK06300        118 GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP---GGSTISLTYLASMRAVPGYGGGMSS  194 (299)
T ss_pred             CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCeEEEEeehhhcCcCCCccHHHHH
Confidence            99999999999753  468899999999999999999999999999999964   48999999999999888875 8999


Q ss_pred             CC
Q psy9256         264 HL  265 (265)
Q Consensus       264 sK  265 (265)
                      ||
T Consensus       195 sK  196 (299)
T PRK06300        195 AK  196 (299)
T ss_pred             HH
Confidence            88

>PRK06128 oxidoreductase; Provisional

Probab=99.93  E-value=5.6e-25  Score=196.41  Aligned_cols=157  Identities=25%  Similarity=0.379  Sum_probs=124.3

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC--cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS--NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +..++||+++||||++|||.+++++|+++|++|++++++.+  ..++..+.+...   +.+..++++|++|+++++++  
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~--  124 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE---GRKAVALPGDLKDEAFCRQL--  124 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc---CCeEEEEecCCCCHHHHHHH--
Confidence            34578999999999999999999999999999999887643  233333333332   24566677777777777766  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+.++++|++|||||.
T Consensus       125 ------------------------------------------------------------~~~~~~~~g~iD~lV~nAg~  144 (300)
T PRK06128        125 ------------------------------------------------------------VERAVKELGGLDILVNIAGK  144 (300)
T ss_pred             ------------------------------------------------------------HHHHHHHhCCCCEEEECCcc
Confidence                                                                        66666666667777777766


Q ss_pred             cc-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQ-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .. ..++.+.+.++|++.+++|+.|+++++++++|.|.+   +|+||++||.++..+.++...|++||
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~asK  209 (300)
T PRK06128        145 QTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSYQPSPTLLDYASTK  209 (300)
T ss_pred             cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCccccCCCCCchhHHHHH
Confidence            43 356778899999999999999999999999999863   47999999999999999999999987

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.4e-25  Score=195.46  Aligned_cols=149  Identities=29%  Similarity=0.398  Sum_probs=125.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .+|+++||||++|||.++|++|+++|++|++++|+++.++++.+         ..+.++.+|++|+++++++        
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~---------~~~~~~~~Dl~d~~~~~~~--------   65 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA---------EGLEAFQLDYAEPESIAAL--------   65 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---------CCceEEEccCCCHHHHHHH--------
Confidence            46899999999999999999999999999999998766554332         1355677777777777776        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc-ccccEEEeccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAA  203 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~-g~ldilVnnAG~~~~~~  203 (265)
                                                                            ++++.+.+ |++|++|||||....++
T Consensus        66 ------------------------------------------------------~~~~~~~~~g~id~li~~Ag~~~~~~   91 (277)
T PRK05993         66 ------------------------------------------------------VAQVLELSGGRLDALFNNGAYGQPGA   91 (277)
T ss_pred             ------------------------------------------------------HHHHHHHcCCCccEEEECCCcCCCCC
Confidence                                                                  55555444 57777888877777777


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++.+++|+.|++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus        92 ~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  152 (277)
T PRK05993         92 VEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPMKYRGAYNASK  152 (277)
T ss_pred             cccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCCCccchHHHHH
Confidence            88889999999999999999999999999998765 68999999999999999999999987

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.93  E-value=6e-25  Score=191.30  Aligned_cols=156  Identities=29%  Similarity=0.392  Sum_probs=129.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+.+|+++||||++|||.++|++|+++|++|++++|+.+..+++.+.+   .   .++.++++|++|++++.++     
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~~~~~-----   70 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---G---PAAIAVSLDVTRQDSIDRI-----   70 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---C---CceEEEEccCCCHHHHHHH-----
Confidence            3577999999999999999999999999999999999887666554432   1   3466677777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.++++|++|||||....
T Consensus        71 ---------------------------------------------------------~~~~~~~~~~id~li~~ag~~~~   93 (257)
T PRK07067         71 ---------------------------------------------------------VAAAVERFGGIDILFNNAALFDM   93 (257)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCC
Confidence                                                                     66666666777777777776666


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+|+||++||..+..+.++.++|++||
T Consensus        94 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  157 (257)
T PRK07067         94 APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATK  157 (257)
T ss_pred             CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhH
Confidence            6777888999999999999999999999999998765458999999999999999999999998

>PRK07985 oxidoreductase; Provisional

Probab=99.93  E-value=6.6e-25  Score=195.59  Aligned_cols=155  Identities=25%  Similarity=0.363  Sum_probs=123.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC--CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS--SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++||+++||||++|||.++|++|+++|++|++++|+.  +..+++.+.+...   +.++.++.+|++|++++.++    
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~----  118 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC---GRKAVLLPGDLSDEKFARSL----  118 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc---CCeEEEEEccCCCHHHHHHH----
Confidence            47899999999999999999999999999999988753  3344444433322   24566677777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-  199 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-  199 (265)
                                                                                ++++.+.+|++|++|||||.. 
T Consensus       119 ----------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~~  140 (294)
T PRK07985        119 ----------------------------------------------------------VHEAHKALGGLDIMALVAGKQV  140 (294)
T ss_pred             ----------------------------------------------------------HHHHHHHhCCCCEEEECCCCCc
Confidence                                                                      555555566666666666653 


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.++++|++++++|+.+++++++++.|+|.+   +|+||++||.++..+.++.++|++||
T Consensus       141 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~~~~~~~~~~~~Y~asK  203 (294)
T PRK07985        141 AIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSIQAYQPSPHLLDYAATK  203 (294)
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCchhccCCCCcchhHHHH
Confidence            2356778889999999999999999999999999953   48999999999999999999999987

>KOG1210|consensus

Probab=99.93  E-value=8.6e-25  Score=190.73  Aligned_cols=156  Identities=25%  Similarity=0.336  Sum_probs=137.6

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      +.++|||||+|||+++|+++..+|++|.++.|+.+++.+++++++....... +.+..+|++|.                
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~-v~~~S~d~~~Y----------------   96 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVED-VSYKSVDVIDY----------------   96 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccce-eeEeccccccH----------------
Confidence            7899999999999999999999999999999999999999888765543221 44444555444                


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                    +++..+++++.+..+.+|.+++|||...++.+++
T Consensus        97 ----------------------------------------------~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~  130 (331)
T KOG1210|consen   97 ----------------------------------------------DSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFED  130 (331)
T ss_pred             ----------------------------------------------HHHHHHHhhhhhccCCcceEEEecCccccccccc
Confidence                                                          4455558888888899999999999999999999


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++++++..+++|++|+++++++.+|.|+++.+.|+|+.+||.++..+.+++++|++||
T Consensus       131 ~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK  189 (331)
T KOG1210|consen  131 LSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSK  189 (331)
T ss_pred             CCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHH
Confidence            99999999999999999999999999999988778999999999999999999999997

>KOG1209|consensus

Probab=99.93  E-value=2.2e-25  Score=184.51  Aligned_cols=149  Identities=29%  Similarity=0.397  Sum_probs=126.1

Q ss_pred             CCcEEEEcCCCC-chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASS-GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ..|.++|||||+ |||.++|++|+++|+.|+.+.|+.+....+...        .++..+.+|+++++++..+       
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~--------~gl~~~kLDV~~~~~V~~v-------   70 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ--------FGLKPYKLDVSKPEEVVTV-------   70 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh--------hCCeeEEeccCChHHHHHH-------
Confidence            357888888876 899999999999999999999988776655432        3477788888888888877       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHh-hcccccEEEecccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQ-QFGCLDILINNAGRSQRA  202 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~-~~g~ldilVnnAG~~~~~  202 (265)
                                                                             ..++++ ..|.+|.|+||||..-..
T Consensus        71 -------------------------------------------------------~~evr~~~~Gkld~L~NNAG~~C~~   95 (289)
T KOG1209|consen   71 -------------------------------------------------------SGEVRANPDGKLDLLYNNAGQSCTF   95 (289)
T ss_pred             -------------------------------------------------------HHHHhhCCCCceEEEEcCCCCCccc
Confidence                                                                   555555 567777777777777677


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |..|.+.++.+++|++|++|+.+++|++...+.+.  +|.|||+.|.++.+|.|+.+.|+|||
T Consensus        96 Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika--KGtIVnvgSl~~~vpfpf~~iYsAsK  156 (289)
T KOG1209|consen   96 PALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA--KGTIVNVGSLAGVVPFPFGSIYSASK  156 (289)
T ss_pred             ccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--cceEEEecceeEEeccchhhhhhHHH
Confidence            88899999999999999999999999999777665  59999999999999999999999997

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.2e-24  Score=189.99  Aligned_cols=161  Identities=25%  Similarity=0.330  Sum_probs=131.7

Q ss_pred             cccCCcEEEEcCCCC-chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASS-GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..+.+|+++||||++ |||.+++++|+++|++|++++|+.+.+++..+.+.+.. ...++..+++|++++++++++    
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~----   87 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAEL-GLGRVEAVVCDVTSEAQVDAL----   87 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEEccCCCHHHHHHH----
Confidence            346789999999984 99999999999999999999998877777666554421 113566677777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.+|++|++|||||...
T Consensus        88 ----------------------------------------------------------~~~~~~~~g~id~li~~ag~~~  109 (262)
T PRK07831         88 ----------------------------------------------------------IDAAVERLGRLDVLVNNAGLGG  109 (262)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666666677777777777666


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++++++.++|.|+++...|+||+++|..+..+.++...|++||
T Consensus       110 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  174 (262)
T PRK07831        110 QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAK  174 (262)
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHH
Confidence            66778888999999999999999999999999998664368999999999999989999999987

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.93  E-value=1.3e-24  Score=189.39  Aligned_cols=155  Identities=31%  Similarity=0.386  Sum_probs=121.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+++|+++||||++|||.+++++|+++|++|++++|++ ..+++.+++...   +.++.++.+|+++++++.++     
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~-----   74 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA---GGEALALTADLETYAGAQAA-----   74 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc---CCeEEEEEEeCCCHHHHHHH-----
Confidence            347899999999999999999999999999999999974 333443433322   24566777777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-c
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-Q  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-~  200 (265)
                                                                               ++++.++++++|++|||||.. .
T Consensus        75 ---------------------------------------------------------~~~~~~~~~~id~lv~nAg~~~~   97 (260)
T PRK12823         75 ---------------------------------------------------------MAAAVEAFGRIDVLINNVGGTIW   97 (260)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCeEEEECCccccC
Confidence                                                                     555656666667777776653 3


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++.  .+...+|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~--~~~~~~Y~~sK  159 (260)
T PRK12823         98 AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATR--GINRVPYSAAK  159 (260)
T ss_pred             CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCcccc--CCCCCccHHHH
Confidence            46677889999999999999999999999999998765 6899999998764  24567899987

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=8.1e-25  Score=190.39  Aligned_cols=152  Identities=26%  Similarity=0.349  Sum_probs=120.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .+.||+++||||++|||.++|++|+++|++|++++++.+..   .+.+..     .++.++++|++|++++.++      
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~-----~~~~~~~~Dl~~~~~~~~~------   69 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE-----KGVFTIKCDVGNRDQVKKS------   69 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh-----CCCeEEEecCCCHHHHHHH------
Confidence            46789999999999999999999999999999887654322   111111     1345666777777666666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+.++++|++|||||.....
T Consensus        70 --------------------------------------------------------~~~~~~~~~~id~li~~ag~~~~~   93 (255)
T PRK06463         70 --------------------------------------------------------KEVVEKEFGRVDVLVNNAGIMYLM   93 (255)
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCCC
Confidence                                                                    666666677777777777776566


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-CCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-GAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++.. +.++.+.|++||
T Consensus        94 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asK  156 (255)
T PRK06463         94 PFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAAEGTTFYAITK  156 (255)
T ss_pred             ChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCCCCccHhHHHH
Confidence            777888999999999999999999999999998665 69999999998875 456778899987

>PRK12743 oxidoreductase; Provisional

Probab=99.92  E-value=1.2e-24  Score=189.55  Aligned_cols=156  Identities=25%  Similarity=0.371  Sum_probs=126.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ++|+++||||++|||.+++++|+++|++|++++++ .+..+++.+++...   +.++.++.+|++++++++++       
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~-------   70 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH---GVRAEIRQLDLSDLPEGAQA-------   70 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHH-------
Confidence            36899999999999999999999999999988654 44555555544433   35677777888887777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.++++++|++|||||.....+
T Consensus        71 -------------------------------------------------------~~~~~~~~~~id~li~~ag~~~~~~   95 (256)
T PRK12743         71 -------------------------------------------------------LDKLIQRLGRIDVLVNNAGAMTKAP   95 (256)
T ss_pred             -------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCC
Confidence                                                                   6666666667777777777665556


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++.+++|+.+++++++++.|.|.+++.+|+||++||..+..+.++.++|+++|
T Consensus        96 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  157 (256)
T PRK12743         96 FLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAK  157 (256)
T ss_pred             hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHH
Confidence            67788999999999999999999999999997765458999999999999999999999987

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.92  E-value=1.4e-24  Score=188.89  Aligned_cols=156  Identities=27%  Similarity=0.394  Sum_probs=127.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+..+++.+++...   +.++.++.+|+++++++.++      
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~i~~~------   78 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL---GGQAFACRCDITSEQELSAL------   78 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHH------
Confidence            477999999999999999999999999999999999887777766655443   24677778888888887777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++.+.+.++++|++|||||.....
T Consensus        79 --------------------------------------------------------~~~~~~~~~~~d~li~~ag~~~~~  102 (255)
T PRK06113         79 --------------------------------------------------------ADFALSKLGKVDILVNNAGGGGPK  102 (255)
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    555555556666666666654444


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++ +.+.++|++.+++|+.+++++++++.|.|.+.+ .|+||++||.++..+.+++..|++||
T Consensus       103 ~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  163 (255)
T PRK06113        103 PF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_pred             CC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCcchhHHHH
Confidence            44 577889999999999999999999999997654 68999999999999999999999987

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.92  E-value=7.6e-25  Score=191.43  Aligned_cols=153  Identities=27%  Similarity=0.366  Sum_probs=118.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+.++++.+.      .+.++..+++|+++.+++.++++.+.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA------HGDAVVGVEGDVRSLDDHKEAVARCVA   75 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh------cCCceEEEEeccCCHHHHHHHHHHHHH
Confidence            36799999999999999999999999999999999987665554321      124577788888888888888555555


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-c
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-R  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~  201 (265)
                      .+|++|++|||||                                                              ... .
T Consensus        76 ~~g~id~li~~Ag--------------------------------------------------------------~~~~~   93 (262)
T TIGR03325        76 AFGKIDCLIPNAG--------------------------------------------------------------IWDYS   93 (262)
T ss_pred             HhCCCCEEEECCC--------------------------------------------------------------CCccC
Confidence            5555555555554                                                              321 1


Q ss_pred             ccccccc----hHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIE----LEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~----~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+    .++|++.+++|+.++++++++++|.|.++  +|++|+++|.++..+.++.+.|++||
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~~sK  159 (262)
T TIGR03325        94 TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVIFTISNAGFYPNGGGPLYTAAK  159 (262)
T ss_pred             CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEEEEeccceecCCCCCchhHHHH
Confidence            2232332    35799999999999999999999999764  48999999999999888899999987

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.92  E-value=2.1e-24  Score=187.94  Aligned_cols=157  Identities=20%  Similarity=0.249  Sum_probs=129.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||++|||.+++++|+++|++|++++|+.+..++..+.+..... ..++.++.+|+++++++.++         
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~---------   71 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYG-EGMAYGFGADATSEQSVLAL---------   71 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC-CceeEEEEccCCCHHHHHHH---------
Confidence            78999999999999999999999999999999988777666554443221 13455666666666666655         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.+.++++|++|||||.....++.
T Consensus        72 -----------------------------------------------------~~~~~~~~~~id~vv~~ag~~~~~~~~   98 (259)
T PRK12384         72 -----------------------------------------------------SRGVDEIFGRVDLLVYNAGIAKAAFIT   98 (259)
T ss_pred             -----------------------------------------------------HHHHHHHcCCCCEEEECCCcCCCCCcc
Confidence                                                                 777777778888888888877777788


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++.+++|+.++++++++++|.|.+++..|+||++||.++..+.+..+.|++||
T Consensus        99 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  158 (259)
T PRK12384         99 DFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAK  158 (259)
T ss_pred             cCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHH
Confidence            899999999999999999999999999998764358999999999988888889999987

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.92  E-value=1.1e-24  Score=196.05  Aligned_cols=143  Identities=21%  Similarity=0.171  Sum_probs=110.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ++|+++||||++|||+++|++|+++| ++|++++|+.++.+++.+++.   ..+.++.++++|++|.++++++++     
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~v~~~~~-----   73 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG---MPKDSYTIMHLDLGSLDSVRQFVQ-----   73 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc---CCCCeEEEEEcCCCCHHHHHHHHH-----
Confidence            47899999999999999999999999 999999998877766555442   223456677888888888887744     


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc-c
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-A  202 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~-~  202 (265)
                                                                               ++.+.++++|++|||||+..+ .
T Consensus        74 ---------------------------------------------------------~~~~~~~~iD~lI~nAG~~~~~~   96 (314)
T TIGR01289        74 ---------------------------------------------------------QFRESGRPLDALVCNAAVYFPTA   96 (314)
T ss_pred             ---------------------------------------------------------HHHHhCCCCCEEEECCCccccCc
Confidence                                                                     444444555555555554322 2


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc-CCceEEEEcccccc
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE-QGGHLVVTSSIAGI  252 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~-~~g~IV~isS~ag~  252 (265)
                      +..+.++++|++++++|+.|++++++.++|.|.+++ ..|+||++||.++.
T Consensus        97 ~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~  147 (314)
T TIGR01289        97 KEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN  147 (314)
T ss_pred             cccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence            334568899999999999999999999999998753 14899999999874

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2e-24  Score=187.68  Aligned_cols=155  Identities=27%  Similarity=0.415  Sum_probs=127.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +++|+++||||++|||.++|++|+++|++|++++|+++.++++..++...   +.++.++.+|++|+++++++       
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~-------   72 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL---GRRALAVPTDITDEDQCANL-------   72 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh---CCceEEEecCCCCHHHHHHH-------
Confidence            56899999999999999999999999999999999887766665555433   24567778888887777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-cc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RA  202 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~~  202 (265)
                                                                             ++++.++++++|++|||||... ..
T Consensus        73 -------------------------------------------------------~~~~~~~~g~~d~vi~~ag~~~~~~   97 (258)
T PRK07890         73 -------------------------------------------------------VALALERFGRVDALVNNAFRVPSMK   97 (258)
T ss_pred             -------------------------------------------------------HHHHHHHcCCccEEEECCccCCCCC
Confidence                                                                   5555555666666666666543 25


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.+++.+++++.|.|.++  +|+||++||.++..+.+++..|+++|
T Consensus        98 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~~~~~~Y~~sK  158 (258)
T PRK07890         98 PLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSMVLRHSQPKYGAYKMAK  158 (258)
T ss_pred             CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEechhhccCCCCcchhHHHH
Confidence            66778899999999999999999999999999765  38999999999999999999999987

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-24  Score=191.13  Aligned_cols=152  Identities=32%  Similarity=0.454  Sum_probs=126.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .+|+++||||++|||.+++++|+++|++|++++|+++.++.+.+.      .+.++..+.+|++|++++.++        
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~------~~~~~~~~~~D~~d~~~~~~~--------   68 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL------HPDRALARLLDVTDFDAIDAV--------   68 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh------cCCCeeEEEccCCCHHHHHHH--------
Confidence            578999999999999999999999999999999987655443321      123566677777777777766        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++.+.+.++++|++|||||....++.
T Consensus        69 ------------------------------------------------------~~~~~~~~~~~d~vv~~ag~~~~~~~   94 (277)
T PRK06180         69 ------------------------------------------------------VADAEATFGPIDVLVNNAGYGHEGAI   94 (277)
T ss_pred             ------------------------------------------------------HHHHHHHhCCCCEEEECCCccCCccc
Confidence                                                                  66666666777777777777666778


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.+.++|++++++|+.|++.+++.++|+|.+++ .|+||++||.++..+.|+++.|++||
T Consensus        95 ~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~~~~~Y~~sK  154 (277)
T PRK06180         95 EESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMPGIGYYCGSK  154 (277)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCCCcchhHHHH
Confidence            8889999999999999999999999999998765 68999999999999999999999987

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.5e-24  Score=190.32  Aligned_cols=153  Identities=27%  Similarity=0.376  Sum_probs=130.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||.+++++|+++|++|++++|+.+.++++.+.+...+   .++.++++|+++++++..+          
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~----------   67 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAG---GDGFYQRCDVRDYSQLTAL----------   67 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHH----------
Confidence            479999999999999999999999999999998877777666554432   4566777788777777766          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++++.++++++|++|||||....+++.+
T Consensus        68 ----------------------------------------------------~~~i~~~~~~id~lI~~ag~~~~~~~~~   95 (270)
T PRK05650         68 ----------------------------------------------------AQACEEKWGGIDVIVNNAGVASGGFFEE   95 (270)
T ss_pred             ----------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence                                                                6666667777788888888777777888


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK  153 (270)
T PRK05650         96 LSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGPAMSSYNVAK  153 (270)
T ss_pred             CCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCCCchHHHHHH
Confidence            89999999999999999999999999998765 68999999999999999999999887

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.9e-24  Score=188.47  Aligned_cols=154  Identities=29%  Similarity=0.313  Sum_probs=128.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++....  +.++.++++|++++++++++      
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~------   75 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH--GVDVAVHALDLSSPEAREQL------   75 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEecCCCHHHHHHH------
Confidence            4679999999999999999999999999999999999877776666554332  34567778888887776655      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++    +++++|++|||||.....
T Consensus        76 --------------------------------------------------------~~----~~g~id~lv~~ag~~~~~   95 (259)
T PRK06125         76 --------------------------------------------------------AA----EAGDIDILVNNAGAIPGG   95 (259)
T ss_pred             --------------------------------------------------------HH----HhCCCCEEEECCCCCCCC
Confidence                                                                    32    246778888888776667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||..+..+.+.+..|+++|
T Consensus        96 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~ask  157 (259)
T PRK06125         96 GLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENPDADYICGSAGN  157 (259)
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCCCCCchHhHHHH
Confidence            788899999999999999999999999999998765 68999999999998888888898886

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.92  E-value=2.1e-24  Score=186.40  Aligned_cols=156  Identities=21%  Similarity=0.301  Sum_probs=123.1

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEe-cCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      |++|+++||||++|||.++|++|+++|++|++.. ++.+..++..+++...   +.++..+.+|++|.+++.++      
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~------   71 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL---GFDFIASEGNVGDWDSTKAA------   71 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHH------
Confidence            5689999999999999999999999999988854 3333333333333222   23455566666666666666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+.++++|++|||||.....
T Consensus        72 --------------------------------------------------------~~~~~~~~~~id~li~~ag~~~~~   95 (246)
T PRK12938         72 --------------------------------------------------------FDKVKAEVGEIDVLVNNAGITRDV   95 (246)
T ss_pred             --------------------------------------------------------HHHHHHHhCCCCEEEECCCCCCCC
Confidence                                                                    666766777777777777776656


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.++++|++.+++|+.+++.+++++.|.|.+++ .|+||++||.++..+.++++.|+++|
T Consensus        96 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sK  157 (246)
T PRK12938         96 VFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAK  157 (246)
T ss_pred             ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCCCCChhHHHHH
Confidence            778889999999999999999999999999997764 68999999999999989999999887

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.92  E-value=2e-24  Score=185.72  Aligned_cols=150  Identities=18%  Similarity=0.130  Sum_probs=119.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||++|||.++|++|+++|++|++++|+++...   +.+...     .+.++.+|++|++++.++         
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~-----~~~~~~~D~~~~~~~~~~---------   64 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA-----GAQCIQADFSTNAGIMAF---------   64 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc-----CCEEEEcCCCCHHHHHHH---------
Confidence            689999999999999999999999999999999865432   222221     245667777777777766         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.++++++|++|||||.....+..
T Consensus        65 -----------------------------------------------------~~~~~~~~~~id~lv~~ag~~~~~~~~   91 (236)
T PRK06483         65 -----------------------------------------------------IDELKQHTDGLRAIIHNASDWLAEKPG   91 (236)
T ss_pred             -----------------------------------------------------HHHHHhhCCCccEEEECCccccCCCcC
Confidence                                                                 666666666677777777665444455


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc-CCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLARE-QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~-~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++++++|+.+++.+++.++|.|.+++ ..|+||++||.++..+.+++.+|++||
T Consensus        92 ~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asK  152 (236)
T PRK06483         92 APLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASK  152 (236)
T ss_pred             ccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHH
Confidence            677899999999999999999999999997653 147999999999998989999999987

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=2.5e-24  Score=186.20  Aligned_cols=156  Identities=23%  Similarity=0.291  Sum_probs=127.3

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      |.+|+++||||++|||.+++++|+++|++|++. .|+.+..+++.+++...   +.+..++.+|++|++++.++      
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~------   72 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL---GRKALAVKANVGDVEKIKEM------   72 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHH------
Confidence            467999999999999999999999999998764 67766666555555433   24566777777777777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+.++++|++|||||.....
T Consensus        73 --------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~   96 (250)
T PRK08063         73 --------------------------------------------------------FAQIDEEFGRLDVFVNNAASGVLR   96 (250)
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666666666677777777766666


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.+..+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK  158 (250)
T PRK08063         97 PAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRYLENYTTVGVSK  158 (250)
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCccHHHHHH
Confidence            778888999999999999999999999999998765 68999999998888888889999987

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.1e-24  Score=187.34  Aligned_cols=160  Identities=28%  Similarity=0.316  Sum_probs=128.4

Q ss_pred             hhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          37 INKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        37 ~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      +.++++++.||+++||||++|||.++|++|+++|++|++++|+.+.. +....+   .  ..+..++++|+++++++.++
T Consensus         6 ~~~~~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~---~--~~~~~~~~~Dl~~~~~~~~~   79 (255)
T PRK06841          6 QFDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQL---L--GGNAKGLVCDVSDSQSVEAA   79 (255)
T ss_pred             cchhhcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh---h--CCceEEEEecCCCHHHHHHH
Confidence            34455678999999999999999999999999999999999976432 221111   1  13445666666666666666


Q ss_pred             HHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecc
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA  196 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnA  196 (265)
                                                                                    ++++.++++++|++||||
T Consensus        80 --------------------------------------------------------------~~~~~~~~~~~d~vi~~a   97 (255)
T PRK06841         80 --------------------------------------------------------------VAAVISAFGRIDILVNSA   97 (255)
T ss_pred             --------------------------------------------------------------HHHHHHHhCCCCEEEECC
Confidence                                                                          666666677777777777


Q ss_pred             cccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         197 GRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       197 G~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |.....++.+.+.++|++.+++|+.+++++++.+.|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus        98 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  165 (255)
T PRK06841         98 GVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVALERHVAYCASK  165 (255)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCCCCCchHHHHH
Confidence            776666777788899999999999999999999999998765 68999999999999999999999987

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.7e-24  Score=186.73  Aligned_cols=155  Identities=22%  Similarity=0.213  Sum_probs=119.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCc-HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSN-LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++|+++||||++|||+++|++|+++| ++|++++|+++. ++++.+++...+  ..++.++++|++|++++.++++.+.+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG--ASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC--CCceEEEEecCCChHHHHHHHHHHHh
Confidence            47899999999999999999999985 999999999886 777766665533  23678888999888888877555443


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                       .|++|++|||||                                                              .....
T Consensus        85 -~g~id~li~~ag--------------------------------------------------------------~~~~~  101 (253)
T PRK07904         85 -GGDVDVAIVAFG--------------------------------------------------------------LLGDA  101 (253)
T ss_pred             -cCCCCEEEEeee--------------------------------------------------------------cCCch
Confidence             244555555554                                                              43221


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .-...++++.++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       102 ~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~~~~~~Y~~sK  163 (253)
T PRK07904        102 EELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVRRSNFVYGSTK  163 (253)
T ss_pred             hhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCCCCcchHHHH
Confidence            111123455678999999999999999999998876 79999999999988888889999987

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.6e-24  Score=183.81  Aligned_cols=160  Identities=21%  Similarity=0.327  Sum_probs=130.9

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCC--hHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ--TKYHRRCFD  118 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~  118 (265)
                      |.+|++|+++||||++|||.+++++|+++|++|++++|+++..++..+++.+.+  ..+...+++|+++  .+++.++  
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~--   76 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG--HPEPFAIRFDLMSAEEKEFEQF--   76 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC--CCCcceEEeeecccchHHHHHH--
Confidence            456889999999999999999999999999999999999887777666655433  2345667788875  3455666  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc-ccccEEEeccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAG  197 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~-g~ldilVnnAG  197 (265)
                                                                                  ++++.+.+ +++|++|||||
T Consensus        77 ------------------------------------------------------------~~~i~~~~~~~id~vi~~ag   96 (239)
T PRK08703         77 ------------------------------------------------------------AATIAEATQGKLDGIVHCAG   96 (239)
T ss_pred             ------------------------------------------------------------HHHHHHHhCCCCCEEEEecc
Confidence                                                                        55555555 56777777777


Q ss_pred             ccc-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQ-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ... ..++.+.+.++|++.+++|+.|++.+++.++|.|.+.+ .|+++++||..+..+.+++.+|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK  164 (239)
T PRK08703         97 YFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETPKAYWGGFGASK  164 (239)
T ss_pred             ccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccCCCCccchHHhH
Confidence            643 35678889999999999999999999999999998765 68999999999999999999999997

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.7e-24  Score=188.21  Aligned_cols=155  Identities=28%  Similarity=0.405  Sum_probs=126.6

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||.+++++|+++|++|++++|+++.+++..+++...+  .....++.+|+++++++.++          
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~----------   68 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG--GTVPEHRALDISDYDAVAAF----------   68 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEeeCCCHHHHHHH----------
Confidence            479999999999999999999999999999998776666655554332  12234456777777666666          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++++.++++++|++|||||....+++.+
T Consensus        69 ----------------------------------------------------~~~~~~~~~~id~lv~~ag~~~~~~~~~   96 (272)
T PRK07832         69 ----------------------------------------------------AADIHAAHGSMDVVMNIAGISAWGTVDR   96 (272)
T ss_pred             ----------------------------------------------------HHHHHHhcCCCCEEEECCCCCCCCcccc
Confidence                                                                6666666777788888887766667788


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.++|++.+++|+.|++.+++.++|.|.+++..|+||++||.++..+.|+...|++||
T Consensus        97 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  155 (272)
T PRK07832         97 LTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASK  155 (272)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHH
Confidence            99999999999999999999999999997654358999999999988999999999987

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.9e-24  Score=189.47  Aligned_cols=147  Identities=33%  Similarity=0.507  Sum_probs=124.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .+++++||||++|||.+++++|+++|++|++++|+++..+.           ..++.++++|++|+++++++        
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~--------   63 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-----------IPGVELLELDVTDDASVQAA--------   63 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----------cCCCeeEEeecCCHHHHHHH--------
Confidence            46899999999999999999999999999999997644321           12455667777777766666        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++.+.+++|++|++|||||....+++
T Consensus        64 ------------------------------------------------------~~~~~~~~g~~d~li~~ag~~~~~~~   89 (270)
T PRK06179         64 ------------------------------------------------------VDEVIARAGRIDVLVNNAGVGLAGAA   89 (270)
T ss_pred             ------------------------------------------------------HHHHHHhCCCCCEEEECCCCCCCcCc
Confidence                                                                  67777777778888888887767778


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+++++++++|+.|++++++.++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus        90 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  149 (270)
T PRK06179         90 EESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAPYMALYAASK  149 (270)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCCCccHHHHHH
Confidence            8889999999999999999999999999998765 79999999999999999999999987

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.92  E-value=5.2e-24  Score=184.05  Aligned_cols=158  Identities=27%  Similarity=0.443  Sum_probs=126.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec-CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR-SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++++|+++||||++|||.+++++|+++|++|++..+ +++..++..+.+..   .+.++.++++|+++++++.++    
T Consensus         2 ~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~----   74 (247)
T PRK12935          2 VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGK---EGHDVYAVQADVSKVEDANRL----   74 (247)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHH----
Confidence            3467999999999999999999999999999987654 33444443333322   234566677777777666666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.++++|++|||||...
T Consensus        75 ----------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~   96 (247)
T PRK12935         75 ----------------------------------------------------------VEEAVNHFGKVDILVNNAGITR   96 (247)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666667777777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.+++++.+++|+.+++++++.++|.|.+++ .|++|++||.++..+.++++.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  160 (247)
T PRK12935         97 DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGFGQTNYSAAK  160 (247)
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCCCCCCcchHHHH
Confidence            66677888899999999999999999999999998765 68999999999999889999999987

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=5.9e-24  Score=184.97  Aligned_cols=159  Identities=24%  Similarity=0.380  Sum_probs=132.8

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |.++++|+++||||++|||.+++++|+++|++|++++|+++..++..+.+...+   .++.++++|++++++++++    
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~----   74 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG---GKAIGVAMDVTNEDAVNAG----   74 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcC---ceEEEEECCCCCHHHHHHH----
Confidence            346789999999999999999999999999999999999887777776665432   4567778888888777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.++++|++|||||...
T Consensus        75 ----------------------------------------------------------~~~~~~~~~~~d~vi~~ag~~~   96 (262)
T PRK13394         75 ----------------------------------------------------------IDKVAERFGSVDILVSNAGIQI   96 (262)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCccCC
Confidence                                                                      6666666677777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHh-hhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYF-LAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l-~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..+..+.+.++|++.+++|+.+++.+++.++|.| .+++ .|+||++||..+..+.+....|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~y~~sk  161 (262)
T PRK13394         97 VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEASPLKSAYVTAK  161 (262)
T ss_pred             CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCCCCCcccHHHH
Confidence            6667778889999999999999999999999999 5443 68999999999988888889999887

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.9e-24  Score=193.38  Aligned_cols=160  Identities=23%  Similarity=0.242  Sum_probs=122.6

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+.+++||+++||||++|||.++|++|+++|++|++++|+.+..+++.+.+.+.. .+.++.++.+|++|.++++++   
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~v~~~---   85 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAAT-PGADVTLQELDLTSLASVRAA---   85 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-CCCceEEEECCCCCHHHHHHH---
Confidence            4567899999999999999999999999999999999998877766655554321 124566777888887777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.++++++|++|||||..
T Consensus        86 -----------------------------------------------------------~~~~~~~~~~iD~li~nAg~~  106 (306)
T PRK06197         86 -----------------------------------------------------------ADALRAAYPRIDLLINNAGVM  106 (306)
T ss_pred             -----------------------------------------------------------HHHHHhhCCCCCEEEECCccc
Confidence                                                                       555555555666666666654


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-------------CCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-------------GAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-------------~~~~~~~Y~asK  265 (265)
                      ...  .+.+.++++..+++|+.|++.+++.++|.|++++ .++||++||.++..             +.++...|++||
T Consensus       107 ~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK  182 (306)
T PRK06197        107 YTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSK  182 (306)
T ss_pred             cCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHH
Confidence            322  3456788999999999999999999999998765 68999999987654             233456788887

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.1e-24  Score=185.43  Aligned_cols=157  Identities=25%  Similarity=0.363  Sum_probs=125.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+.+|+++||||++|||.+++++|+++|++|++++|+++ .++..+.+...   +.++.++.+|++++++++++     
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~-----   72 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR---GHRCTAVVADVRDPASVAAA-----   72 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh---CCceEEEECCCCCHHHHHHH-----
Confidence            4578999999999999999999999999999999999764 33332322221   23455666666666666666     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.++++++|++|||||....
T Consensus        73 ---------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~   95 (263)
T PRK08226         73 ---------------------------------------------------------IKRAKEKEGRIDILVNNAGVCRL   95 (263)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCC
Confidence                                                                     77777777788888888887766


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-cCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-VGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+. .+.+++..|+++|
T Consensus        96 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~Y~~sK  159 (263)
T PRK08226         96 GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVADPGETAYALTK  159 (263)
T ss_pred             CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccCCCCcchHHHHH
Confidence            7778888899999999999999999999999987654 6899999998884 5678889999887

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4e-24  Score=188.25  Aligned_cols=153  Identities=30%  Similarity=0.463  Sum_probs=128.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |.+|+++||||++|||..++++|+++|++|++++|+++.++++.+..      +.++..+++|++|++++.++       
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~-------   67 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY------GDRLLPLALDVTDRAAVFAA-------   67 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------cCCeeEEEccCCCHHHHHHH-------
Confidence            35789999999999999999999999999999999876655443321      23466677777777777666       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++.+.+.++++|++|||||....++
T Consensus        68 -------------------------------------------------------~~~~~~~~~~~d~vi~~ag~~~~~~   92 (275)
T PRK08263         68 -------------------------------------------------------VETAVEHFGRLDIVVNNAGYGLFGM   92 (275)
T ss_pred             -------------------------------------------------------HHHHHHHcCCCCEEEECCCCccccc
Confidence                                                                   6666667777888888888777778


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++.+++|+.+++++++.++|.|++++ .|++|++||.++..+.++.+.|++||
T Consensus        93 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK  153 (275)
T PRK08263         93 IEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFPMSGIYHASK  153 (275)
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCCCccHHHHHH
Confidence            88899999999999999999999999999998765 68999999999999999999999987

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.3e-24  Score=186.05  Aligned_cols=148  Identities=25%  Similarity=0.377  Sum_probs=119.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||.+++++|+++|++|++++|+++..            ...++.++.+|++|++++.++      
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------------~~~~~~~~~~D~~~~~~~~~~------   67 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------------LPEGVEFVAADLTTAEGCAAV------   67 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------------cCCceeEEecCCCCHHHHHHH------
Confidence            68899999999999999999999999999999999975421            123566777788877777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc--c
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS--Q  200 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~--~  200 (265)
                                                                              ++++.+.++++|++|||||..  .
T Consensus        68 --------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~   91 (260)
T PRK06523         68 --------------------------------------------------------ARAVLERLGGVDILVHVLGGSSAP   91 (260)
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCcccccC
Confidence                                                                    555555556666666666643  2


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC-CCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP-YSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~-~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+.+ +...|++||
T Consensus        92 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~~Y~~sK  156 (260)
T PRK06523         92 AGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLPESTTAYAAAK  156 (260)
T ss_pred             CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCCcchhHHHH
Confidence            34567788899999999999999999999999998765 68999999999988865 788999987

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.1e-24  Score=183.30  Aligned_cols=156  Identities=28%  Similarity=0.370  Sum_probs=125.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||++|||.+++++|+++|++|++++|++++++++.+.+.+.. .+.++.++++|+++++++.++         
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~---------   71 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARY-PGIKVAVAALDVNDHDQVFEV---------   71 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC-CCceEEEEEcCCCCHHHHHHH---------
Confidence            6899999999999999999999999999999999877776655544321 134566677777777766666         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.++++++|++|||||+....++.
T Consensus        72 -----------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~   98 (248)
T PRK08251         72 -----------------------------------------------------FAEFRDELGGLDRVIVNAGIGKGARLG   98 (248)
T ss_pred             -----------------------------------------------------HHHHHHHcCCCCEEEECCCcCCCCCcC
Confidence                                                                 666666666677777777766666666


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCC-CCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY-SGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~-~~~Y~asK  265 (265)
                      +.+.+.+++.+++|+.+++++++.+.|.|++++ .++||++||.++..+.|+ ...|++||
T Consensus        99 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK  158 (248)
T PRK08251         99 TGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPGVKAAYAASK  158 (248)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCCCCcccHHHHH
Confidence            777889999999999999999999999998765 689999999999888885 68899887

>TIGR02415 23BDH acetoin reductases

Probab=99.92  E-value=6.9e-24  Score=183.89  Aligned_cols=154  Identities=27%  Similarity=0.394  Sum_probs=128.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||.+++++|++.|++|++++|+.+.+++..+++...   +.++..+.+|++|++++.++          
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~i~~~----------   67 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA---GGKAVAYKLDVSDKDQVFSA----------   67 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHH----------
Confidence            68999999999999999999999999999999876666655555433   24566677777777776666          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++++.++++++|++|||||.....++.+
T Consensus        68 ----------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~~   95 (254)
T TIGR02415        68 ----------------------------------------------------IDQAAEKFGGFDVMVNNAGVAPITPILE   95 (254)
T ss_pred             ----------------------------------------------------HHHHHHHcCCCCEEEECCCcCCCCCccc
Confidence                                                                6666666677777777777766667788


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.++|++.+++|+.+++++++.++|.|.+++.+|++|++||.++..+.+.++.|++||
T Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  154 (254)
T TIGR02415        96 ITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTK  154 (254)
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHH
Confidence            89999999999999999999999999998876458999999999999999999999987

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.2e-24  Score=185.34  Aligned_cols=155  Identities=25%  Similarity=0.314  Sum_probs=124.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+|+||+++||||++|||.++|++|+++|++|++++|+++.. +..+.+...+   .++.++++|+++++++.++     
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~-----   73 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQ---PRAEFVQVDLTDDAQCRDA-----   73 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcC---CceEEEEccCCCHHHHHHH-----
Confidence            358899999999999999999999999999999999987765 4444443332   4567777777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.++++++|++|||||....
T Consensus        74 ---------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~   96 (258)
T PRK08628         74 ---------------------------------------------------------VEQTVAKFGRIDGLVNNAGVNDG   96 (258)
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCCEEEECCcccCC
Confidence                                                                     66666666667777777775444


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..+++.+ ++|++.+++|+.+++++++.+.|.|.++  .|+|+++||.++..+.++++.|++||
T Consensus        97 ~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (258)
T PRK08628         97 VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKTALTGQGGTSGYAAAK  157 (258)
T ss_pred             CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCHHhccCCCCCchhHHHH
Confidence            4455555 8999999999999999999999998754  48999999999999989999999987

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.7e-24  Score=183.57  Aligned_cols=156  Identities=26%  Similarity=0.325  Sum_probs=130.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||.+++++|+++|++|++++|+.+..++..+.+.    .+.++..+++|++|+++++++      
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~------   71 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA----AGGRAFARQGDVGSAEAVEAL------   71 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHH------
Confidence            3679999999999999999999999999999999998776665554433    124566677777777776666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.++++++|++|||+|.....
T Consensus        72 --------------------------------------------------------~~~i~~~~~~id~vi~~ag~~~~~   95 (252)
T PRK06138         72 --------------------------------------------------------VDFVAARWGRLDVLVNNAGFGCGG   95 (252)
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    677777777777788887776666


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.+++++.+++|+.+++.+++.++|.|++++ .|+|+++||..+..+.++.+.|+++|
T Consensus        96 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK  157 (252)
T PRK06138         96 TVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGRGRAAYVASK  157 (252)
T ss_pred             CcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCCccHHHHHH
Confidence            777888999999999999999999999999998765 68999999999998888999999987

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.91  E-value=5.7e-24  Score=186.05  Aligned_cols=157  Identities=24%  Similarity=0.335  Sum_probs=122.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+            ..++.++++|++|+++++++++.+.+
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------------HENYQFVPTDVSSAEEVNHTVAEIIE   73 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999998775432            13566788888888888888666666


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                      .+|++|++|||||+.....+.+                                                     ...+.
T Consensus        74 ~~g~id~li~~Ag~~~~~~~~~-----------------------------------------------------~~~~~  100 (266)
T PRK06171         74 KFGRIDGLVNNAGINIPRLLVD-----------------------------------------------------EKDPA  100 (266)
T ss_pred             HcCCCCEEEECCcccCCccccc-----------------------------------------------------ccccc
Confidence            6666666666666321110000                                                     00012


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +..+.+.++|++++++|+.+++++++++.|+|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (266)
T PRK06171        101 GKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGSEGQSCYAATK  162 (266)
T ss_pred             ccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCCchhHHHH
Confidence            345678899999999999999999999999998765 68999999999999999999999987

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=8.5e-24  Score=182.00  Aligned_cols=159  Identities=28%  Similarity=0.400  Sum_probs=131.8

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |.++.+++++||||++|||.+++++|+++|++|++++|+.+..++..+.+...   +.++.++.+|+++++++.++    
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~----   74 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY---GVKVVIATADVSDYEEVTAA----   74 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---CCeEEEEECCCCCHHHHHHH----
Confidence            34577899999999999999999999999999999999887666655554332   24666677777777777666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||...
T Consensus        75 ----------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~   96 (239)
T PRK07666         75 ----------------------------------------------------------IEQLKNELGSIDILINNAGISK   96 (239)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCccEEEEcCcccc
Confidence                                                                      6666667777788888877766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .+++|++||.++..+.++...|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK  160 (239)
T PRK07666         97 FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGAAVTSAYSASK  160 (239)
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCCCCCcchHHHH
Confidence            66677888899999999999999999999999998765 68999999999999989989999886

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8e-24  Score=182.73  Aligned_cols=159  Identities=24%  Similarity=0.357  Sum_probs=132.6

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |..+++|+++||||++|||.+++++|+++|++|++++|+++.+++..+.+...+   .++.++++|++|++++.++    
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~----   74 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG---GRAHAIAADLADPASVQRF----   74 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHH----
Confidence            355789999999999999999999999999999999998877776665554332   4577777888887777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.++++|++|||+|...
T Consensus        75 ----------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~   96 (250)
T PRK12939         75 ----------------------------------------------------------FDAAAAALGGLDGLVNNAGITN   96 (250)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666666677777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .|++|++||.++..+.+..+.|+++|
T Consensus        97 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~y~~sK  160 (250)
T PRK12939         97 SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALWGAPKLGAYVASK  160 (250)
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhccCCCCcchHHHHH
Confidence            66777888899999999999999999999999998765 68999999999999989889999886

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.91  E-value=9.1e-24  Score=181.84  Aligned_cols=156  Identities=22%  Similarity=0.319  Sum_probs=128.3

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |.++++|+++||||++|||.+++++|+++|+.|++.+|+.+.+++..+..      +.++.++.+|+++.++++++    
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~----   70 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL------GERVKIFPANLSDRDEVKAL----   70 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCceEEEEccCCCHHHHHHH----
Confidence            45678999999999999999999999999999999888776655443321      13566677788877777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.++++|++|||||...
T Consensus        71 ----------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~   92 (245)
T PRK12936         71 ----------------------------------------------------------GQKAEADLEGVDILVNNAGITK   92 (245)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666666677777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++++++++.|.|.+++ .|++|++||.++..+.|+.+.|+++|
T Consensus        93 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sk  156 (245)
T PRK12936         93 DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASK  156 (245)
T ss_pred             CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCCCCCcchHHHH
Confidence            66677788899999999999999999999999887654 68999999999999999999999886

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.91  E-value=8e-24  Score=190.66  Aligned_cols=146  Identities=21%  Similarity=0.151  Sum_probs=112.3

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |..+.+|+++||||++|||.+++++|+++|++|++++|+.+..+++.+++..   .+.++.++.+|++|.+++++++   
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~---   74 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI---PPDSYTIIHIDLGDLDSVRRFV---   74 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc---cCCceEEEEecCCCHHHHHHHH---
Confidence            3456799999999999999999999999999999999988777666555431   2346777888888888888774   


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                 +++.+..+++|++|||||+..
T Consensus        75 -----------------------------------------------------------~~~~~~~~~iD~li~nAg~~~   95 (322)
T PRK07453         75 -----------------------------------------------------------DDFRALGKPLDALVCNAAVYM   95 (322)
T ss_pred             -----------------------------------------------------------HHHHHhCCCccEEEECCcccC
Confidence                                                                       444444445555555555432


Q ss_pred             c-ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-CceEEEEccccc
Q psy9256         201 R-AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ-GGHLVVTSSIAG  251 (265)
Q Consensus       201 ~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-~g~IV~isS~ag  251 (265)
                      . .+..+.+.++|++.+++|+.|++.+++.++|.|++++. .++||++||.+.
T Consensus        96 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~  148 (322)
T PRK07453         96 PLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTA  148 (322)
T ss_pred             CCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEccccc
Confidence            2 22345688999999999999999999999999987652 269999999754

>PLN00015 protochlorophyllide reductase

Probab=99.91  E-value=3.4e-24  Score=192.13  Aligned_cols=138  Identities=25%  Similarity=0.237  Sum_probs=107.5

Q ss_pred             EEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCcc
Q psy9256          50 WITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  128 (265)
Q Consensus        50 lItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld  128 (265)
                      +||||++|||+++|++|+++| ++|++++|+.+..+++.+++.   ..+.++.++++|++|+++++++            
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~d~~~v~~~------------   65 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG---MPKDSYTVMHLDLASLDSVRQF------------   65 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc---CCCCeEEEEEecCCCHHHHHHH------------
Confidence            699999999999999999999 999999998776665554432   2234667778888888888877            


Q ss_pred             EEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc-cccccc
Q psy9256         129 ILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-AAWEDI  207 (265)
Q Consensus       129 ilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~-~~~~~~  207 (265)
                                                                        ++++.+.++++|+||||||+... .+..+.
T Consensus        66 --------------------------------------------------~~~~~~~~~~iD~lInnAG~~~~~~~~~~~   95 (308)
T PLN00015         66 --------------------------------------------------VDNFRRSGRPLDVLVCNAAVYLPTAKEPTF   95 (308)
T ss_pred             --------------------------------------------------HHHHHhcCCCCCEEEECCCcCCCCCCcCCC
Confidence                                                              55555455566666666665432 345678


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-CceEEEEcccccc
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQ-GGHLVVTSSIAGI  252 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-~g~IV~isS~ag~  252 (265)
                      +.++|+++|++|+.|++.+++.++|.|++++. +|+||++||.++.
T Consensus        96 ~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~  141 (308)
T PLN00015         96 TADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN  141 (308)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence            88999999999999999999999999986532 4899999998875

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.2e-24  Score=183.47  Aligned_cols=153  Identities=25%  Similarity=0.330  Sum_probs=124.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+++.+++..+++      +.++.++++|++|++++.++     
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~-----   70 (249)
T PRK06500          2 SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL------GESALVIRADAGDVAAQKAL-----   70 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh------CCceEEEEecCCCHHHHHHH-----
Confidence            4578999999999999999999999999999999999865554443322      23566777888877777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++.+.+.++++|++|||||....
T Consensus        71 ---------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~   93 (249)
T PRK06500         71 ---------------------------------------------------------AQALAEAFGRLDAVFINAGVAKF   93 (249)
T ss_pred             ---------------------------------------------------------HHHHHHHhCCCCEEEECCCCCCC
Confidence                                                                     55565666667777777776655


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++++++++.|.|.+   ++++|+++|.++..+.+..+.|++||
T Consensus        94 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~~~~~~~~~Y~~sK  154 (249)
T PRK06500         94 APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAHIGMPNSSVYAASK  154 (249)
T ss_pred             CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhccCCCCccHHHHHH
Confidence            66778899999999999999999999999999853   47899999999999999999999887

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.7e-24  Score=182.15  Aligned_cols=155  Identities=32%  Similarity=0.388  Sum_probs=128.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ++|+++||||++|||.+++++|+++|++|++++|+++..+++.+.+.+.   +.++.++.+|+++++++.++        
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~--------   73 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST---GVKAAAYSIDLSNPEAIAPG--------   73 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC---CCcEEEEEccCCCHHHHHHH--------
Confidence            4689999999999999999999999999999999887666655555432   24677777888887777777        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++++.++++++|++|||||.....++
T Consensus        74 ------------------------------------------------------~~~~~~~~~~id~lv~~ag~~~~~~~   99 (241)
T PRK07454         74 ------------------------------------------------------IAELLEQFGCPDVLINNAGMAYTGPL   99 (241)
T ss_pred             ------------------------------------------------------HHHHHHHcCCCCEEEECCCccCCCch
Confidence                                                                  66666666667777777776655667


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++ .|++|++||.++..+.++++.|++||
T Consensus       100 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (241)
T PRK07454        100 LEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFPQWGAYCVSK  159 (241)
T ss_pred             hhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCCCccHHHHHH
Confidence            7788899999999999999999999999998765 68999999999988888899999886

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.3e-23  Score=182.93  Aligned_cols=157  Identities=25%  Similarity=0.318  Sum_probs=123.4

Q ss_pred             ccCCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHH-----------HHHHHHHHhCCCCCcEEEEeecCCC
Q psy9256          43 YFNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLE-----------RVKNLCVQAGAHPQSIYTLTLDVTQ  109 (265)
Q Consensus        43 ~l~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~D~~~  109 (265)
                      ++++|+++||||++  |||.+++++|+++|++|++++|++...+           .+...+..                 
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----------------   64 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-----------------   64 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh-----------------
Confidence            46789999999994  9999999999999999999998732110           01111111                 


Q ss_pred             hHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccc
Q psy9256         110 TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  189 (265)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~l  189 (265)
                                                                      ...++..+.||++++++++++++++.+.++++
T Consensus        65 ------------------------------------------------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   96 (256)
T PRK12748         65 ------------------------------------------------YGVRCEHMEIDLSQPYAPNRVFYAVSERLGDP   96 (256)
T ss_pred             ------------------------------------------------cCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence                                                            11234455555555556666688888888888


Q ss_pred             cEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         190 DILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       190 dilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.++. .|++|++||.++..+.++...|++||
T Consensus        97 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK  171 (256)
T PRK12748         97 SILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLTSGQSLGPMPDELAYAATK  171 (256)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEECCccccCCCCCchHHHHHH
Confidence            8888888877667788889999999999999999999999999997654 68999999999988888899999987

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1e-23  Score=184.25  Aligned_cols=155  Identities=30%  Similarity=0.393  Sum_probs=129.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++++++||||++|||.+++++|+++|++|++++|+++.++++..++ .   .+.++.++.+|++|++++.++      
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~---~~~~~~~~~~D~~d~~~~~~~------   71 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P---YPGRHRWVVADLTSEAGREAV------   71 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h---cCCceEEEEccCCCHHHHHHH------
Confidence            457899999999999999999999999999999999877766655544 1   234677777788877777776      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++.+.+ ++++|++|||||.....
T Consensus        72 --------------------------------------------------------~~~~~~-~~~id~lv~~ag~~~~~   94 (263)
T PRK09072         72 --------------------------------------------------------LARARE-MGGINVLINNAGVNHFA   94 (263)
T ss_pred             --------------------------------------------------------HHHHHh-cCCCCEEEECCCCCCcc
Confidence                                                                    555544 56777778877776666


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.+++++.+++|+.|++.+++.+.|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus        95 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  156 (263)
T PRK09072         95 LLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIGYPGYASYCASK  156 (263)
T ss_pred             ccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcCCCCccHHHHHH
Confidence            778889999999999999999999999999998765 68999999999999999999999887

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-23  Score=181.45  Aligned_cols=156  Identities=28%  Similarity=0.417  Sum_probs=132.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +++|+++||||+++||.+++++|+++|++|++++|+++..++...++...   +.++..+.+|++++++++++       
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~-------   71 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA---GGKAIGVAMDVTDEEAINAG-------   71 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHH-------
Confidence            56899999999999999999999999999999999988777666555432   34666777777777777766       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.++++++|++|||||.....+
T Consensus        72 -------------------------------------------------------~~~~~~~~~~~d~vi~~a~~~~~~~   96 (258)
T PRK12429         72 -------------------------------------------------------IDYAVETFGGVDILVNNAGIQHVAP   96 (258)
T ss_pred             -------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCC
Confidence                                                                   6666666777788888887776677


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.+++++.+++|+.+++.+++.++|.|.+++ .+++|++||.++..+.++.+.|+++|
T Consensus        97 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~~k  157 (258)
T PRK12429         97 IEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSAGKAAYVSAK  157 (258)
T ss_pred             hhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCcchhHHHH
Confidence            77888899999999999999999999999998765 78999999999999999999999886

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.91  E-value=1.3e-23  Score=183.05  Aligned_cols=159  Identities=25%  Similarity=0.260  Sum_probs=120.4

Q ss_pred             EEEEcCCCCchhHHHHHHHHH----cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSK----CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +++||||++|||+++|++|++    +|++|++++|+++.++++.+++.... .+.++.++.+|++|+++++++++.+.+.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAER-SGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcC-CCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    79999999999888887776665421 2346777888888888888774444433


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc--
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR--  201 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~--  201 (265)
                      +|+.+                                                         + ..|++|||||....  
T Consensus        81 ~g~~~---------------------------------------------------------~-~~~~lv~nAG~~~~~~  102 (256)
T TIGR01500        81 PRPKG---------------------------------------------------------L-QRLLLINNAGTLGDVS  102 (256)
T ss_pred             cccCC---------------------------------------------------------C-ceEEEEeCCcccCccc
Confidence            33210                                                         0 12466666665322  


Q ss_pred             cccccc-chHHHHhhhhhhhhHHHHHHHHHHHHhhhhc-CCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDI-ELEVDRELFELNVFSVLSLSRIATSYFLARE-QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~-~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....+. +.++|++.+++|+.|++++++.++|.|.+++ ..|+||++||.++..+.|++++|++||
T Consensus       103 ~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK  168 (256)
T TIGR01500       103 KGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGK  168 (256)
T ss_pred             cccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCchHHHHHH
Confidence            122333 4688999999999999999999999998653 248999999999999999999999987

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-23  Score=181.69  Aligned_cols=159  Identities=28%  Similarity=0.399  Sum_probs=131.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++.+|+++||||++|||.+++++|+++|++|++++|+++.++++...+....   .++.++.+|+++++++.++     
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~-----   76 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG---GAAHVVSLDVTDYQSIKAA-----   76 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHH-----
Confidence            45889999999999999999999999999999999999877776666554332   4567777888887777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.++++|++|||||....
T Consensus        77 ---------------------------------------------------------~~~~~~~~~~~d~li~~ag~~~~   99 (258)
T PRK06949         77 ---------------------------------------------------------VAHAETEAGTIDILVNNSGVSTT   99 (258)
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCCEEEECCCCCCC
Confidence                                                                     66666666777777777776656


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-------CceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ-------GGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-------~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++++++|+.+++.+++++.|.|.++..       .|++|++||..+..+.+..+.|+++|
T Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  170 (258)
T PRK06949        100 QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSK  170 (258)
T ss_pred             CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHHHHH
Confidence            66777788999999999999999999999999976542       47999999999988888889999887

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.4e-23  Score=181.22  Aligned_cols=160  Identities=26%  Similarity=0.355  Sum_probs=129.6

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      |..+++|+++||||++|||..++++|+++|++ |++++|+++..++....+...   +.++.++.+|+++++++.++   
T Consensus         1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~---   74 (260)
T PRK06198          1 MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL---GAKAVFVQADLSDVEDCRRV---   74 (260)
T ss_pred             CCCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHH---
Confidence            35678999999999999999999999999999 999999876666555444322   34566677777777777666   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++.+.++++++|++|||||..
T Consensus        75 -----------------------------------------------------------~~~~~~~~g~id~li~~ag~~   95 (260)
T PRK06198         75 -----------------------------------------------------------VAAADEAFGRLDALVNAAGLT   95 (260)
T ss_pred             -----------------------------------------------------------HHHHHHHhCCCCEEEECCCcC
Confidence                                                                       666666666677777777766


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++++++|+.+++.+++.++|.|.+++..|++|++||.++..+.++.+.|+++|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  161 (260)
T PRK06198         96 DRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASK  161 (260)
T ss_pred             CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHH
Confidence            556667788999999999999999999999999997764358999999999988888899999987

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.91  E-value=1.6e-23  Score=183.62  Aligned_cols=155  Identities=20%  Similarity=0.138  Sum_probs=113.6

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHH----HHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHR----RCFDAVI  121 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~~~~~  121 (265)
                      ++++||||++|||++++++|+++|++|++++|+ ++.++++.+.+...  .+.+..++++|++|++++.    ++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNAR--RPNSAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhc--cCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            689999999999999999999999999998764 45555554444322  1346777899999988654    4433333


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                      +.+|++|++|||||                                                              ...+
T Consensus        80 ~~~g~iD~lv~nAG--------------------------------------------------------------~~~~   97 (267)
T TIGR02685        80 RAFGRCDVLVNNAS--------------------------------------------------------------AFYP   97 (267)
T ss_pred             HccCCceEEEECCc--------------------------------------------------------------cCCC
Confidence            44455555555555                                                              3322


Q ss_pred             cccccc-----------chHHHHhhhhhhhhHHHHHHHHHHHHhhhhc-----CCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDI-----------ELEVDRELFELNVFSVLSLSRIATSYFLARE-----QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~-----------~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~-----~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.           ..++|++++++|+.++++++++++|.|+.+.     ..++|++++|..+..+.+++++|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~~~~~~~Y~asK  177 (267)
T TIGR02685        98 TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAK  177 (267)
T ss_pred             CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCCCcccchhHHHH
Confidence            222222           2246999999999999999999999996431     247899999999999999999999998

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.6e-23  Score=182.59  Aligned_cols=151  Identities=31%  Similarity=0.397  Sum_probs=126.5

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||.+++++|+++|++|++++|+.+.++++.+.+.     +.++.++++|+++++++.++          
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~----------   66 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-----AGNAWTGALDVTDRAAWDAA----------   66 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHH----------
Confidence            689999999999999999999999999999998876666544332     24577778888887777766          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhh-cccccEEEeccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQ-FGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~-~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                          ++.+.++ ++++|++|||||....+++.
T Consensus        67 ----------------------------------------------------~~~~~~~~~~~id~vi~~ag~~~~~~~~   94 (260)
T PRK08267         67 ----------------------------------------------------LADFAAATGGRLDVLFNNAGILRGGPFE   94 (260)
T ss_pred             ----------------------------------------------------HHHHHHHcCCCCCEEEECCCCCCCCccc
Confidence                                                                5555544 56777777777776667778


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+++++.+++|+.+++++++.+.|.|++++ .|+||++||.++..+.++...|++||
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  153 (260)
T PRK08267         95 DIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQPGLAVYSATK  153 (260)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCCchhhHHHH
Confidence            888999999999999999999999999998765 69999999999999999999999887

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-23  Score=181.87  Aligned_cols=157  Identities=18%  Similarity=0.128  Sum_probs=124.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ...+|+++||||++|||.+++++|++.|++|+++.++ .+..+++.+.+...   +.++.++.+|++|++++.++     
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~-----   77 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL---GRRAVALQADLADEAEVRAL-----   77 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHH-----
Confidence            4568999999999999999999999999999887764 34444444444332   24566777777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.++++|++|||||....
T Consensus        78 ---------------------------------------------------------~~~~~~~~~~iD~vi~~ag~~~~  100 (258)
T PRK09134         78 ---------------------------------------------------------VARASAALGPITLLVNNASLFEY  100 (258)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCcCCCC
Confidence                                                                     56665566667777777776666


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++.+++++.|.|.++. .|+||+++|..+..+.|++..|++||
T Consensus       101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~~s~~~~~~~p~~~~Y~~sK  163 (258)
T PRK09134        101 DSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-RGLVVNMIDQRVWNLNPDFLSYTLSK  163 (258)
T ss_pred             CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECchhhcCCCCCchHHHHHH
Confidence            6677888899999999999999999999999998764 68999999988877788888999987

>PRK09186 flagellin modification protein A; Provisional

Probab=99.91  E-value=2.8e-23  Score=180.29  Aligned_cols=158  Identities=23%  Similarity=0.287  Sum_probs=120.2

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +++|+++||||++|||+++|++|+++|++|++++|+++.++++.+.+..... ...+.++++|++|++++.++++.+   
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFK-SKKLSLVELDITDQESLEEFLSKS---   77 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcC-CCceeEEEecCCCHHHHHHHHHHH---
Confidence            5689999999999999999999999999999999998887777666543211 124555678888888877774444   


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc---c
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS---Q  200 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~---~  200 (265)
                                                                                 .+.++++|++|||||..   .
T Consensus        78 -----------------------------------------------------------~~~~~~id~vi~~A~~~~~~~   98 (256)
T PRK09186         78 -----------------------------------------------------------AEKYGKIDGAVNCAYPRNKDY   98 (256)
T ss_pred             -----------------------------------------------------------HHHcCCccEEEECCccccccc
Confidence                                                                       44445555555555432   1


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC----------CCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----------YSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~----------~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||.++..+..          ....|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK  172 (256)
T PRK09186         99 GKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIK  172 (256)
T ss_pred             cCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhccccccCCcchhHHHH
Confidence            34567888999999999999999999999999998765 68999999988764321          123698887

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.5e-23  Score=184.37  Aligned_cols=146  Identities=32%  Similarity=0.468  Sum_probs=120.9

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||.+++++|+++|++|++++|+.+.++.+.+         ....++.+|+++++++.++          
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---------~~~~~~~~Dl~~~~~~~~~----------   62 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA---------AGFTAVQLDVNDGAALARL----------   62 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---------CCCeEEEeeCCCHHHHHHH----------
Confidence            689999999999999999999999999999998755443321         1245667777777777766          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++.+.+.++++|++|||||....+++.+
T Consensus        63 ----------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~~   90 (274)
T PRK05693         63 ----------------------------------------------------AEELEAEHGGLDVLINNAGYGAMGPLLD   90 (274)
T ss_pred             ----------------------------------------------------HHHHHHhcCCCCEEEECCCCCCCCCccc
Confidence                                                                6666666677777777777766667778


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.++|++.+++|+.|++.++++++|.|.+.  .|+||++||.++..+.++.+.|++||
T Consensus        91 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK  147 (274)
T PRK05693         91 GGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGVLVTPFAGAYCASK  147 (274)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCccccCCCCCccHHHHHH
Confidence            8899999999999999999999999999753  48999999999999999999999987

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.91  E-value=3.1e-23  Score=178.56  Aligned_cols=154  Identities=23%  Similarity=0.339  Sum_probs=125.1

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||.++|++|+++|++|++++|+..  +...+........+.++.++++|+++++++.++          
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~----------   70 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN--DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEA----------   70 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH----------
Confidence            68999999999999999999999999999999854  223332222222234566666777776666666          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++.+.++++++|++|||+|.....++.+
T Consensus        71 ----------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~~   98 (245)
T PRK12824         71 ----------------------------------------------------LAEIEEEEGPVDILVNNAGITRDSVFKR   98 (245)
T ss_pred             ----------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCcccc
Confidence                                                                7777777778888888888776677788


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.++|++.+++|+.+++++++.++|.|.+++ .|++|++||..+..+.++.+.|++||
T Consensus        99 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~Y~~sK  156 (245)
T PRK12824         99 MSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQFGQTNYSAAK  156 (245)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCCCChHHHHHH
Confidence            89999999999999999999999999998665 68999999999999889999999987

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.91  E-value=2.2e-23  Score=180.14  Aligned_cols=156  Identities=22%  Similarity=0.298  Sum_probs=129.3

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +++|+++||||+++||.+++++|+++|++|++++|+.+..+++.+.+...   +.++.++++|+++.++++++       
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~-------   70 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK---GGNAQAFACDITDRDSVDTA-------   70 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHH-------
Confidence            46899999999999999999999999999999999887766665555433   24567777788777777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.++++++|++|||||.....+
T Consensus        71 -------------------------------------------------------~~~~~~~~~~~d~vi~~ag~~~~~~   95 (250)
T TIGR03206        71 -------------------------------------------------------VAAAEQALGPVDVLVNNAGWDKFGP   95 (250)
T ss_pred             -------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCC
Confidence                                                                   6666666666777777777655566


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++.+++|+.+++++++.+.|.|.+++ .+++|++||.++..+.++.+.|+++|
T Consensus        96 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~~~~~Y~~sK  156 (250)
T TIGR03206        96 FTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSGEAVYAACK  156 (250)
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCCCCchHHHHH
Confidence            77788899999999999999999999999997765 68999999999999999999999886

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06196 oxidoreductase; Provisional

Probab=99.90  E-value=1.2e-23  Score=188.98  Aligned_cols=152  Identities=22%  Similarity=0.198  Sum_probs=116.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++.||+++||||++|||.+++++|+++|++|++++|+++..+++.+.+.       ++.++++|++|.++++++     
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-------~v~~~~~Dl~d~~~v~~~-----   89 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-------GVEVVMLDLADLESVRAF-----   89 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-------hCeEEEccCCCHHHHHHH-----
Confidence            46789999999999999999999999999999999998776665544332       255677788877777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.++++++|++|||||....
T Consensus        90 ---------------------------------------------------------~~~~~~~~~~iD~li~nAg~~~~  112 (315)
T PRK06196         90 ---------------------------------------------------------AERFLDSGRRIDILINNAGVMAC  112 (315)
T ss_pred             ---------------------------------------------------------HHHHHhcCCCCCEEEECCCCCCC
Confidence                                                                     55555555566666666665322


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc------------CCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV------------GAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~------------~~~~~~~Y~asK  265 (265)
                        ..+.+.++|+..+++|+.|++++++.++|.|.+++ .++||++||.++..            +.+....|++||
T Consensus       113 --~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK  185 (315)
T PRK06196        113 --PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSK  185 (315)
T ss_pred             --CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHH
Confidence              13456678999999999999999999999998764 68999999986543            233456788876

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.7e-23  Score=178.91  Aligned_cols=156  Identities=28%  Similarity=0.385  Sum_probs=121.1

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |.++++|+++||||++|||.+++++|+++|++|++++|+++..+++.+.+...   +.+...+.+|++++++++++++.+
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~   77 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD---GGTAIAVQVDVSDPDSAKAMADAT   77 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999877666665554432   235667788888888888775555


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                      .+.++                                                              ++|++|||||...
T Consensus        78 ~~~~~--------------------------------------------------------------~id~vi~~ag~~~   95 (250)
T PRK07774         78 VSAFG--------------------------------------------------------------GIDYLVNNAAIYG   95 (250)
T ss_pred             HHHhC--------------------------------------------------------------CCCEEEECCCCcC
Confidence            44444                                                              4555555555432


Q ss_pred             ---cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 ---RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                         ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|++|++||.++..   +.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~---~~~~Y~~sK  159 (250)
T PRK07774         96 GMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAWL---YSNFYGLAK  159 (250)
T ss_pred             CCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEecccccC---CccccHHHH
Confidence               24556778899999999999999999999999998765 68999999987654   456798887

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=2.9e-23  Score=179.30  Aligned_cols=156  Identities=29%  Similarity=0.423  Sum_probs=127.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++.+++++||||++|||.+++++|+++|++|++++|+++..+++...+..    +.++.++.+|++|+++++++      
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~------   71 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA----GGRAIAVAADVSDEADVEAA------   71 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCeEEEEECCCCCHHHHHHH------
Confidence            46789999999999999999999999999999999998776665554332    24566777777777777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-c
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-R  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~  201 (265)
                                                                              ++++.++++++|++|||||... .
T Consensus        72 --------------------------------------------------------~~~~~~~~~~~d~vi~~ag~~~~~   95 (251)
T PRK07231         72 --------------------------------------------------------VAAALERFGSVDILVNNAGTTHRN   95 (251)
T ss_pred             --------------------------------------------------------HHHHHHHhCCCCEEEECCCCCCCC
Confidence                                                                    5666566666777777776643 3


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .+++|++||..+..+.++.+.|+.||
T Consensus        96 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (251)
T PRK07231         96 GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPRPGLGWYNASK  158 (251)
T ss_pred             CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCCCCchHHHHHH
Confidence            4577888999999999999999999999999998765 68999999999999999999999886

>KOG1207|consensus

Probab=99.90  E-value=2.4e-24  Score=173.32  Aligned_cols=152  Identities=25%  Similarity=0.339  Sum_probs=133.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++.|+.+++||++.|||++++..|++.|+.|+.+.|+++.++.+.++.      +.-+..+..|+++++...++     
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~------p~~I~Pi~~Dls~wea~~~~-----   71 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET------PSLIIPIVGDLSAWEALFKL-----   71 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC------CcceeeeEecccHHHHHHHh-----
Confidence            4678999999999999999999999999999999999998888776653      34477788899887654433     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                                   ....+++|.||||||+.-.
T Consensus        72 -------------------------------------------------------------l~~v~pidgLVNNAgvA~~   90 (245)
T KOG1207|consen   72 -------------------------------------------------------------LVPVFPIDGLVNNAGVATN   90 (245)
T ss_pred             -------------------------------------------------------------hcccCchhhhhccchhhhc
Confidence                                                                         3345789999999999999


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .|+++.+.+++++.|++|+.+++.++|.....+..++.+|.|||+||.++.++..+.++||++|
T Consensus        91 ~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatK  154 (245)
T KOG1207|consen   91 HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATK  154 (245)
T ss_pred             chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecH
Confidence            9999999999999999999999999999888887777789999999999999999999999998

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.90  E-value=3.7e-23  Score=179.13  Aligned_cols=153  Identities=31%  Similarity=0.438  Sum_probs=120.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc--HHHHHHHHHHhCCCC-CcEEEEeecCCC-hHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN--LERVKNLCVQAGAHP-QSIYTLTLDVTQ-TKYHRRCFD  118 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~  118 (265)
                      .+.+|+++||||++|||+++|++|+++|++|+++.|+.+.  .+.+.+... .  .. ....+..+|+++ +++++.+  
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~Dvs~~~~~v~~~--   76 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E--AGGGRAAAVAADVSDDEESVEAL--   76 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h--cCCCcEEEEEecCCCCHHHHHHH--
Confidence            4678999999999999999999999999999988887664  333333332 1  11 245556666665 6666666  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++.+.+.+|++|++|||||.
T Consensus        77 ------------------------------------------------------------~~~~~~~~g~id~lvnnAg~   96 (251)
T COG1028          77 ------------------------------------------------------------VAAAEEEFGRIDILVNNAGI   96 (251)
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCC
Confidence                                                                        66666666777777777777


Q ss_pred             ccc-ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCC-CccccCC
Q psy9256         199 SQR-AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS-GSYTDHL  265 (265)
Q Consensus       199 ~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~-~~Y~asK  265 (265)
                      ... .++.+.+.++|++++++|+.+++++++.+.|.|++   + +||++||.++. +.++. ++|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~-~Iv~isS~~~~-~~~~~~~~Y~~sK  160 (251)
T COG1028          97 AGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK---Q-RIVNISSVAGL-GGPPGQAAYAASK  160 (251)
T ss_pred             CCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh---C-eEEEECCchhc-CCCCCcchHHHHH
Confidence            666 47888888999999999999999999988888872   3 99999999999 87874 9999998

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.1e-23  Score=182.46  Aligned_cols=151  Identities=26%  Similarity=0.388  Sum_probs=124.8

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      .|+++||||++|||.+++++|+++|++|++++|+++.++++.+..      +.++.++++|++|.+++.++         
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~---------   66 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY------GDRLWVLQLDVTDSAAVRAV---------   66 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCceEEEEccCCCHHHHHHH---------
Confidence            478999999999999999999999999999999876554443321      23566677777777777776         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.+.++++|++|||||....++..
T Consensus        67 -----------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~   93 (276)
T PRK06482         67 -----------------------------------------------------VDRAFAALGRIDVVVSNAGYGLFGAAE   93 (276)
T ss_pred             -----------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCcccc
Confidence                                                                 666666667777777777777666777


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+++++.+++|+.+++++++.++|.|.+++ .++||++||.++..+.|+.+.|++||
T Consensus        94 ~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  152 (276)
T PRK06482         94 ELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAYPGFSLYHATK  152 (276)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCCCCCchhHHHH
Confidence            788899999999999999999999999997665 68999999999988889999999987

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.9e-23  Score=179.39  Aligned_cols=158  Identities=23%  Similarity=0.312  Sum_probs=115.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..+++|+++||||++|||.++|++|+++|++|++++++.+ ..+...+...+....+.++.++++|+++++++.++    
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~----   79 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKL----   79 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHH----
Confidence            4567899999999999999999999999999777765432 22222222222211124566677777777776666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||...
T Consensus        80 ----------------------------------------------------------~~~~~~~~~~id~li~~ag~~~  101 (257)
T PRK12744         80 ----------------------------------------------------------FDDAKAAFGRPDIAINTVGKVL  101 (257)
T ss_pred             ----------------------------------------------------------HHHHHHhhCCCCEEEECCcccC
Confidence                                                                      6666666666777777777665


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEE-cccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVT-SSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~i-sS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++.+++++.|.|.+   .|+++++ ||..+ .+.|+++.|++||
T Consensus       102 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~iv~~~ss~~~-~~~~~~~~Y~~sK  163 (257)
T PRK12744        102 KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTSLLG-AFTPFYSAYAGSK  163 (257)
T ss_pred             CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCEEEEecchhc-ccCCCcccchhhH
Confidence            566778888999999999999999999999999853   3677776 55444 3567889999998

>PRK07069 short chain dehydrogenase; Validated

Probab=99.90  E-value=5.7e-23  Score=177.68  Aligned_cols=153  Identities=27%  Similarity=0.373  Sum_probs=124.3

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      ++||||++|||.+++++|+++|++|++++|+ .+.++++.+.+.... .......+++|++|+++++++           
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~-----------   69 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAH-GEGVAFAAVQDVTDEAQWQAL-----------   69 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-CCceEEEEEeecCCHHHHHHH-----------
Confidence            7999999999999999999999999999998 555555555443321 112344567777777777777           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         ++++.++++++|++|||||.....++.+.
T Consensus        70 ---------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~~~   98 (251)
T PRK07069         70 ---------------------------------------------------LAQAADAMGGLSVLVNNAGVGSFGAIEQI   98 (251)
T ss_pred             ---------------------------------------------------HHHHHHHcCCccEEEECCCcCCCCChhhC
Confidence                                                               66666666777777777777666677788


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+++++++++|+.+++.+++.++|.|.+++ .|+||++||.++..+.++++.|+++|
T Consensus        99 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~Y~~sK  155 (251)
T PRK07069         99 ELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEPDYTAYNASK  155 (251)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCCCCchhHHHH
Confidence            8999999999999999999999999998765 68999999999999999999999987

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.2e-23  Score=182.56  Aligned_cols=157  Identities=25%  Similarity=0.381  Sum_probs=126.2

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..+++||+++||||++|||.+++++|+++|++|++++|+.+. .++..+.+..   .+.++.++.+|+++.+++.++   
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~---  114 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK---EGVKCLLIPGDVSDEAFCKDA---  114 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh---cCCeEEEEEccCCCHHHHHHH---
Confidence            467889999999999999999999999999999999997643 3333333322   234666777777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+.++++|++|||||..
T Consensus       115 -----------------------------------------------------------~~~i~~~~~~iD~lI~~Ag~~  135 (290)
T PRK06701        115 -----------------------------------------------------------VEETVRELGRLDILVNNAAFQ  135 (290)
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCccc
Confidence                                                                       666666666777777777765


Q ss_pred             c-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 Q-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      . ..++.+.+.++|++.+++|+.+++.+++++.|.|.+   .|+||++||.++..+.++...|++||
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~~~~~~~~~Y~~sK  199 (290)
T PRK06701        136 YPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGYEGNETLIDYSATK  199 (290)
T ss_pred             CCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEecccccCCCCCcchhHHHH
Confidence            3 356778889999999999999999999999999853   48999999999999989999999987

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=4.8e-23  Score=179.53  Aligned_cols=160  Identities=29%  Similarity=0.413  Sum_probs=126.6

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ...++++|+++||||++|||.++|++|+++|++|++++|+.++++.....+...   +.+..++++|++|+++++++   
T Consensus         6 ~~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~---~~~~~~~~~Dl~d~~~i~~~---   79 (259)
T PRK08213          6 ELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL---GIDALWIAADVADEADIERL---   79 (259)
T ss_pred             hhhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHH---
Confidence            345678999999999999999999999999999999999877666655554432   24566677777777777776   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+.++++|++|||||..
T Consensus        80 -----------------------------------------------------------~~~~~~~~~~id~vi~~ag~~  100 (259)
T PRK08213         80 -----------------------------------------------------------AEETLERFGHVDILVNNAGAT  100 (259)
T ss_pred             -----------------------------------------------------------HHHHHHHhCCCCEEEECCCCC
Confidence                                                                       666666666777777777765


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHH-hhhhcCCceEEEEcccccccCCCC----CCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSY-FLAREQGGHLVVTSSIAGIVGAPY----SGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~-l~~~~~~g~IV~isS~ag~~~~~~----~~~Y~asK  265 (265)
                      ...+..+.+.++|++.+++|+.+++.+++++.|. |.+++ .|++|++||.++..+.+.    ...|+++|
T Consensus       101 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sK  170 (259)
T PRK08213        101 WGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEVMDTIAYNTSK  170 (259)
T ss_pred             CCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCccccCcchHHHHH
Confidence            5566677888999999999999999999999998 65543 689999999887766544    37888876

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.7e-23  Score=180.57  Aligned_cols=157  Identities=32%  Similarity=0.490  Sum_probs=126.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |++|+++||||++|||.+++++|+++|++|++++|+++..++..++....+. ..++.++.+|++|              
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d--------------   65 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNL-QQNIKVQQLDVTD--------------   65 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCceeEEecCCCC--------------
Confidence            4679999999999999999999999999999999988777666554433221 1234444555555              


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                      ++++++ ++++.+.++++|++|||||....++
T Consensus        66 ------------------------------------------------~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~   96 (280)
T PRK06914         66 ------------------------------------------------QNSIHN-FQLVLKEIGRIDLLVNNAGYANGGF   96 (280)
T ss_pred             ------------------------------------------------HHHHHH-HHHHHHhcCCeeEEEECCcccccCc
Confidence                                                            444555 5556666777888888888777777


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..+.+.+++++.+++|+.+++.+++.++|.|++.+ .+++|++||.++..+.++.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK  157 (280)
T PRK06914         97 VEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFPGLSPYVSSK  157 (280)
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCCCCCchhHHhH
Confidence            88889999999999999999999999999998765 68999999999999999999999887

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.4e-23  Score=181.19  Aligned_cols=157  Identities=22%  Similarity=0.320  Sum_probs=127.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++.+|+++||||++|||.+++++|+++|++|++++|+.+.+++..+.+...+   .++.++.+|+++++++.++      
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~------   77 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADG---GEAVAFPLDVTDPDSVKSF------   77 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHH------
Confidence            4667899999999999999999999999999999998766655544443322   3566677777777777766      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+.++++|++|||||.....
T Consensus        78 --------------------------------------------------------~~~~~~~~~~id~vi~~Ag~~~~~  101 (274)
T PRK07775         78 --------------------------------------------------------VAQAEEALGEIEVLVSGAGDTYFG  101 (274)
T ss_pred             --------------------------------------------------------HHHHHHhcCCCCEEEECCCcCCCc
Confidence                                                                    666666666777777777766556


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +..+.++++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+.|+.+.|++||
T Consensus       102 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (274)
T PRK07775        102 KLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQRPHMGAYGAAK  163 (274)
T ss_pred             ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCCcchHHHHH
Confidence            666788899999999999999999999999998765 68999999999998888888999887

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.5e-23  Score=180.27  Aligned_cols=159  Identities=25%  Similarity=0.307  Sum_probs=127.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|++|+++||||++|||.+++++|+++|++|++++|+++..++..+.+..... ..++.++++|++|++++.++      
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~------   76 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG-AGAVRYEPADVTDEDQVARA------   76 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC-CCceEEEEcCCCCHHHHHHH------
Confidence            36789999999999999999999999999999999987766665555443321 24566677777777777766      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-c
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-R  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~  201 (265)
                                                                              ++++.++++++|++|||||... .
T Consensus        77 --------------------------------------------------------~~~~~~~~~~~d~li~~ag~~~~~  100 (276)
T PRK05875         77 --------------------------------------------------------VDAATAWHGRLHGVVHCAGGSETI  100 (276)
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCcccCC
Confidence                                                                    5555555666666666666542 3


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+|+++||.++..+.|..+.|++||
T Consensus       101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK  163 (276)
T PRK05875        101 GPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASNTHRWFGAYGVTK  163 (276)
T ss_pred             CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcCCCCCCcchHHHH
Confidence            4566788899999999999999999999999998765 68999999999988888899999987

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.6e-23  Score=178.79  Aligned_cols=153  Identities=26%  Similarity=0.337  Sum_probs=120.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..|+||+++||||++|||.+++++|+++|++|++++|+....++..+.+   .     ..++++|++++++++++     
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~---~-----~~~~~~D~~~~~~~~~~-----   69 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV---G-----GLFVPTDVTDEDAVNAL-----   69 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---C-----CcEEEeeCCCHHHHHHH-----
Confidence            3478999999999999999999999999999999999876554433321   1     13567777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.++++|++|||||...+
T Consensus        70 ---------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~   92 (255)
T PRK06057         70 ---------------------------------------------------------FDTAAETYGSVDIAFNNAGISPP   92 (255)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCC
Confidence                                                                     55555555666666666665432


Q ss_pred             --ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC-CCCccccCC
Q psy9256         202 --AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP-YSGSYTDHL  265 (265)
Q Consensus       202 --~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~-~~~~Y~asK  265 (265)
                        .++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+..+.+ ++..|++||
T Consensus        93 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~~~~~Y~~sK  158 (255)
T PRK06057         93 EDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSATSQISYTASK  158 (255)
T ss_pred             CCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCCCCcchHHHH
Confidence              3466778899999999999999999999999998765 68999999988877654 678899887

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.90  E-value=8.2e-23  Score=176.05  Aligned_cols=155  Identities=27%  Similarity=0.329  Sum_probs=123.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++|+++||||++|||.++|++|+++|++|+++.|+.+ ..+++.+.+...   +.++.++.+|+++++++.++     
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~-----   73 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA---GGRAIAVQADVADAAAVTRL-----   73 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHH-----
Confidence            457899999999999999999999999999988877643 233343333332   24566666777776666666     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.++++|++|||||....
T Consensus        74 ---------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~   96 (245)
T PRK12937         74 ---------------------------------------------------------FDAAETAFGRIDVLVNNAGVMPL   96 (245)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     66666667777777777777656


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++++++|+.+++.++++++|.|.+   .|+||++||.++..+.|+++.|+++|
T Consensus        97 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (245)
T PRK12937         97 GTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIALPLPGYGPYAASK  157 (245)
T ss_pred             CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeeccccCCCCCCchhHHHH
Confidence            67778888999999999999999999999999853   48999999999999999999999987

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.90  E-value=7.8e-23  Score=177.06  Aligned_cols=149  Identities=28%  Similarity=0.350  Sum_probs=125.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.         ...   .+.++.++++|++++++++++     
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~---~~~~~~~~~~D~~~~~~~~~~-----   66 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ---EDYPFATFVLDVSDAAAVAQV-----   66 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh---cCCceEEEEecCCCHHHHHHH-----
Confidence            357899999999999999999999999999999999875         111   124567777888887777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.++++++|++|||||....
T Consensus        67 ---------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~   89 (252)
T PRK08220         67 ---------------------------------------------------------CQRLLAETGPLDVLVNAAGILRM   89 (252)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCC
Confidence                                                                     66666666777777777777666


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .|+||++||..+..+.++.+.|++||
T Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~~~~~~~Y~~sK  152 (252)
T PRK08220         90 GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVPRIGMAAYGASK  152 (252)
T ss_pred             CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccCCCCCchhHHHH
Confidence            6777888999999999999999999999999998765 68999999999998888899999987

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.90  E-value=8.2e-23  Score=175.71  Aligned_cols=151  Identities=26%  Similarity=0.325  Sum_probs=120.4

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      ++||||++|||.++|++|+++|++|++++|+. +..++..+.+...   +.++.++++|++|++++.++           
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~-----------   66 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ---GGNARLLQFDVADRVACRTL-----------   66 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---CCeEEEEEccCCCHHHHHHH-----------
Confidence            58999999999999999999999999998764 3444444444332   24577777777777777766           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         ++++.+.++++|++|||||.....++.+.
T Consensus        67 ---------------------------------------------------~~~~~~~~~~i~~li~~ag~~~~~~~~~~   95 (239)
T TIGR01831        67 ---------------------------------------------------LEADIAEHGAYYGVVLNAGITRDAAFPAL   95 (239)
T ss_pred             ---------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCchhhC
Confidence                                                               66666666777778888777666677788


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHH-HhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATS-YFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p-~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.++|++++++|+.+++++++.+++ .+.+++ .|++|++||.++..+.++++.|++||
T Consensus        96 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK  153 (239)
T TIGR01831        96 SEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGNRGQVNYSAAK  153 (239)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCCCCCcchHHHH
Confidence            8999999999999999999998864 444343 68999999999999999999999987

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=9e-23  Score=176.59  Aligned_cols=159  Identities=28%  Similarity=0.403  Sum_probs=128.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCC--ChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT--QTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~  119 (265)
                      ..+++|+++||||++|||.+++++|++.|++|++++|+.+..++..+++...+  ..+..++.+|++  +++++.++   
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~d~~~~~~~~~~~~---   82 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG--GPQPAIIPLDLLTATPQNYQQL---   82 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC--CCCceEEEecccCCCHHHHHHH---
Confidence            34689999999999999999999999999999999999877776666655443  234556666665  55666666   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++.+.+.++++|++|||||..
T Consensus        83 -----------------------------------------------------------~~~~~~~~~~id~vi~~Ag~~  103 (247)
T PRK08945         83 -----------------------------------------------------------ADTIEEQFGRLDGVLHNAGLL  103 (247)
T ss_pred             -----------------------------------------------------------HHHHHHHhCCCCEEEECCccc
Confidence                                                                       555555666677777776654


Q ss_pred             c-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 Q-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      . ..++.+.+.++|++.+++|+.+++++++++.|.|.+++ .++||++||.++..+.+++..|++||
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK  169 (247)
T PRK08945        104 GELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRANWGAYAVSK  169 (247)
T ss_pred             CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCCCCcccHHHH
Confidence            3 34667788899999999999999999999999998765 78999999999999999999999887

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.90  E-value=6e-23  Score=201.73  Aligned_cols=161  Identities=22%  Similarity=0.321  Sum_probs=130.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..++||+++||||++|||++++++|+++|++|++++|+.+.++++.+.+.... ...+...+++|++|++++.++     
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~-~~~~~~~v~~Dvtd~~~v~~a-----  483 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQF-GAGRAVALKMDVTDEQAVKAA-----  483 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCcEEEEECCCCCHHHHHHH-----
Confidence            35789999999999999999999999999999999998776666555443221 112455566666666666655     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|++|||||....
T Consensus       484 ---------------------------------------------------------~~~i~~~~g~iDilV~nAG~~~~  506 (676)
T TIGR02632       484 ---------------------------------------------------------FADVALAYGGVDIVVNNAGIATS  506 (676)
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCcEEEECCCCCCC
Confidence                                                                     77777777777777777777666


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|+..+++|+.+++.+++.++|.|++++.+|+||++||.++..+.++..+|++||
T Consensus       507 ~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSK  570 (676)
T TIGR02632       507 SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAK  570 (676)
T ss_pred             CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHH
Confidence            7778888999999999999999999999999998765458999999999999999999999987

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.1e-23  Score=201.70  Aligned_cols=158  Identities=30%  Similarity=0.381  Sum_probs=125.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||.+++++|+++|++|++++|+++.++++.+.+...+   .++.++.+|++|++++.++++.+.
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~  443 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG---GTAHAYTCDLTDSAAVDHTVKDIL  443 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999887777766654432   467778888888888887755544


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                      +.+                                                              |++|++|||||....
T Consensus       444 ~~~--------------------------------------------------------------g~id~li~~Ag~~~~  461 (657)
T PRK07201        444 AEH--------------------------------------------------------------GHVDYLVNNAGRSIR  461 (657)
T ss_pred             Hhc--------------------------------------------------------------CCCCEEEECCCCCCC
Confidence            444                                                              445555555554332


Q ss_pred             cccccc--chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDI--ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.  +.+++++++++|+.|++++++.++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus       462 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  526 (657)
T PRK07201        462 RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNAPRFSAYVASK  526 (657)
T ss_pred             CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCCcchHHHHH
Confidence            222222  2478999999999999999999999998775 79999999999999999999999987

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-22  Score=176.39  Aligned_cols=157  Identities=22%  Similarity=0.315  Sum_probs=125.5

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      |.++++++++||||++|||.++|++|+++|++|++. .|+.+..++..+.+..   .+.++.++++|++|++++.++   
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~i~~~---   74 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIES---NGGKAFLIEADLNSIDGVKKL---   74 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCcEEEEEcCcCCHHHHHHH---
Confidence            345778999999999999999999999999999775 6766555444443322   234567778888888887777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc------ccccEEE
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF------GCLDILI  193 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~------g~ldilV  193 (265)
                                                                                 ++++.+++      +++|++|
T Consensus        75 -----------------------------------------------------------~~~~~~~~~~~~~~~~id~vi   95 (254)
T PRK12746         75 -----------------------------------------------------------VEQLKNELQIRVGTSEIDILV   95 (254)
T ss_pred             -----------------------------------------------------------HHHHHHHhccccCCCCccEEE
Confidence                                                                       44444443      4678888


Q ss_pred             ecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         194 NNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       194 nnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ||||....+++.+.+.+.|++.+++|+.+++++++.+.|.|.+   .|++|++||..+..+.++++.|++||
T Consensus        96 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~~sS~~~~~~~~~~~~Y~~sK  164 (254)
T PRK12746         96 NNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGRVINISSAEVRLGFTGSIAYGLSK  164 (254)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCHHhcCCCCCCcchHhhH
Confidence            8888766677778889999999999999999999999999853   37999999999998999999999987

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.89  E-value=1.3e-22  Score=175.99  Aligned_cols=150  Identities=21%  Similarity=0.337  Sum_probs=122.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      ++++||||++|||.+++++|+++|++|++++|+++.++++.+.+      +.++.++.+|++|++++.++          
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~i~~~----------   64 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL------GDNLYIAQLDVRNRAAIEEM----------   64 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------ccceEEEEecCCCHHHHHHH----------
Confidence            36899999999999999999999999999999877665544332      13566778888888777777          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-ccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RAAWE  205 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~~~~~  205 (265)
                                                                          ++++.+.++++|++|||||... ..+..
T Consensus        65 ----------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~~   92 (248)
T PRK10538         65 ----------------------------------------------------LASLPAEWRNIDVLVNNAGLALGLEPAH   92 (248)
T ss_pred             ----------------------------------------------------HHHHHHHcCCCCEEEECCCccCCCCCcc
Confidence                                                                5555556666677777776542 34567


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++++++|+.|++.+++.++|.|.+++ .|++|++||.++..+.++.+.|++||
T Consensus        93 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  151 (248)
T PRK10538         93 KASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATK  151 (248)
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCCCCCchhHHHH
Confidence            788899999999999999999999999998765 68999999999998888999999887

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.89  E-value=1.7e-22  Score=173.59  Aligned_cols=153  Identities=21%  Similarity=0.286  Sum_probs=121.7

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEec-CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSAR-SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |+++||||++|||..++++|+++|++|+++.| +++..++..+.....   +.++.++.+|++|++++.++         
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~---------   68 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL---GFDFRVVEGDVSSFESCKAA---------   68 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh---CCceEEEEecCCCHHHHHHH---------
Confidence            68999999999999999999999999999888 433333333322221   24566667777777666666         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.+.++++|++|||||.....++.
T Consensus        69 -----------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~   95 (242)
T TIGR01829        69 -----------------------------------------------------VAKVEAELGPIDVLVNNAGITRDATFK   95 (242)
T ss_pred             -----------------------------------------------------HHHHHHHcCCCcEEEECCCCCCCCChh
Confidence                                                                 666666667777777777766666677


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||.++..+.++++.|+++|
T Consensus        96 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~sk  154 (242)
T TIGR01829        96 KMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQFGQTNYSAAK  154 (242)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCcchhHHHH
Confidence            888899999999999999999999999998765 68999999999999989999999886

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2e-22  Score=174.07  Aligned_cols=155  Identities=30%  Similarity=0.373  Sum_probs=118.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|+++||||++|||.+++++|+++|++|+++.++ ++..++..+.+...   +.++.++++|++|.+++.++        
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~--------   70 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ---GGEALAVAADVADEADVLRL--------   70 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC---CCcEEEEEeccCCHHHHHHH--------
Confidence            5799999999999999999999999999888754 33333333333322   24566777888887777777        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-ccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RAA  203 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~~~  203 (265)
                                                                            ++++.++++++|++|||||... ..+
T Consensus        71 ------------------------------------------------------~~~~~~~~~~id~li~~ag~~~~~~~   96 (248)
T PRK06123         71 ------------------------------------------------------FEAVDRELGRLDALVNNAGILEAQMR   96 (248)
T ss_pred             ------------------------------------------------------HHHHHHHhCCCCEEEECCCCCCCCCC
Confidence                                                                  5555555666666666666543 245


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc--CCceEEEEcccccccCCCCC-CccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLARE--QGGHLVVTSSIAGIVGAPYS-GSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~--~~g~IV~isS~ag~~~~~~~-~~Y~asK  265 (265)
                      +.+.+.++|++.+++|+.+++.+++.++|.|.++.  .+|+||++||.++..+.++. ..|++||
T Consensus        97 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         97 LEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            67788899999999999999999999999997642  24799999999998887764 6799987

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.89  E-value=1.9e-22  Score=174.01  Aligned_cols=158  Identities=27%  Similarity=0.425  Sum_probs=130.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+++|+++||||+++||.+++++|+++|++|++++|+.+..++..+.+...+   .++.++.+|++|++++.++     
T Consensus         2 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~-----   73 (251)
T PRK12826          2 RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG---GKARARQVDVRDRAALKAA-----   73 (251)
T ss_pred             CCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHH-----
Confidence            34678999999999999999999999999999999998776665555444322   3566777777777777776     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.++++++|++||++|....
T Consensus        74 ---------------------------------------------------------~~~~~~~~~~~d~vi~~ag~~~~   96 (251)
T PRK12826         74 ---------------------------------------------------------VAAGVEDFGRLDILVANAGIFPL   96 (251)
T ss_pred             ---------------------------------------------------------HHHHHHHhCCCCEEEECCCCCCC
Confidence                                                                     66666677777888888777666


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-cCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-VGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-~~~~~~~~Y~asK  265 (265)
                      .++.+.+.+++++.+++|+.+++.+.+.++|.|.+++ .+++|++||..+. .+.++.+.|+++|
T Consensus        97 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~~y~~sK  160 (251)
T PRK12826         97 TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVGYPGLAHYAASK  160 (251)
T ss_pred             CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccCCCCccHHHHHH
Confidence            6777888999999999999999999999999998765 6899999999988 7788888999886

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.89  E-value=3.5e-22  Score=172.70  Aligned_cols=155  Identities=32%  Similarity=0.389  Sum_probs=121.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEe-cCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|+++||||++|||.++++.|+++|++|+++. |+++.+++..+++...   +.++..++||+++++++.++        
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~--------   70 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA---GGRACVVAGDVANEADVIAM--------   70 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEeccCCHHHHHHH--------
Confidence            47899999999999999999999999998775 4555555555544432   24677788888888777777        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc-cc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-AA  203 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~-~~  203 (265)
                                                                            ++++.+.++++|++|||||.... .+
T Consensus        71 ------------------------------------------------------~~~~~~~~~~id~li~~ag~~~~~~~   96 (248)
T PRK06947         71 ------------------------------------------------------FDAVQSAFGRLDALVNNAGIVAPSMP   96 (248)
T ss_pred             ------------------------------------------------------HHHHHHhcCCCCEEEECCccCCCCCC
Confidence                                                                  55555556667777777776533 45


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc--CCceEEEEcccccccCCCC-CCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLARE--QGGHLVVTSSIAGIVGAPY-SGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~--~~g~IV~isS~ag~~~~~~-~~~Y~asK  265 (265)
                      +.+.++++|++.+++|+.+++++++.++|.|..++  ..|++|++||.++..+.+. ++.|++||
T Consensus        97 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         97 LADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             hhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            67788899999999999999999999999987543  2478999999999887664 57899987

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=3.5e-22  Score=173.37  Aligned_cols=155  Identities=25%  Similarity=0.350  Sum_probs=122.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|+++||||++|||.+++++|+++|++|++++|+.+ ..++..+.+...   +.++.++.+|+++++++.++        
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~--------   70 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL---GVEVIFFPADVADLSAHEAM--------   70 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHH--------
Confidence            479999999999999999999999999999998643 333333333222   24677777888887777777        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc--cc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ--RA  202 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~--~~  202 (265)
                                                                            ++++.+.++++|++|||||...  ..
T Consensus        71 ------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~   96 (256)
T PRK12745         71 ------------------------------------------------------LDAAQAAWGRIDCLVNNAGVGVKVRG   96 (256)
T ss_pred             ------------------------------------------------------HHHHHHhcCCCCEEEECCccCCCCCC
Confidence                                                                  6666666666777777776542  24


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-----CceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ-----GGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-----~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.++++|++.+++|+.+++.+++.+.|.|.++..     .+++|++||..+..+.++.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (256)
T PRK12745         97 DLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISK  164 (256)
T ss_pred             ChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccHHHH
Confidence            5777888999999999999999999999999987642     35799999999999989999999987

>KOG1199|consensus

Probab=99.89  E-value=3.3e-23  Score=166.64  Aligned_cols=162  Identities=25%  Similarity=0.307  Sum_probs=134.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ...+|-+++||||.+|+|++.|++|+.+|++|++.+-..++.++...++      +.++.+.+.|++++++++..++.++
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel------g~~~vf~padvtsekdv~aala~ak   78 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL------GGKVVFTPADVTSEKDVRAALAKAK   78 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh------CCceEEeccccCcHHHHHHHHHHHH
Confidence            3456889999999999999999999999999999998888777665544      4789999999999999999988888


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                      ..+||+|.+|||||+.-..+.++.                                                        
T Consensus        79 ~kfgrld~~vncagia~a~ktyn~--------------------------------------------------------  102 (260)
T KOG1199|consen   79 AKFGRLDALVNCAGIAYAFKTYNV--------------------------------------------------------  102 (260)
T ss_pred             hhccceeeeeeccceeeeeeeeee--------------------------------------------------------
Confidence            888888888888886433321111                                                        


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc-----CCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE-----QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~-----~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..-...+.|++++++++|++|+|.+++.-.-.|-+..     .+|.|||..|++++-+..++++|++||
T Consensus       103 ~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaaysask  171 (260)
T KOG1199|consen  103 QKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAAYSASK  171 (260)
T ss_pred             cccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhhhhccc
Confidence            1123356689999999999999999999998885432     358999999999999999999999998

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.7e-22  Score=173.18  Aligned_cols=151  Identities=28%  Similarity=0.320  Sum_probs=124.7

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||.+++++|+++|++|++++|+++..++..+.+...+  ..++.++++|++++++++++          
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~----------   69 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARG--AVAVSTHELDILDTASHAAF----------   69 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhc--CCeEEEEecCCCChHHHHHH----------
Confidence            689999999999999999999999999999999877666555443322  34677777888877776666          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++++.+   ++|++|||+|.....+..+
T Consensus        70 ----------------------------------------------------~~~~~~---~~d~vv~~ag~~~~~~~~~   94 (243)
T PRK07102         70 ----------------------------------------------------LDSLPA---LPDIVLIAVGTLGDQAACE   94 (243)
T ss_pred             ----------------------------------------------------HHHHhh---cCCEEEECCcCCCCccccc
Confidence                                                                444432   3588888888766666778


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.+++.+.+++|+.+++++++++.|.|.+++ .|++|++||.++..+.++...|++||
T Consensus        95 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  152 (243)
T PRK07102         95 ADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGRASNYVYGSAK  152 (243)
T ss_pred             CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCCCCCcccHHHH
Confidence            88899999999999999999999999998765 69999999999999989999999887

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=3.8e-22  Score=172.67  Aligned_cols=159  Identities=21%  Similarity=0.251  Sum_probs=118.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++|+++||||++|||.++|++|+++|++|+++.++ ++..+++..   +..   .++.++.+|+++++++.++++.+.+
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~---~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   76 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALAD---ELG---DRAIALQADVTDREQVQAMFATATE   76 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH---HhC---CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999999887654 333332222   221   3577788888888888888555555


Q ss_pred             HhCC-ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         123 QFGC-LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       123 ~~g~-ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                      .+|+ +|++|||||+....                                                        .....
T Consensus        77 ~~g~~id~li~~ag~~~~~--------------------------------------------------------~~~~~  100 (253)
T PRK08642         77 HFGKPITTVVNNALADFSF--------------------------------------------------------DGDAR  100 (253)
T ss_pred             HhCCCCeEEEECCCccccc--------------------------------------------------------cccCC
Confidence            5554 55555555421000                                                        00012


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+.+..|++||
T Consensus       101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK  163 (253)
T PRK08642        101 KKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQNPVVPYHDYTTAK  163 (253)
T ss_pred             CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCccchHHHH
Confidence            3567788899999999999999999999999997665 69999999988877777788999987

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.1e-22  Score=171.80  Aligned_cols=158  Identities=28%  Similarity=0.438  Sum_probs=123.0

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc----HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN----LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      ..+++++++||||++|||.++|+.|+++|++|++++|...+    .+++.+++...   +.++.++.+|++++++++++ 
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~-   77 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA---GGKALGLAFDVRDFAATRAA-   77 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHH-
Confidence            45678999999999999999999999999999997764322    22222222221   23455556666666555555 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.+.++++|++|||||
T Consensus        78 -------------------------------------------------------------~~~~~~~~~~~d~vi~~ag   96 (249)
T PRK12827         78 -------------------------------------------------------------LDAGVEEFGRLDILVNNAG   96 (249)
T ss_pred             -------------------------------------------------------------HHHHHHHhCCCCEEEECCC
Confidence                                                                         7777777788888888888


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHH-HHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIAT-SYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .....++.+.+.++|++.+++|+.+++++++.+. |.|++++ .+++|++||.++..+.+++..|+++|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sK  164 (249)
T PRK12827         97 IATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNRGQVNYAASK  164 (249)
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCCCCchhHHHH
Confidence            8776778888899999999999999999999999 5555443 68999999999999889999999887

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=3.9e-22  Score=172.27  Aligned_cols=165  Identities=26%  Similarity=0.346  Sum_probs=127.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++|++++||||++|||.+++++|+++|++|++++|+++++++..+++...   +.++..+++|++++++++++++.+.+
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL---GTEVRGYAANVTDEEDVEATFAQIAE   78 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999887777666655443   35777888999999888888777666


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                      .++++|.+|||||+........                                                      ....
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~------------------------------------------------------~~~~  104 (253)
T PRK08217         79 DFGQLNGLINNAGILRDGLLVK------------------------------------------------------AKDG  104 (253)
T ss_pred             HcCCCCEEEECCCccCcCcccc------------------------------------------------------cccc
Confidence            6666777777776421110000                                                      0011


Q ss_pred             cc-cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AW-EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++ .+.+.++|++++++|+.+++++++.++|.|.++..+|.|+++||.+ ..+.++.+.|++||
T Consensus       105 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~~~Y~~sK  167 (253)
T PRK08217        105 KVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQTNYSASK  167 (253)
T ss_pred             cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCCchhHHHH
Confidence            22 5678889999999999999999999999998764468899999864 46778889999987

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=2.4e-22  Score=173.01  Aligned_cols=157  Identities=30%  Similarity=0.422  Sum_probs=129.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++++|+++||||++|||.+++++|+++|++|+++ +|+++..+++.+.+...   +.++.++.+|+++++++.++     
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~-----   73 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE---GGDAIAVKADVSSEEDVENL-----   73 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHH-----
Confidence            4678999999999999999999999999999998 88877666655554432   24566777777777777766     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.++++|++|||+|....
T Consensus        74 ---------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~   96 (247)
T PRK05565         74 ---------------------------------------------------------VEQIVEKFGKIDILVNNAGISNF   96 (247)
T ss_pred             ---------------------------------------------------------HHHHHHHhCCCCEEEECCCcCCC
Confidence                                                                     66666666777777777777655


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .+++|++||..+..+.+....|+++|
T Consensus        97 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~sK  159 (247)
T PRK05565         97 GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGASCEVLYSASK  159 (247)
T ss_pred             CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCCCccHHHHHH
Confidence            6677788999999999999999999999999998765 68999999999998888889998876

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.3e-22  Score=177.44  Aligned_cols=132  Identities=23%  Similarity=0.306  Sum_probs=102.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ++|+++|||+ +|||+++|++|+ +|++|++++|+.+.++++.+++...   +.++.++++|++|++++.++        
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~~i~~~--------   67 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA---GFDVSTQEVDVSSRESVKAL--------   67 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEeecCCHHHHHHH--------
Confidence            3689999998 699999999996 8999999999887776666555432   34677788888888888777        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++++ ++++++|++|||||...    
T Consensus        68 ------------------------------------------------------~~~~-~~~g~id~li~nAG~~~----   88 (275)
T PRK06940         68 ------------------------------------------------------AATA-QTLGPVTGLVHTAGVSP----   88 (275)
T ss_pred             ------------------------------------------------------HHHH-HhcCCCCEEEECCCcCC----
Confidence                                                                  4444 23455666666665431    


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG  254 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~  254 (265)
                         +.++|++++++|+.|++++++.+.|.|.+   +|++|++||.++..+
T Consensus        89 ---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~  132 (275)
T PRK06940         89 ---SQASPEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQSGHRL  132 (275)
T ss_pred             ---chhhHHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEecccccC
Confidence               13578999999999999999999999964   378899999988765

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.6e-22  Score=175.14  Aligned_cols=153  Identities=33%  Similarity=0.541  Sum_probs=124.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +++++||||++|||.+++++|+++|++|++++|+++..+++.+.+...   +.++.++.+|++|++++..+         
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~---------   68 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH---GGEALVVPTDVSDAEACERL---------   68 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHH---------
Confidence            478999999999999999999999999999999877666555544432   24566677777777777766         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.++++++|++|||||.....++.
T Consensus        69 -----------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~   95 (263)
T PRK06181         69 -----------------------------------------------------IEAAVARFGGIDILVNNAGITMWSRFD   95 (263)
T ss_pred             -----------------------------------------------------HHHHHHHcCCCCEEEECCCcccccchh
Confidence                                                                 666666666677777777766555666


Q ss_pred             cc-chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DI-ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~-~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +. +.+++++.+++|+.+++.+++.+.|.|.++  .|++|++||.++..+.++++.|++||
T Consensus        96 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  154 (263)
T PRK06181         96 ELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSLAGLTGVPTRSGYAASK  154 (263)
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecccccCCCCCccHHHHHH
Confidence            66 888999999999999999999999998754  48999999999999989999999887

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=3.9e-22  Score=172.50  Aligned_cols=157  Identities=25%  Similarity=0.328  Sum_probs=124.2

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      |.++.+++++||||++|||.+++++|+++|++|++..|+. +........+...   +.+...+.+|+++++++.++   
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~---   74 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN---GGEGIGVLADVSTREGCETL---   74 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc---CCeeEEEEeccCCHHHHHHH---
Confidence            3457789999999999999999999999999998876543 3333332333222   23455666777777666666   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+.++++|++|||||..
T Consensus        75 -----------------------------------------------------------~~~~~~~~~~~d~vi~~ag~~   95 (252)
T PRK06077         75 -----------------------------------------------------------AKATIDRYGVADILVNNAGLG   95 (252)
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCCC
Confidence                                                                       666766777788888888876


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...+..+.+.++|++.+++|+.+++.+++.+.|.|.+   .|++|++||.++..+.++++.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (252)
T PRK06077         96 LFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGIRPAYGLSIYGAMK  158 (252)
T ss_pred             CCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhccCCCCCchHHHHHH
Confidence            6667777888899999999999999999999999854   48999999999999999999999987

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.7e-22  Score=171.26  Aligned_cols=156  Identities=30%  Similarity=0.366  Sum_probs=126.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+++++++||||+++||.+++++|++.|++|++++|+++.+++..+.+...    .++..+.+|+++++++..+     
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~~~~~~-----   72 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK----GNVLGLAADVRDEADVQRA-----   72 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc----CcEEEEEccCCCHHHHHHH-----
Confidence            3467899999999999999999999999999999999887666555544321    3567777888887777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.++++|++||++|....
T Consensus        73 ---------------------------------------------------------~~~~~~~~~~~d~vi~~ag~~~~   95 (237)
T PRK07326         73 ---------------------------------------------------------VDAIVAAFGGLDVLIANAGVGHF   95 (237)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     66666666677777777776666


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++.+.+.+++++.+++|+.+++++++++++.|. ++ .|++|++||.++..+.++...|+++|
T Consensus        96 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-~~~iv~~ss~~~~~~~~~~~~y~~sk  157 (237)
T PRK07326         96 APVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RG-GGYIINISSLAGTNFFAGGAAYNASK  157 (237)
T ss_pred             CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HC-CeEEEEECChhhccCCCCCchHHHHH
Confidence            6677888999999999999999999999999983 33 58999999999988888888898876

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.88  E-value=1.2e-22  Score=175.57  Aligned_cols=144  Identities=31%  Similarity=0.443  Sum_probs=116.2

Q ss_pred             CCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccEE
Q psy9256          53 GAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDIL  130 (265)
Q Consensus        53 Gas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldil  130 (265)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+.+.+...  .+  ++++|++++++++++              
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~--~~--~~~~D~~~~~~v~~~--------------   62 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG--AE--VIQCDLSDEESVEAL--------------   62 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT--SE--EEESCTTSHHHHHHH--------------
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC--Cc--eEeecCcchHHHHHH--------------
Confidence            566  9999999999999999999999999876665555544331  22  478888888887777              


Q ss_pred             EeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc-ccccEEEeccccccc----cccc
Q psy9256         131 INNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQR----AAWE  205 (265)
Q Consensus       131 innAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~-g~ldilVnnAG~~~~----~~~~  205 (265)
                                                                      ++++.+++ |++|++|||+|....    .++.
T Consensus        63 ------------------------------------------------~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~   94 (241)
T PF13561_consen   63 ------------------------------------------------FDEAVERFGGRIDILVNNAGISPPSNVEKPLL   94 (241)
T ss_dssp             ------------------------------------------------HHHHHHHHCSSESEEEEEEESCTGGGTSSSGG
T ss_pred             ------------------------------------------------HHHHHhhcCCCeEEEEecccccccccCCCChH
Confidence                                                            55555555 566666666665543    6788


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++.+++|+.+++.++|++.|+|.+   +|+||++||.++..+.|++..|+++|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gsii~iss~~~~~~~~~~~~y~~sK  151 (241)
T PF13561_consen   95 DLSEEDWDKTFDINVFSPFLLAQAALPLMKK---GGSIINISSIAAQRPMPGYSAYSASK  151 (241)
T ss_dssp             GSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---EEEEEEEEEGGGTSBSTTTHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcccccchhhcccCccchhhHHHH
Confidence            8999999999999999999999999997765   38999999999999999999999886

...

>PRK12742 oxidoreductase; Provisional

Probab=99.88  E-value=6e-22  Score=170.00  Aligned_cols=147  Identities=22%  Similarity=0.315  Sum_probs=113.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..+++|+++||||++|||++++++|+++|++|++++++ ++..+++..   +.     ...++.+|++|.+++.++    
T Consensus         2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~---~~-----~~~~~~~D~~~~~~~~~~----   69 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ---ET-----GATAVQTDSADRDAVIDV----   69 (237)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH---Hh-----CCeEEecCCCCHHHHHHH----
Confidence            45789999999999999999999999999999888764 333332221   11     234566777777665544    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++    .++++|++|||||...
T Consensus        70 ----------------------------------------------------------~~----~~~~id~li~~ag~~~   87 (237)
T PRK12742         70 ----------------------------------------------------------VR----KSGALDILVVNAGIAV   87 (237)
T ss_pred             ----------------------------------------------------------HH----HhCCCcEEEECCCCCC
Confidence                                                                      32    2456777777777665


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-cCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-VGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-~~~~~~~~Y~asK  265 (265)
                      ..+..+.++++|++.+++|+.+++++++++.|.|.+   .|+||++||..+. .+.++...|+++|
T Consensus        88 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~Y~~sK  150 (237)
T PRK12742         88 FGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGDRMPVAGMAAYAASK  150 (237)
T ss_pred             CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEeccccccCCCCCCcchHHhH
Confidence            556677888999999999999999999999999853   4899999999884 5778899999987

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.8e-22  Score=173.55  Aligned_cols=146  Identities=23%  Similarity=0.206  Sum_probs=104.3

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +..++++||+++||||++|||.++|++|+++|++|++++|+.....  ...   ..  .. ...+.+|++|.+++.+   
T Consensus         7 ~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~--~~~---~~--~~-~~~~~~D~~~~~~~~~---   75 (245)
T PRK12367          7 MAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNS--ESN---DE--SP-NEWIKWECGKEESLDK---   75 (245)
T ss_pred             hhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhh--hhh---cc--CC-CeEEEeeCCCHHHHHH---
Confidence            4557889999999999999999999999999999999998762211  110   11  11 2456777777655332   


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                        .++++|++|||||.
T Consensus        76 ------------------------------------------------------------------~~~~iDilVnnAG~   89 (245)
T PRK12367         76 ------------------------------------------------------------------QLASLDVLILNHGI   89 (245)
T ss_pred             ------------------------------------------------------------------hcCCCCEEEECCcc
Confidence                                                                              23456666666664


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc--CCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE--QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~--~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..   ..+.+.++|++.+++|+.|++++++.++|.|.+++  .++.+++.+|.++..+ ++.++|++||
T Consensus        90 ~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSK  154 (245)
T PRK12367         90 NP---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISK  154 (245)
T ss_pred             CC---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHH
Confidence            32   23467899999999999999999999999997642  1344555566666554 5678899998

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6.3e-22  Score=171.86  Aligned_cols=148  Identities=32%  Similarity=0.502  Sum_probs=122.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||++|||.+++++|++.|++|++++|+++..+++.+.....   +.++.++.+|++|++++.+.         
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~---------   69 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR---GLALRVEKLDLTDAIDRAQA---------   69 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcceEEEeeCCCHHHHHHH---------
Confidence            678999999999999999999999999999999876665555444332   23566777888877665544         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++      +++|++|||||....++..
T Consensus        70 -----------------------------------------------------~~------~~id~vi~~ag~~~~~~~~   90 (257)
T PRK09291         70 -----------------------------------------------------AE------WDVDVLLNNAGIGEAGAVV   90 (257)
T ss_pred             -----------------------------------------------------hc------CCCCEEEECCCcCCCcCcc
Confidence                                                                 21      3678888888877777888


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||.++..+.|+...|++||
T Consensus        91 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~Y~~sK  149 (257)
T PRK09291         91 DIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITGPFTGAYCASK  149 (257)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCCCCcchhHHHH
Confidence            899999999999999999999999999998776 58999999999998888899999887

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6.8e-22  Score=170.73  Aligned_cols=144  Identities=26%  Similarity=0.372  Sum_probs=114.6

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      ++++||||++|||.+++++|+++|++|++++|+++.++++.+.       ..++.++++|++|+++++++          
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~----------   64 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-------SANIFTLAFDVTDHPGTKAA----------   64 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-------cCCCeEEEeeCCCHHHHHHH----------
Confidence            6899999999999999999999999999999987655443321       13566778888888777776          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++++.   ..+|++|||||.....+..+
T Consensus        65 ----------------------------------------------------~~~~~---~~~d~~i~~ag~~~~~~~~~   89 (240)
T PRK06101         65 ----------------------------------------------------LSQLP---FIPELWIFNAGDCEYMDDGK   89 (240)
T ss_pred             ----------------------------------------------------HHhcc---cCCCEEEEcCcccccCCCCC
Confidence                                                                33332   13566677776543334456


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++++|++++++|+.|++++++.+.|+|.+   ++++|++||.++..+.|+...|++||
T Consensus        90 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~Y~asK  145 (240)
T PRK06101         90 VDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASELALPRAEAYGASK  145 (240)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhccCCCCCchhhHHH
Confidence            788999999999999999999999999853   47899999999999999999999987

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.88  E-value=1.7e-21  Score=167.25  Aligned_cols=157  Identities=29%  Similarity=0.422  Sum_probs=130.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|++|+++||||+++||..++++|+++|++|++++|+++..+.....+...   +.+..++.+|+++++++.++      
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~------   72 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA---GGEARVLVFDVSDEAAVRAL------   72 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHH------
Confidence            467889999999999999999999999999999999987766655554433   24566677777777776666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+.++++|++||+||.....
T Consensus        73 --------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~   96 (246)
T PRK05653         73 --------------------------------------------------------IEAAVEAFGALDILVNNAGITRDA   96 (246)
T ss_pred             --------------------------------------------------------HHHHHHHhCCCCEEEECCCcCCCC
Confidence                                                                    666666677888888888876666


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +..+.+.++|++.++.|+.+++.+++.+.|.|.+.+ .+++|++||..+..+.+..+.|+.+|
T Consensus        97 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~~~~~~y~~sk  158 (246)
T PRK05653         97 LLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGNPGQTNYSAAK  158 (246)
T ss_pred             ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCCCCCcHhHhHH
Confidence            777888999999999999999999999999997655 58999999999888888888898876

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.3e-21  Score=167.41  Aligned_cols=155  Identities=28%  Similarity=0.360  Sum_probs=124.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .+++|+++||||+++||..++++|+++|++|++++|+++..++..+.+...     ....+.+|++|.+++.++      
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~------   72 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD-----ALRIGGIDLVDPQAARRA------   72 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc-----CceEEEeecCCHHHHHHH------
Confidence            467899999999999999999999999999999999876655544433221     244556777777766666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+.++++|+++|++|.....
T Consensus        73 --------------------------------------------------------~~~~~~~~~~~d~vi~~ag~~~~~   96 (239)
T PRK12828         73 --------------------------------------------------------VDEVNRQFGRLDALVNIAGAFVWG   96 (239)
T ss_pred             --------------------------------------------------------HHHHHHHhCCcCEEEECCcccCcC
Confidence                                                                    666666666777777777765555


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +..+.+++++++.+++|+.+++.+++.++|.|.+++ .+++|++||..+..+.+.+..|+++|
T Consensus        97 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (239)
T PRK12828         97 TIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAGPGMGAYAAAK  158 (239)
T ss_pred             ChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCCCCcchhHHHH
Confidence            566778899999999999999999999999998665 78999999999988888888898876

>PRK08324 short chain dehydrogenase; Validated

Probab=99.87  E-value=1e-21  Score=193.50  Aligned_cols=158  Identities=27%  Similarity=0.334  Sum_probs=132.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+.||+++||||++|||.+++++|+++|++|++++|+.+.++++.+.+...    .++.++.+|+++++++.++     
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~----~~v~~v~~Dvtd~~~v~~~-----  488 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP----DRALGVACDVTDEAAVQAA-----  488 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc----CcEEEEEecCCCHHHHHHH-----
Confidence            3568999999999999999999999999999999999887766555443221    3566777777777777766     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.+|++|++|||||....
T Consensus       489 ---------------------------------------------------------~~~~~~~~g~iDvvI~~AG~~~~  511 (681)
T PRK08324        489 ---------------------------------------------------------FEEAALAFGGVDIVVSNAGIAIS  511 (681)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     66666666777777777777777


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++.+.+.++|++.+++|+.|++.+++.+.|.|.+++.+|+||++||.++..+.++++.|++||
T Consensus       512 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asK  575 (681)
T PRK08324        512 GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAK  575 (681)
T ss_pred             CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHH
Confidence            7788889999999999999999999999999998765348999999999999999999999987

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.5e-21  Score=168.55  Aligned_cols=159  Identities=27%  Similarity=0.412  Sum_probs=126.4

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+..+++|+++||||++|||..++++|+++|++|++++|+++..++..+...     ..++.++.+|+++++++..+   
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~---   76 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP-----GAKVTATVADVADPAQVERV---   76 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-----cCceEEEEccCCCHHHHHHH---
Confidence            3456789999999999999999999999999999999998766554433321     11456677777777777766   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+.++++|++||+||..
T Consensus        77 -----------------------------------------------------------~~~~~~~~~~~d~vi~~ag~~   97 (264)
T PRK12829         77 -----------------------------------------------------------FDTAVERFGGLDVLVNNAGIA   97 (264)
T ss_pred             -----------------------------------------------------------HHHHHHHhCCCCEEEECCCCC
Confidence                                                                       666666666677777777765


Q ss_pred             -ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 -QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 -~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                       ...+..+.+.++|++.+++|+.+++.+++.++|.|...+.++.++++||.++..+.+.++.|+++|
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K  164 (264)
T PRK12829         98 GPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASK  164 (264)
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHH
Confidence             445567788899999999999999999999999987655237899999999988889999999876

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.3e-21  Score=169.51  Aligned_cols=151  Identities=23%  Similarity=0.220  Sum_probs=118.0

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |+++||||++|||.+++++|+++|++|++++|+++ .++++.+   .   .+.++.++++|+++++++.+++        
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~---~~~~~~~~~~D~~~~~~~~~~~--------   67 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---Q---YNSNLTFHSLDLQDVHELETNF--------   67 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---c---cCCceEEEEecCCCHHHHHHHH--------
Confidence            68999999999999999999999999999999762 2222111   1   1245677788888887777774        


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccc--c--cEEEecccccc-
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGC--L--DILINNAGRSQ-  200 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~--l--dilVnnAG~~~-  200 (265)
                                                                            +++.+.++.  +  +++|+|||... 
T Consensus        68 ------------------------------------------------------~~~~~~~~~~~~~~~~~v~~ag~~~~   93 (251)
T PRK06924         68 ------------------------------------------------------NEILSSIQEDNVSSIHLINNAGMVAP   93 (251)
T ss_pred             ------------------------------------------------------HHHHHhcCcccCCceEEEEcceeccc
Confidence                                                                  444333321  1  26777777653 


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++++++.++|.|.+.+..|+||++||.++..+.+++..|+++|
T Consensus        94 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (251)
T PRK06924         94 IKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK  158 (251)
T ss_pred             CcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence            35678889999999999999999999999999998754358999999999999999999999987

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.4e-21  Score=167.54  Aligned_cols=142  Identities=29%  Similarity=0.337  Sum_probs=114.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.....            ..++.++++|++++            
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~------------~~~~~~~~~D~~~~------------   57 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL------------SGNFHFLQLDLSDD------------   57 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc------------CCcEEEEECChHHH------------
Confidence            477899999999999999999999999999999998753210            13466677777665            


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-c
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-R  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~  201 (265)
                                                                              ++++.+.++++|++|||||... .
T Consensus        58 --------------------------------------------------------~~~~~~~~~~id~lv~~ag~~~~~   81 (235)
T PRK06550         58 --------------------------------------------------------LEPLFDWVPSVDILCNTAGILDDY   81 (235)
T ss_pred             --------------------------------------------------------HHHHHHhhCCCCEEEECCCCCCCC
Confidence                                                                    1222334466777777776542 3


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||.++..+.+++..|+++|
T Consensus        82 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  144 (235)
T PRK06550         82 KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAGGGGAAYTASK  144 (235)
T ss_pred             CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcccHHHH
Confidence            5667788999999999999999999999999998765 68999999999999999999999987

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.87  E-value=3.6e-21  Score=165.86  Aligned_cols=154  Identities=28%  Similarity=0.335  Sum_probs=120.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |+++||||++|||.+++++|+++|++|++. .|+++..++....+...   +.++..+++|++|+++++++         
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~i~~~---------   69 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA---GGKAFVLQADISDENQVVAM---------   69 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC---CCeEEEEEccCCCHHHHHHH---------
Confidence            589999999999999999999999999875 56655555555544433   24566777788877777777         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-ccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-QRAAW  204 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-~~~~~  204 (265)
                                                                           ++++.++++++|++|||||.. ...++
T Consensus        70 -----------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~   96 (247)
T PRK09730         70 -----------------------------------------------------FTAIDQHDEPLAALVNNAGILFTQCTV   96 (247)
T ss_pred             -----------------------------------------------------HHHHHHhCCCCCEEEECCCCCCCCCcc
Confidence                                                                 666666666677777777764 33556


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc--CCceEEEEcccccccCCCC-CCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLARE--QGGHLVVTSSIAGIVGAPY-SGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~--~~g~IV~isS~ag~~~~~~-~~~Y~asK  265 (265)
                      .+.+.++|+..+++|+.+++++++.++|.|.++.  .+|++|++||.++..+.|+ +..|+++|
T Consensus        97 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         97 ENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            7788899999999999999999999999997653  2478999999998888776 46899887

>PRK09135 pteridine reductase; Provisional

Probab=99.87  E-value=2.9e-21  Score=166.48  Aligned_cols=158  Identities=23%  Similarity=0.216  Sum_probs=122.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..+.+++++||||+++||..++++|+++|++|++++|+.+ ..+.....+....  +....++.+|+++++++.++    
T Consensus         2 ~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~----   75 (249)
T PRK09135          2 MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR--PGSAAALQADLLDPDALPEL----   75 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc--CCceEEEEcCCCCHHHHHHH----
Confidence            3456799999999999999999999999999999998643 3333333332221  23455666666666666666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||...
T Consensus        76 ----------------------------------------------------------~~~~~~~~~~~d~vi~~ag~~~   97 (249)
T PRK09135         76 ----------------------------------------------------------VAACVAAFGRLDALVNNASSFY   97 (249)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666666777777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.+++++.+++|+.|++.+.+++.|.|.++  .|++++++|..+..+.++...|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Y~~sK  160 (249)
T PRK09135         98 PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITDIHAERPLKGYPVYCAAK  160 (249)
T ss_pred             CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeChhhcCCCCCchhHHHHH
Confidence            6666777788999999999999999999999998764  48999999988888888889999987

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=5.5e-21  Score=164.29  Aligned_cols=157  Identities=27%  Similarity=0.396  Sum_probs=124.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+.+|+++||||+++||.+++++|+++|++|+++.|+.+. .++..+++...   ..++..+.+|+++++++.++     
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~-----   73 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL---GGKALAVQGDVSDAESVERA-----   73 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHH-----
Confidence            3578999999999999999999999999999888876543 33333333221   24566666677776666666     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.++++|++||+||....
T Consensus        74 ---------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~   96 (248)
T PRK05557         74 ---------------------------------------------------------VDEAKAEFGGVDILVNNAGITRD   96 (248)
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCC
Confidence                                                                     66666667777888888877666


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+..+.+.+++++.+++|+.+++.+.+.+.|.+.+++ .++++++||.++..+.++...|+++|
T Consensus        97 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~~~~~~y~~sk  159 (248)
T PRK05557         97 NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGNPGQANYAASK  159 (248)
T ss_pred             CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCCCCCchhHHHH
Confidence            6667788899999999999999999999999997654 58999999999888888899999886

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.5e-21  Score=167.41  Aligned_cols=151  Identities=21%  Similarity=0.261  Sum_probs=122.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||++|||.+++++|+++|++|++++|+++..++..+.+.     ..++..+++|++|++++..+         
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~---------   67 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG-----DARFVPVACDLTDAASLAAA---------   67 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHH---------
Confidence            6899999999999999999999999999999998776665544331     23566778888887777777         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.++++++|++||++|.....++.
T Consensus        68 -----------------------------------------------------~~~~~~~~~~~d~vi~~ag~~~~~~~~   94 (257)
T PRK07074         68 -----------------------------------------------------LANAAAERGPVDVLVANAGAARAASLH   94 (257)
T ss_pred             -----------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCChh
Confidence                                                                 666666667777777777776666677


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.++++|++.+++|+.+++.+.++++|.|.+++ .|+||++||.++..+ ++.+.|++||
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~-~~~~~y~~sK  152 (257)
T PRK07074         95 DTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAA-LGHPAYSAAK  152 (257)
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCC-CCCcccHHHH
Confidence            788899999999999999999999999997665 689999999877543 4667898876

>KOG1611|consensus

Probab=99.87  E-value=3e-21  Score=161.49  Aligned_cols=158  Identities=23%  Similarity=0.264  Sum_probs=118.8

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHc-CCeEEEEec-CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKC-GAKLVLSAR-SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~-G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      |..|.++||||.+|||+.++++|.+. |-.+++..+ +++..   .+++........+++.+++|+++.++++.++++++
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~   77 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVE   77 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHH
Confidence            34577999999999999999999864 666666654 46554   33444443345899999999999999999977776


Q ss_pred             HHhC--CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         122 QQFG--CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       122 ~~~g--~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                      +-.|  .+|+||||||+..                                                             
T Consensus        78 ~iVg~~GlnlLinNaGi~~-------------------------------------------------------------   96 (249)
T KOG1611|consen   78 KIVGSDGLNLLINNAGIAL-------------------------------------------------------------   96 (249)
T ss_pred             hhcccCCceEEEeccceee-------------------------------------------------------------
Confidence            6643  4555555555322                                                             


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC----------CceEEEEcccccccCC---CCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ----------GGHLVVTSSIAGIVGA---PYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~----------~g~IV~isS~ag~~~~---~~~~~Y~asK  265 (265)
                      ...+..+.+.+.|.+.+++|..|+..++|+|+|++++...          +..|||+||.++.++.   ..+.+|.+||
T Consensus        97 ~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~~~~~~AYrmSK  175 (249)
T KOG1611|consen   97 SYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFRPGGLSAYRMSK  175 (249)
T ss_pred             ecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCCCCcchhhhHhhH
Confidence            2244556677899999999999999999999999987541          3489999999888753   3467899987

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.87  E-value=4.9e-21  Score=165.76  Aligned_cols=154  Identities=29%  Similarity=0.402  Sum_probs=126.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||+++||..++++|+++|++|++++|+.+..+++.+++...   +.++..+.+|+++++++.++         
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~---------   68 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA---GGSVIYLVADVTKEDEIADM---------   68 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEECCCCCHHHHHHH---------
Confidence            478999999999999999999999999999999877766665554432   24677778888888777777         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.+.++++|++|++||.....+..
T Consensus        69 -----------------------------------------------------~~~~~~~~~~~d~vi~~a~~~~~~~~~   95 (255)
T TIGR01963        69 -----------------------------------------------------IAAAAAEFGGLDILVNNAGIQHVAPIE   95 (255)
T ss_pred             -----------------------------------------------------HHHHHHhcCCCCEEEECCCCCCCCCcc
Confidence                                                                 555655566677777777766555666


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+++++++.+++|+.+++.+++.++|.|.+.+ .+++|++||.++..+.++++.|+++|
T Consensus        96 ~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~sk  154 (255)
T TIGR01963        96 EFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASPFKSAYVAAK  154 (255)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCCCCchhHHHH
Confidence            778899999999999999999999999997665 68999999999888888899999886

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=2.9e-21  Score=181.65  Aligned_cols=154  Identities=26%  Similarity=0.370  Sum_probs=122.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .++||+++||||++|||.+++++|+++|++|++++|+.. .+++.+...+.+     ...+.+|+++++++.++      
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~-~~~l~~~~~~~~-----~~~~~~Dv~~~~~~~~~------  274 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA-GEALAAVANRVG-----GTALALDITAPDAPARI------  274 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHcC-----CeEEEEeCCCHHHHHHH------
Confidence            467999999999999999999999999999999987432 222222222221     23456676666666666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++.+.++++++|++|||||.....
T Consensus       275 --------------------------------------------------------~~~~~~~~g~id~vi~~AG~~~~~  298 (450)
T PRK08261        275 --------------------------------------------------------AEHLAERHGGLDIVVHNAGITRDK  298 (450)
T ss_pred             --------------------------------------------------------HHHHHHhCCCCCEEEECCCcCCCC
Confidence                                                                    666666777777777777777667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.+++++.+.+.|.+..++ +|+||++||.++..+.++++.|+++|
T Consensus       299 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~g~iv~~SS~~~~~g~~~~~~Y~asK  360 (450)
T PRK08261        299 TLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD-GGRIVGVSSISGIAGNRGQTNYAASK  360 (450)
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCCChHHHHHH
Confidence            788899999999999999999999999999765544 69999999999999999999999887

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.5e-21  Score=165.77  Aligned_cols=137  Identities=17%  Similarity=0.196  Sum_probs=103.5

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      .++||||++|||++++++|+++|++|++++|++++++++.+.+        +...+++|++|+++++++++.+.   ++ 
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~v~~~~~~~~---~~-   69 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL--------DVDAIVCDNTDPASLEEARGLFP---HH-   69 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--------cCcEEecCCCCHHHHHHHHHHHh---hc-
Confidence            4899999999999999999999999999999876665544332        24467788888888777744332   13 


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc------c
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ------R  201 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~------~  201 (265)
                                                                                   +|++|||||...      .
T Consensus        70 -------------------------------------------------------------id~lv~~ag~~~~~~~~~~   88 (223)
T PRK05884         70 -------------------------------------------------------------LDTIVNVPAPSWDAGDPRT   88 (223)
T ss_pred             -------------------------------------------------------------CcEEEECCCccccCCCCcc
Confidence                                                                         455555554321      1


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+ +.++|++++++|+.++++++|+++|.|.+   +|+||++||.+    .+..++|++||
T Consensus        89 ~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~----~~~~~~Y~asK  144 (223)
T PRK05884         89 YSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPEN----PPAGSAEAAIK  144 (223)
T ss_pred             cchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCC----CCCccccHHHH
Confidence            12334 46899999999999999999999999953   48999999976    35678899988

>PRK08264 short chain dehydrogenase; Validated

Probab=99.86  E-value=3.8e-21  Score=165.24  Aligned_cols=147  Identities=29%  Similarity=0.360  Sum_probs=122.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++.+|+++||||++|||.++|++|+++|+ +|++++|+.+.+++          .+.++.++.+|++|.+++.++    
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~----   67 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----------LGPRVVPLQLDVTDPASVAAA----   67 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----------cCCceEEEEecCCCHHHHHHH----
Confidence            457889999999999999999999999999 99999998765433          124677788888888776655    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc-c
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR-S  199 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~-~  199 (265)
                                                                                ++    ..+++|++||+||. .
T Consensus        68 ----------------------------------------------------------~~----~~~~id~vi~~ag~~~   85 (238)
T PRK08264         68 ----------------------------------------------------------AE----AASDVTILVNNAGIFR   85 (238)
T ss_pred             ----------------------------------------------------------HH----hcCCCCEEEECCCcCC
Confidence                                                                      32    23567888888887 4


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.+++.+++++.|.|++++ .+++|++||..+..+.++...|+++|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~sK  150 (238)
T PRK08264         86 TGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFPNLGTYSASK  150 (238)
T ss_pred             CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCCCchHhHHHH
Confidence            556778889999999999999999999999999998765 78999999999998888889998876

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=6.4e-21  Score=163.80  Aligned_cols=158  Identities=28%  Similarity=0.435  Sum_probs=125.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..++.|+++||||+++||.+++++|+++|++|++..|+.+. .+...+.....   +.++.++.+|+++++++.++    
T Consensus         2 ~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~----   74 (249)
T PRK12825          2 GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL---GRRAQAVQADVTDKAALEAA----   74 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc---CCceEEEECCcCCHHHHHHH----
Confidence            45667899999999999999999999999998887665433 33333333222   24566667777777666666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.++.+|++||+||...
T Consensus        75 ----------------------------------------------------------~~~~~~~~~~id~vi~~ag~~~   96 (249)
T PRK12825         75 ----------------------------------------------------------VAAAVERFGRIDILVNNAGIFE   96 (249)
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCccCC
Confidence                                                                      6666666777888888888766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++.+++.+.|.+.+.+ .+++|++||..+..+.++...|+.+|
T Consensus        97 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~~~~~y~~sK  160 (249)
T PRK12825         97 DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWPGRSNYAAAK  160 (249)
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCCCchHHHHHH
Confidence            67777888999999999999999999999999997765 68999999999988888888898876

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.7e-21  Score=165.08  Aligned_cols=149  Identities=32%  Similarity=0.409  Sum_probs=120.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++|+++||||++|||..+++.|+++|++|++++|+++..++..+.   .     ...++.+|+++++++.++      
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~---~-----~~~~~~~D~~~~~~v~~~------   71 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE---T-----GCEPLRLDVGDDAAIRAA------   71 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---h-----CCeEEEecCCCHHHHHHH------
Confidence            57899999999999999999999999999999999987655443322   1     234567788877765555      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++.    ++++|++|||||.....
T Consensus        72 --------------------------------------------------------~~~----~~~~d~vi~~ag~~~~~   91 (245)
T PRK07060         72 --------------------------------------------------------LAA----AGAFDGLVNCAGIASLE   91 (245)
T ss_pred             --------------------------------------------------------HHH----hCCCCEEEECCCCCCCC
Confidence                                                                    332    45677888888776666


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +..+.+.++|++.+++|+.+++.+++.+.|.+.+++..|+||++||.++..+.+..+.|++||
T Consensus        92 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK  154 (245)
T PRK07060         92 SALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASK  154 (245)
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHH
Confidence            667788899999999999999999999999987654348999999999999989999999987

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.9e-21  Score=165.95  Aligned_cols=147  Identities=22%  Similarity=0.215  Sum_probs=117.6

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      +++||||++|||.+++++|+++|++|++++|+.+..  +   ..   ..+.++.++++|++++++++++           
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~---~~~~~~~~~~~D~~~~~~~~~~-----------   63 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AA---AAGERLAEVELDLSDAAAAAAW-----------   63 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hh---ccCCeEEEEEeccCCHHHHHHH-----------
Confidence            699999999999999999999999999999976531  1   11   1134677778888888777776           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHH-HHhhc---ccccEEEeccccccc-c
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDA-VIQQF---GCLDILINNAGRSQR-A  202 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~-i~~~~---g~ldilVnnAG~~~~-~  202 (265)
                                                                         +++ +.+.+   +++|++|||||.... .
T Consensus        64 ---------------------------------------------------~~~~~~~~~~~~~~~~~~v~~ag~~~~~~   92 (243)
T PRK07023         64 ---------------------------------------------------LAGDLLAAFVDGASRVLLINNAGTVEPIG   92 (243)
T ss_pred             ---------------------------------------------------HHHHHHHHhccCCCceEEEEcCcccCCCC
Confidence                                                               333 22222   367777777776543 5


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .|+||++||.++..+.++++.|++||
T Consensus        93 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  154 (243)
T PRK07023         93 PLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNAYAGWSVYCATK  154 (243)
T ss_pred             ccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCCCCCchHHHHHH
Confidence            677788999999999999999999999999998754 68999999999999999999999987

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.2e-21  Score=161.10  Aligned_cols=128  Identities=25%  Similarity=0.333  Sum_probs=109.1

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      +++||||++|||++++++|+++ ++|++++|+..                    .++||++++++++++           
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------------~~~~D~~~~~~~~~~-----------   49 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------------DVQVDITDPASIRAL-----------   49 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------------ceEecCCChHHHHHH-----------
Confidence            6899999999999999999999 99999998642                    257888888776666           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         +++    .+++|++|||||.....++.+.
T Consensus        50 ---------------------------------------------------~~~----~~~id~lv~~ag~~~~~~~~~~   74 (199)
T PRK07578         50 ---------------------------------------------------FEK----VGKVDAVVSAAGKVHFAPLAEM   74 (199)
T ss_pred             ---------------------------------------------------HHh----cCCCCEEEECCCCCCCCchhhC
Confidence                                                               332    3567777777777666677788


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++++|++.+++|+.+++++++++.|.|.+   +|+|+++||..+..+.|+++.|++||
T Consensus        75 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~Y~~sK  129 (199)
T PRK07578         75 TDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSDEPIPGGASAATVN  129 (199)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccCCCCCCchHHHHHH
Confidence            99999999999999999999999999963   48999999999999999999999987

>PRK08017 oxidoreductase; Provisional

Probab=99.85  E-value=1.1e-20  Score=163.85  Aligned_cols=148  Identities=29%  Similarity=0.417  Sum_probs=121.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      .|+++||||++|||.+++++|+++|++|++++|+.++++.+.+         ..+..+.+|++|.+++..+         
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~---------   63 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS---------LGFTGILLDLDDPESVERA---------   63 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh---------CCCeEEEeecCCHHHHHHH---------
Confidence            3789999999999999999999999999999998765543321         1245677788877776666         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc-ccccEEEecccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAW  204 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~-g~ldilVnnAG~~~~~~~  204 (265)
                                                                           ++.+.+.. +++|.++||+|.....+.
T Consensus        64 -----------------------------------------------------~~~i~~~~~~~~~~ii~~ag~~~~~~~   90 (256)
T PRK08017         64 -----------------------------------------------------ADEVIALTDNRLYGLFNNAGFGVYGPL   90 (256)
T ss_pred             -----------------------------------------------------HHHHHHhcCCCCeEEEECCCCCCccch
Confidence                                                                 55544432 567888888887666677


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.+.+++++.+++|+.|++.+++.++|.|.+.+ .|+||++||.++..+.++.+.|++||
T Consensus        91 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK  150 (256)
T PRK08017         91 STISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLISTPGRGAYAASK  150 (256)
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCCCCccHHHHHH
Confidence            7888999999999999999999999999998765 68999999999999999999999887

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.85  E-value=1.9e-20  Score=160.42  Aligned_cols=151  Identities=26%  Similarity=0.409  Sum_probs=119.5

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      ++|||++++||..++++|+++|++|++++|+. +..++..+.+...   +.++..+.+|++|+++++++           
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~-----------   66 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY---GVKALGVVCDVSDREDVKAV-----------   66 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHH-----------
Confidence            58999999999999999999999999998875 3333333333222   23566666777766666666           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         ++.+.++++++|++||++|.....+..+.
T Consensus        67 ---------------------------------------------------~~~~~~~~~~id~vi~~ag~~~~~~~~~~   95 (239)
T TIGR01830        67 ---------------------------------------------------VEEIEEELGPIDILVNNAGITRDNLLMRM   95 (239)
T ss_pred             ---------------------------------------------------HHHHHHHhCCCCEEEECCCCCCCCChhhC
Confidence                                                               66666666777777777776655566677


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+++++.+++|+.+++++++.+.|.+.+.+ .++++++||.++..+.+.++.|+++|
T Consensus        96 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g~~~~~~y~~~k  152 (239)
T TIGR01830        96 KEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMGNAGQANYAASK  152 (239)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCCchhHHHH
Confidence            8889999999999999999999999987654 68999999999999999999999886

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.3e-20  Score=161.36  Aligned_cols=143  Identities=25%  Similarity=0.343  Sum_probs=116.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |.+|+++||||++|||.+++++|+++|++|++++|+.+..         .     ...++.+|++|+++++++       
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~-----~~~~~~~D~~~~~~~~~~-------   59 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------F-----PGELFACDLADIEQTAAT-------   59 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------c-----CceEEEeeCCCHHHHHHH-------
Confidence            4579999999999999999999999999999999976530         0     113567777777777766       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.+++ ++|++|||||.....+
T Consensus        60 -------------------------------------------------------~~~~~~~~-~~d~vi~~ag~~~~~~   83 (234)
T PRK07577         60 -------------------------------------------------------LAQINEIH-PVDAIVNNVGIALPQP   83 (234)
T ss_pred             -------------------------------------------------------HHHHHHhC-CCcEEEECCCCCCCCC
Confidence                                                                   56555554 4788888888776677


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++.+++|+.+++.+++.++|.|++++ .|+||++||.+ ..+.++.+.|++||
T Consensus        84 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~-~~~~~~~~~Y~~sK  143 (234)
T PRK07577         84 LGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRA-IFGALDRTSYSAAK  143 (234)
T ss_pred             hHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccc-ccCCCCchHHHHHH
Confidence            77888999999999999999999999999998765 68999999985 45677888999887

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.4e-20  Score=161.25  Aligned_cols=150  Identities=23%  Similarity=0.237  Sum_probs=108.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++++|+++||||++|||.+++++|+++|++|++.+|+.+ ..+.+...+...   +.++.++.+|+++++++.++    
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~----   74 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA---GGRASAVGADLTDEESVAAL----   74 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHH----
Confidence            4578999999999999999999999999999999998753 344444444332   24566777888888777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||...
T Consensus        75 ----------------------------------------------------------~~~~~~~~~~~d~vi~~ag~~~   96 (248)
T PRK07806         75 ----------------------------------------------------------MDTAREEFGGLDALVLNASGGM   96 (248)
T ss_pred             ----------------------------------------------------------HHHHHHhCCCCcEEEECCCCCC
Confidence                                                                      4555555555666666655421


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-----cCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-----VGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-----~~~~~~~~Y~asK  265 (265)
                      ..      ..++++.+++|+.+++++++.+.|.|.+   +|++|++||..+.     .+.|.++.|++||
T Consensus        97 ~~------~~~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK  157 (248)
T PRK07806         97 ES------GMDEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIPTVKTMPEYEPVARSK  157 (248)
T ss_pred             CC------CCCcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCccccCCccccHHHHHH
Confidence            11      1134678899999999999999999853   4799999996553     2335567888887

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.1e-20  Score=158.77  Aligned_cols=145  Identities=21%  Similarity=0.206  Sum_probs=112.5

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||.+++++|+++|++|++++|+++..+++.+    .    .+..+..+|++|+++++++          
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~----~~~~~~~~D~~d~~~~~~~----------   63 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA----L----PGVHIEKLDMNDPASLDQL----------   63 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh----c----cccceEEcCCCCHHHHHHH----------
Confidence            689999999999999999999999999999999876554322    1    2345566777777776666          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc--ccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR--AAW  204 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~--~~~  204 (265)
                                                                          ++.+.+  +++|++|||||....  .++
T Consensus        64 ----------------------------------------------------~~~~~~--~~id~vi~~ag~~~~~~~~~   89 (225)
T PRK08177         64 ----------------------------------------------------LQRLQG--QRFDLLFVNAGISGPAHQSA   89 (225)
T ss_pred             ----------------------------------------------------HHHhhc--CCCCEEEEcCcccCCCCCCc
Confidence                                                                444432  357777777776532  456


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC---CCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA---PYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~---~~~~~Y~asK  265 (265)
                      .+.+.+++++.+++|+.+++++++.+.|.|.+.  .|+++++||..|..+.   +++..|+++|
T Consensus        90 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK  151 (225)
T PRK08177         90 ADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVELPDGGEMPLYKASK  151 (225)
T ss_pred             ccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCccccccCCCCCccchHHHH
Confidence            778889999999999999999999999998643  4899999998887643   3567899887

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.84  E-value=4.1e-20  Score=149.96  Aligned_cols=152  Identities=24%  Similarity=0.283  Sum_probs=115.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |+++||||++|||.+++++|+++|+ .|++++|+++..+.....+.+....+.++.++.+|+++++++.++         
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---------   71 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAA---------   71 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH---------
Confidence            5789999999999999999999997 588888876554433221222222234555666666666665555         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++...++++|.+|||||.....+..
T Consensus        72 -----------------------------------------------------~~~~~~~~~~id~li~~ag~~~~~~~~   98 (180)
T smart00822       72 -----------------------------------------------------LAAIPARLGPLRGVIHAAGVLDDGLLA   98 (180)
T ss_pred             -----------------------------------------------------HHHHHHHcCCeeEEEEccccCCccccc
Confidence                                                                 666666677778888888776666677


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+++++.+++|+.+++++.+.+.+    .+ .++++++||.++..+.++...|+++|
T Consensus        99 ~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~ii~~ss~~~~~~~~~~~~y~~sk  153 (180)
T smart00822       99 NLTPERFAAVLAPKVDGAWNLHELTRD----LP-LDFFVLFSSVAGVLGNPGQANYAAAN  153 (180)
T ss_pred             cCCHHHHHHhhchHhHHHHHHHHHhcc----CC-cceEEEEccHHHhcCCCCchhhHHHH
Confidence            888899999999999999999998733    22 58999999999999989999998876

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.7e-20  Score=159.13  Aligned_cols=141  Identities=21%  Similarity=0.268  Sum_probs=112.8

Q ss_pred             EEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccE
Q psy9256          50 WITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDI  129 (265)
Q Consensus        50 lItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldi  129 (265)
                      +||||++|||.+++++|+++|++|++++|+++..++..+.+.    .+.++.++.+|+++++++.++             
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~-------------   63 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG----GGAPVRTAALDITDEAAVDAF-------------   63 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCCceEEEEccCCCHHHHHHH-------------
Confidence            599999999999999999999999999998766555444332    124566777787777776655             


Q ss_pred             EEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccccch
Q psy9256         130 LINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIEL  209 (265)
Q Consensus       130 linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~~  209 (265)
                                                                       +++    .+++|++|||+|.....++.+.+.
T Consensus        64 -------------------------------------------------~~~----~~~id~li~~ag~~~~~~~~~~~~   90 (230)
T PRK07041         64 -------------------------------------------------FAE----AGPFDHVVITAADTPGGPVRALPL   90 (230)
T ss_pred             -------------------------------------------------HHh----cCCCCEEEECCCCCCCCChhhCCH
Confidence                                                             433    367778888887766667778889


Q ss_pred             HHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         210 EVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       210 ~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++|++++++|+.+++++++  .+.|.  + .|+||++||.++..+.|..+.|++||
T Consensus        91 ~~~~~~~~~n~~~~~~l~~--~~~~~--~-~g~iv~~ss~~~~~~~~~~~~Y~~sK  141 (230)
T PRK07041         91 AAAQAAMDSKFWGAYRVAR--AARIA--P-GGSLTFVSGFAAVRPSASGVLQGAIN  141 (230)
T ss_pred             HHHHHHHHHHHHHHHHHHh--hhhhc--C-CeEEEEECchhhcCCCCcchHHHHHH
Confidence            9999999999999999999  45552  2 58999999999999989999999887

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=7.4e-20  Score=157.07  Aligned_cols=152  Identities=24%  Similarity=0.308  Sum_probs=116.3

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++|+++||||++|||.++++.|+++|++|++++|+++..+++.+.+...    .++..+++|+++++++.++      
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~------   71 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY----GNIHYVVGDVSSTESARNV------   71 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCeEEEECCCCCHHHHHHH------
Confidence            367899999999999999999999999999999999877666554443321    2466777888887777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+.++++|.+++++|.....
T Consensus        72 --------------------------------------------------------~~~~~~~~~~id~ii~~ag~~~~~   95 (238)
T PRK05786         72 --------------------------------------------------------IEKAAKVLNAIDGLVVTVGGYVED   95 (238)
T ss_pred             --------------------------------------------------------HHHHHHHhCCCCEEEEcCCCcCCC
Confidence                                                                    555555556666666666654333


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-CCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-GAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-~~~~~~~Y~asK  265 (265)
                      +..+  .+++++++++|+.+++++.+.++|.|.+   +|++|++||.++.. +.+....|++||
T Consensus        96 ~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~~~~~~~Y~~sK  154 (238)
T PRK05786         96 TVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIYKASPDQLSYAVAK  154 (238)
T ss_pred             chHH--HHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcccCCCCchHHHHHH
Confidence            3322  3889999999999999999999999853   48999999987754 556778899886

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.83  E-value=7.9e-20  Score=156.86  Aligned_cols=147  Identities=23%  Similarity=0.232  Sum_probs=104.7

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          47 KVVWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ++++||||++|||++++++|+++|  ..|+...|+....         .  ...++.++++|++++++++++    .+.+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---------~--~~~~~~~~~~Dls~~~~~~~~----~~~~   65 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---------F--QHDNVQWHALDVTDEAEIKQL----SEQF   65 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---------c--ccCceEEEEecCCCHHHHHHH----HHhc
Confidence            479999999999999999999985  5666656644221         0  124677788888888876654    2334


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                      +++|++|||||+....                                                        +.....++
T Consensus        66 ~~id~li~~aG~~~~~--------------------------------------------------------~~~~~~~~   89 (235)
T PRK09009         66 TQLDWLINCVGMLHTQ--------------------------------------------------------DKGPEKSL   89 (235)
T ss_pred             CCCCEEEECCcccccc--------------------------------------------------------ccCccccc
Confidence            4555555555521110                                                        00012356


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC---CCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG---APYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~---~~~~~~Y~asK  265 (265)
                      ++.+.++|++.+++|+.+++.+++.++|.|.+++ .|+++++||..+..+   .+++..|++||
T Consensus        90 ~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~~~~~~~~Y~asK  152 (235)
T PRK09009         90 QALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDNRLGGWYSYRASK  152 (235)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccCCCCCcchhhhhH
Confidence            7788899999999999999999999999997664 589999999776542   46678999987

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.83  E-value=6.4e-20  Score=169.77  Aligned_cols=143  Identities=27%  Similarity=0.260  Sum_probs=103.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .++||+++||||++|||.+++++|+++|++|++++|+++++++.   ....   ..+...+.+|++|++++.+.      
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~---~~~v~~v~~Dvsd~~~v~~~------  242 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGE---DLPVKTLHWQVGQEAALAEL------  242 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---Hhhc---CCCeEEEEeeCCCHHHHHHH------
Confidence            46799999999999999999999999999999999876544322   1111   12355677788776654332      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                                     ++++|++|||||.... 
T Consensus       243 ---------------------------------------------------------------l~~IDiLInnAGi~~~-  258 (406)
T PRK07424        243 ---------------------------------------------------------------LEKVDILIINHGINVH-  258 (406)
T ss_pred             ---------------------------------------------------------------hCCCCEEEECCCcCCC-
Confidence                                                                           2345666666654322 


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC---CceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ---GGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~---~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                        .+.+.+++++++++|+.|++++++.++|.|++++.   ++.+|++|| ++ .+.+..+.|++||
T Consensus       259 --~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ASK  320 (406)
T PRK07424        259 --GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELSK  320 (406)
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHHH
Confidence              35678899999999999999999999999987642   245666654 44 3445667899998

>PRK06720 hypothetical protein; Provisional

Probab=99.82  E-value=5.9e-19  Score=145.16  Aligned_cols=143  Identities=19%  Similarity=0.228  Sum_probs=105.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .++||+++||||++|||.+++++|++.|++|++++|+.+.+++..+++...   +.+..++.+|+++++++.++      
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~------   83 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL---GGEALFVSYDMEKQGDWQRV------   83 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHH------
Confidence            478999999999999999999999999999999999877766665555432   23556677788877777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc-
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~-  201 (265)
                                                                              ++++.+.+|++|++|||||.... 
T Consensus        84 --------------------------------------------------------v~~~~~~~G~iDilVnnAG~~~~~  107 (169)
T PRK06720         84 --------------------------------------------------------ISITLNAFSRIDMLFQNAGLYKID  107 (169)
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCCC
Confidence                                                                    55555555666666666665543 


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc------CCceEEEEccccccc
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE------QGGHLVVTSSIAGIV  253 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~------~~g~IV~isS~ag~~  253 (265)
                      .++.+.+.+++.   .+|+.++++.++.+.++|.+++      +.|++..+||.+..+
T Consensus       108 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720        108 SIFSRQQENDSN---VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             CcccccchhHhh---ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            334444544533   7788888999999999988764      257888888876654

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3e-19  Score=152.34  Aligned_cols=144  Identities=27%  Similarity=0.267  Sum_probs=109.8

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||.+++++|+++|++|++++|+++..+++..    .     .+.++.+|+++.++++++          
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~-----~~~~~~~D~~~~~~v~~~----------   62 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----L-----GAEALALDVADPASVAGL----------   62 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c-----cceEEEecCCCHHHHHHH----------
Confidence            579999999999999999999999999999998665543321    1     234677888887776666          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc--cccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ--RAAW  204 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~--~~~~  204 (265)
                                                                          ++++..  +++|++|||+|...  ..+.
T Consensus        63 ----------------------------------------------------~~~~~~--~~~d~vi~~ag~~~~~~~~~   88 (222)
T PRK06953         63 ----------------------------------------------------AWKLDG--EALDAAVYVAGVYGPRTEGV   88 (222)
T ss_pred             ----------------------------------------------------HHHhcC--CCCCEEEECCCcccCCCCCc
Confidence                                                                333321  35777777777652  2445


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCC---CccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS---GSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~---~~Y~asK  265 (265)
                      .+.+.++|++.+++|+.+++.+++.+.|.|.++  .|+++++||.++..+....   ..|+++|
T Consensus        89 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~~~Y~~sK  150 (222)
T PRK06953         89 EPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGDATGTTGWLYRASK  150 (222)
T ss_pred             ccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCcccccccccCCCccccHHhH
Confidence            677899999999999999999999999998653  5899999998887664332   2599887

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.81  E-value=1.6e-19  Score=195.09  Aligned_cols=180  Identities=22%  Similarity=0.178  Sum_probs=132.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCC-----------cHHHHHHHHHH-hCCCCCcEEEEee-----c
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKC-GAKLVLSARSSS-----------NLERVKNLCVQ-AGAHPQSIYTLTL-----D  106 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~-----------~~~~~~~~~~~-~~~~~~~~~~~~~-----D  106 (265)
                      +|+++|||||++|||.++|++|+++ |++|++++|+..           ..++++....+ ....+.+......     .
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999987 799999999831           01111111110 0111111111111     1


Q ss_pred             CCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc
Q psy9256         107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF  186 (265)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~  186 (265)
                      +.....+.+..+                                 ++  ...+.++.++.||++|.++++++++++.++ 
T Consensus      2076 ~~~~~ei~~~la---------------------------------~l--~~~G~~v~y~~~DVtD~~av~~av~~v~~~- 2119 (2582)
T TIGR02813      2076 VLSSLEIAQALA---------------------------------AF--KAAGASAEYASADVTNSVSVAATVQPLNKT- 2119 (2582)
T ss_pred             cchhHHHHHHHH---------------------------------HH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            111111111111                                 11  122467889999999999999999999887 


Q ss_pred             ccccEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         187 GCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       187 g~ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++|++|||||+...+.+.+.+.++|+++|++|+.|.+++.+++.+.+     .++||++||++|..+.++++.|+++|
T Consensus      2120 g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~-----~~~IV~~SSvag~~G~~gqs~YaaAk 2193 (2582)
T TIGR02813      2120 LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAEN-----IKLLALFSSAAGFYGNTGQSDYAMSN 2193 (2582)
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEEechhhcCCCCCcHHHHHHH
Confidence            789999999999888899999999999999999999999998887754     36899999999999999999999986

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1478|consensus

Probab=99.80  E-value=8.6e-19  Score=148.80  Aligned_cols=185  Identities=23%  Similarity=0.197  Sum_probs=139.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-----eEEEEecCCCcHHHHHHHHHHhCC-CCCcEEEEeecCCChHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-----KLVLSARSSSNLERVKNLCVQAGA-HPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-----~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ..|+++|||+++|||++++++|.++..     ++++++|+.++.+++-+.+.+... ...++.++.+|+++..|+.+...
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            468999999999999999999998654     478889999999999988887664 36789999999999999999999


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                      .++.++.++|-+.-|||+....-.                               +..+++-.+..  .++-.+.+.+-.
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi-------------------------------~w~~avf~~fs--npv~amt~pt~~  128 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGI-------------------------------NWKAAVFGLFS--NPVIAMTSPTEG  128 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcc-------------------------------cHHHHHHHHhh--chhHHhcCchhh
Confidence            999999999999999998643210                               01111111111  122222222211


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC---------CCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA---------PYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~---------~~~~~Y~asK  265 (265)
                      .  ......+.+++.++|++|++|+|++.+.+.|++..+. ...+|.+||..+....         -+..+|+.||
T Consensus       129 ~--~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~-~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSK  201 (341)
T KOG1478|consen  129 L--LTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSD-NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSK  201 (341)
T ss_pred             h--hhcceecccchhhHhhhcccchhhhHhhhhhHhhcCC-CCeEEEEeecccccccCCHHHHhhhcCCCCcchhH
Confidence            1  1123577889999999999999999999999998765 4599999998876532         3556788876

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.1e-18  Score=148.34  Aligned_cols=144  Identities=28%  Similarity=0.407  Sum_probs=116.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      .|+++||||+++||..+++.|+++ ++|++++|+.+..++..+..       .++.++.+|++|++++.++         
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~---------   65 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-------PGATPFPVDLTDPEAIAAA---------   65 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-------ccceEEecCCCCHHHHHHH---------
Confidence            578999999999999999999999 99999999865544333211       2356677888877765555         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++.    .+++|++||++|.....+..
T Consensus        66 -----------------------------------------------------~~~----~~~id~vi~~ag~~~~~~~~   88 (227)
T PRK08219         66 -----------------------------------------------------VEQ----LGRLDVLVHNAGVADLGPVA   88 (227)
T ss_pred             -----------------------------------------------------HHh----cCCCCEEEECCCcCCCCCcc
Confidence                                                                 332    34678888888876666677


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.++++|.+.+++|+.+++.+++.+++.|.++  .+++|++||.++..+.++...|+++|
T Consensus        89 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~~~~~~y~~~K  146 (227)
T PRK08219         89 ESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRANPGWGSYAASK  146 (227)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcCCCCchHHHHH
Confidence            78899999999999999999999999998765  48999999999988888889998876

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.77  E-value=1.5e-18  Score=144.28  Aligned_cols=147  Identities=25%  Similarity=0.323  Sum_probs=103.9

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCC---cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGA-KLVLSARSSS---NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +++||||.+|||..+++.|+++|+ +|++++|+..   ..++..+++.+.   +.++.+++||++|++++.         
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~---g~~v~~~~~Dv~d~~~v~---------   69 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA---GARVEYVQCDVTDPEAVA---------   69 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT---T-EEEEEE--TTSHHHHH---------
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC---CCceeeeccCccCHHHHH---------
Confidence            689999999999999999999875 6999999832   222233333332   245555555555555544         


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                           ++++++.++++++|.+||.||.....+
T Consensus        70 -----------------------------------------------------~~~~~~~~~~~~i~gVih~ag~~~~~~   96 (181)
T PF08659_consen   70 -----------------------------------------------------AALAQLRQRFGPIDGVIHAAGVLADAP   96 (181)
T ss_dssp             -----------------------------------------------------HHHHTSHTTSS-EEEEEE-------B-
T ss_pred             -----------------------------------------------------HHHHHHHhccCCcceeeeeeeeecccc
Confidence                                                                 448888888899999999999998899


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDH  264 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~as  264 (265)
                      +.+.++++++++++.++.|...+.+.+.+    . +...+|.+||+++..|.++++.|+++
T Consensus        97 ~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~-~l~~~i~~SSis~~~G~~gq~~YaaA  152 (181)
T PF08659_consen   97 IQDQTPDEFDAVLAPKVRGLWNLHEALEN----R-PLDFFILFSSISSLLGGPGQSAYAAA  152 (181)
T ss_dssp             GCC--HHHHHHHHHHHHHHHHHHHHHHTT----T-TTSEEEEEEEHHHHTT-TTBHHHHHH
T ss_pred             cccCCHHHHHHHHhhhhhHHHHHHHHhhc----C-CCCeEEEECChhHhccCcchHhHHHH
Confidence            99999999999999999999999887755    2 24799999999999999999999863

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1204|consensus

Probab=99.72  E-value=2.3e-18  Score=144.21  Aligned_cols=157  Identities=22%  Similarity=0.192  Sum_probs=111.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ...+|++++||+|+|||..++..+..++......++.+...+            ...+.+..+|...             
T Consensus         3 ~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~------------~~~L~v~~gd~~v-------------   57 (253)
T KOG1204|consen    3 LNMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE------------LEGLKVAYGDDFV-------------   57 (253)
T ss_pred             cccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc------------ccceEEEecCCcc-------------
Confidence            346789999999999999998888877655433333222221            1122222222221             


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc-
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~-  201 (265)
                                                               ....|++...-..++++..++.+|+.|++|||||...+ 
T Consensus        58 -----------------------------------------~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdv   96 (253)
T KOG1204|consen   58 -----------------------------------------HVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDV   96 (253)
T ss_pred             -----------------------------------------eechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccch
Confidence                                                     11123333344444466666777777777888776544 


Q ss_pred             cc--ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AA--WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..  .+..+.++|++.++.|+++++.+.+.++|.++++...|.+||+||.++..|++.|+.||.+|
T Consensus        97 sk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~K  162 (253)
T KOG1204|consen   97 SKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSK  162 (253)
T ss_pred             hhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhH
Confidence            22  23677889999999999999999999999999875469999999999999999999999987

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.68  E-value=6.4e-16  Score=129.82  Aligned_cols=155  Identities=20%  Similarity=0.269  Sum_probs=123.1

Q ss_pred             cccCCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..|+||+.+|+|-.+  +|+..||+.+.++|+.++++...+.-..++.+..++.+    ...+++||+++.++++++   
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~----s~~v~~cDV~~d~~i~~~---   74 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELG----SDLVLPCDVTNDESIDAL---   74 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhcc----CCeEEecCCCCHHHHHHH---
Confidence            468999999999865  89999999999999999999887733333333333332    345677777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.++||.+|.+||+-|+.
T Consensus        75 -----------------------------------------------------------f~~i~~~~g~lD~lVHsIaFa   95 (259)
T COG0623          75 -----------------------------------------------------------FATIKKKWGKLDGLVHSIAFA   95 (259)
T ss_pred             -----------------------------------------------------------HHHHHHhhCcccEEEEEeccC
Confidence                                                                       777777778888888887776


Q ss_pred             cc----ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QR----AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.    +.+.+++.+.|...+++-..+...+++++.|+|..   +|+|+.+|-..+....|++-.-+..|
T Consensus        96 ~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---ggSiltLtYlgs~r~vPnYNvMGvAK  162 (259)
T COG0623          96 PKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---GGSILTLTYLGSERVVPNYNVMGVAK  162 (259)
T ss_pred             ChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---CCcEEEEEeccceeecCCCchhHHHH
Confidence            52    56778999999999999999999999999999964   69999999999988888876655544

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.61  E-value=7.2e-15  Score=132.25  Aligned_cols=131  Identities=18%  Similarity=0.217  Sum_probs=95.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .||+++||||+++||..++++|+++|++|+++.|+.+..++...... ......++.++.+|+++++++.++        
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~--------   74 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLA-LDGAKERLKLFKADLLDEGSFELA--------   74 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHh-ccCCCCceEEEeCCCCCchHHHHH--------
Confidence            37899999999999999999999999999999888766544322221 111124566777788777665554        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++       ++|++||+||...    
T Consensus        75 ------------------------------------------------------~~-------~~d~vih~A~~~~----   89 (325)
T PLN02989         75 ------------------------------------------------------ID-------GCETVFHTASPVA----   89 (325)
T ss_pred             ------------------------------------------------------Hc-------CCCEEEEeCCCCC----
Confidence                                                                  32       3677777777432    


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      ...+.+++.+.+++|+.+++.+++++.+.+   + .++||++||.++..
T Consensus        90 ~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~-~~~iv~~SS~~~~~  134 (325)
T PLN02989         90 ITVKTDPQVELINPAVNGTINVLRTCTKVS---S-VKRVILTSSMAAVL  134 (325)
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHcC---C-ceEEEEecchhhee
Confidence            123345678999999999999999988753   1 47999999987653

>PRK06484 short chain dehydrogenase; Validated

Probab=99.60  E-value=1.2e-14  Score=138.86  Aligned_cols=106  Identities=28%  Similarity=0.419  Sum_probs=95.7

Q ss_pred             CceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc--cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh
Q psy9256         160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ--RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAR  237 (265)
Q Consensus       160 ~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~  237 (265)
                      .++..+.+|++|+++++++++++.++++++|++|||||...  ..++.+.+.++|++++++|+.++++++++++|+|+++
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  130 (520)
T PRK06484         51 PDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQ  130 (520)
T ss_pred             CceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            35667899999999999999999999999999999999843  3567889999999999999999999999999999876


Q ss_pred             cCCceEEEEcccccccCCCCCCccccCC
Q psy9256         238 EQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       238 ~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+++||++||.++..+.+++++|++||
T Consensus       131 ~~g~~iv~isS~~~~~~~~~~~~Y~asK  158 (520)
T PRK06484        131 GHGAAIVNVASGAGLVALPKRTAYSASK  158 (520)
T ss_pred             CCCCeEEEECCcccCCCCCCCchHHHHH
Confidence            5335999999999999999999999987

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.55  E-value=9.4e-14  Score=126.55  Aligned_cols=94  Identities=19%  Similarity=0.250  Sum_probs=75.8

Q ss_pred             cCCcEEEEcCCCCchhHH--HHHHHHHcCCeEEEEecCCCcH------------HHHHHHHHHhCCCCCcEEEEeecCCC
Q psy9256          44 FNNKVVWITGASSGIGEA--LALQLSKCGAKLVLSARSSSNL------------ERVKNLCVQAGAHPQSIYTLTLDVTQ  109 (265)
Q Consensus        44 l~gk~vlItGas~GIG~a--ia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (265)
                      -.||++||||+++|||++  +|++| ++|++|+++++..+..            +...+.+.+.   +.++..++||+++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~---G~~a~~i~~DVss  114 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA---GLYAKSINGDAFS  114 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc---CCceEEEEcCCCC
Confidence            457999999999999999  89999 9999998888543221            1233333332   3567789999999


Q ss_pred             hHHHHHHHHHHHHHhCCccEEEeCCCCCcccc
Q psy9256         110 TKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  141 (265)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~  141 (265)
                      +++++++++.+++.+|++|+||||+|...+..
T Consensus       115 ~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~  146 (398)
T PRK13656        115 DEIKQKVIELIKQDLGQVDLVVYSLASPRRTD  146 (398)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCccCCCCC
Confidence            99999999999999999999999999876643

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.54  E-value=1.1e-13  Score=126.11  Aligned_cols=143  Identities=17%  Similarity=0.116  Sum_probs=98.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ++||+++||||+++||.+++++|+++|++|+.++|+.+........+. .   ..++.++.+|++|.+++.++       
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~---~~~~~~~~~Dl~~~~~~~~~-------   70 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-L---AKKIEDHFGDIRDAAKLRKA-------   70 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-h---cCCceEEEccCCCHHHHHHH-------
Confidence            468999999999999999999999999999999988765433322221 1   12455677777777766655       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             +++.     ++|++||+||...   
T Consensus        71 -------------------------------------------------------~~~~-----~~d~vih~A~~~~---   87 (349)
T TIGR02622        71 -------------------------------------------------------IAEF-----KPEIVFHLAAQPL---   87 (349)
T ss_pred             -------------------------------------------------------Hhhc-----CCCEEEECCcccc---
Confidence                                                                   3322     4677777777422   


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc------------CCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV------------GAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~------------~~~~~~~Y~asK  265 (265)
                       ...+.+++.+.+++|+.+++.+++++.+ +  . ..+++|++||.+..-            +......|+.||
T Consensus        88 -~~~~~~~~~~~~~~N~~g~~~ll~a~~~-~--~-~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK  156 (349)
T TIGR02622        88 -VRKSYADPLETFETNVMGTVNLLEAIRA-I--G-SVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSK  156 (349)
T ss_pred             -cccchhCHHHHHHHhHHHHHHHHHHHHh-c--C-CCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHH
Confidence             1234456778899999999999997643 1  1 146999999964321            112346788887

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.54  E-value=8.3e-14  Score=125.83  Aligned_cols=136  Identities=18%  Similarity=0.167  Sum_probs=94.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++||+++||||+++||.+++++|+++|  ++|++.+|+....+++....   .  ..++.++.+|++|++++.++     
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~---~--~~~~~~v~~Dl~d~~~l~~~-----   71 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF---P--APCLRFFIGDVRDKERLTRA-----   71 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh---C--CCcEEEEEccCCCHHHHHHH-----
Confidence            468999999999999999999999986  78998888765433322211   1  13566777888887665544     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               +       .++|++||+||....
T Consensus        72 ---------------------------------------------------------~-------~~iD~Vih~Ag~~~~   87 (324)
T TIGR03589        72 ---------------------------------------------------------L-------RGVDYVVHAAALKQV   87 (324)
T ss_pred             ---------------------------------------------------------H-------hcCCEEEECcccCCC
Confidence                                                                     2       135677777665321


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                       +..+.++   ++.+++|+.|+.++++++.+.    + .+++|++||.....|   .+.|++||
T Consensus        88 -~~~~~~~---~~~~~~Nv~g~~~ll~aa~~~----~-~~~iV~~SS~~~~~p---~~~Y~~sK  139 (324)
T TIGR03589        88 -PAAEYNP---FECIRTNINGAQNVIDAAIDN----G-VKRVVALSTDKAANP---INLYGATK  139 (324)
T ss_pred             -chhhcCH---HHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEeCCCCCCC---CCHHHHHH
Confidence             2222222   468999999999999988752    2 479999999765433   35688876

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.53  E-value=2e-14  Score=124.34  Aligned_cols=114  Identities=19%  Similarity=0.182  Sum_probs=85.6

Q ss_pred             HHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccc
Q psy9256          62 LALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  141 (265)
Q Consensus        62 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~  141 (265)
                      +|++|+++|++|++++|++++.+.              ..++++|++|.++++++                         
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~--------------~~~~~~Dl~~~~~v~~~-------------------------   41 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL--------------DGFIQADLGDPASIDAA-------------------------   41 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh--------------hHhhcccCCCHHHHHHH-------------------------
Confidence            478999999999999998765310              12356777777766666                         


Q ss_pred             cchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccccchHHHHhhhhhhhh
Q psy9256         142 WEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF  221 (265)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~  221 (265)
                                                           ++++.   +++|++|||||...        .++|++.+++|+.
T Consensus        42 -------------------------------------~~~~~---~~iD~li~nAG~~~--------~~~~~~~~~vN~~   73 (241)
T PRK12428         42 -------------------------------------VAALP---GRIDALFNIAGVPG--------TAPVELVARVNFL   73 (241)
T ss_pred             -------------------------------------HHHhc---CCCeEEEECCCCCC--------CCCHHHhhhhchH
Confidence                                                 44432   46677777776531        1357899999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCceEEEEccccccc---------------------------CCCCCCccccCC
Q psy9256         222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIV---------------------------GAPYSGSYTDHL  265 (265)
Q Consensus       222 ~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~---------------------------~~~~~~~Y~asK  265 (265)
                      +++++++.++|.|.+   +|+||++||.++..                           +.++.+.|++||
T Consensus        74 ~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  141 (241)
T PRK12428         74 GLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSK  141 (241)
T ss_pred             HHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHH
Confidence            999999999999853   48999999998863                           566778999987

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.51  E-value=1.4e-13  Score=124.82  Aligned_cols=137  Identities=20%  Similarity=0.132  Sum_probs=90.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHH--HHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE--RVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+.++|+++||||+++||..++++|.+.|++|++++|+.+...  .+..........+.++.++.+|++|.+++.++   
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---   78 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRW---   78 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHH---
Confidence            3567899999999999999999999999999999998754321  11111100001123456666777776665555   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++..     ++|++||+||..
T Consensus        79 -----------------------------------------------------------~~~~-----~~d~Vih~A~~~   94 (340)
T PLN02653         79 -----------------------------------------------------------LDDI-----KPDEVYNLAAQS   94 (340)
T ss_pred             -----------------------------------------------------------HHHc-----CCCEEEECCccc
Confidence                                                                       4332     367777777754


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccc
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSI  249 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~  249 (265)
                      ...    ...++.+..+++|+.++..+++++.+...+++..-++|++||.
T Consensus        95 ~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~  140 (340)
T PLN02653         95 HVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSS  140 (340)
T ss_pred             chh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccH
Confidence            321    1123446778999999999999998886543111278888775

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.51  E-value=2.4e-13  Score=129.69  Aligned_cols=134  Identities=17%  Similarity=0.251  Sum_probs=96.0

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhC-----C-CCCcEEEEeecCCChHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG-----A-HPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~D~~~~~~  112 (265)
                      +++....||+++||||++|||.+++++|++.|++|++++|+.++++++.+.+.+..     . ...++.++.+|++|.++
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            45556689999999999999999999999999999999999887776655443211     0 01346777888887665


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEE
Q psy9256         113 HRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDIL  192 (265)
Q Consensus       113 ~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldil  192 (265)
                      +.+.       +                                                              +++|++
T Consensus       153 I~~a-------L--------------------------------------------------------------ggiDiV  163 (576)
T PLN03209        153 IGPA-------L--------------------------------------------------------------GNASVV  163 (576)
T ss_pred             HHHH-------h--------------------------------------------------------------cCCCEE
Confidence            4432       2                                                              345555


Q ss_pred             EecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         193 INNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       193 VnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      |||+|....      ...+|...+++|+.+..++++++.+.    + .++||++||+++.
T Consensus       164 Vn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g-VgRIV~VSSiga~  212 (576)
T PLN03209        164 ICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATVA----K-VNHFILVTSLGTN  212 (576)
T ss_pred             EEccccccc------cccchhhHHHHHHHHHHHHHHHHHHh----C-CCEEEEEccchhc
Confidence            555554311      11246778899999999988887542    3 5899999998764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.39  E-value=4e-12  Score=114.34  Aligned_cols=130  Identities=16%  Similarity=0.198  Sum_probs=90.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.||+++||||++.||..++++|+++|++|+++.|+.+..+...+.....+ ...++.++.+|+++++++.++       
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~-------   74 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDG-AKERLKLFKADLLEESSFEQA-------   74 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccC-CCCceEEEecCCCCcchHHHH-------
Confidence            358899999999999999999999999999999998776554433222111 123566777788777665554       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++       .+|++||+|+..... 
T Consensus        75 -------------------------------------------------------~~-------~~d~vih~A~~~~~~-   91 (322)
T PLN02986         75 -------------------------------------------------------IE-------GCDAVFHTASPVFFT-   91 (322)
T ss_pred             -------------------------------------------------------Hh-------CCCEEEEeCCCcCCC-
Confidence                                                                   32       367777777753211 


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                         . .+.+.+.+++|+.++..+++++...    .+.+++|++||.+..
T Consensus        92 ---~-~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~~  132 (322)
T PLN02986         92 ---V-KDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAAV  132 (322)
T ss_pred             ---C-CCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhhe
Confidence               1 1233568899999999999876432    114699999998653

>PLN02240 UDP-glucose 4-epimerase

Probab=99.39  E-value=4.9e-12  Score=114.86  Aligned_cols=132  Identities=17%  Similarity=0.215  Sum_probs=87.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhC-CCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG-AHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .|++|+++||||+++||..++++|+++|++|++.+|......+..+...... ..+.++.++.+|+++++++.++     
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~-----   76 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKV-----   76 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHH-----
Confidence            3678999999999999999999999999999999876543332222222111 1123455666677666655544     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++.     .++|.+||+||....
T Consensus        77 ---------------------------------------------------------~~~-----~~~d~vih~a~~~~~   94 (352)
T PLN02240         77 ---------------------------------------------------------FAS-----TRFDAVIHFAGLKAV   94 (352)
T ss_pred             ---------------------------------------------------------HHh-----CCCCEEEEccccCCc
Confidence                                                                     332     156777777775422


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      .    .+.+++.+.+++|+.++..+++++    .+.+ .+++|++||..
T Consensus        95 ~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~Ss~~  134 (352)
T PLN02240         95 G----ESVAKPLLYYDNNLVGTINLLEVM----AKHG-CKKLVFSSSAT  134 (352)
T ss_pred             c----ccccCHHHHHHHHHHHHHHHHHHH----HHcC-CCEEEEEccHH
Confidence            1    122456788999999999888754    2222 46899999963

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.38  E-value=5.1e-12  Score=115.26  Aligned_cols=133  Identities=14%  Similarity=0.093  Sum_probs=90.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +..+++++||||++.||..++++|+++|++|++++|+.+..+.....+.    ...++.++.+|+++.+.+.++      
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~------   76 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK----EGDRLRLFRADLQEEGSFDEA------   76 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc----cCCeEEEEECCCCCHHHHHHH------
Confidence            4568899999999999999999999999999999887654443322221    124566777888877665544      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              +       ..+|++||+|+.....
T Consensus        77 --------------------------------------------------------~-------~~~d~Vih~A~~~~~~   93 (353)
T PLN02896         77 --------------------------------------------------------V-------KGCDGVFHVAASMEFD   93 (353)
T ss_pred             --------------------------------------------------------H-------cCCCEEEECCccccCC
Confidence                                                                    2       1357777777654322


Q ss_pred             c-ccccchHHH--HhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         203 A-WEDIELEVD--RELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       203 ~-~~~~~~~~~--~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      . ....+++++  ..++++|+.++..+++++.+..    ..+++|++||.+..
T Consensus        94 ~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~----~~~~~v~~SS~~vy  142 (353)
T PLN02896         94 VSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK----TVKRVVFTSSISTL  142 (353)
T ss_pred             ccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC----CccEEEEEechhhc
Confidence            1 122233333  4567888899999999876542    13689999997554

>PLN02583 cinnamoyl-CoA reductase

Probab=99.38  E-value=3.6e-12  Score=113.72  Aligned_cols=130  Identities=14%  Similarity=0.111  Sum_probs=89.1

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -++|+++||||+++||..++++|+++|++|+++.|+.+..+ ..+.+......+.++.++.+|++|.+++...       
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~-~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~-------   75 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETE-IEKEIRGLSCEEERLKVFDVDPLDYHSILDA-------   75 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhh-HHHHHHhcccCCCceEEEEecCCCHHHHHHH-------
Confidence            35789999999999999999999999999999998643221 1112222211124566777888887665433       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             +       ...|.+++.++..    
T Consensus        76 -------------------------------------------------------l-------~~~d~v~~~~~~~----   89 (297)
T PLN02583         76 -------------------------------------------------------L-------KGCSGLFCCFDPP----   89 (297)
T ss_pred             -------------------------------------------------------H-------cCCCEEEEeCccC----
Confidence                                                                   1       1345566544321    


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                       .+.+ .++++.+++|+.|++++++++.+.+   + .++||++||.++..
T Consensus        90 -~~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~riV~~SS~~a~~  133 (297)
T PLN02583         90 -SDYP-SYDEKMVDVEVRAAHNVLEACAQTD---T-IEKVVFTSSLTAVI  133 (297)
T ss_pred             -Cccc-ccHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEecchHhee
Confidence             1111 2467899999999999999988764   1 47999999987653

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.38  E-value=7.1e-12  Score=113.54  Aligned_cols=132  Identities=13%  Similarity=0.156  Sum_probs=90.0

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +..+++++++||||++.||..++++|+++|++|+++.|+.+....... ...... .+++.++.+|++|++++..+    
T Consensus         4 ~~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~-~~~~~~~~~Dl~d~~~~~~~----   77 (338)
T PLN00198          4 LTPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQE-LGDLKIFGADLTDEESFEAP----   77 (338)
T ss_pred             ccCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCC-CCceEEEEcCCCChHHHHHH----
Confidence            345678999999999999999999999999999988887655433221 111111 12466677777776654443    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                +       .++|++||+|+...
T Consensus        78 ----------------------------------------------------------~-------~~~d~vih~A~~~~   92 (338)
T PLN00198         78 ----------------------------------------------------------I-------AGCDLVFHVATPVN   92 (338)
T ss_pred             ----------------------------------------------------------H-------hcCCEEEEeCCCCc
Confidence                                                                      2       24678888877421


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                         ..  ..+.+.+.+++|+.++..+++++.+..    +.+++|++||.+..
T Consensus        93 ---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~----~~~~~v~~SS~~~~  135 (338)
T PLN00198         93 ---FA--SEDPENDMIKPAIQGVHNVLKACAKAK----SVKRVILTSSAAAV  135 (338)
T ss_pred             ---cC--CCChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEeecceee
Confidence               11  112345678999999999999876531    14799999997644

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.37  E-value=1.2e-11  Score=116.32  Aligned_cols=152  Identities=17%  Similarity=0.122  Sum_probs=89.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+++|+++||||+|.||..++++|+++|++|++++|......+........         .+.+ ...+.+..+     
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~---------~~~~-~~~~~l~~~-----  107 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSL---------TPIA-SIHERVRRW-----  107 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccccc---------cccc-chHHHHHHH-----
Confidence            4578899999999999999999999999999999875321100000000000         0000 000000000     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                      . ......+..+.+|++|+++++++++..     ++|++||.|+... 
T Consensus       108 --------------------------------~-~~~~~~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~-  148 (442)
T PLN02572        108 --------------------------------K-EVSGKEIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS-  148 (442)
T ss_pred             --------------------------------H-HhhCCcceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc-
Confidence                                            0 000112344455555555555546542     5788999886532 


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      .+....++++++..+++|+.|+.++++++...    +.+.++|++||.+.
T Consensus       149 ~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~----gv~~~~V~~SS~~v  194 (442)
T PLN02572        149 APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF----APDCHLVKLGTMGE  194 (442)
T ss_pred             ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh----CCCccEEEEeccee
Confidence            23444556677888999999999999876543    21248999998753

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.34  E-value=1.1e-11  Score=112.78  Aligned_cols=130  Identities=16%  Similarity=0.182  Sum_probs=83.8

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEE-EecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVL-SARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |.++||||++.||..++++|.++|+++++ .+|..+ ...... +.... ...++.++.+|++|.++++++         
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~-~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~---------   69 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTY-AGNLMS-LAPVA-QSERFAFEKVDICDRAELARV---------   69 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcc-ccchhh-hhhcc-cCCceEEEECCCcChHHHHHH---------
Confidence            57999999999999999999999988554 444322 111111 11110 112455566777776665554         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++.     .++|++||+||....    
T Consensus        70 -----------------------------------------------------~~~-----~~~D~Vih~A~~~~~----   87 (355)
T PRK10217         70 -----------------------------------------------------FTE-----HQPDCVMHLAAESHV----   87 (355)
T ss_pred             -----------------------------------------------------Hhh-----cCCCEEEECCcccCc----
Confidence                                                                 332     247778887775321    


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhh---hh-cCCceEEEEcccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFL---AR-EQGGHLVVTSSIA  250 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~---~~-~~~g~IV~isS~a  250 (265)
                      +.+.+++++.+++|+.++..+++++.+.|.   +. ....++|++||.+
T Consensus        88 ~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~  136 (355)
T PRK10217         88 DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE  136 (355)
T ss_pred             chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh
Confidence            223456788999999999999999987542   11 1125899999953

>PLN02214 cinnamoyl-CoA reductase

Probab=99.34  E-value=1.4e-11  Score=112.20  Aligned_cols=126  Identities=17%  Similarity=0.134  Sum_probs=89.2

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .+++|+++||||++.||..++++|+++|++|+.++|+.+......  +........++.++.+|+++++++..+      
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~------   78 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTH--LRELEGGKERLILCKADLQDYEALKAA------   78 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHH--HHHhhCCCCcEEEEecCcCChHHHHHH------
Confidence            356889999999999999999999999999999999765432211  111111123466677788777665544      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++       .+|++||+|+..   
T Consensus        79 --------------------------------------------------------~~-------~~d~Vih~A~~~---   92 (342)
T PLN02214         79 --------------------------------------------------------ID-------GCDGVFHTASPV---   92 (342)
T ss_pred             --------------------------------------------------------Hh-------cCCEEEEecCCC---
Confidence                                                                    22       367888888743   


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                            .+++++.+++|+.++..+++++...    + .+++|++||.++..
T Consensus        93 ------~~~~~~~~~~nv~gt~~ll~aa~~~----~-v~r~V~~SS~~avy  132 (342)
T PLN02214         93 ------TDDPEQMVEPAVNGAKFVINAAAEA----K-VKRVVITSSIGAVY  132 (342)
T ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeccceeee
Confidence                  1245778999999999999987542    2 46999999976543

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.33  E-value=1.5e-11  Score=111.72  Aligned_cols=131  Identities=20%  Similarity=0.182  Sum_probs=83.9

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcH--HHHHHHHHHhC-CCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL--ERVKNLCVQAG-AHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |+++||||++.||..++++|+++|++|++++|+.+..  +.......... ..+.++.++.+|++|.+++.++       
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~-------   73 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRI-------   73 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHH-------
Confidence            5899999999999999999999999999999876431  11111110000 0023456666777766665544       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++..     ++|++||+|+......
T Consensus        74 -------------------------------------------------------~~~~-----~~d~ViH~Aa~~~~~~   93 (343)
T TIGR01472        74 -------------------------------------------------------IDEI-----KPTEIYNLAAQSHVKV   93 (343)
T ss_pred             -------------------------------------------------------HHhC-----CCCEEEECCcccccch
Confidence                                                                   4332     4677888877543221


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      .    .+.-...+++|+.|+..+++++.+.=.++  ..++|++||.+
T Consensus        94 ~----~~~~~~~~~~n~~gt~~ll~a~~~~~~~~--~~~~v~~SS~~  134 (343)
T TIGR01472        94 S----FEIPEYTADVDGIGTLRLLEAVRTLGLIK--SVKFYQASTSE  134 (343)
T ss_pred             h----hhChHHHHHHHHHHHHHHHHHHHHhCCCc--CeeEEEeccHH
Confidence            1    11224567889999999999887641111  24788999853

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02650 dihydroflavonol-4-reductase

Probab=99.29  E-value=3.3e-11  Score=109.78  Aligned_cols=128  Identities=21%  Similarity=0.223  Sum_probs=89.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ..|+++||||++.||..++++|+++|++|++++|+.+..+.........+ ...++.++..|+++.+.+..+        
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~v~~Dl~d~~~~~~~--------   74 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPG-ATTRLTLWKADLAVEGSFDDA--------   74 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccC-CCCceEEEEecCCChhhHHHH--------
Confidence            45789999999999999999999999999999998766554433221111 113466777787777665544        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++       .+|.+||+|+....   
T Consensus        75 ------------------------------------------------------~~-------~~d~ViH~A~~~~~---   90 (351)
T PLN02650         75 ------------------------------------------------------IR-------GCTGVFHVATPMDF---   90 (351)
T ss_pred             ------------------------------------------------------Hh-------CCCEEEEeCCCCCC---
Confidence                                                                  22       36788888874321   


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      ..  .+.+++.+++|+.++..+++++.+..    ..+++|++||.+.
T Consensus        91 ~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~----~~~r~v~~SS~~~  131 (351)
T PLN02650         91 ES--KDPENEVIKPTVNGMLSIMKACAKAK----TVRRIVFTSSAGT  131 (351)
T ss_pred             CC--CCchhhhhhHHHHHHHHHHHHHHhcC----CceEEEEecchhh
Confidence            11  12236788999999999999887642    1368999999743

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.25  E-value=1e-10  Score=105.65  Aligned_cols=125  Identities=21%  Similarity=0.222  Sum_probs=82.1

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      .++||||+++||..++++|+++|++|++++|..+........+....  +.+..++.+|++|++++..+           
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~-----------   68 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALLTEI-----------   68 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhc--CCCceEEEccCCCHHHHHHH-----------
Confidence            58999999999999999999999999998775443332222222221  12455567777777665554           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         ++.     .++|++||+||......    
T Consensus        69 ---------------------------------------------------~~~-----~~~d~vvh~a~~~~~~~----   88 (338)
T PRK10675         69 ---------------------------------------------------LHD-----HAIDTVIHFAGLKAVGE----   88 (338)
T ss_pred             ---------------------------------------------------Hhc-----CCCCEEEECCccccccc----
Confidence                                                               321     25777777777543221    


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      ..+...+.+++|+.++..+++++    .+.+ .+++|++||.+
T Consensus        89 ~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~Ss~~  126 (338)
T PRK10675         89 SVQKPLEYYDNNVNGTLRLISAM----RAAN-VKNLIFSSSAT  126 (338)
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHH----HHcC-CCEEEEeccHH
Confidence            11234567889999999887754    3333 46899999964

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.25  E-value=5.1e-11  Score=106.83  Aligned_cols=128  Identities=21%  Similarity=0.236  Sum_probs=87.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +||.++||||++.||..++++|+++|++|+++.|+.+........ ........++.++..|+++++.+..+        
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~--------   73 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHL-LALDGAKERLHLFKANLLEEGSFDSV--------   73 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHH-HhccCCCCceEEEeccccCcchHHHH--------
Confidence            468999999999999999999999999999999887654332221 11111123566677777776654444        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++       .+|++||+|+....   
T Consensus        74 ------------------------------------------------------~~-------~~d~Vih~A~~~~~---   89 (322)
T PLN02662         74 ------------------------------------------------------VD-------GCEGVFHTASPFYH---   89 (322)
T ss_pred             ------------------------------------------------------Hc-------CCCEEEEeCCcccC---
Confidence                                                                  22       35778887775321   


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                       .. .+..++.+++|+.++..+++++....   + .+++|++||.++
T Consensus        90 -~~-~~~~~~~~~~nv~gt~~ll~a~~~~~---~-~~~~v~~SS~~~  130 (322)
T PLN02662         90 -DV-TDPQAELIDPAVKGTLNVLRSCAKVP---S-VKRVVVTSSMAA  130 (322)
T ss_pred             -CC-CChHHHHHHHHHHHHHHHHHHHHhCC---C-CCEEEEccCHHH
Confidence             01 11225788999999999999876431   2 469999999764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.21  E-value=1.7e-10  Score=102.60  Aligned_cols=125  Identities=14%  Similarity=0.121  Sum_probs=81.5

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          48 VVWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +++||||+++||.+++++|++.|  .+|++.+|.......  +...... ...++.++.+|++|++++.++         
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~---------   68 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNL--ENLADLE-DNPRYRFVKGDIGDRELVSRL---------   68 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhh--hhhhhhc-cCCCcEEEEcCCcCHHHHHHH---------
Confidence            38999999999999999999987  688887764321111  1111111 113455667777777666555         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++..     ++|++||+|+....    
T Consensus        69 -----------------------------------------------------~~~~-----~~d~vi~~a~~~~~----   86 (317)
T TIGR01181        69 -----------------------------------------------------FTEH-----QPDAVVHFAAESHV----   86 (317)
T ss_pred             -----------------------------------------------------Hhhc-----CCCEEEEcccccCc----
Confidence                                                                 3321     46777777775432    


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      +.+.+++++.+++|+.++..+++.+...+.    +.++|++||.+
T Consensus        87 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~  127 (317)
T TIGR01181        87 DRSISGPAAFIETNVVGTYTLLEAVRKYWH----EFRFHHISTDE  127 (317)
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC----CceEEEeeccc
Confidence            122345677899999999999887765432    34799999854

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.18  E-value=3.1e-10  Score=103.19  Aligned_cols=127  Identities=17%  Similarity=0.178  Sum_probs=81.9

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCC--cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAK-LVLSARSSS--NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .++||||++.||..++++|+++|.. |+.+++...  ..+..    .... ...++.++.+|++|.+++.++        
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~d~~~~~~~--------   68 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL----ADVS-DSERYVFEHADICDRAELDRI--------   68 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH----Hhcc-cCCceEEEEecCCCHHHHHHH--------
Confidence            4899999999999999999999976 444444321  11111    1111 123456677777777666555        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            +++     .++|++||+||.....  
T Consensus        69 ------------------------------------------------------~~~-----~~~d~vih~A~~~~~~--   87 (352)
T PRK10084         69 ------------------------------------------------------FAQ-----HQPDAVMHLAAESHVD--   87 (352)
T ss_pred             ------------------------------------------------------HHh-----cCCCEEEECCcccCCc--
Confidence                                                                  332     2577777777753221  


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh----cCCceEEEEcccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAR----EQGGHLVVTSSIA  250 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~----~~~g~IV~isS~a  250 (265)
                        .+.++.++.+++|+.|+..+++++.+.|.+.    +..+++|++||.+
T Consensus        88 --~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~  135 (352)
T PRK10084         88 --RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE  135 (352)
T ss_pred             --chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh
Confidence              1112346789999999999999998876421    1125899999953

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.18  E-value=2.5e-10  Score=101.94  Aligned_cols=123  Identities=19%  Similarity=0.199  Sum_probs=79.8

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCcc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  128 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld  128 (265)
                      ++||||+++||..++++|.++|++|++.+|......+.......    ..++..+.+|+++++++.++            
T Consensus         2 vlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~------------   65 (328)
T TIGR01179         2 ILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER----ITRVTFVEGDLRDRELLDRL------------   65 (328)
T ss_pred             EEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc----ccceEEEECCCCCHHHHHHH------------
Confidence            78999999999999999999999998887643322211111110    01455666777777665555            


Q ss_pred             EEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccccc
Q psy9256         129 ILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE  208 (265)
Q Consensus       129 ilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~  208 (265)
                                                                        ++.     +++|++||+||.....+    +
T Consensus        66 --------------------------------------------------~~~-----~~~d~vv~~ag~~~~~~----~   86 (328)
T TIGR01179        66 --------------------------------------------------FEE-----HKIDAVIHFAGLIAVGE----S   86 (328)
T ss_pred             --------------------------------------------------HHh-----CCCcEEEECccccCcch----h
Confidence                                                              331     35677777777542221    2


Q ss_pred             hHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         209 LEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       209 ~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      .++..+.+++|+.++..+++.+..    .+ .+++|++||...
T Consensus        87 ~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~ss~~~  124 (328)
T TIGR01179        87 VQDPLKYYRNNVVNTLNLLEAMQQ----TG-VKKFIFSSSAAV  124 (328)
T ss_pred             hcCchhhhhhhHHHHHHHHHHHHh----cC-CCEEEEecchhh
Confidence            233456788999999998886432    22 468999988643

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.17  E-value=1.9e-10  Score=103.05  Aligned_cols=117  Identities=21%  Similarity=0.199  Sum_probs=83.5

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      +++||||++.||..++++|++.|++|++++|+++......         ...+..+.+|+++++++.++           
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~D~~~~~~l~~~-----------   61 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE---------GLDVEIVEGDLRDPASLRKA-----------   61 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc---------cCCceEEEeeCCCHHHHHHH-----------
Confidence            6899999999999999999999999999999865432211         12455677777777665544           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         +       ..+|+++|+|+....      
T Consensus        62 ---------------------------------------------------~-------~~~d~vi~~a~~~~~------   77 (328)
T TIGR03466        62 ---------------------------------------------------V-------AGCRALFHVAADYRL------   77 (328)
T ss_pred             ---------------------------------------------------H-------hCCCEEEEeceeccc------
Confidence                                                               2       245778887764211      


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      ..+++++.+++|+.++..+++++..    .+ .+++|++||.+...
T Consensus        78 ~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~  118 (328)
T TIGR03466        78 WAPDPEEMYAANVEGTRNLLRAALE----AG-VERVVYTSSVATLG  118 (328)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHH----hC-CCeEEEEechhhcC
Confidence            1234567889999999998887653    22 47999999976543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.16  E-value=3.7e-10  Score=106.45  Aligned_cols=144  Identities=18%  Similarity=0.168  Sum_probs=107.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..+.||+++||||+|.||.++++++++.+.+ +++.+|++-++.....++..... ..+..++-+|+.|.+.+..+    
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~----  320 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERA----  320 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-CcceEEEecccccHHHHHHH----
Confidence            3578999999999999999999999998865 77889998888887777776432 34666777777777665555    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++.     -++|+++|.|+.-+
T Consensus       321 ----------------------------------------------------------~~~-----~kvd~VfHAAA~KH  337 (588)
T COG1086         321 ----------------------------------------------------------MEG-----HKVDIVFHAAALKH  337 (588)
T ss_pred             ----------------------------------------------------------Hhc-----CCCceEEEhhhhcc
Confidence                                                                      322     25888888888654


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      -.-.+.    ...+.+.+|++|+..++.++...    + -.++|.+|+=-+..|.   .+|++||
T Consensus       338 VPl~E~----nP~Eai~tNV~GT~nv~~aa~~~----~-V~~~V~iSTDKAV~Pt---NvmGaTK  390 (588)
T COG1086         338 VPLVEY----NPEEAIKTNVLGTENVAEAAIKN----G-VKKFVLISTDKAVNPT---NVMGATK  390 (588)
T ss_pred             Ccchhc----CHHHHHHHhhHhHHHHHHHHHHh----C-CCEEEEEecCcccCCc---hHhhHHH
Confidence            433332    34678999999999999988663    2 4689999997766553   4466665

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.14  E-value=4.8e-10  Score=97.47  Aligned_cols=61  Identities=21%  Similarity=0.281  Sum_probs=47.3

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT  110 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~  110 (265)
                      +..+++++||||+++||..++++|++.|++|++..|+++..++...       ...++.++.+|+++.
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-------~~~~~~~~~~Dl~d~   74 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP-------QDPSLQIVRADVTEG   74 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc-------cCCceEEEEeeCCCC
Confidence            4567899999999999999999999999999999988654432211       123577788888873

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.14  E-value=1.3e-10  Score=100.06  Aligned_cols=83  Identities=14%  Similarity=0.159  Sum_probs=53.7

Q ss_pred             EEEcCC-CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          49 VWITGA-SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        49 vlItGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      =.||.. ++|||+++|++|+++|++|+++++... +       ...    .   ...+|+++.+++..+++.+.+.+|++
T Consensus        17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l-------~~~----~---~~~~Dv~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L-------KPE----P---HPNLSIREIETTKDLLITLKELVQEH   81 (227)
T ss_pred             eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c-------ccc----c---CCcceeecHHHHHHHHHHHHHHcCCC
Confidence            345544 668999999999999999999876211 0       000    0   13478888888887766666666666


Q ss_pred             cEEEeCCCCCcccccchhh
Q psy9256         128 DILINNAGRSQRAAWEDIE  146 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~  146 (265)
                      |++|||||+.........+
T Consensus        82 DiLVnnAgv~d~~~~~~~s  100 (227)
T TIGR02114        82 DILIHSMAVSDYTPVYMTD  100 (227)
T ss_pred             CEEEECCEeccccchhhCC
Confidence            6666666654433333333

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.09  E-value=1.1e-10  Score=103.04  Aligned_cols=138  Identities=22%  Similarity=0.217  Sum_probs=87.7

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCC-CC--cEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          49 VWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAH-PQ--SIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~--~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ++||||+|.||.++++++++.+. .+++.+|++..+-.+.+++.....+ .-  ...++.+|++|.+.+..+        
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~--------   72 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRI--------   72 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHH--------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHH--------
Confidence            68999999999999999999985 6999999988887777776543321 11  112334555555544444        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            +++     .++|+++|.|+.-+..-.
T Consensus        73 ------------------------------------------------------~~~-----~~pdiVfHaAA~KhVpl~   93 (293)
T PF02719_consen   73 ------------------------------------------------------FEE-----YKPDIVFHAAALKHVPLM   93 (293)
T ss_dssp             ------------------------------------------------------TT-------T-SEEEE------HHHH
T ss_pred             ------------------------------------------------------Hhh-----cCCCEEEEChhcCCCChH
Confidence                                                                  322     268888888887654433


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++    ...+.+++|++|+..+++++..+    + -.++|++||=-+.-|   ...|++||
T Consensus        94 E~----~p~eav~tNv~GT~nv~~aa~~~----~-v~~~v~ISTDKAv~P---tnvmGatK  142 (293)
T PF02719_consen   94 ED----NPFEAVKTNVLGTQNVAEAAIEH----G-VERFVFISTDKAVNP---TNVMGATK  142 (293)
T ss_dssp             CC----CHHHHHHHHCHHHHHHHHHHHHT----T--SEEEEEEECGCSS-----SHHHHHH
T ss_pred             Hh----CHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEccccccCCC---CcHHHHHH
Confidence            43    33678999999999999988764    2 469999999766554   25677665

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.01  E-value=4.1e-09  Score=97.77  Aligned_cols=71  Identities=23%  Similarity=0.217  Sum_probs=51.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHH--HHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV--KNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ...++.++||||++.||..++++|.++|++|+++.|+.+..+..  .......   ..++.++.+|++|++++.++
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~---~~~v~~v~~Dl~d~~~l~~~  129 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE---LPGAEVVFGDVTDADSLRKV  129 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh---cCCceEEEeeCCCHHHHHHH
Confidence            45678999999999999999999999999999999987543211  1111111   13566778888887776665

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.00  E-value=6.2e-09  Score=94.91  Aligned_cols=129  Identities=13%  Similarity=0.071  Sum_probs=83.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHH-hCCC-CCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQ-AGAH-PQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +++|.++||||+|=||..++++|.++|.+|++++|.........+.... .... ..++.++.+|++|.+.+..+     
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~-----   87 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKA-----   87 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH-----
Confidence            4567899999999999999999999999999999865433222221111 0100 12455566666665543333     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++       .+|++||.|+....
T Consensus        88 ---------------------------------------------------------~~-------~~d~ViHlAa~~~~  103 (348)
T PRK15181         88 ---------------------------------------------------------CK-------NVDYVLHQAALGSV  103 (348)
T ss_pred             ---------------------------------------------------------hh-------CCCEEEECccccCc
Confidence                                                                     32       36888888875432


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      .. .   .++-.+.+++|+.|+..+.+.+..    .+ -.++|++||.+
T Consensus       104 ~~-~---~~~~~~~~~~Nv~gt~nll~~~~~----~~-~~~~v~~SS~~  143 (348)
T PRK15181        104 PR-S---LKDPIATNSANIDGFLNMLTAARD----AH-VSSFTYAASSS  143 (348)
T ss_pred             hh-h---hhCHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeechH
Confidence            11 1   122245688999999999886632    22 46899999864

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.98  E-value=6.3e-09  Score=94.19  Aligned_cols=131  Identities=20%  Similarity=0.226  Sum_probs=81.0

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHH---HHHHHHHHhCCC----C-CcEEEEeecCCChHHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLE---RVKNLCVQAGAH----P-QSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~---~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~  117 (265)
                      +++||||+++||..++++|+++|  ++|++..|+.+..+   ++.+.+......    . .++.++.+|++++..-.   
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl---   77 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGL---   77 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCc---
Confidence            48999999999999999999998  77999999866332   222222222110    0 34555666665542100   


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                           +.++    .+.+   ...+|++||+|+
T Consensus        78 -----------------------------------------------------~~~~----~~~~---~~~~d~vih~a~   97 (367)
T TIGR01746        78 -----------------------------------------------------SDAE----WERL---AENVDTIVHNGA   97 (367)
T ss_pred             -----------------------------------------------------CHHH----HHHH---HhhCCEEEeCCc
Confidence                                                                 0000    1111   145788888887


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      ....       ...+++.+++|+.++..+++.+..    .+ ..+++++||.+...
T Consensus        98 ~~~~-------~~~~~~~~~~nv~g~~~ll~~a~~----~~-~~~~v~iSS~~v~~  141 (367)
T TIGR01746        98 LVNW-------VYPYSELRAANVLGTREVLRLAAS----GR-AKPLHYVSTISVLA  141 (367)
T ss_pred             Eecc-------CCcHHHHhhhhhHHHHHHHHHHhh----CC-CceEEEEccccccC
Confidence            5421       123466778999999988876543    22 35699999986653

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1502|consensus

Probab=98.98  E-value=1.1e-08  Score=91.38  Aligned_cols=132  Identities=17%  Similarity=0.132  Sum_probs=101.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .++.|.||||+|=||..++++|+++|++|..+.|+++..+. .+.+.+..+.+.++..+..|++++++++..        
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~-~~~L~~l~~a~~~l~l~~aDL~d~~sf~~a--------   75 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKK-TEHLRKLEGAKERLKLFKADLLDEGSFDKA--------   75 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhh-HHHHHhcccCcccceEEeccccccchHHHH--------
Confidence            68899999999999999999999999999999999988443 334555555567799999999999886666        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            +       ...|+++|.|........
T Consensus        76 ------------------------------------------------------i-------~gcdgVfH~Asp~~~~~~   94 (327)
T KOG1502|consen   76 ------------------------------------------------------I-------DGCDGVFHTASPVDFDLE   94 (327)
T ss_pred             ------------------------------------------------------H-------hCCCEEEEeCccCCCCCC
Confidence                                                                  2       247888888875433221


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA  255 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~  255 (265)
                      +   ++  .++++..+.|+..+..+....    +.-.++|+.||.++..+.
T Consensus        95 ~---~e--~~li~pav~Gt~nVL~ac~~~----~sVkrvV~TSS~aAv~~~  136 (327)
T KOG1502|consen   95 D---PE--KELIDPAVKGTKNVLEACKKT----KSVKRVVYTSSTAAVRYN  136 (327)
T ss_pred             C---cH--HhhhhHHHHHHHHHHHHHhcc----CCcceEEEeccHHHhccC
Confidence            1   11  368889999999988877543    224799999999988754

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.94  E-value=5.7e-09  Score=86.44  Aligned_cols=85  Identities=25%  Similarity=0.338  Sum_probs=71.2

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      +++||||+ |+|.+++++|+++|++|++.+|+++..+.+...+.    ...++.++++|++|++++.++++.+.+.+|++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~----~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKREST----TPESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhh----cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            58999997 89999999999999999999998766555443332    13578889999999999999999999999999


Q ss_pred             cEEEeCCCCC
Q psy9256         128 DILINNAGRS  137 (265)
Q Consensus       128 dilinnAg~~  137 (265)
                      |++|+..=..
T Consensus        77 d~lv~~vh~~   86 (177)
T PRK08309         77 DLAVAWIHSS   86 (177)
T ss_pred             eEEEEecccc
Confidence            9999887654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.90  E-value=1.5e-08  Score=93.94  Aligned_cols=82  Identities=28%  Similarity=0.336  Sum_probs=63.1

Q ss_pred             cccCCcEEEEcCC---------------CCc-hhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEee
Q psy9256          42 NYFNNKVVWITGA---------------SSG-IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL  105 (265)
Q Consensus        42 ~~l~gk~vlItGa---------------s~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (265)
                      .++.||+++||||               |+| +|.++|++|++.|++|++++++.+ .+        .   +..  ...+
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--------~---~~~--~~~~  249 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--------T---PAG--VKRI  249 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--------C---CCC--cEEE
Confidence            4689999999999               555 999999999999999999987652 11        0   111  2467


Q ss_pred             cCCChHHHHHHHHHHHHHhCCccEEEeCCCCCccc
Q psy9256         106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  140 (265)
Q Consensus       106 D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~  140 (265)
                      |+++.++..+.   +.+.++++|++|||||++...
T Consensus       250 dv~~~~~~~~~---v~~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        250 DVESAQEMLDA---VLAALPQADIFIMAAAVADYR  281 (399)
T ss_pred             ccCCHHHHHHH---HHHhcCCCCEEEEcccccccc
Confidence            99987776555   446789999999999996443

>PLN02686 cinnamoyl-CoA reductase

Probab=98.85  E-value=3.8e-08  Score=90.53  Aligned_cols=74  Identities=18%  Similarity=0.284  Sum_probs=52.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCC---CCcEEEEeecCCChHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAH---PQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ..+++|+++||||+++||..++++|+++|++|+++.|+.+..+.+.+ +...+..   ...+.++.+|++|.+++.++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~-l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~  125 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLRE-MEMFGEMGRSNDGIWTVMANLTEPESLHEA  125 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhhhccccccCCceEEEEcCCCCHHHHHHH
Confidence            46789999999999999999999999999999988887655444322 2111110   12456677777777665554

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.85  E-value=1.7e-08  Score=89.92  Aligned_cols=115  Identities=17%  Similarity=0.202  Sum_probs=75.0

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          49 VWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      ++||||++.||..++++|.++|+ .|++++|+.... ...+    ..     ...+..|+++.+.++.+           
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~----~~-----~~~~~~d~~~~~~~~~~-----------   59 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLN----LA-----DLVIADYIDKEDFLDRL-----------   59 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhh----hh-----heeeeccCcchhHHHHH-----------
Confidence            58999999999999999999997 688877654321 1111    10     01234455554443333           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         .+.   .++++|++||+|+...      .
T Consensus        60 ---------------------------------------------------~~~---~~~~~D~vvh~A~~~~------~   79 (314)
T TIGR02197        60 ---------------------------------------------------EKG---AFGKIEAIFHQGACSD------T   79 (314)
T ss_pred             ---------------------------------------------------Hhh---ccCCCCEEEECccccC------c
Confidence                                                               221   2356888888887532      1


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      +.++.+..+++|+.++..+++++..    .  +.++|++||.+
T Consensus        80 ~~~~~~~~~~~n~~~~~~ll~~~~~----~--~~~~v~~SS~~  116 (314)
T TIGR02197        80 TETDGEYMMENNYQYSKRLLDWCAE----K--GIPFIYASSAA  116 (314)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHH----h--CCcEEEEccHH
Confidence            2235577889999999998887643    2  24799999964

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.83  E-value=4.1e-08  Score=83.59  Aligned_cols=118  Identities=25%  Similarity=0.266  Sum_probs=84.2

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCcc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  128 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld  128 (265)
                      ++||||++=||.+++++|.++|..|+...|+..........        .++.++.+|++|.+.++++            
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~--------~~~~~~~~dl~~~~~~~~~------------   60 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK--------LNVEFVIGDLTDKEQLEKL------------   60 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH--------TTEEEEESETTSHHHHHHH------------
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc--------ceEEEEEeecccccccccc------------
Confidence            68999999999999999999999988888876654332221        1677888888888777766            


Q ss_pred             EEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccccc
Q psy9256         129 ILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE  208 (265)
Q Consensus       129 ilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~  208 (265)
                                                                        ++..     .+|.++|.|+....    ..+
T Consensus        61 --------------------------------------------------~~~~-----~~d~vi~~a~~~~~----~~~   81 (236)
T PF01370_consen   61 --------------------------------------------------LEKA-----NIDVVIHLAAFSSN----PES   81 (236)
T ss_dssp             --------------------------------------------------HHHH-----TESEEEEEBSSSSH----HHH
T ss_pred             --------------------------------------------------cccc-----CceEEEEeeccccc----ccc
Confidence                                                              3332     67888888875431    112


Q ss_pred             hHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         209 LEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       209 ~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      .++..+.++.|+.+...+.+.+..    .+ ..++|++||..
T Consensus        82 ~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~i~~sS~~  118 (236)
T PF01370_consen   82 FEDPEEIIEANVQGTRNLLEAARE----AG-VKRFIFLSSAS  118 (236)
T ss_dssp             HHSHHHHHHHHHHHHHHHHHHHHH----HT-TSEEEEEEEGG
T ss_pred             cccccccccccccccccccccccc----cc-ccccccccccc
Confidence            245577788888877777765543    33 36999999953

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.79  E-value=3e-08  Score=88.04  Aligned_cols=120  Identities=19%  Similarity=0.141  Sum_probs=84.6

Q ss_pred             EEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          50 WITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        50 lItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      |||||+|=+|..++++|.++|  .+|.+.++++.....  ......    ....++.+|++|++++.+.           
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~----~~~~~~~~Di~d~~~l~~a-----------   63 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKS----GVKEYIQGDITDPESLEEA-----------   63 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcc----cceeEEEeccccHHHHHHH-----------
Confidence            699999999999999999999  678887776543211  111111    1222677777777665544           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         +       ...|+++|.|+......    
T Consensus        64 ---------------------------------------------------~-------~g~d~V~H~Aa~~~~~~----   81 (280)
T PF01073_consen   64 ---------------------------------------------------L-------EGVDVVFHTAAPVPPWG----   81 (280)
T ss_pred             ---------------------------------------------------h-------cCCceEEEeCccccccC----
Confidence                                                               3       24688999988654322    


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG  254 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~  254 (265)
                       ....++.+++|+.|+-.+++++...    + -.++|++||.+...+
T Consensus        82 -~~~~~~~~~vNV~GT~nvl~aa~~~----~-VkrlVytSS~~vv~~  122 (280)
T PF01073_consen   82 -DYPPEEYYKVNVDGTRNVLEAARKA----G-VKRLVYTSSISVVFD  122 (280)
T ss_pred             -cccHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEcCcceeEe
Confidence             3445789999999999999877642    2 579999999987664

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.78  E-value=3.6e-08  Score=88.00  Aligned_cols=33  Identities=21%  Similarity=0.312  Sum_probs=28.4

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      ++||||+|-||..++++|.++|.+++++.|+.+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~   34 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLK   34 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCC
Confidence            799999999999999999999997766655543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.76  E-value=5.4e-08  Score=85.78  Aligned_cols=101  Identities=29%  Similarity=0.329  Sum_probs=72.2

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCcc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  128 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld  128 (265)
                      ++||||++.||..++++|.+.|++|+++.|+                        .+|+.+++++.+.            
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------------~~d~~~~~~~~~~------------   45 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS------------------------QLDLTDPEALERL------------   45 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------------ccCCCCHHHHHHH------------
Confidence            7999999999999999999999999988874                        2577776665555            


Q ss_pred             EEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccccc
Q psy9256         129 ILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE  208 (265)
Q Consensus       129 ilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~  208 (265)
                                                                        ++.     .++|++||+||......    .
T Consensus        46 --------------------------------------------------~~~-----~~~d~vi~~a~~~~~~~----~   66 (287)
T TIGR01214        46 --------------------------------------------------LRA-----IRPDAVVNTAAYTDVDG----A   66 (287)
T ss_pred             --------------------------------------------------HHh-----CCCCEEEECCccccccc----c
Confidence                                                              222     14577777776542211    1


Q ss_pred             hHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         209 LEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       209 ~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      ....++.+++|+.++..+++++..    .  +.++|++||.+
T Consensus        67 ~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~Ss~~  102 (287)
T TIGR01214        67 ESDPEKAFAVNALAPQNLARAAAR----H--GARLVHISTDY  102 (287)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEeeee
Confidence            123456789999999998887532    2  24899999864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.73  E-value=2.9e-07  Score=75.77  Aligned_cols=57  Identities=25%  Similarity=0.307  Sum_probs=49.7

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ++|+||++.+|..++++|.++|++|.+..|++++.++           ..++.++.+|+.|++++.+.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----------~~~~~~~~~d~~d~~~~~~a   57 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----------SPGVEIIQGDLFDPDSVKAA   57 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----------CTTEEEEESCTTCHHHHHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----------ccccccceeeehhhhhhhhh
Confidence            6899999999999999999999999999999887665           25788999999998765554

...

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.71  E-value=1e-07  Score=84.73  Aligned_cols=119  Identities=21%  Similarity=0.228  Sum_probs=81.4

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCcc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  128 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld  128 (265)
                      ++||||++-||..++++|.++|+.|+.++|.........          ..+.++.+|+++.+.....            
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~------------   60 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----------SGVEFVVLDLTDRDLVDEL------------   60 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----------cccceeeecccchHHHHHH------------
Confidence            899999999999999999999999999999776543322          2455677777776433322            


Q ss_pred             EEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccccc
Q psy9256         129 ILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE  208 (265)
Q Consensus       129 ilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~  208 (265)
                                                                            .+...  |.++|.|+.........  
T Consensus        61 ------------------------------------------------------~~~~~--d~vih~aa~~~~~~~~~--   82 (314)
T COG0451          61 ------------------------------------------------------AKGVP--DAVIHLAAQSSVPDSNA--   82 (314)
T ss_pred             ------------------------------------------------------HhcCC--CEEEEccccCchhhhhh--
Confidence                                                                  11111  88888888653321111  


Q ss_pred             hHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         209 LEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       209 ~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      . +..+.+++|+.++..+.+++..    .+ ..++|+.||.+...
T Consensus        83 ~-~~~~~~~~nv~gt~~ll~aa~~----~~-~~~~v~~ss~~~~~  121 (314)
T COG0451          83 S-DPAEFLDVNVDGTLNLLEAARA----AG-VKRFVFASSVSVVY  121 (314)
T ss_pred             h-CHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCCCceEC
Confidence            1 3456889999999999887765    22 47888866644333

>PLN02427 UDP-apiose/xylose synthase

Probab=98.69  E-value=2.3e-07  Score=85.62  Aligned_cols=71  Identities=11%  Similarity=0.081  Sum_probs=46.9

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      .+.++++||||+|-||..++++|.++ |+.|++++|+.+..+.+....  ......++.++.+|++|.+.+.++
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~--~~~~~~~~~~~~~Dl~d~~~l~~~   83 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPD--TVPWSGRIQFHRINIKHDSRLEGL   83 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccc--cccCCCCeEEEEcCCCChHHHHHH
Confidence            34467999999999999999999998 589999988755433221100  000123466677777776554443

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.69  E-value=3.5e-07  Score=84.62  Aligned_cols=82  Identities=28%  Similarity=0.308  Sum_probs=62.6

Q ss_pred             cccCCcEEEEcCC---------------CCc-hhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEee
Q psy9256          42 NYFNNKVVWITGA---------------SSG-IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL  105 (265)
Q Consensus        42 ~~l~gk~vlItGa---------------s~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (265)
                      .+++||.++||||               |+| +|.++|+++...|++|++++++.+..            .+..  ...+
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------------~~~~--~~~~  246 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------------TPPG--VKSI  246 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------------CCCC--cEEE
Confidence            3588999999999               667 99999999999999999987654321            0111  2568


Q ss_pred             cCCChHHH-HHHHHHHHHHhCCccEEEeCCCCCccc
Q psy9256         106 DVTQTKYH-RRCFDAVIQQFGCLDILINNAGRSQRA  140 (265)
Q Consensus       106 D~~~~~~~-~~~~~~~~~~~g~ldilinnAg~~~~~  140 (265)
                      |+++.++. +++.+.   ..++.|++|||||++...
T Consensus       247 ~v~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd~~  279 (390)
T TIGR00521       247 KVSTAEEMLEAALNE---LAKDFDIFISAAAVADFK  279 (390)
T ss_pred             EeccHHHHHHHHHHh---hcccCCEEEEcccccccc
Confidence            99998887 555433   358899999999997543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.69  E-value=8.7e-08  Score=85.45  Aligned_cols=86  Identities=20%  Similarity=0.181  Sum_probs=62.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCC---CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSS---SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      ..+++|+++|+|+ +|+|++++..|++.|++ |++++|+.   ++.+++.+++.+.   ........+|+++.+++... 
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~---~~~~~~~~~d~~~~~~~~~~-  196 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE---VPECIVNVYDLNDTEKLKAE-  196 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc---CCCceeEEechhhhhHHHhh-
Confidence            4578999999999 59999999999999997 99999987   4555554444322   23455567888776655443 


Q ss_pred             HHHHHHhCCccEEEeCCCCCc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQ  138 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~  138 (265)
                            ....|++|||-.+.-
T Consensus       197 ------~~~~DilINaTp~Gm  211 (289)
T PRK12548        197 ------IASSDILVNATLVGM  211 (289)
T ss_pred             ------hccCCEEEEeCCCCC
Confidence                  234599999987643

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.68  E-value=2.3e-07  Score=91.77  Aligned_cols=129  Identities=16%  Similarity=0.154  Sum_probs=80.9

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKC--GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++|+++||||++-||..++++|.++  |.+|+..+|.... +..... .... ...++.++.+|++|.+.+..+     
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~~~l-~~~~-~~~~v~~~~~Dl~d~~~~~~~-----   75 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNLKNL-NPSK-SSPNFKFVKGDIASADLVNYL-----   75 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chhhhh-hhcc-cCCCeEEEECCCCChHHHHHH-----
Confidence            35688999999999999999999987  6788888874311 111111 1100 123566677777776654433     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               +.     ..++|++||+|+....
T Consensus        76 ---------------------------------------------------------~~-----~~~~D~ViHlAa~~~~   93 (668)
T PLN02260         76 ---------------------------------------------------------LI-----TEGIDTIMHFAAQTHV   93 (668)
T ss_pred             ---------------------------------------------------------Hh-----hcCCCEEEECCCccCc
Confidence                                                                     11     1357777777775422


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      .    ....+..+.+++|+.++..+++++..    .+..+++|++||..
T Consensus        94 ~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~vkr~I~~SS~~  134 (668)
T PLN02260         94 D----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDE  134 (668)
T ss_pred             h----hhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEcchH
Confidence            1    11122346778999999988876532    22136899999964

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=98.67  E-value=2.8e-07  Score=81.88  Aligned_cols=161  Identities=16%  Similarity=0.168  Sum_probs=113.7

Q ss_pred             CcEEEEcCC-CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGA-SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .++|+|.|. ...|++.+|..|.++|+-|+++..+.++.+....+-      ...+.....|..++.++...+++..+.+
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~------~~dI~~L~ld~~~~~~~~~~l~~f~~~L   76 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED------RPDIRPLWLDDSDPSSIHASLSRFASLL   76 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc------CCCCCCcccCCCCCcchHHHHHHHHHHh
Confidence            467888886 689999999999999999999988765544433321      1346677788877877777766666655


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-cccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-QRAA  203 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-~~~~  203 (265)
                      .++..=+.+|.                                                .+.-++..+|..-... ..+|
T Consensus        77 ~~p~~p~~~~~------------------------------------------------~h~l~L~svi~~Psl~yp~gP  108 (299)
T PF08643_consen   77 SRPHVPFPGAP------------------------------------------------PHHLQLKSVIFIPSLSYPTGP  108 (299)
T ss_pred             cCCCCCCCCCC------------------------------------------------CceeEEEEEEEecCCCCCCCC
Confidence            54322222221                                                1123555666544443 5689


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc-CCceEEEEc-ccccccCCCCCCc
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLARE-QGGHLVVTS-SIAGIVGAPYSGS  260 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~-~~g~IV~is-S~ag~~~~~~~~~  260 (265)
                      +++++++.|...+++|++.++.+++.++|+|..+. .+.+||.++ |+.+....|+.+.
T Consensus       109 ie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~Pfhsp  167 (299)
T PF08643_consen  109 IETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNPPFHSP  167 (299)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCCCccCH
Confidence            99999999999999999999999999999998732 245555555 7777777776654

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.67  E-value=1.6e-07  Score=86.42  Aligned_cols=36  Identities=25%  Similarity=0.268  Sum_probs=33.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      .+|.++||||++-||..+++.|.++|+.|+.++|..
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~   55 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK   55 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence            568899999999999999999999999999999864

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.63  E-value=5.1e-07  Score=79.53  Aligned_cols=125  Identities=18%  Similarity=0.207  Sum_probs=85.1

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      +.+|||||++=||.-.+..|++.|..|++.+.-...-.+....        ....+++.|+.|.+.++++          
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~--------~~~~f~~gDi~D~~~L~~v----------   62 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK--------LQFKFYEGDLLDRALLTAV----------   62 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh--------ccCceEEeccccHHHHHHH----------
Confidence            3689999999999999999999999999998643322222221        0146778888887766655          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          +++     .++|.++|-||...-+.   
T Consensus        63 ----------------------------------------------------f~~-----~~idaViHFAa~~~VgE---   82 (329)
T COG1087          63 ----------------------------------------------------FEE-----NKIDAVVHFAASISVGE---   82 (329)
T ss_pred             ----------------------------------------------------HHh-----cCCCEEEECccccccch---
Confidence                                                                333     26888999888654442   


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP  256 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~  256 (265)
                       +.++=.+-++-|+.|+..+++++..    .+ -.++||- |.++..|.|
T Consensus        83 -Sv~~Pl~Yy~NNv~gTl~Ll~am~~----~g-v~~~vFS-StAavYG~p  125 (329)
T COG1087          83 -SVQNPLKYYDNNVVGTLNLIEAMLQ----TG-VKKFIFS-STAAVYGEP  125 (329)
T ss_pred             -hhhCHHHHHhhchHhHHHHHHHHHH----hC-CCEEEEe-cchhhcCCC
Confidence             2333467788999999988776544    33 4567654 445555443

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.62  E-value=3.4e-07  Score=82.33  Aligned_cols=60  Identities=13%  Similarity=0.096  Sum_probs=46.7

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      +++||||+|-||..++++|.++|++|.+.+|+.+..+...         ...+.++.+|++|++++.+.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~---------~~~v~~v~~Dl~d~~~l~~a   61 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK---------EWGAELVYGDLSLPETLPPS   61 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh---------hcCCEEEECCCCCHHHHHHH
Confidence            5899999999999999999999999999999864332111         12467788899888776544

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.61  E-value=2.9e-07  Score=90.96  Aligned_cols=119  Identities=15%  Similarity=0.145  Sum_probs=79.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH-HHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY-HRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~  122 (265)
                      .+++++||||+|-||..++++|.++ |++|+.++|........      ..  ..++.++.+|++|.+. ++++      
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~------~~--~~~~~~~~gDl~d~~~~l~~~------  379 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF------LG--HPRFHFVEGDISIHSEWIEYH------  379 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh------cC--CCceEEEeccccCcHHHHHHH------
Confidence            4668999999999999999999985 79999999865432211      01  1246666777776543 2221      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              +       ..+|++||.|+.....
T Consensus       380 --------------------------------------------------------l-------~~~D~ViHlAa~~~~~  396 (660)
T PRK08125        380 --------------------------------------------------------I-------KKCDVVLPLVAIATPI  396 (660)
T ss_pred             --------------------------------------------------------h-------cCCCEEEECccccCch
Confidence                                                                    1       2467888877754332


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      ...    ++.++.+++|+.+...+..++..    .  +.++|++||.+
T Consensus       397 ~~~----~~~~~~~~~Nv~~t~~ll~a~~~----~--~~~~V~~SS~~  434 (660)
T PRK08125        397 EYT----RNPLRVFELDFEENLKIIRYCVK----Y--NKRIIFPSTSE  434 (660)
T ss_pred             hhc----cCHHHHHHhhHHHHHHHHHHHHh----c--CCeEEEEcchh
Confidence            111    12245678999999988887653    2  25899999963

>PRK05865 hypothetical protein; Provisional

Probab=98.58  E-value=4.6e-07  Score=91.02  Aligned_cols=57  Identities=25%  Similarity=0.282  Sum_probs=45.1

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      .++||||++.||..++++|.++|++|+.++|+.+..         .   ..++.++.+|++|.+++.++
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---------~---~~~v~~v~gDL~D~~~l~~a   58 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---------W---PSSADFIAADIRDATAVESA   58 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---------c---ccCceEEEeeCCCHHHHHHH
Confidence            589999999999999999999999999999874321         0   12466778888888776655

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.58  E-value=3.2e-07  Score=81.91  Aligned_cols=105  Identities=18%  Similarity=0.139  Sum_probs=71.2

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      .++||||+|=||..++++|.+.| +|+.++|...                    .+..|++|.+.+.++           
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------------~~~~Dl~d~~~~~~~-----------   49 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------------DYCGDFSNPEGVAET-----------   49 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------------cccCCCCCHHHHHHH-----------
Confidence            59999999999999999999999 7887776421                    123577777665554           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         ++.     -++|++||.|+......    
T Consensus        50 ---------------------------------------------------~~~-----~~~D~Vih~Aa~~~~~~----   69 (299)
T PRK09987         50 ---------------------------------------------------VRK-----IRPDVIVNAAAHTAVDK----   69 (299)
T ss_pred             ---------------------------------------------------HHh-----cCCCEEEECCccCCcch----
Confidence                                                               322     14677777777543221    


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      ..++-+..+++|+.++..+++++..    .  +.++|++||..
T Consensus        70 ~~~~~~~~~~~N~~~~~~l~~aa~~----~--g~~~v~~Ss~~  106 (299)
T PRK09987         70 AESEPEFAQLLNATSVEAIAKAANE----V--GAWVVHYSTDY  106 (299)
T ss_pred             hhcCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEccce
Confidence            1112245678899999988886543    2  24788888853

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.57  E-value=6.4e-07  Score=81.46  Aligned_cols=117  Identities=20%  Similarity=0.222  Sum_probs=76.9

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCC-ChHHHHHHHHHHHHHh
Q psy9256          47 KVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT-QTKYHRRCFDAVIQQF  124 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~  124 (265)
                      +.++||||+|=||..++++|.+. |.+|+.++|+.+......      .  ...+.++..|++ +.+.+..+        
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~------~--~~~~~~~~~Dl~~~~~~~~~~--------   65 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV------N--HPRMHFFEGDITINKEWIEYH--------   65 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc------c--CCCeEEEeCCCCCCHHHHHHH--------
Confidence            46999999999999999999986 699999988653222111      1  134666777876 44433222        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            +       ..+|++||.|+...+...
T Consensus        66 ------------------------------------------------------~-------~~~d~ViH~aa~~~~~~~   84 (347)
T PRK11908         66 ------------------------------------------------------V-------KKCDVILPLVAIATPATY   84 (347)
T ss_pred             ------------------------------------------------------H-------cCCCEEEECcccCChHHh
Confidence                                                                  1       246788887775432211


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      .    ++-+..+++|+.+...++.++..    .  +.++|++||..
T Consensus        85 ~----~~p~~~~~~n~~~~~~ll~aa~~----~--~~~~v~~SS~~  120 (347)
T PRK11908         85 V----KQPLRVFELDFEANLPIVRSAVK----Y--GKHLVFPSTSE  120 (347)
T ss_pred             h----cCcHHHHHHHHHHHHHHHHHHHh----c--CCeEEEEecce
Confidence            1    12246678999999888776542    2  25899999964

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.55  E-value=4.7e-07  Score=85.36  Aligned_cols=36  Identities=19%  Similarity=0.225  Sum_probs=32.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      +++.++||||+|-||..++++|.++|++|+.++|..
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~  153 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFF  153 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCC
Confidence            568899999999999999999999999999988754

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.53  E-value=1e-06  Score=86.74  Aligned_cols=125  Identities=20%  Similarity=0.179  Sum_probs=79.8

Q ss_pred             EEEEcCCCCchhHHHHHHHH--HcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          48 VVWITGASSGIGEALALQLS--KCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +++||||+|-||..++++|.  ..|.+|++++|+... +.........+  ..++.++..|++|++.....         
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~---------   69 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWG--ADRVVPLVGDLTEPGLGLSE---------   69 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcC--CCcEEEEecccCCccCCcCH---------
Confidence            59999999999999999999  579999999996432 22222222221  14577777888775310000         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                     +    .++.+    ..+|++||+||.....   
T Consensus        70 -----------------------------------------------~----~~~~l----~~~D~Vih~Aa~~~~~---   91 (657)
T PRK07201         70 -----------------------------------------------A----DIAEL----GDIDHVVHLAAIYDLT---   91 (657)
T ss_pred             -----------------------------------------------H----HHHHh----cCCCEEEECceeecCC---
Confidence                                                           0    01111    4678888888754221   


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                          ...++..++|+.++..+++.+.    +.+ ..++|++||.+.
T Consensus        92 ----~~~~~~~~~nv~gt~~ll~~a~----~~~-~~~~v~~SS~~v  128 (657)
T PRK07201         92 ----ADEEAQRAANVDGTRNVVELAE----RLQ-AATFHHVSSIAV  128 (657)
T ss_pred             ----CCHHHHHHHHhHHHHHHHHHHH----hcC-CCeEEEEecccc
Confidence                1234567889999888777653    222 478999999754

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.53  E-value=1.2e-06  Score=76.90  Aligned_cols=139  Identities=17%  Similarity=0.181  Sum_probs=91.5

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCe--EEEEec--CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAK--LVLSAR--SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~--V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +.+|||||++=||..+++.+.++...  |+.++.  .....+.+....     ..++..+++.|++|.+.+.++      
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~-----~~~~~~fv~~DI~D~~~v~~~------   69 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE-----DSPRYRFVQGDICDRELVDRL------   69 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh-----cCCCceEEeccccCHHHHHHH------
Confidence            46899999999999999999987643  566654  122222222211     135677788888887766655      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              +++     .++|+++|-|+-++  
T Consensus        70 --------------------------------------------------------~~~-----~~~D~VvhfAAESH--   86 (340)
T COG1088          70 --------------------------------------------------------FKE-----YQPDAVVHFAAESH--   86 (340)
T ss_pred             --------------------------------------------------------HHh-----cCCCeEEEechhcc--
Confidence                                                                    322     26788888777443  


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcc--ccccc-----------CCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSS--IAGIV-----------GAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS--~ag~~-----------~~~~~~~Y~asK  265 (265)
                        .+-+..+=+..+++|+.|++.+..++..+..+    -+.+.+|+  +-|..           |....+.|||||
T Consensus        87 --VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASK  156 (340)
T COG1088          87 --VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASK  156 (340)
T ss_pred             --ccccccChhhhhhcchHHHHHHHHHHHHhccc----ceEEEeccccccccccCCCCCcccCCCCCCCCCcchhh
Confidence              23333444667899999999999988776531    36777776  22222           344568899998

>KOG1371|consensus

Probab=98.52  E-value=1.8e-06  Score=76.71  Aligned_cols=129  Identities=21%  Similarity=0.228  Sum_probs=87.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +++|+||||++=||...+.+|.+.|+.|++++.-.....+.....++....+.++.++..|++|.+.++++         
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kv---------   72 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKL---------   72 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHH---------
Confidence            67899999999999999999999999999998532222222222233222356788888888887776666         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++..     .+|.++|-|+...-++  
T Consensus        73 -----------------------------------------------------F~~~-----~fd~V~Hfa~~~~vge--   92 (343)
T KOG1371|consen   73 -----------------------------------------------------FSEV-----KFDAVMHFAALAAVGE--   92 (343)
T ss_pred             -----------------------------------------------------Hhhc-----CCceEEeehhhhccch--
Confidence                                                                 3332     3777777777554332  


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                        +.++-.+-.+.|+.|.+.+...+    ++.+ ...+|+.||+.
T Consensus        93 --S~~~p~~Y~~nNi~gtlnlLe~~----~~~~-~~~~V~sssat  130 (343)
T KOG1371|consen   93 --SMENPLSYYHNNIAGTLNLLEVM----KAHN-VKALVFSSSAT  130 (343)
T ss_pred             --hhhCchhheehhhhhHHHHHHHH----HHcC-CceEEEeccee
Confidence              22233677888999998866544    4444 57888888754

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.46  E-value=6.5e-07  Score=79.63  Aligned_cols=102  Identities=30%  Similarity=0.387  Sum_probs=68.6

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      .++|||++|=||.++.+.|.+.|..|+.++|+                        .+|++|.+.+.++           
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------------~~dl~d~~~~~~~-----------   46 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS------------------------DLDLTDPEAVAKL-----------   46 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------------CS-TTSHHHHHHH-----------
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------------hcCCCCHHHHHHH-----------
Confidence            58999999999999999999999999888764                        4677777776666           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         +++.     ++|++||+||.......+  
T Consensus        47 ---------------------------------------------------~~~~-----~pd~Vin~aa~~~~~~ce--   68 (286)
T PF04321_consen   47 ---------------------------------------------------LEAF-----KPDVVINCAAYTNVDACE--   68 (286)
T ss_dssp             ---------------------------------------------------HHHH-------SEEEE------HHHHH--
T ss_pred             ---------------------------------------------------HHHh-----CCCeEeccceeecHHhhh--
Confidence                                                               3222     466777777654322111  


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                        ++-+..+++|+.++..+++.+..    .  +.++|++||-.
T Consensus        69 --~~p~~a~~iN~~~~~~la~~~~~----~--~~~li~~STd~  103 (286)
T PF04321_consen   69 --KNPEEAYAINVDATKNLAEACKE----R--GARLIHISTDY  103 (286)
T ss_dssp             --HSHHHHHHHHTHHHHHHHHHHHH----C--T-EEEEEEEGG
T ss_pred             --hChhhhHHHhhHHHHHHHHHHHH----c--CCcEEEeeccE
Confidence              22366889999999888886643    2  57999999964

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.44  E-value=7.9e-07  Score=78.88  Aligned_cols=103  Identities=15%  Similarity=0.126  Sum_probs=69.1

Q ss_pred             EEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccE
Q psy9256          50 WITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDI  129 (265)
Q Consensus        50 lItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldi  129 (265)
                      +||||++-||..+++.|.+.|..|+++.++                       ..+|+++.++++++             
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------------~~~Dl~~~~~l~~~-------------   44 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------------KELDLTRQADVEAF-------------   44 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------------ccCCCCCHHHHHHH-------------
Confidence            699999999999999999999987765322                       13577776665544             


Q ss_pred             EEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccccch
Q psy9256         130 LINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIEL  209 (265)
Q Consensus       130 linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~~  209 (265)
                                                                       ++.     .++|++||+|+........   .
T Consensus        45 -------------------------------------------------~~~-----~~~d~Vih~A~~~~~~~~~---~   67 (306)
T PLN02725         45 -------------------------------------------------FAK-----EKPTYVILAAAKVGGIHAN---M   67 (306)
T ss_pred             -------------------------------------------------Hhc-----cCCCEEEEeeeeecccchh---h
Confidence                                                             222     2467888888753211101   1


Q ss_pred             HHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         210 EVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       210 ~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      ++.++.+++|+.++..+++++..    .+ .+++|++||..
T Consensus        68 ~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~i~~SS~~  103 (306)
T PLN02725         68 TYPADFIRENLQIQTNVIDAAYR----HG-VKKLLFLGSSC  103 (306)
T ss_pred             hCcHHHHHHHhHHHHHHHHHHHH----cC-CCeEEEeCcee
Confidence            12245678899998888876643    22 46899999964

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.40  E-value=2.3e-06  Score=80.61  Aligned_cols=35  Identities=17%  Similarity=0.212  Sum_probs=32.1

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      .+.++||||+|=||..++++|.++|++|+.++|..
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~  154 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF  154 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            45799999999999999999999999999998754

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.38  E-value=2.9e-06  Score=74.76  Aligned_cols=99  Identities=24%  Similarity=0.293  Sum_probs=71.6

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCcc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  128 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld  128 (265)
                      ++|||++|=+|.++++.+. .+..|+.++|..                        +|++|++.+.++            
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------------~Ditd~~~v~~~------------   45 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE------------------------LDITDPDAVLEV------------   45 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------------ccccChHHHHHH------------
Confidence            8999999999999999998 778898877632                        688888777766            


Q ss_pred             EEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccccc
Q psy9256         129 ILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE  208 (265)
Q Consensus       129 ilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~  208 (265)
                                                                        +.+.     ++|++||+|++..--.    -
T Consensus        46 --------------------------------------------------i~~~-----~PDvVIn~AAyt~vD~----a   66 (281)
T COG1091          46 --------------------------------------------------IRET-----RPDVVINAAAYTAVDK----A   66 (281)
T ss_pred             --------------------------------------------------HHhh-----CCCEEEECcccccccc----c
Confidence                                                              3332     4666666666542211    1


Q ss_pred             hHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccc
Q psy9256         209 LEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSI  249 (265)
Q Consensus       209 ~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~  249 (265)
                      ..+-+..+.+|..|+.+++++.-..      +-.+|++||=
T Consensus        67 E~~~e~A~~vNa~~~~~lA~aa~~~------ga~lVhiSTD  101 (281)
T COG1091          67 ESEPELAFAVNATGAENLARAAAEV------GARLVHISTD  101 (281)
T ss_pred             cCCHHHHHHhHHHHHHHHHHHHHHh------CCeEEEeecc
Confidence            1223778999999999999966432      5788999974

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.36  E-value=2.5e-06  Score=73.52  Aligned_cols=77  Identities=17%  Similarity=0.225  Sum_probs=49.4

Q ss_pred             cEEEEcCCCCc-hhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSG-IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      .+-.||..|+| ||.++|++|+++|++|++++|+.....        .  ...++.++.+     ++.....+.+.+..+
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--------~--~~~~v~~i~v-----~s~~~m~~~l~~~~~   80 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--------E--PHPNLSIIEI-----ENVDDLLETLEPLVK   80 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--------C--CCCCeEEEEE-----ecHHHHHHHHHHHhc
Confidence            35678877777 999999999999999999987532100        0  0123444443     223333344445556


Q ss_pred             CccEEEeCCCCCc
Q psy9256         126 CLDILINNAGRSQ  138 (265)
Q Consensus       126 ~ldilinnAg~~~  138 (265)
                      +.|++|||||++.
T Consensus        81 ~~DivIh~AAvsd   93 (229)
T PRK06732         81 DHDVLIHSMAVSD   93 (229)
T ss_pred             CCCEEEeCCccCC
Confidence            7788888888654

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.30  E-value=1.1e-05  Score=78.53  Aligned_cols=146  Identities=15%  Similarity=0.158  Sum_probs=84.2

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC---eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA---KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ++||+++||||++=||..++++|++.+.   +|++..|.........+...+...                  ..+++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~------------------~~lf~~l  178 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVID------------------AELFKCL  178 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhh------------------hhhHHHH
Confidence            5799999999999999999999998653   578888865433222221111100                  0111111


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChh-----HHHHHHHHHHhhcccccEEEec
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTK-----YHRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~-----~v~~~~~~i~~~~g~ldilVnn  195 (265)
                      ++.+|..                          ...-...++..+..|++++.     +.   .+.+.   .++|++||.
T Consensus       179 ~~~~g~~--------------------------~~~~~~~Ki~~v~GDl~d~~LGLs~~~---~~~L~---~~vDiVIH~  226 (605)
T PLN02503        179 QETHGKS--------------------------YQSFMLSKLVPVVGNVCESNLGLEPDL---ADEIA---KEVDVIINS  226 (605)
T ss_pred             HHhcCcc--------------------------ccccccccEEEEEeeCCCcccCCCHHH---HHHHH---hcCCEEEEC
Confidence            1111100                          00000234555555666541     21   12222   248999999


Q ss_pred             ccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         196 AGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       196 AG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      |+....       .++.++.+++|+.|+..++..+...    +...++|++||..
T Consensus       227 AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~----~~lk~fV~vSTay  270 (605)
T PLN02503        227 AANTTF-------DERYDVAIDINTRGPCHLMSFAKKC----KKLKLFLQVSTAY  270 (605)
T ss_pred             cccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc----CCCCeEEEccCce
Confidence            986531       1346778999999999988865432    1135788888854

>PLN02778 3,5-epimerase/4-reductase

Probab=98.29  E-value=8.1e-06  Score=72.99  Aligned_cols=30  Identities=20%  Similarity=0.174  Sum_probs=27.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEE
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVL   75 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~   75 (265)
                      .+.++||||+|=||..++++|.++|.+|+.
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~   38 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHY   38 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEE
Confidence            367999999999999999999999999864

>PLN02996 fatty acyl-CoA reductase

Probab=98.25  E-value=1.4e-05  Score=76.50  Aligned_cols=147  Identities=17%  Similarity=0.208  Sum_probs=83.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC---eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA---KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .++||+++||||+|=||..++++|++.+.   +|++..|.........+...+.-              +.+.    ++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~--------------~~~~----f~~   69 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVI--------------GKDL----FKV   69 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHh--------------hchH----HHH
Confidence            46799999999999999999999987643   57888886543222211110100              0000    111


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccCh-------hHHHHHHHHHHhhcccccEE
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQT-------KYHRRCFDAVIQQFGCLDIL  192 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~-------~~v~~~~~~i~~~~g~ldil  192 (265)
                      ..+..+.                      .   . ..-...++..+..|++++       +..+.++       ..+|++
T Consensus        70 ~~~~~~~----------------------~---~-~~~~~~kv~~i~GDl~~~~LGLs~~~~~~~l~-------~~vD~V  116 (491)
T PLN02996         70 LREKLGE----------------------N---L-NSLISEKVTPVPGDISYDDLGVKDSNLREEMW-------KEIDIV  116 (491)
T ss_pred             HHHhcch----------------------h---h-hhhhhcCEEEEecccCCcCCCCChHHHHHHHH-------hCCCEE
Confidence            1111000                      0   0 000013455566666532       2222222       258999


Q ss_pred             EecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         193 INNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       193 VnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      ||+|+....       .++.++.+++|+.|+..+.+.+...   .+ ..++|++||...
T Consensus       117 iH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~k~~V~vST~~v  164 (491)
T PLN02996        117 VNLAATTNF-------DERYDVALGINTLGALNVLNFAKKC---VK-VKMLLHVSTAYV  164 (491)
T ss_pred             EECccccCC-------cCCHHHHHHHHHHHHHHHHHHHHhc---CC-CCeEEEEeeeEE
Confidence            999986532       1245678899999999988866432   11 358899888654

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.24  E-value=7.4e-06  Score=71.99  Aligned_cols=35  Identities=34%  Similarity=0.470  Sum_probs=32.2

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcH
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNL   83 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~   83 (265)
                      ++||||++-||..+++.|+++|++|+.++|+++..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   35 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAG   35 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence            58999999999999999999999999999987654

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.21  E-value=8.7e-06  Score=68.14  Aligned_cols=85  Identities=13%  Similarity=0.187  Sum_probs=64.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++++++++|.||++++|..+++.|++.|++|++++|+.++++++.+.+.+..    ......+|..+.+++.+.+    
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~----   95 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF----GEGVGAVETSDDAARAAAI----   95 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc----CCcEEEeeCCCHHHHHHHH----
Confidence            36789999999999999999999999999999999999877777666554322    2234567888776655442    


Q ss_pred             HHhCCccEEEeCCCCC
Q psy9256         122 QQFGCLDILINNAGRS  137 (265)
Q Consensus       122 ~~~g~ldilinnAg~~  137 (265)
                         .+-|++|+.....
T Consensus        96 ---~~~diVi~at~~g  108 (194)
T cd01078          96 ---KGADVVFAAGAAG  108 (194)
T ss_pred             ---hcCCEEEECCCCC
Confidence               4568888876543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.20  E-value=8.4e-06  Score=71.93  Aligned_cols=74  Identities=15%  Similarity=0.164  Sum_probs=56.7

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC-c
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC-L  127 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-l  127 (265)
                      ++||||+|.+|..++++|.+.|++|.+..|+++....            ..+..+.+|..|++++...++.. +.... .
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~------------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG------------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC------------CCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence            7999999999999999999999999999998764321            23445678999999888775442 22333 7


Q ss_pred             cEEEeCCC
Q psy9256         128 DILINNAG  135 (265)
Q Consensus       128 dilinnAg  135 (265)
                      |.++++++
T Consensus        69 d~v~~~~~   76 (285)
T TIGR03649        69 SAVYLVAP   76 (285)
T ss_pred             eEEEEeCC
Confidence            77777665

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.14  E-value=2.4e-05  Score=67.98  Aligned_cols=122  Identities=20%  Similarity=0.192  Sum_probs=67.0

Q ss_pred             EcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCC----------CCCcEEEEeecCCChHH-HHHHH
Q psy9256          51 ITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGA----------HPQSIYTLTLDVTQTKY-HRRCF  117 (265)
Q Consensus        51 ItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~-~~~~~  117 (265)
                      ||||+|=+|..+.++|++.+.  +|++..|.....+...+.......          ...++.++..|++++.- +..  
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~--   78 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSD--   78 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--H--
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCCh--
Confidence            799999999999999999876  899999976543332222111110          13466666666666531 000  


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                             ++    ++++.   .++|+++|+|+
T Consensus        79 -------------------------------------------------------~~----~~~L~---~~v~~IiH~Aa   96 (249)
T PF07993_consen   79 -------------------------------------------------------ED----YQELA---EEVDVIIHCAA   96 (249)
T ss_dssp             -------------------------------------------------------HH----HHHHH---HH--EEEE--S
T ss_pred             -------------------------------------------------------HH----hhccc---cccceeeecch
Confidence                                                                   00    22222   36899999988


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcc
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSS  248 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS  248 (265)
                      .....       ...++..++|+.|+..+++.+..    .+ ..+++++||
T Consensus        97 ~v~~~-------~~~~~~~~~NV~gt~~ll~la~~----~~-~~~~~~iST  135 (249)
T PF07993_consen   97 SVNFN-------APYSELRAVNVDGTRNLLRLAAQ----GK-RKRFHYIST  135 (249)
T ss_dssp             S-SBS--------S--EEHHHHHHHHHHHHHHHTS----SS----EEEEEE
T ss_pred             hhhhc-------ccchhhhhhHHHHHHHHHHHHHh----cc-CcceEEecc
Confidence            64221       13455788899999998886642    22 349999999

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK12320 hypothetical protein; Provisional

Probab=98.05  E-value=4.4e-05  Score=75.49  Aligned_cols=68  Identities=16%  Similarity=0.184  Sum_probs=48.8

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      .++||||++-||..++++|.++|++|++++|+....            ...++.++..|++++. +..+       ..+.
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------------~~~~ve~v~~Dl~d~~-l~~a-------l~~~   61 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------------LDPRVDYVCASLRNPV-LQEL-------AGEA   61 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------------ccCCceEEEccCCCHH-HHHH-------hcCC
Confidence            489999999999999999999999999999864321            0135667888988863 2222       1235


Q ss_pred             cEEEeCCC
Q psy9256         128 DILINNAG  135 (265)
Q Consensus       128 dilinnAg  135 (265)
                      |.+||.|+
T Consensus        62 D~VIHLAa   69 (699)
T PRK12320         62 DAVIHLAP   69 (699)
T ss_pred             CEEEEcCc
Confidence            56666655

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.97  E-value=0.00027  Score=67.73  Aligned_cols=168  Identities=17%  Similarity=0.152  Sum_probs=102.0

Q ss_pred             ccCCcEEEEcCCCCc-hhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHH-hCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSG-IGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQ-AGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        43 ~l~gk~vlItGas~G-IG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ...+++++|||++.| ||.+++.+|+..|++|+++..+.+ ...+-.+.+.. ....+..+.+++.+.++..+++++++.
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            457899999999875 999999999999999999854432 22222333333 333467788899999999999999777


Q ss_pred             HHHHh----CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEec
Q psy9256         120 VIQQF----GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       120 ~~~~~----g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn  195 (265)
                      +=.+.    |.-.+.|                                                    +.-..+|.++=-
T Consensus       473 Ig~eq~~t~g~~s~~~----------------------------------------------------k~a~~ptll~PF  500 (866)
T COG4982         473 IGDEQTETVGPQSIHI----------------------------------------------------KLAWTPTLLFPF  500 (866)
T ss_pred             hccccccccCCcceec----------------------------------------------------ccccCcceeeec
Confidence            63221    1111111                                                    011256777777


Q ss_pred             ccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC--CceEEEEccc-ccccCCCCCCccccCC
Q psy9256         196 AGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ--GGHLVVTSSI-AGIVGAPYSGSYTDHL  265 (265)
Q Consensus       196 AG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~--~g~IV~isS~-ag~~~~~~~~~Y~asK  265 (265)
                      |.....+.+.+..++ -+..+++-+.+..+++-.+.+.=-.++-  +-++|.=.|- .|.  +.+-++|+-||
T Consensus       501 AAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSPNrG~--FGgDGaYgEsK  570 (866)
T COG4982         501 AAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPNRGM--FGGDGAYGESK  570 (866)
T ss_pred             ccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCCCCCc--cCCCcchhhHH
Confidence            776666666666543 2555666666666666555443222211  1244444442 222  23456787766

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.95  E-value=3.4e-05  Score=72.77  Aligned_cols=77  Identities=23%  Similarity=0.288  Sum_probs=57.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++++|.++|+|+++ +|.++|+.|++.|++|++.+++. +..++..+++.+.     .+.++..|..+            
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~------------   63 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL-----GIELVLGEYPE------------   63 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-----CCEEEeCCcch------------
Confidence            57899999999877 99999999999999999999865 3333333333222     24456677665            


Q ss_pred             HHhCCccEEEeCCCCC
Q psy9256         122 QQFGCLDILINNAGRS  137 (265)
Q Consensus       122 ~~~g~ldilinnAg~~  137 (265)
                      +..++.|++|+++|+.
T Consensus        64 ~~~~~~d~vv~~~g~~   79 (450)
T PRK14106         64 EFLEGVDLVVVSPGVP   79 (450)
T ss_pred             hHhhcCCEEEECCCCC
Confidence            2346799999999984

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.94  E-value=7.7e-05  Score=73.90  Aligned_cols=29  Identities=24%  Similarity=0.185  Sum_probs=25.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeE
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKL   73 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V   73 (265)
                      ..+.++||||+|=||..++++|.++|++|
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v  407 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAY  407 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeE
Confidence            34579999999999999999999999887

>KOG1202|consensus

Probab=97.94  E-value=3.6e-05  Score=77.99  Aligned_cols=154  Identities=19%  Similarity=0.160  Sum_probs=110.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +.|..+|+||-+|.|+++|..|.++|++ +++++|+--+----...+..+...+-++.+-..|++..+..+.+       
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~L------- 1839 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGL------- 1839 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHH-------
Confidence            5789999999999999999999999997 77888864332222223333333344554444555554444444       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             +++. .+.+.+..++|-|.....+-
T Consensus      1840 -------------------------------------------------------i~~s-~kl~~vGGiFnLA~VLRD~L 1863 (2376)
T KOG1202|consen 1840 -------------------------------------------------------IEES-NKLGPVGGIFNLAAVLRDGL 1863 (2376)
T ss_pred             -------------------------------------------------------HHHh-hhcccccchhhHHHHHHhhh
Confidence                                                                   4433 35588899999999999999


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDH  264 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~as  264 (265)
                      +++.++++++.+-+-.+.|+.++=+.--.....   -.-.|.+||++.-++..+++-|+-+
T Consensus      1864 iEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~---LdyFv~FSSvscGRGN~GQtNYG~a 1921 (2376)
T KOG1202|consen 1864 IENQTPKNFKDVAKPKYSGTINLDRVSREICPE---LDYFVVFSSVSCGRGNAGQTNYGLA 1921 (2376)
T ss_pred             hcccChhHHHhhhccceeeeeehhhhhhhhCcc---cceEEEEEeecccCCCCcccccchh
Confidence            999999999999999999988765433222211   2467889999999999999988753

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.89  E-value=0.0001  Score=67.08  Aligned_cols=116  Identities=21%  Similarity=0.180  Sum_probs=79.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHc-C-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKC-G-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ++.+|+++||||++.||..++++|+++ | .++++++|++++++.+.+++..            .|+.+          .
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~------------~~i~~----------l  209 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG------------GKILS----------L  209 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc------------ccHHh----------H
Confidence            689999999999999999999999864 5 4799999987766665543210            12111          2


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                      .+...+.|++|+.|+......   .+.+..          +-..+.||++-|.++...+       .+.|+.+.+.|...
T Consensus       210 ~~~l~~aDiVv~~ts~~~~~~---I~~~~l----------~~~~~viDiAvPRDVd~~v-------~~~~V~v~~gG~V~  269 (340)
T PRK14982        210 EEALPEADIVVWVASMPKGVE---IDPETL----------KKPCLMIDGGYPKNLDTKV-------QGPGIHVLKGGIVE  269 (340)
T ss_pred             HHHHccCCEEEECCcCCcCCc---CCHHHh----------CCCeEEEEecCCCCCCccc-------CCCCEEEEeCCccc
Confidence            245567899999998754321   111111          1236788999888876533       24788898888653

>KOG1430|consensus

Probab=97.88  E-value=0.0001  Score=67.30  Aligned_cols=128  Identities=15%  Similarity=0.134  Sum_probs=82.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++.+++||||++=+|..++++|.+.+  ..+.+.+..+...+--.+..   +.+..++.++.+|+.+..++.+.     
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~---~~~~~~v~~~~~D~~~~~~i~~a-----   73 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT---GFRSGRVTVILGDLLDANSISNA-----   73 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh---cccCCceeEEecchhhhhhhhhh-----
Confidence            356799999999999999999999988  77888877653211111111   11346777777888776655444     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                                      +... .+||.|....+
T Consensus        74 ----------------------------------------------------------------~~~~-~Vvh~aa~~~~   88 (361)
T KOG1430|consen   74 ----------------------------------------------------------------FQGA-VVVHCAASPVP   88 (361)
T ss_pred             ----------------------------------------------------------------ccCc-eEEEeccccCc
Confidence                                                                            2233 45555553322


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      .    .-..+-+..+++|+.|+-.+.....    +.+ ..++|++||..-.+
T Consensus        89 ~----~~~~~~~~~~~vNV~gT~nvi~~c~----~~~-v~~lIYtSs~~Vvf  131 (361)
T KOG1430|consen   89 D----FVENDRDLAMRVNVNGTLNVIEACK----ELG-VKRLIYTSSAYVVF  131 (361)
T ss_pred             c----ccccchhhheeecchhHHHHHHHHH----HhC-CCEEEEecCceEEe
Confidence            2    2222457789999999776666543    333 57999999976554

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=97.88  E-value=0.00015  Score=77.34  Aligned_cols=40  Identities=23%  Similarity=0.248  Sum_probs=33.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcC----CeEEEEecCCCcHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCG----AKLVLSARSSSNLE   84 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G----~~V~~~~r~~~~~~   84 (265)
                      ..++++|||+++-+|..++++|.+.+    .+|++..|+....+
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~ 1013 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEA 1013 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHH
Confidence            35789999999999999999999877    78998888765443

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.77  E-value=0.00011  Score=58.10  Aligned_cols=83  Identities=24%  Similarity=0.356  Sum_probs=60.1

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      +...+++++.++|.|+ ||.|+++++.|+..|++ |+++.|+.++++++.+.+   +  ...+.+.  +..+..      
T Consensus         5 ~~~~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~---~--~~~~~~~--~~~~~~------   70 (135)
T PF01488_consen    5 KKFGDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF---G--GVNIEAI--PLEDLE------   70 (135)
T ss_dssp             THHSTGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH---T--GCSEEEE--EGGGHC------
T ss_pred             HhcCCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc---C--cccccee--eHHHHH------
Confidence            3445899999999998 89999999999999998 999999988887777665   1  1223333  333322      


Q ss_pred             HHHHHHhCCccEEEeCCCCCcc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQR  139 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~  139 (265)
                          +.....|++||+.+...+
T Consensus        71 ----~~~~~~DivI~aT~~~~~   88 (135)
T PF01488_consen   71 ----EALQEADIVINATPSGMP   88 (135)
T ss_dssp             ----HHHHTESEEEE-SSTTST
T ss_pred             ----HHHhhCCeEEEecCCCCc
Confidence                223567999999886544

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG4169|consensus

Probab=97.77  E-value=0.0001  Score=62.67  Aligned_cols=41  Identities=37%  Similarity=0.546  Sum_probs=38.8

Q ss_pred             CcEEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCc
Q psy9256          98 QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  138 (265)
Q Consensus        98 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~  138 (265)
                      .++.+++||+++..++++.++++..++|++|++|||||+..
T Consensus        55 ~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~   95 (261)
T KOG4169|consen   55 VSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILD   95 (261)
T ss_pred             ceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEccccccc
Confidence            57899999999999999999999999999999999999864

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.74  E-value=9.3e-05  Score=64.92  Aligned_cols=72  Identities=22%  Similarity=0.117  Sum_probs=51.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhC-CCCCcEEEEeecCCChHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG-AHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ++|++||||-++==|.-+|+.|.++|+.|.-+.|+.+..+.-.-.+.+.+ ....+++.+..|++|..++.++
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~   73 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRI   73 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHH
Confidence            36899999999999999999999999999999887543332211111111 1234577777888887777766

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=97.71  E-value=0.00026  Score=61.97  Aligned_cols=116  Identities=20%  Similarity=0.228  Sum_probs=76.6

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh-CCc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF-GCL  127 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~l  127 (265)
                      ++||||++=||.+++.+|.+.|+.|++..|+++..+.....                .+...+.+       .... ...
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~----------------~v~~~~~~-------~~~~~~~~   57 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP----------------NVTLWEGL-------ADALTLGI   57 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc----------------cccccchh-------hhcccCCC
Confidence            58999999999999999999999999999988765432110                00111111       1112 279


Q ss_pred             cEEEeCCCCCcccc-cchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         128 DILINNAGRSQRAA-WEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       128 dilinnAg~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                      |.+||=||-.-..+ +...-.+.....                 --...+++++.+.+...++.++|+..++.+.+.-
T Consensus        58 DavINLAG~~I~~rrWt~~~K~~i~~S-----------------Ri~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~  118 (297)
T COG1090          58 DAVINLAGEPIAERRWTEKQKEEIRQS-----------------RINTTEKLVELIAASETKPKVLISASAVGYYGHS  118 (297)
T ss_pred             CEEEECCCCccccccCCHHHHHHHHHH-----------------HhHHHHHHHHHHHhccCCCcEEEecceEEEecCC
Confidence            99999999865554 333333332221                 1234566777787777889999998887665543

>PLN00016 RNA-binding protein; Provisional

Probab=97.70  E-value=0.00016  Score=66.71  Aligned_cols=39  Identities=33%  Similarity=0.387  Sum_probs=35.1

Q ss_pred             cCCcEEEEc----CCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          44 FNNKVVWIT----GASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        44 l~gk~vlIt----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      ...+.++||    ||++-||..++++|.++|++|+++.|+.+.
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~   92 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP   92 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence            445789999    999999999999999999999999998754

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.70  E-value=9.6e-05  Score=68.15  Aligned_cols=77  Identities=22%  Similarity=0.381  Sum_probs=62.6

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +.++|.|| +++|..+|+.|++.| .+|++++|+.++.++.....      ..++.+.++|+.+.+.+.++++.      
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~------~~~v~~~~vD~~d~~al~~li~~------   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI------GGKVEALQVDAADVDALVALIKD------   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc------cccceeEEecccChHHHHHHHhc------
Confidence            45788888 999999999999999 88999999988877765543      24788999999999887766332      


Q ss_pred             CccEEEeCCCCC
Q psy9256         126 CLDILINNAGRS  137 (265)
Q Consensus       126 ~ldilinnAg~~  137 (265)
                       .|++||.++..
T Consensus        69 -~d~VIn~~p~~   79 (389)
T COG1748          69 -FDLVINAAPPF   79 (389)
T ss_pred             -CCEEEEeCCch
Confidence             29999999853

>KOG2733|consensus

Probab=97.65  E-value=0.00087  Score=60.56  Aligned_cols=165  Identities=15%  Similarity=0.085  Sum_probs=102.2

Q ss_pred             EEEEcCCCCchhHHHHHHHHH----cCCeEEEEecCCCcHHHHHHHHHHhCCC-CCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSK----CGAKLVLSARSSSNLERVKNLCVQAGAH-PQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~----~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      -++|-|||+=-|.-+++++.+    .|-+..+.+|++++++++.+...+.... -.....+.||.+|++++++.+...  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~--   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA--   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence            478999999999999999998    7888999999999999988887665432 133348899999999998885443  


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccCh-hHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQT-KYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~-~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                           -++||++|-.+.     -.+...+++..-..      ...|++-+ +-.+.+..+--+...+=.+.|.+|...  
T Consensus        85 -----~vivN~vGPyR~-----hGE~VVkacienG~------~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVsaCGf--  146 (423)
T KOG2733|consen   85 -----RVIVNCVGPYRF-----HGEPVVKACIENGT------HHVDISGEPQFMERMQLKYHDLAKEKGVYIVSACGF--  146 (423)
T ss_pred             -----EEEEecccccee-----cCcHHHHHHHHcCC------ceeccCCCHHHHHHHHHHHHHHHHhcCeEEEeeccc--
Confidence                 589999994222     22333444433222      34577755 444444433333333444555555432  


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhh
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFL  235 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~  235 (265)
                         ++++.|-+-...+-|..|.+.-+-.++.+..
T Consensus       147 ---DSIPaDlGv~f~~k~fdg~ln~VEsfl~Lh~  177 (423)
T KOG2733|consen  147 ---DSIPADLGVMFLRKNFDGVLNHVESFLQLHS  177 (423)
T ss_pred             ---CCCCccceeeeehhhccccHHHHHHHHhhhc
Confidence               2233333333333344454444455555443

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.62  E-value=0.00047  Score=57.49  Aligned_cols=133  Identities=22%  Similarity=0.238  Sum_probs=72.6

Q ss_pred             cCCcEEEEcCC----------------CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecC
Q psy9256          44 FNNKVVWITGA----------------SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV  107 (265)
Q Consensus        44 l~gk~vlItGa----------------s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~  107 (265)
                      |+||.++||+|                ||-+|.++|+.+...|++|+++.... ..+.           +..+..  .++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~~-----------p~~~~~--i~v   66 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SLPP-----------PPGVKV--IRV   66 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S---------------TTEEE--EE-
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-cccc-----------cccceE--EEe
Confidence            57899999988                56699999999999999999987653 2110           123322  234


Q ss_pred             CChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhH------------------HHHHh-hhcccCCceeeeecc
Q psy9256         108 TQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE------------------VDREL-FTYAYRPSIYTLTLD  168 (265)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~------------------~~~~~-~~~~~~~~v~~~~~d  168 (265)
                      .+   ...+.+.+.+....-|++|++|+++........+.+                  ....+ ....++.-+..++..
T Consensus        67 ~s---a~em~~~~~~~~~~~Di~I~aAAVsDf~p~~~~~~KIkK~~~~~l~l~L~~~pkIL~~l~~~~~~~~~lVGFkaE  143 (185)
T PF04127_consen   67 ES---AEEMLEAVKELLPSADIIIMAAAVSDFRPEEPAEGKIKKSSGDELTLELKPTPKILAELRKNKKPNQFLVGFKAE  143 (185)
T ss_dssp             SS---HHHHHHHHHHHGGGGSEEEE-SB--SEEESCHHSS-G---TT-CEEEEEEE-GGHGCCHHHHCSTTTEEEEEEEE
T ss_pred             cc---hhhhhhhhccccCcceeEEEecchhheeehhccccccccccCcceEEEEEeChHHHHHHHhcccCCcEEEEEEec
Confidence            44   445555666667766999999999754432222222                  22222 223344557777777


Q ss_pred             ccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         169 VTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       169 v~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                      . + +-.+.+.+.+.+  ..+|.+|.|--
T Consensus       144 t-~-~l~~~A~~kl~~--k~~D~IVaN~~  168 (185)
T PF04127_consen  144 T-E-ELIENAKEKLER--KGADLIVANDL  168 (185)
T ss_dssp             S-C-HHHHHHHHHHHH--CT-SEEEEEEG
T ss_pred             C-C-cHHHHHHHHhHh--hCCCEEEEeCC
Confidence            5 3 333333333322  57899988743

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.61  E-value=0.00019  Score=66.40  Aligned_cols=76  Identities=22%  Similarity=0.364  Sum_probs=57.0

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          49 VWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      ++|.|| +.+|..+++.|++.+.  +|++.+|+.++++++.+.+     ...++...++|+.|.+++.++       ..+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~l~~~-------~~~   67 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-----LGDRVEAVQVDVNDPESLAEL-------LRG   67 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-------TTTTEEEEE--TTTHHHHHHH-------HTT
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-----cccceeEEEEecCCHHHHHHH-------Hhc
Confidence            578899 9999999999998874  7999999988877766544     347899999999999887666       344


Q ss_pred             ccEEEeCCCCC
Q psy9256         127 LDILINNAGRS  137 (265)
Q Consensus       127 ldilinnAg~~  137 (265)
                      -|++||++|-.
T Consensus        68 ~dvVin~~gp~   78 (386)
T PF03435_consen   68 CDVVINCAGPF   78 (386)
T ss_dssp             SSEEEE-SSGG
T ss_pred             CCEEEECCccc
Confidence            59999999954

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1221|consensus

Probab=97.54  E-value=0.0008  Score=63.34  Aligned_cols=147  Identities=14%  Similarity=0.154  Sum_probs=85.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC---eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA---KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+.||+++||||+|-+|+-+.+++++.-.   ++++.=|.. +.+...+.+....                  -+.+|+.
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k-~g~~~~~Rl~~~~------------------~~~lF~~   69 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAK-KGKAAQERLRTEL------------------KDPLFEV   69 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecC-CCCCHHHHHHHHH------------------hhhHHHH
Confidence            46899999999999999999999997542   466665543 2222222222111                  1144555


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhH-HHHHHHHHHhhcccccEEEecccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKY-HRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~-v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                      .++..|.                               ...++..+..|++++.- +..  ........++|+++|.|+.
T Consensus        70 l~~~~p~-------------------------------~l~Kv~pi~GDi~~~~LGis~--~D~~~l~~eV~ivih~AAt  116 (467)
T KOG1221|consen   70 LKEKKPE-------------------------------ALEKVVPIAGDISEPDLGISE--SDLRTLADEVNIVIHSAAT  116 (467)
T ss_pred             HHhhCcc-------------------------------ceecceeccccccCcccCCCh--HHHHHHHhcCCEEEEeeee
Confidence            5544432                               01233333334332210 000  0001123579999999985


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      ..       -.+..+....+|..|+..+.+.+.... +   -...+.+|+.-..
T Consensus       117 vr-------Fde~l~~al~iNt~Gt~~~l~lak~~~-~---l~~~vhVSTAy~n  159 (467)
T KOG1221|consen  117 VR-------FDEPLDVALGINTRGTRNVLQLAKEMV-K---LKALVHVSTAYSN  159 (467)
T ss_pred             ec-------cchhhhhhhhhhhHhHHHHHHHHHHhh-h---hheEEEeehhhee
Confidence            42       235567789999999999998555443 2   2477888886555

>PRK09620 hypothetical protein; Provisional

Probab=97.50  E-value=0.003  Score=54.43  Aligned_cols=36  Identities=28%  Similarity=0.340  Sum_probs=32.0

Q ss_pred             cCCcEEEEcCCC----------------CchhHHHHHHHHHcCCeEEEEecC
Q psy9256          44 FNNKVVWITGAS----------------SGIGEALALQLSKCGAKLVLSARS   79 (265)
Q Consensus        44 l~gk~vlItGas----------------~GIG~aia~~l~~~G~~V~~~~r~   79 (265)
                      |.||.++||+|+                |-+|..+|++|..+|+.|+++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            479999999885                779999999999999999988753

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.42  E-value=0.0024  Score=58.32  Aligned_cols=131  Identities=21%  Similarity=0.220  Sum_probs=82.6

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhC-------CCCCcEEEEeecCCChHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAG-------AHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +++++|||++=+|.-+.++|+.. .++|++.-|-.+......+..+.+.       ....++..+..|++.++-      
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~l------   74 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDL------   74 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccC------
Confidence            57999999999999988888765 4699999886653333333222222       235677777788775531      


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                               ..+.+.                             ++++   -+.+|.++||++.
T Consensus        75 -------------------------GL~~~~-----------------------------~~~L---a~~vD~I~H~gA~   97 (382)
T COG3320          75 -------------------------GLSERT-----------------------------WQEL---AENVDLIIHNAAL   97 (382)
T ss_pred             -------------------------CCCHHH-----------------------------HHHH---hhhcceEEecchh
Confidence                                     111111                             2222   1458899998885


Q ss_pred             c-ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         199 S-QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       199 ~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      . +..        ...+....|+.|.--+++.+.-     ++...+.++||++-..
T Consensus        98 Vn~v~--------pYs~L~~~NVlGT~evlrLa~~-----gk~Kp~~yVSsisv~~  140 (382)
T COG3320          98 VNHVF--------PYSELRGANVLGTAEVLRLAAT-----GKPKPLHYVSSISVGE  140 (382)
T ss_pred             hcccC--------cHHHhcCcchHhHHHHHHHHhc-----CCCceeEEEeeeeecc
Confidence            3 222        3356677899998887775432     2235688999976543

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.33  E-value=0.0012  Score=58.10  Aligned_cols=78  Identities=26%  Similarity=0.385  Sum_probs=55.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ..+|.++|+|+ +|+|+++++.|++.|++|.+.+|++++.+++.+.+...+    .......|     .         ..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~----~~~~~~~~-----~---------~~  175 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG----EIQAFSMD-----E---------LP  175 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC----ceEEechh-----h---------hc
Confidence            46889999999 599999999999999999999998877777666553321    12222111     1         11


Q ss_pred             hCCccEEEeCCCCCccc
Q psy9256         124 FGCLDILINNAGRSQRA  140 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~  140 (265)
                      .++.|++||+.+..-..
T Consensus       176 ~~~~DivInatp~gm~~  192 (270)
T TIGR00507       176 LHRVDLIINATSAGMSG  192 (270)
T ss_pred             ccCccEEEECCCCCCCC
Confidence            24689999999985433

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.32  E-value=0.0012  Score=52.72  Aligned_cols=78  Identities=23%  Similarity=0.334  Sum_probs=55.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +++++.++|+|+ +++|.++++.+.+.| ..|++++|++++.++..+......        +..+.++.+..        
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~--------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG--------IAIAYLDLEEL--------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--------cceeecchhhc--------
Confidence            467889999998 799999999999986 789999998877666555432110        12233333221        


Q ss_pred             HHhCCccEEEeCCCCCcc
Q psy9256         122 QQFGCLDILINNAGRSQR  139 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~  139 (265)
                        .++.|++|++.+....
T Consensus        79 --~~~~Dvvi~~~~~~~~   94 (155)
T cd01065          79 --LAEADLIINTTPVGMK   94 (155)
T ss_pred             --cccCCEEEeCcCCCCC
Confidence              4678999999987554

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.27  E-value=0.0017  Score=55.46  Aligned_cols=76  Identities=14%  Similarity=0.152  Sum_probs=56.1

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCcc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  128 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld  128 (265)
                      ++|+||+|.+|..+++.|.+.+++|.+..|+...  +....+...     .+..+..|..|++++.+.       +.+.|
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~-----g~~vv~~d~~~~~~l~~a-------l~g~d   66 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL-----GAEVVEADYDDPESLVAA-------LKGVD   66 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT-----TTEEEES-TT-HHHHHHH-------HTTCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc-----cceEeecccCCHHHHHHH-------HcCCc
Confidence            6899999999999999999999999999998722  122233333     245679999998876655       56888


Q ss_pred             EEEeCCCCCc
Q psy9256         129 ILINNAGRSQ  138 (265)
Q Consensus       129 ilinnAg~~~  138 (265)
                      .++.+-+...
T Consensus        67 ~v~~~~~~~~   76 (233)
T PF05368_consen   67 AVFSVTPPSH   76 (233)
T ss_dssp             EEEEESSCSC
T ss_pred             eEEeecCcch
Confidence            8888887543

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.26  E-value=0.00061  Score=64.18  Aligned_cols=79  Identities=19%  Similarity=0.204  Sum_probs=52.1

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +.||+++|||+++ +|.+.|+.|++.|++|++.+++........+.+.+.+   .+  +...  .++..+  +       
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g---~~--~~~~--~~~~~~--~-------   65 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEG---IK--VICG--SHPLEL--L-------   65 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcC---CE--EEeC--CCCHHH--h-------
Confidence            5789999999976 9999999999999999999877644444333343322   11  1111  111111  0       


Q ss_pred             hCCccEEEeCCCCCcc
Q psy9256         124 FGCLDILINNAGRSQR  139 (265)
Q Consensus       124 ~g~ldilinnAg~~~~  139 (265)
                      ..++|++|+++|+...
T Consensus        66 ~~~~d~vV~s~gi~~~   81 (447)
T PRK02472         66 DEDFDLMVKNPGIPYT   81 (447)
T ss_pred             cCcCCEEEECCCCCCC
Confidence            1148999999998644

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.22  E-value=0.003  Score=53.15  Aligned_cols=65  Identities=29%  Similarity=0.335  Sum_probs=48.2

Q ss_pred             ccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccccc-hHHHHhhhhhhhhHHH
Q psy9256         157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE-LEVDRELFELNVFSVL  224 (265)
Q Consensus       157 ~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~-~~~~~~~~~~N~~~~~  224 (265)
                      +.........||+.|.++.+++++++.+.+..++++|||||+...   .+.+ .++..+..+.-+.--+
T Consensus        47 ~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~---~dlt~~e~~~~~~~~eI~~Nl  112 (245)
T COG3967          47 AENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRN---EDLTGAEDLLDDAEQEIATNL  112 (245)
T ss_pred             hcCcchheeeecccchhhHHHHHHHHHhhCCchheeeecccccch---hhccCCcchhhHHHHHHHHhh
Confidence            345677889999999999999999999999999999999997533   3444 4444444443333333

>KOG1205|consensus

Probab=97.17  E-value=0.0033  Score=55.72  Aligned_cols=111  Identities=23%  Similarity=0.325  Sum_probs=70.1

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          48 VVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      .+++.+...-+.. +++++.+.+.  +|...--+-...+++.+-...                       +    ..++|
T Consensus        39 l~lvar~~rrl~~-v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~-----------------------~----~~~fg   90 (282)
T KOG1205|consen   39 LVLVARRARRLER-VAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW-----------------------A----IRHFG   90 (282)
T ss_pred             eEEeehhhhhHHH-HHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH-----------------------H----HHhcC
Confidence            4555555555433 2344443332  366555555555555543322                       2    36789


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                      ++|+||||||+.........+.++.+..++.|--+.+..          .++++....++- +-++++.|..
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~----------Tk~alp~m~~r~-~GhIVvisSi  151 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYL----------TKAALPSMKKRN-DGHIVVISSI  151 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHH----------HHHHHHHhhhcC-CCeEEEEecc
Confidence            999999999999976777888888888999998776644          344455555554 5666666554

>KOG1199|consensus

Probab=97.09  E-value=0.0028  Score=51.89  Aligned_cols=44  Identities=30%  Similarity=0.310  Sum_probs=40.6

Q ss_pred             CCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       159 ~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                      ..++.+.+.|++.+.+++++++....+|||+|.+|||||+....
T Consensus        54 g~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~   97 (260)
T KOG1199|consen   54 GGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAF   97 (260)
T ss_pred             CCceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeee
Confidence            57889999999999999999999999999999999999987553

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.09  E-value=0.0049  Score=55.79  Aligned_cols=35  Identities=31%  Similarity=0.395  Sum_probs=29.1

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcC--CeEEEEec
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCG--AKLVLSAR   78 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G--~~V~~~~r   78 (265)
                      ++.+.+.|+|+++.+|..++..++..+  ..+++.++
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di   42 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDI   42 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEec
Confidence            445578999999999999999998654  56999998

>KOG1201|consensus

Probab=97.02  E-value=0.016  Score=51.38  Aligned_cols=86  Identities=23%  Similarity=0.201  Sum_probs=62.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|.++++..-..--..+.++...+.| ++-+.++  -++-++..+..++                           ++++
T Consensus        61 rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cd--is~~eei~~~a~~---------------------------Vk~e  111 (300)
T KOG1201|consen   61 RGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCD--ISDREEIYRLAKK---------------------------VKKE  111 (300)
T ss_pred             hCCeEEEEeccccchHHHHHHHHhcCceeEEEec--CCCHHHHHHHHHH---------------------------HHHh
Confidence            45578888888888999999998877 3334443  3344444443222                           2578


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +|++||||||||+.......+.+.++.+-.++.|..
T Consensus       112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~  147 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTI  147 (300)
T ss_pred             cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhH
Confidence            899999999999999999998888887777766664

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.01  E-value=0.0048  Score=54.85  Aligned_cols=81  Identities=23%  Similarity=0.363  Sum_probs=57.1

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ..+++++|+|+++++|.++++.+...|++|+++++++++.+.+    ...+   ..   ...|..+.+....+.+...  
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~~---~~---~~~~~~~~~~~~~~~~~~~--  232 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KELG---AD---YVIDYRKEDFVREVRELTG--  232 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcC---CC---eEEecCChHHHHHHHHHhC--
Confidence            4678999999999999999999999999999998877655443    2222   11   2246666555555433222  


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                      .+++|++++++|.
T Consensus       233 ~~~~d~~i~~~g~  245 (342)
T cd08266         233 KRGVDVVVEHVGA  245 (342)
T ss_pred             CCCCcEEEECCcH
Confidence            1469999999984

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG4022|consensus

Probab=97.00  E-value=0.02  Score=46.56  Aligned_cols=35  Identities=14%  Similarity=0.068  Sum_probs=29.8

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      -+.++|-||.+.+|.+++..|-.+++-|.-++-++
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~e   37 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSE   37 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecc
Confidence            35688999999999999999999999888776543

>KOG0725|consensus

Probab=96.97  E-value=0.0047  Score=54.55  Aligned_cols=93  Identities=29%  Similarity=0.228  Sum_probs=68.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCe---EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAK---LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +-..|..+.|+|-+.--+...+..+...+..   +.....+....+...+.....                         
T Consensus        28 la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~-------------------------   82 (270)
T KOG0725|consen   28 LAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA-------------------------   82 (270)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH-------------------------
Confidence            4457899999999999999999988876654   555544444333333332211                         


Q ss_pred             HHHHHhCCccEEEeCCCCCccc-ccchhhhHHHHHhhhcccCC
Q psy9256         119 AVIQQFGCLDILINNAGRSQRA-AWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~-~~~~~~~~~~~~~~~~~~~~  160 (265)
                       +++.+|++|+||||||..... ...+.++++++..+..|.+.
T Consensus        83 -~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G  124 (270)
T KOG0725|consen   83 -VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRG  124 (270)
T ss_pred             -HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchh
Confidence             234479999999999997766 78999999999999988874

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.85  E-value=0.0016  Score=55.01  Aligned_cols=47  Identities=26%  Similarity=0.372  Sum_probs=39.9

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      ..+++||+++|+|.+ .+|..+|+.|.+.|++|++.+++++..++..+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            357899999999996 89999999999999999998888765555444

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.83  E-value=0.016  Score=43.82  Aligned_cols=94  Identities=17%  Similarity=0.141  Sum_probs=64.6

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCcc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  128 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld  128 (265)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+++.+.         ...++..|.++++.++++            
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~---------~~~~i~gd~~~~~~l~~a------------   58 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE---------GVEVIYGDATDPEVLERA------------   58 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT---------TSEEEES-TTSHHHHHHT------------
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc---------ccccccccchhhhHHhhc------------
Confidence            467777 5799999999999777999999988776655442         366889999999887766            


Q ss_pred             EEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEE
Q psy9256         129 ILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILI  193 (265)
Q Consensus       129 ilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilV  193 (265)
                                                   ...+...+.+...+++....+...+++.++...+++
T Consensus        59 -----------------------------~i~~a~~vv~~~~~d~~n~~~~~~~r~~~~~~~ii~   94 (116)
T PF02254_consen   59 -----------------------------GIEKADAVVILTDDDEENLLIALLARELNPDIRIIA   94 (116)
T ss_dssp             -----------------------------TGGCESEEEEESSSHHHHHHHHHHHHHHTTTSEEEE
T ss_pred             -----------------------------CccccCEEEEccCCHHHHHHHHHHHHHHCCCCeEEE
Confidence                                         112334455555566666666666666666555554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.82  E-value=0.009  Score=53.18  Aligned_cols=50  Identities=20%  Similarity=0.162  Sum_probs=42.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQ   92 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~   92 (265)
                      .+..+|.++|.|+ +|.|++++..|+..|+ +|++++|+.++.+++.+.+..
T Consensus       123 ~~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~  173 (284)
T PRK12549        123 PDASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA  173 (284)
T ss_pred             cCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh
Confidence            3567889999998 7899999999999998 699999998888877776644

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.81  E-value=0.043  Score=54.19  Aligned_cols=60  Identities=17%  Similarity=0.249  Sum_probs=48.5

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      +.++|.|. +.+|..+++.|.++|.++++++.++++.+++.+         .....+..|.++++..++.
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~---------~g~~v~~GDat~~~~L~~a  460 (621)
T PRK03562        401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK---------FGMKVFYGDATRMDLLESA  460 (621)
T ss_pred             CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh---------cCCeEEEEeCCCHHHHHhc
Confidence            56777777 779999999999999999999998887766644         1345789999999877655

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.76  E-value=0.028  Score=55.29  Aligned_cols=60  Identities=18%  Similarity=0.183  Sum_probs=48.2

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ..++|.|. +.+|..+++.|.++|.++++++++++..+++.+    .     ...++..|.++++..++.
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~-----g~~v~~GDat~~~~L~~a  460 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRK----Y-----GYKVYYGDATQLELLRAA  460 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----C-----CCeEEEeeCCCHHHHHhc
Confidence            46777776 789999999999999999999998877665543    1     355788999999887766

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.75  E-value=0.0061  Score=53.49  Aligned_cols=80  Identities=23%  Similarity=0.389  Sum_probs=54.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ++++++|+|+++++|.++++.+...|++|++++++++..+.+.    +.+.   .   ...|..+.+....+.+..  ..
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~---~---~~~~~~~~~~~~~~~~~~--~~  206 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR----ALGA---D---VAINYRTEDFAEEVKEAT--GG  206 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH----HcCC---C---EEEeCCchhHHHHHHHHh--CC
Confidence            5789999999999999999999999999999988765554432    2221   1   224444433333332211  11


Q ss_pred             CCccEEEeCCCC
Q psy9256         125 GCLDILINNAGR  136 (265)
Q Consensus       125 g~ldilinnAg~  136 (265)
                      +++|++++++|.
T Consensus       207 ~~~d~vi~~~g~  218 (323)
T cd05276         207 RGVDVILDMVGG  218 (323)
T ss_pred             CCeEEEEECCch
Confidence            469999999984

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=96.73  E-value=0.034  Score=48.05  Aligned_cols=118  Identities=17%  Similarity=0.153  Sum_probs=70.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +.-.|-.++.+|=..--=.+++.++.+.-+.+...+  -...+.+.+.+.                       .+    .
T Consensus        26 l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~D--VtD~~~~~~~i~-----------------------~~----~   76 (246)
T COG4221          26 LAEAGAKVVLAARREERLEALADEIGAGAALALALD--VTDRAAVEAAIE-----------------------AL----P   76 (246)
T ss_pred             HHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeec--cCCHHHHHHHHH-----------------------HH----H
Confidence            334566777766655555566666654112333333  223333333222                       22    3


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                      +++|++|+||||||.....++.+.+.++|+.-.+.|-.+-.+.          ++.++-...++-..  .+||-+++..
T Consensus        77 ~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~----------~~avLP~m~~r~~G--~IiN~~SiAG  143 (246)
T COG4221          77 EEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNG----------TRAVLPGMVERKSG--HIINLGSIAG  143 (246)
T ss_pred             HhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHH----------HHHhhhHHHhcCCc--eEEEeccccc
Confidence            6789999999999998889999999999999888877644422          33334444444222  6677666543

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.70  E-value=0.0029  Score=56.75  Aligned_cols=49  Identities=14%  Similarity=0.140  Sum_probs=38.8

Q ss_pred             hHHHHHHHHHHHHHhCCccEEEeCCCCCc--ccccchhhhHHHHHhhhccc
Q psy9256         110 TKYHRRCFDAVIQQFGCLDILINNAGRSQ--RAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ldilinnAg~~~--~~~~~~~~~~~~~~~~~~~~  158 (265)
                      .++++++++.+.+++|++|+||||||+..  ...+.+.+.++++..+..|.
T Consensus       103 ~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl  153 (299)
T PRK06300        103 GYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSS  153 (299)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHh
Confidence            35699999999999999999999999753  45667777777776655444

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.69  E-value=0.0022  Score=61.99  Aligned_cols=46  Identities=26%  Similarity=0.437  Sum_probs=39.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNL   89 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~   89 (265)
                      ++.+|+++|+|+ +|+|++++..|++.|++|++++|+.++.+++.+.
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~  421 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADA  421 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            578999999999 5999999999999999999999987766665443

>PRK06849 hypothetical protein; Provisional

Probab=96.69  E-value=0.015  Score=53.83  Aligned_cols=82  Identities=22%  Similarity=0.296  Sum_probs=53.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH-HHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY-HRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~  123 (265)
                      +.|++||||++.++|+.+++.|.+.|++|++++.++.......+..       .+...++..-.+++. ++.+. ++.++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-------d~~~~~p~p~~d~~~~~~~L~-~i~~~   74 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-------DGFYTIPSPRWDPDAYIQALL-SIVQR   74 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-------hheEEeCCCCCCHHHHHHHHH-HHHHH
Confidence            3589999999999999999999999999999988764433222211       122223222234433 44443 33333


Q ss_pred             hCCccEEEeCCC
Q psy9256         124 FGCLDILINNAG  135 (265)
Q Consensus       124 ~g~ldilinnAg  135 (265)
                      . ++|++|....
T Consensus        75 ~-~id~vIP~~e   85 (389)
T PRK06849         75 E-NIDLLIPTCE   85 (389)
T ss_pred             c-CCCEEEECCh
Confidence            3 4899998875

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=96.69  E-value=0.0047  Score=53.50  Aligned_cols=73  Identities=16%  Similarity=0.153  Sum_probs=58.0

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      .++||||++.+|..++++|.+.|..|....|+++......          ..+.....|+.+++++...       ..+.
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----------~~v~~~~~d~~~~~~l~~a-------~~G~   64 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----------GGVEVVLGDLRDPKSLVAG-------AKGV   64 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----------CCcEEEEeccCCHhHHHHH-------hccc
Confidence            5899999999999999999999999999999887765543          3577888999998876655       4556


Q ss_pred             cEEEeCCCCC
Q psy9256         128 DILINNAGRS  137 (265)
Q Consensus       128 dilinnAg~~  137 (265)
                      |-+++-.+..
T Consensus        65 ~~~~~i~~~~   74 (275)
T COG0702          65 DGVLLISGLL   74 (275)
T ss_pred             cEEEEEeccc
Confidence            6655555543

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.68  E-value=0.0057  Score=53.83  Aligned_cols=80  Identities=24%  Similarity=0.333  Sum_probs=55.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|++++|+|+++++|.++++.+...|++|+.+++++++.+.+.    ..+.   .   ..+|..+++....+.+..  ..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~---~---~~~~~~~~~~~~~~~~~~--~~  211 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR----QAGA---D---AVFNYRAEDLADRILAAT--AG  211 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCC---C---EEEeCCCcCHHHHHHHHc--CC
Confidence            5899999999999999999999999999999988776554432    2221   1   224555554444432221  11


Q ss_pred             CCccEEEeCCCC
Q psy9256         125 GCLDILINNAGR  136 (265)
Q Consensus       125 g~ldilinnAg~  136 (265)
                      +.+|++++++|.
T Consensus       212 ~~~d~vi~~~~~  223 (325)
T cd08253         212 QGVDVIIEVLAN  223 (325)
T ss_pred             CceEEEEECCch
Confidence            469999999874

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.65  E-value=0.0029  Score=56.06  Aligned_cols=78  Identities=24%  Similarity=0.404  Sum_probs=55.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++.+|.++|+|+ +|+|+++++.|+..| .+|++++|+.++.+++.+.+....    .   +..+. +          ..
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~----~---~~~~~-~----------~~  180 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG----K---AELDL-E----------LQ  180 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc----c---eeecc-c----------ch
Confidence            678899999997 899999999999999 689999999887777666543211    0   11111 0          01


Q ss_pred             HHhCCccEEEeCCCCCcc
Q psy9256         122 QQFGCLDILINNAGRSQR  139 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~  139 (265)
                      +.....|++||.....-.
T Consensus       181 ~~~~~~DivInaTp~g~~  198 (278)
T PRK00258        181 EELADFDLIINATSAGMS  198 (278)
T ss_pred             hccccCCEEEECCcCCCC
Confidence            223567999999887543

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.64  E-value=0.036  Score=50.10  Aligned_cols=82  Identities=17%  Similarity=0.159  Sum_probs=53.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +-.++.+.|+|+ +++|.++|..++..|.  .+++.+++++.++.....+.....-..+.... .  .+.+         
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~---------   69 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYS---------   69 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHH---------
Confidence            345678899998 9999999999998886  69999998887776666555432111122221 1  2222         


Q ss_pred             HHHhCCccEEEeCCCCCcc
Q psy9256         121 IQQFGCLDILINNAGRSQR  139 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~  139 (265)
                        .+.+-|++|..||..++
T Consensus        70 --~~~~adivIitag~~~k   86 (315)
T PRK00066         70 --DCKDADLVVITAGAPQK   86 (315)
T ss_pred             --HhCCCCEEEEecCCCCC
Confidence              23456788888877443

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.64  E-value=0.026  Score=50.73  Aligned_cols=77  Identities=26%  Similarity=0.248  Sum_probs=51.0

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHHHhCC-CCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          48 VVWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCVQAGA-HPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .+.|.|+ +++|.++|..++..|  ..+++.+|+++..+.....+..... .+......   ..+.+           ..
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~---~~~~~-----------~l   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK---AGDYS-----------DC   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE---cCCHH-----------Hh
Confidence            4667786 899999999999998  4799999998887776666544321 11111111   12222           23


Q ss_pred             CCccEEEeCCCCCcc
Q psy9256         125 GCLDILINNAGRSQR  139 (265)
Q Consensus       125 g~ldilinnAg~~~~  139 (265)
                      ..-|++|+.+|..++
T Consensus        67 ~~aDIVIitag~~~~   81 (306)
T cd05291          67 KDADIVVITAGAPQK   81 (306)
T ss_pred             CCCCEEEEccCCCCC
Confidence            567899999987544

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK06914 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.0046  Score=54.13  Aligned_cols=33  Identities=36%  Similarity=0.580  Sum_probs=23.0

Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHH
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDR  151 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~  151 (265)
                      .+.+.+|++|++|||||........+.+.+.+.
T Consensus        74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~  106 (280)
T PRK06914         74 LVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYR  106 (280)
T ss_pred             HHHHhcCCeeEEEECCcccccCccccCCHHHHH
Confidence            344567899999999998776655555544433

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.63  E-value=0.0027  Score=44.71  Aligned_cols=35  Identities=34%  Similarity=0.416  Sum_probs=23.6

Q ss_pred             ccCC-cEEEEcCCCCchhHH--HHHHHHHcCCeEEEEec
Q psy9256          43 YFNN-KVVWITGASSGIGEA--LALQLSKCGAKLVLSAR   78 (265)
Q Consensus        43 ~l~g-k~vlItGas~GIG~a--ia~~l~~~G~~V~~~~r   78 (265)
                      ++.| |.|||+|+|+|.|++  |+..| ..|++.+-++.
T Consensus        35 ~~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~f   72 (78)
T PF12242_consen   35 KINGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSF   72 (78)
T ss_dssp             --TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE-
T ss_pred             CCCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEee
Confidence            3455 899999999999999  66666 66788766654

>PLN00106 malate dehydrogenase

Probab=96.60  E-value=0.016  Score=52.46  Aligned_cols=43  Identities=23%  Similarity=0.212  Sum_probs=33.7

Q ss_pred             hhhccccCCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCC
Q psy9256          38 NKRLNYFNNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSS   80 (265)
Q Consensus        38 ~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~   80 (265)
                      |..+..-..+.+.|||+++.+|..++..++..+.  .+++.++++
T Consensus        10 ~~~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~   54 (323)
T PLN00106         10 CRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN   54 (323)
T ss_pred             cccccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence            3334444556899999999999999999997653  699999876

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.59  E-value=0.062  Score=52.30  Aligned_cols=60  Identities=15%  Similarity=0.271  Sum_probs=47.7

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ..++|.|+ +.+|+.++++|.++|.+|+++++++++.+++++         .....+..|.+|++..++.
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~---------~g~~~i~GD~~~~~~L~~a  477 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE---------RGIRAVLGNAANEEIMQLA  477 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---------CCCeEEEcCCCCHHHHHhc
Confidence            34666676 789999999999999999999998877665543         2366789999999877665

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.53  E-value=0.041  Score=50.21  Aligned_cols=39  Identities=33%  Similarity=0.436  Sum_probs=33.5

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCC
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSS   80 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~   80 (265)
                      ...+.++.++|.|+ +|+|..+|+.|++.|. ++.+++++.
T Consensus        19 Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         19 QRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             HHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            34677889999998 7899999999999997 788898864

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.53  E-value=0.02  Score=51.94  Aligned_cols=33  Identities=30%  Similarity=0.301  Sum_probs=27.4

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCC-------eEEEEecCCC
Q psy9256          49 VWITGASSGIGEALALQLSKCGA-------KLVLSARSSS   81 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~-------~V~~~~r~~~   81 (265)
                      +.|+|+++.+|..++..+...|.       .+++.++++.
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~   41 (324)
T TIGR01758         2 VVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPA   41 (324)
T ss_pred             EEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCc
Confidence            68999999999999999987553       4889988643

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=96.51  E-value=0.0092  Score=54.17  Aligned_cols=33  Identities=27%  Similarity=0.238  Sum_probs=28.6

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcC-------CeEEEEecCC
Q psy9256          48 VVWITGASSGIGEALALQLSKCG-------AKLVLSARSS   80 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G-------~~V~~~~r~~   80 (265)
                      .++|||+++.+|..++..|...+       ..|++.++++
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~   43 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP   43 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence            48999999999999999998744       5899999865

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.43  E-value=0.01  Score=52.72  Aligned_cols=80  Identities=19%  Similarity=0.249  Sum_probs=54.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++.+|.++|.|+ +|.|++++..|++.|+ +|.++.|+.++.+++.+.+....    ++  ..  +...++.       .
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~----~~--~~--~~~~~~~-------~  185 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG----VI--TR--LEGDSGG-------L  185 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC----cc--ee--ccchhhh-------h
Confidence            467899999987 9999999999999997 59999999887777666543211    11  11  1111111       1


Q ss_pred             HHhCCccEEEeCCCCCc
Q psy9256         122 QQFGCLDILINNAGRSQ  138 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~  138 (265)
                      ......|++||+.....
T Consensus       186 ~~~~~~DiVInaTp~g~  202 (282)
T TIGR01809       186 AIEKAAEVLVSTVPADV  202 (282)
T ss_pred             hcccCCCEEEECCCCCC
Confidence            22356899999988754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>KOG1429|consensus

Probab=96.42  E-value=0.013  Score=51.64  Aligned_cols=41  Identities=22%  Similarity=0.203  Sum_probs=35.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      ....++.++||||++=||.-++.+|..+|..|+..+.....
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg   63 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTG   63 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEeccccc
Confidence            34567899999999999999999999999999999875443

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.40  E-value=0.034  Score=44.17  Aligned_cols=43  Identities=30%  Similarity=0.333  Sum_probs=33.7

Q ss_pred             EEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHH
Q psy9256          49 VWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCV   91 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~   91 (265)
                      +.|.|+++.+|..+|..+...+  ..+++.+++++.++.....+.
T Consensus         3 V~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~   47 (141)
T PF00056_consen    3 VAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLS   47 (141)
T ss_dssp             EEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHH
T ss_pred             EEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhh
Confidence            6788999999999999999876  459999998765555444433

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.38  E-value=0.016  Score=51.58  Aligned_cols=82  Identities=24%  Similarity=0.329  Sum_probs=58.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .+.+|+.++|.|+ +|-+++++..|++.|+ +++++.|+.++.+++.+...+.+.   .+  ...+..+.+...      
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~---~~--~~~~~~~~~~~~------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA---AV--EAAALADLEGLE------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc---cc--cccccccccccc------
Confidence            4557899999998 8999999999999995 699999999998888887765441   11  111222221111      


Q ss_pred             HHHhCCccEEEeCCCCCccc
Q psy9256         121 IQQFGCLDILINNAGRSQRA  140 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~  140 (265)
                           .-|++||.-...-.+
T Consensus       190 -----~~dliINaTp~Gm~~  204 (283)
T COG0169         190 -----EADLLINATPVGMAG  204 (283)
T ss_pred             -----ccCEEEECCCCCCCC
Confidence                 469999998875444

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.36  E-value=0.041  Score=47.24  Aligned_cols=61  Identities=23%  Similarity=0.270  Sum_probs=48.6

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      .++|.|+ +-.|..+|+.|.++|++|++++++++..++....       ....+.+..|.++++.+.++
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~-------~~~~~~v~gd~t~~~~L~~a   62 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD-------ELDTHVVIGDATDEDVLEEA   62 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh-------hcceEEEEecCCCHHHHHhc
Confidence            4667676 7799999999999999999999988776653221       13577899999999887766

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.36  E-value=0.011  Score=52.63  Aligned_cols=75  Identities=27%  Similarity=0.426  Sum_probs=50.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .+.+++|+|+++++|.++++.+...|++|+.+.+++++.+.+    ...+.   . ..  .|.   ++   +.+.+. ..
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~~~---~-~~--~~~---~~---~~~~~~-~~  224 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KELGA---D-YV--IDG---SK---FSEDVK-KL  224 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHcCC---c-EE--Eec---HH---HHHHHH-hc
Confidence            578999999999999999999999999999988876554433    22221   1 11  121   11   222222 23


Q ss_pred             CCccEEEeCCCC
Q psy9256         125 GCLDILINNAGR  136 (265)
Q Consensus       125 g~ldilinnAg~  136 (265)
                      +..|++++++|.
T Consensus       225 ~~~d~v~~~~g~  236 (332)
T cd08259         225 GGADVVIELVGS  236 (332)
T ss_pred             cCCCEEEECCCh
Confidence            479999999984

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.30  E-value=0.013  Score=52.21  Aligned_cols=42  Identities=29%  Similarity=0.381  Sum_probs=36.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE   84 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~   84 (265)
                      .++.||+++|.|. +++|.++|+.|...|++|++.+|+++..+
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            4788999999999 66999999999999999999999875443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.29  E-value=0.011  Score=53.30  Aligned_cols=80  Identities=20%  Similarity=0.313  Sum_probs=51.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++|+|+++++|.+++......|++|+.+.+++++.+.+++.   .+.  ..    ..|..+.++....+.... . 
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~---lGa--~~----vi~~~~~~~~~~~i~~~~-~-  219 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNK---LGF--DD----AFNYKEEPDLDAALKRYF-P-  219 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCC--ce----eEEcCCcccHHHHHHHhC-C-
Confidence            589999999999999999887778899999988877665544431   231  11    123222222222222221 1 


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                      ++.|+++++.|
T Consensus       220 ~gvd~v~d~~g  230 (338)
T cd08295         220 NGIDIYFDNVG  230 (338)
T ss_pred             CCcEEEEECCC
Confidence            46899999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.26  E-value=0.026  Score=50.25  Aligned_cols=48  Identities=25%  Similarity=0.325  Sum_probs=40.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCV   91 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~   91 (265)
                      +..+|.++|.|+ +|-+++++..|++.|+ ++++.+|+.++.+++.+.+.
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~  172 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN  172 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            466899999998 8999999999999997 58899999888877766553

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.25  E-value=0.016  Score=49.60  Aligned_cols=79  Identities=24%  Similarity=0.359  Sum_probs=53.3

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .+|++++|+|+++ +|.++++.+...|.+|+.+++++++.+.+.    ..+.   .   ...|..+.+....+.   ...
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~---~---~~~~~~~~~~~~~~~---~~~  198 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK----ELGA---D---HVIDYKEEDLEEELR---LTG  198 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH----HhCC---c---eeccCCcCCHHHHHH---Hhc
Confidence            3688999999988 999999988889999999988765544332    2221   1   123444444333332   233


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                      .+..|++++++|.
T Consensus       199 ~~~~d~vi~~~~~  211 (271)
T cd05188         199 GGGADVVIDAVGG  211 (271)
T ss_pred             CCCCCEEEECCCC
Confidence            3679999999983

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.19  E-value=0.016  Score=51.84  Aligned_cols=79  Identities=18%  Similarity=0.257  Sum_probs=51.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|.+++|+|+++++|.+.+......|++|+.+.+++++.+.+.    +.+.   .   ...|-.+.+...+..+...  -
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~----~lGa---~---~vi~~~~~~~~~~~~~~~~--~  205 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK----KLGF---D---VAFNYKTVKSLEETLKKAS--P  205 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCC---C---EEEeccccccHHHHHHHhC--C
Confidence            5889999999999999988877788999998888766554442    3332   1   1123333222332222221  1


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                      ++.|+++++.|
T Consensus       206 ~gvdvv~d~~G  216 (325)
T TIGR02825       206 DGYDCYFDNVG  216 (325)
T ss_pred             CCeEEEEECCC
Confidence            36899999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.19  E-value=0.034  Score=44.42  Aligned_cols=87  Identities=32%  Similarity=0.397  Sum_probs=63.5

Q ss_pred             CcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ++++++++-+  ..--.++...+...|.++...--+....+...+.+++.                           .+.
T Consensus        25 ~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~---------------------------~~~   77 (167)
T PF00106_consen   25 ARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEV---------------------------IKR   77 (167)
T ss_dssp             TEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHH---------------------------HHH
T ss_pred             ceEEEEeeeccccccccccccccccccccccccccccccccccccccccc---------------------------ccc
Confidence            5678888887  44445566777778888777765555555554443322                           256


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      ++++|++|||||+.....+.+.+.++++..+..|..
T Consensus        78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  113 (167)
T PF00106_consen   78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLF  113 (167)
T ss_dssp             HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTH
T ss_pred             cccccccccccccccccccccccchhhhhccccccc
Confidence            799999999999998888889899999888877764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.17  E-value=0.17  Score=42.08  Aligned_cols=71  Identities=23%  Similarity=0.261  Sum_probs=56.6

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCcc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  128 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld  128 (265)
                      +-|.|||+-.|..|++...++|..|+.+.|+++++...           ..+..++.|+-|++++.       +...+.|
T Consensus         3 IaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----------~~~~i~q~Difd~~~~a-------~~l~g~D   64 (211)
T COG2910           3 IAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----------QGVTILQKDIFDLTSLA-------SDLAGHD   64 (211)
T ss_pred             EEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----------ccceeecccccChhhhH-------hhhcCCc
Confidence            55679999999999999999999999999998776432           24567889999987653       3467788


Q ss_pred             EEEeCCCCC
Q psy9256         129 ILINNAGRS  137 (265)
Q Consensus       129 ilinnAg~~  137 (265)
                      ++|..-|..
T Consensus        65 aVIsA~~~~   73 (211)
T COG2910          65 AVISAFGAG   73 (211)
T ss_pred             eEEEeccCC
Confidence            888877644

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.16  E-value=0.0079  Score=55.60  Aligned_cols=95  Identities=13%  Similarity=0.125  Sum_probs=66.1

Q ss_pred             CCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc-----------------c----c------------
Q psy9256         159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-----------------W----E------------  205 (265)
Q Consensus       159 ~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~-----------------~----~------------  205 (265)
                      +.++..+.||++++++++++++++.+++|++|+||||+|......                 +    .            
T Consensus       102 G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~  181 (398)
T PRK13656        102 GLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTV  181 (398)
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEE
Confidence            345678899999999999999999999999999999999873311                 1    1            


Q ss_pred             -ccchHHHHhhhhhhhhHH-----HHHHHHHHHHhhhhcCCceEEEEcccccccCCCCC
Q psy9256         206 -DIELEVDRELFELNVFSV-----LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS  258 (265)
Q Consensus       206 -~~~~~~~~~~~~~N~~~~-----~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~  258 (265)
                       ..+.++++.++  +++|.     +.=.+...|.|. .  ++++|.+|+..+....|.+
T Consensus       182 ~~~~~~ei~~Tv--~vMggedw~~Wi~al~~a~lla-~--g~~~va~TY~G~~~t~p~Y  235 (398)
T PRK13656        182 EPATEEEIADTV--KVMGGEDWELWIDALDEAGVLA-E--GAKTVAYSYIGPELTHPIY  235 (398)
T ss_pred             eeCCHHHHHHHH--HhhccchHHHHHHHHHhccccc-C--CcEEEEEecCCcceeeccc
Confidence             12233333332  34444     111344555553 2  5899999999988877775

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.12  E-value=0.01  Score=56.33  Aligned_cols=79  Identities=25%  Similarity=0.306  Sum_probs=55.2

Q ss_pred             cccCCcEEEEcCC----------------CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEee
Q psy9256          42 NYFNNKVVWITGA----------------SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL  105 (265)
Q Consensus        42 ~~l~gk~vlItGa----------------s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (265)
                      .+|.||.++||+|                ||-+|.++|+.+...|++|+++.-... +.           .+..+.++..
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~-----------~p~~v~~i~V  319 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA-----------DPQGVKVIHV  319 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC-----------CCCCceEEEe
Confidence            3589999999998                556999999999999999999863211 10           1223333332


Q ss_pred             cCCChHHHHHHHHHHHHHhCCccEEEeCCCCCc
Q psy9256         106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  138 (265)
Q Consensus       106 D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~  138 (265)
                           ++.....+.+++.+. .|++|.+|+++.
T Consensus       320 -----~ta~eM~~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        320 -----ESARQMLAAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             -----cCHHHHHHHHHhhCC-CCEEEEeccccc
Confidence                 334455556666665 699999999853

>PRK14968 putative methyltransferase; Provisional

Probab=96.12  E-value=0.14  Score=41.82  Aligned_cols=63  Identities=21%  Similarity=0.188  Sum_probs=43.2

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCC
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ  109 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (265)
                      .+++.++-.|++.|.   ++..+++.+.+|+.++++++..+.+.+.+...+....++.++.+|..+
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~   84 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFE   84 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccc
Confidence            357889999998886   566666668999999999887777766665443222225566666543

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.08  E-value=0.042  Score=49.04  Aligned_cols=46  Identities=20%  Similarity=0.220  Sum_probs=35.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKN   88 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~   88 (265)
                      .++.+|.++|.|+ +|-+++++..++..|+ +|.+..|+++..+++.+
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~  166 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALA  166 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHH
Confidence            3568899999998 6679999999999997 69999998653333333

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.08  E-value=0.084  Score=50.76  Aligned_cols=86  Identities=21%  Similarity=0.157  Sum_probs=57.2

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh------------
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT------------  110 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------  110 (265)
                      ...+.+|+|.|+ +.+|+..+......|+.|+..++++++++.+.+    .+     ..++..|..+.            
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes----lG-----A~~v~i~~~e~~~~~~gya~~~s  231 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES----MG-----AEFLELDFEEEGGSGDGYAKVMS  231 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC-----CeEEEeccccccccccchhhhcc
Confidence            356889999998 789999999998999999999998877765544    33     22232333221            


Q ss_pred             -HHHHHHHHHHHHHhCCccEEEeCCCCCc
Q psy9256         111 -KYHRRCFDAVIQQFGCLDILINNAGRSQ  138 (265)
Q Consensus       111 -~~~~~~~~~~~~~~g~ldilinnAg~~~  138 (265)
                       +..++..+...+..+..|++|++||+-.
T Consensus       232 ~~~~~~~~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        232 EEFIKAEMALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             hhHHHHHHHHHHhccCCCCEEEECCCCCc
Confidence             1122222222333467999999999844

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.04  E-value=0.027  Score=51.13  Aligned_cols=76  Identities=26%  Similarity=0.428  Sum_probs=50.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |+++||+||++|+|..........|++++.+..+.++.+    .+.+.++  .    ...|..+.+    +.+.+++.++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~----~~~~lGA--d----~vi~y~~~~----~~~~v~~~t~  208 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE----LLKELGA--D----HVINYREED----FVEQVRELTG  208 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH----HHHhcCC--C----EEEcCCccc----HHHHHHHHcC
Confidence            999999999999999988877788977666655544433    3333442  1    122333333    5555666663


Q ss_pred             --CccEEEeCCC
Q psy9256         126 --CLDILINNAG  135 (265)
Q Consensus       126 --~ldilinnAg  135 (265)
                        +.|+++..-|
T Consensus       209 g~gvDvv~D~vG  220 (326)
T COG0604         209 GKGVDVVLDTVG  220 (326)
T ss_pred             CCCceEEEECCC
Confidence              5899888888

>KOG1203|consensus

Probab=96.02  E-value=0.066  Score=49.87  Aligned_cols=46  Identities=20%  Similarity=0.229  Sum_probs=39.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      ..+-.+++|+||+++.|.-+++.|.++|+.|.++-|+.+..+....
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            3456799999999999999999999999999999998776655433

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.01  E-value=0.04  Score=50.08  Aligned_cols=73  Identities=26%  Similarity=0.383  Sum_probs=52.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|++++|+|.+ |+|..-++.....|++|+..+|++++++.+++.    ++   .   +..|.++++..+.+.    +  
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GA---d---~~i~~~~~~~~~~~~----~--  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GA---D---HVINSSDSDALEAVK----E--  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CC---c---EEEEcCCchhhHHhH----h--
Confidence            59999999998 999987776666899999999999888766553    21   1   223433555544442    2  


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                       ..|++|++++
T Consensus       229 -~~d~ii~tv~  238 (339)
T COG1064         229 -IADAIIDTVG  238 (339)
T ss_pred             -hCcEEEECCC
Confidence             2899999998

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.99  E-value=0.019  Score=50.59  Aligned_cols=77  Identities=18%  Similarity=0.325  Sum_probs=51.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|++++|+|+++++|.++++.+...|++|+.+.++++..+.+    .+.+   ..   ...+..+.+....+    ....
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g---~~---~~~~~~~~~~~~~~----~~~~  204 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC----EALG---AD---IAINYREEDFVEVV----KAET  204 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcC---Cc---EEEecCchhHHHHH----HHHc
Confidence            578999999999999999999999999999988876554422    2222   11   11233333333333    2222


Q ss_pred             --CCccEEEeCCC
Q psy9256         125 --GCLDILINNAG  135 (265)
Q Consensus       125 --g~ldilinnAg  135 (265)
                        +++|++|+++|
T Consensus       205 ~~~~~d~~i~~~~  217 (325)
T TIGR02824       205 GGKGVDVILDIVG  217 (325)
T ss_pred             CCCCeEEEEECCc
Confidence              35999999988

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.96  E-value=0.071  Score=49.29  Aligned_cols=77  Identities=16%  Similarity=0.104  Sum_probs=52.8

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +.++.++|.|+ +++|+..++.+...|++|++++|++++++.+...   .+   ..   +..+..+++.+       .+.
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~---~g---~~---v~~~~~~~~~l-------~~~  227 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAE---FG---GR---IHTRYSNAYEI-------EDA  227 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHh---cC---ce---eEeccCCHHHH-------HHH
Confidence            56677888888 6899999999999999999999987665544332   11   11   22334444333       233


Q ss_pred             hCCccEEEeCCCCC
Q psy9256         124 FGCLDILINNAGRS  137 (265)
Q Consensus       124 ~g~ldilinnAg~~  137 (265)
                      ...-|++||++++.
T Consensus       228 l~~aDvVI~a~~~~  241 (370)
T TIGR00518       228 VKRADLLIGAVLIP  241 (370)
T ss_pred             HccCCEEEEccccC
Confidence            45689999998763

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.96  E-value=0.12  Score=46.96  Aligned_cols=40  Identities=23%  Similarity=0.311  Sum_probs=35.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      .++.||++.|.|. |.||..+|+++...|++|+..+|+...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            4789999999999 899999999999999999988887543

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.058  Score=47.66  Aligned_cols=73  Identities=21%  Similarity=0.318  Sum_probs=45.7

Q ss_pred             hHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCc
Q psy9256          59 GEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  138 (265)
Q Consensus        59 G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~  138 (265)
                      ...++..+...|.++....-+....+.+.+.+.                       .+    .+.+|++|++|||||+..
T Consensus        52 ~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~-----------------------~~----~~~~g~id~lv~nAG~~~  104 (286)
T PRK07791         52 AQAVVDEIVAAGGEAVANGDDIADWDGAANLVD-----------------------AA----VETFGGLDVLVNNAGILR  104 (286)
T ss_pred             HHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH-----------------------HH----HHhcCCCCEEEECCCCCC
Confidence            345566666667666555444444444443322                       22    245799999999999977


Q ss_pred             ccccchhhhHHHHHhhhccc
Q psy9256         139 RAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~  158 (265)
                      ...+.+.+.+.++..+..|.
T Consensus       105 ~~~~~~~~~~~~~~~~~~N~  124 (286)
T PRK07791        105 DRMIANMSEEEWDAVIAVHL  124 (286)
T ss_pred             CCCcccCCHHHHHHHHHHcc
Confidence            66667777777766665543

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.95  E-value=0.02  Score=52.12  Aligned_cols=79  Identities=23%  Similarity=0.339  Sum_probs=50.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|.+++|+|+++++|...+......|++|+.+++++++.+.+.+   +.+.   .   ...|-.+.++....   +.+..
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~---~lGa---~---~vi~~~~~~~~~~~---i~~~~  225 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGF---D---EAFNYKEEPDLDAA---LKRYF  225 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH---hcCC---C---EEEECCCcccHHHH---HHHHC
Confidence            58999999999999999888777889999888877665544332   2331   1   11232222122222   22222


Q ss_pred             -CCccEEEeCCC
Q psy9256         125 -GCLDILINNAG  135 (265)
Q Consensus       125 -g~ldilinnAg  135 (265)
                       ++.|+++.+.|
T Consensus       226 ~~gvD~v~d~vG  237 (348)
T PLN03154        226 PEGIDIYFDNVG  237 (348)
T ss_pred             CCCcEEEEECCC
Confidence             36899999988

>PRK13886 conjugal transfer protein TraL; Provisional

Probab=95.83  E-value=0.41  Score=41.55  Aligned_cols=144  Identities=12%  Similarity=0.079  Sum_probs=81.5

Q ss_pred             CcEEEEcCCCCchhHHH-----HHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEAL-----ALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        46 gk~vlItGas~GIG~ai-----a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++.+|.++-+|.|+..     |..+++.|.+|.+++-++....  .........  .+.....-|-.+......+++..
T Consensus         2 ~~i~~i~~~KGGvGKSt~a~~la~~l~~~g~~vl~iD~D~~n~~--~~~~~~l~~--~~~~i~~~~~i~~r~fD~Lve~i   77 (241)
T PRK13886          2 AKIHMVLQGKGGVGKSFIAATIAQYKASKGQKPLCIDTDPVNAT--FEGYKALNV--RRLNIMDGDEINTRNFDALVEMI   77 (241)
T ss_pred             CeEEEEecCCCCCcHHHHHHHHHHHHHhCCCCEEEEECCCCCch--hhhHHhcCC--cceecccCCccchhhHHHHHHHH
Confidence            46889999999999986     5566678999999988766532  112222221  22222222333344556665555


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeee-eccc-cChhHHHHHHHHHHhhcc-cccEEE-ecc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL-TLDV-TQTKYHRRCFDAVIQQFG-CLDILI-NNA  196 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~dv-~~~~~v~~~~~~i~~~~g-~ldilV-nnA  196 (265)
                      .+  .+.|++|+|.. ++...+..+-.+..-..+....+.+++.+ ..+- .+..+.-..+.++.+.++ .++++| -|-
T Consensus        78 ~~--~~~dvIIDngA-s~~~~l~~yl~~n~l~~ll~e~g~~lvvh~vi~gg~~~~dtl~~~~~l~~~~~~~~~~Vvw~N~  154 (241)
T PRK13886         78 AS--TEGDVIIDNGA-SSFVPLSHYLISNQVPALLQDMGHELVVHTVVTGGQALLDTVSGFAQLASQFPAECLFVVWLNP  154 (241)
T ss_pred             hc--cCCCEEEECCC-cchHHHHHHHHhCcHHHHHHHCCceEEEEEEECCCcccHHHHHHHHHHHHHcCCCceEEEEecC
Confidence            53  35678898886 44444444432322223333344444444 2222 234566666777888875 577776 564

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.82  E-value=0.071  Score=45.86  Aligned_cols=88  Identities=23%  Similarity=0.206  Sum_probs=54.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...++.++...|.++....-+....+...+.+.                       .+    .+.+|
T Consensus        33 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~-----------------------~~----~~~~g   85 (253)
T PRK05867         33 GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLD-----------------------QV----TAELG   85 (253)
T ss_pred             CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH-----------------------HH----HHHhC
Confidence            5567777665554556666666666565444334333333333222                       22    34568


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      ++|++|||||+.....+.+.+.+.++..+..|...
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  120 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTG  120 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchh
Confidence            99999999999877666777777777666665543

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.79  E-value=0.037  Score=49.79  Aligned_cols=79  Identities=15%  Similarity=0.225  Sum_probs=50.1

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |++++|+|+++|+|.+.+......|+ +|+.+++++++.+.+.++   .+.  ..    ..|..+.+ ..+.+.+.. . 
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~---lGa--~~----vi~~~~~~-~~~~i~~~~-~-  222 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSE---LGF--DA----AINYKTDN-VAERLRELC-P-  222 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh---cCC--cE----EEECCCCC-HHHHHHHHC-C-
Confidence            48999999999999998877777898 799888876655444332   332  11    12333322 222222221 1 


Q ss_pred             CCccEEEeCCCC
Q psy9256         125 GCLDILINNAGR  136 (265)
Q Consensus       125 g~ldilinnAg~  136 (265)
                      ++.|++++++|.
T Consensus       223 ~gvd~vid~~g~  234 (345)
T cd08293         223 EGVDVYFDNVGG  234 (345)
T ss_pred             CCceEEEECCCc
Confidence            469999998883

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.75  E-value=0.02  Score=54.72  Aligned_cols=46  Identities=33%  Similarity=0.486  Sum_probs=38.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      .++.+|.++|+|+ +|+|+++++.|++.|++|++.+|+.++.+++.+
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~  373 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS  373 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            3578899999997 699999999999999999999998766655443

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.72  E-value=0.073  Score=46.73  Aligned_cols=86  Identities=14%  Similarity=0.083  Sum_probs=51.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-...-...++..+...|.++....-+-...+.+.+...+                       .    .+.+|
T Consensus        30 G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~~g   82 (275)
T PRK05876         30 GARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADE-----------------------A----FRLLG   82 (275)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH-----------------------H----HHHcC
Confidence            45566665544333445556666676665554444444444433222                       1    24578


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      ++|++|||||+...+.+.+.+.+.++..++.|.
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~  115 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDL  115 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhh
Confidence            999999999998777777777766655544443

>KOG2865|consensus

Probab=95.71  E-value=0.069  Score=47.35  Aligned_cols=71  Identities=17%  Similarity=0.236  Sum_probs=50.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ..++|-++-|.||++=+|+-++.+|++.|..|++-.|-.+.-..   .++-.+ .-+++.+.+.|+.|++|+++.
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r---~lkvmG-dLGQvl~~~fd~~DedSIr~v  127 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPR---HLKVMG-DLGQVLFMKFDLRDEDSIRAV  127 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchh---heeecc-cccceeeeccCCCCHHHHHHH
Confidence            35778899999999999999999999999999998874432211   111111 124667777777777777666

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=95.70  E-value=0.054  Score=47.65  Aligned_cols=88  Identities=20%  Similarity=0.254  Sum_probs=60.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +|..+++++=+.--=.++++++..+ |..|.+...+-.+.+.+.+...+.                           ++.
T Consensus        29 ~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l---------------------------~~~   81 (265)
T COG0300          29 RGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDEL---------------------------KER   81 (265)
T ss_pred             CCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHH---------------------------Hhc
Confidence            5778888888877777788888765 455555554444444443332222                           234


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      .+++|+||||||+...+.+.+.+.++....+..|..
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~  117 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNIL  117 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHH
Confidence            468999999999999998888887777766665553

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.70  E-value=0.035  Score=52.06  Aligned_cols=76  Identities=18%  Similarity=0.228  Sum_probs=54.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++.||.++|.|+ ||+|.++++.|+..|+ +++++.|+.++.+++.+..   +.    ...+     ..       +..
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~---~~----~~~~-----~~-------~~l  236 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF---RN----ASAH-----YL-------SEL  236 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh---cC----CeEe-----cH-------HHH
Confidence            4688999999999 9999999999999996 6899999877665555432   10    1111     11       122


Q ss_pred             HHHhCCccEEEeCCCCC
Q psy9256         121 IQQFGCLDILINNAGRS  137 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~  137 (265)
                      .+....-|++||+.+..
T Consensus       237 ~~~l~~aDiVI~aT~a~  253 (414)
T PRK13940        237 PQLIKKADIIIAAVNVL  253 (414)
T ss_pred             HHHhccCCEEEECcCCC
Confidence            34456789999999863

>PLN03139 formate dehydrogenase; Provisional

Probab=95.66  E-value=0.24  Score=46.00  Aligned_cols=39  Identities=26%  Similarity=0.285  Sum_probs=34.5

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      ..++.||++.|.|. +.||+.+|+++...|++|+..+|+.
T Consensus       194 ~~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        194 AYDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             CcCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            35799999999997 6799999999999999998888764

>cd00704 MDH Malate dehydrogenase

Probab=95.64  E-value=0.11  Score=47.25  Aligned_cols=33  Identities=30%  Similarity=0.278  Sum_probs=27.7

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCC-------eEEEEecCC
Q psy9256          48 VVWITGASSGIGEALALQLSKCGA-------KLVLSARSS   80 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~-------~V~~~~r~~   80 (265)
                      .+.||||++.+|..++..++..|.       .+++.++++
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~   41 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP   41 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence            378999999999999999987652       488988876

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.61  E-value=0.19  Score=40.89  Aligned_cols=42  Identities=29%  Similarity=0.388  Sum_probs=32.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL   83 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~   83 (265)
                      .++.||.++|.|.|.-+|+.++..|.++|++|.++..+.+.+
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l   73 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNL   73 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcc
Confidence            468999999999999999999999999999999876654444

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.60  E-value=0.017  Score=54.43  Aligned_cols=37  Identities=22%  Similarity=0.308  Sum_probs=30.2

Q ss_pred             CCcEEE----EcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          45 NNKVVW----ITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        45 ~gk~vl----ItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      .|..++    |+||++|+|.++++.+...|+.|+.+.+.+.
T Consensus        33 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~   73 (450)
T PRK08261         33 PGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGL   73 (450)
T ss_pred             CCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccc
Confidence            345555    8888999999999999999999998765543

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.54  E-value=0.046  Score=49.53  Aligned_cols=77  Identities=19%  Similarity=0.336  Sum_probs=50.8

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ..|++++|+|+ +++|...+..+...|+ +|+++++++++++.++    +.++   .   ...|..+.+ ..+    ..+
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~----~lGa---~---~vi~~~~~~-~~~----~~~  231 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR----EMGA---D---KLVNPQNDD-LDH----YKA  231 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH----HcCC---c---EEecCCccc-HHH----Hhc
Confidence            36899999986 8999999887777898 5888888877665443    3332   1   123433322 222    223


Q ss_pred             HhCCccEEEeCCCC
Q psy9256         123 QFGCLDILINNAGR  136 (265)
Q Consensus       123 ~~g~ldilinnAg~  136 (265)
                      ..|.+|+++.++|.
T Consensus       232 ~~g~~D~vid~~G~  245 (343)
T PRK09880        232 EKGYFDVSFEVSGH  245 (343)
T ss_pred             cCCCCCEEEECCCC
Confidence            34679999999983

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.53  E-value=0.052  Score=48.35  Aligned_cols=77  Identities=17%  Similarity=0.263  Sum_probs=51.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|.+++|+||++++|.+.+......|++|+.+.+++++.+.+++    .+.   .   ...|-.+++..+.+    ++..
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~----~Ga---~---~vi~~~~~~~~~~v----~~~~  208 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE----LGF---D---AVFNYKTVSLEEAL----KEAA  208 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC---C---EEEeCCCccHHHHH----HHHC
Confidence            58999999999999999888888889999988887765544432    331   1   11233333322222    2222


Q ss_pred             -CCccEEEeCCC
Q psy9256         125 -GCLDILINNAG  135 (265)
Q Consensus       125 -g~ldilinnAg  135 (265)
                       ++.|+++++.|
T Consensus       209 ~~gvd~vld~~g  220 (329)
T cd08294         209 PDGIDCYFDNVG  220 (329)
T ss_pred             CCCcEEEEECCC
Confidence             46899999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.51  E-value=0.058  Score=47.98  Aligned_cols=37  Identities=19%  Similarity=0.280  Sum_probs=33.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR   78 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r   78 (265)
                      .++.||.++|.|+|+=.|++++..|.+.|++|.++.|
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            4789999999999777999999999999999988876

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.47  E-value=0.088  Score=46.80  Aligned_cols=38  Identities=21%  Similarity=0.280  Sum_probs=34.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      ++.||.++|.|.|.=.|+.++..|.++|++|.++.++.
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T  193 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT  193 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC
Confidence            68899999999999999999999999999998886543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.45  E-value=0.071  Score=48.02  Aligned_cols=47  Identities=26%  Similarity=0.390  Sum_probs=37.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNL   89 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~   89 (265)
                      .++.+++++|.|+ |.+|..+++.+...| .+|++++|++++.+++.+.
T Consensus       174 ~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~  221 (311)
T cd05213         174 GNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE  221 (311)
T ss_pred             CCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence            3478999999988 999999999998866 5688899987766555443

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK12747 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.43  Score=40.83  Aligned_cols=46  Identities=24%  Similarity=0.249  Sum_probs=32.1

Q ss_pred             HHHHHHHHHhC--CccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         115 RCFDAVIQQFG--CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       115 ~~~~~~~~~~g--~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      .+.+...+.+|  ++|++|||||+.....+.+.+.+.++..+..|...
T Consensus        75 ~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~  122 (252)
T PRK12747         75 SLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKA  122 (252)
T ss_pred             HHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhH
Confidence            33444555555  89999999998766666677777777776666543

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.43  E-value=0.26  Score=44.44  Aligned_cols=40  Identities=25%  Similarity=0.187  Sum_probs=34.9

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      ...+.||++.|.|- +.||+++|+++...|++|+..+|+.+
T Consensus       131 ~~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        131 EYHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             CCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            34689999999987 78999999999999999999887654

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.43  E-value=0.044  Score=44.95  Aligned_cols=39  Identities=23%  Similarity=0.250  Sum_probs=34.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      .++.||.++|.|++.=.|..+++.|.+.|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            579999999999955579999999999999999998864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.40  E-value=0.058  Score=48.27  Aligned_cols=41  Identities=29%  Similarity=0.363  Sum_probs=35.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL   83 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~   83 (265)
                      ..+.|+.++|.|. +++|+.+++.+...|++|.+.+|+++..
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            4568999999998 5799999999999999999999986543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.38  E-value=0.13  Score=44.43  Aligned_cols=85  Identities=18%  Similarity=0.224  Sum_probs=50.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-..  .......+...|.++....-+....+...+.+.+                       +    .+.+
T Consensus        31 ~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----------------------~----~~~~   81 (251)
T PRK12481         31 AGADIVGVGVAE--APETQAQVEALGRKFHFITADLIQQKDIDSIVSQ-----------------------A----VEVM   81 (251)
T ss_pred             CCCEEEEecCch--HHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHH-----------------------H----HHHc
Confidence            355566665432  2334445555566665544444444444433322                       1    3457


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      |++|++|||||+.....+.+.+.++++..+..|.
T Consensus        82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~  115 (251)
T PRK12481         82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQ  115 (251)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCc
Confidence            8999999999997766666777777776665554

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.37  E-value=0.054  Score=47.69  Aligned_cols=42  Identities=29%  Similarity=0.362  Sum_probs=36.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV   86 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~   86 (265)
                      ++++++|+|+++++|.+++..+...|++|+++++++++.+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999999999999998876555443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.35  E-value=0.12  Score=43.54  Aligned_cols=44  Identities=32%  Similarity=0.528  Sum_probs=36.5

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecC---CCcHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARS---SSNLE   84 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~---~~~~~   84 (265)
                      -+..+..+.++|.|+ +|+|..+|..|++.|. ++++++++   ++.++
T Consensus        15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~   62 (200)
T TIGR02354        15 IVQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLN   62 (200)
T ss_pred             HHHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccc
Confidence            345677888999998 7899999999999998 69999988   44443

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.33  E-value=0.29  Score=41.25  Aligned_cols=38  Identities=32%  Similarity=0.477  Sum_probs=32.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSS   80 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~   80 (265)
                      ..+.++.++|.|+ +|+|..+++.|++.|. ++.+++++.
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~   55 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDH   55 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCE
Confidence            4577888999886 7999999999999997 799998763

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK07574 formate dehydrogenase; Provisional

Probab=95.31  E-value=0.26  Score=45.84  Aligned_cols=39  Identities=28%  Similarity=0.267  Sum_probs=34.9

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      ..++.||++.|.|. +.||+++|+++...|++|+..+|+.
T Consensus       187 ~~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~  225 (385)
T PRK07574        187 SYDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR  225 (385)
T ss_pred             ceecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence            35789999999998 6699999999999999999998875

>PRK04148 hypothetical protein; Provisional

Probab=95.28  E-value=0.06  Score=42.43  Aligned_cols=56  Identities=18%  Similarity=0.245  Sum_probs=44.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTK  111 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~  111 (265)
                      +++.+++.|.+  -|.++|..|++.|++|+.++.++...+.+++.         .+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~---------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL---------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh---------CCeEEECcCCCCC
Confidence            45778999987  77888999999999999999998866655442         3567889998875

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.26  E-value=0.077  Score=47.23  Aligned_cols=79  Identities=16%  Similarity=0.234  Sum_probs=51.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|.+++|.|+++++|.+++......|++|+.+.++.++.+.+.+.   .+.  .    ...|..+.+....+.+. . . 
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~---~g~--~----~~~~~~~~~~~~~v~~~-~-~-  212 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEE---LGF--D----AAINYKTPDLAEALKEA-A-P-  212 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh---cCC--c----eEEecCChhHHHHHHHh-c-c-
Confidence            578999999999999999999989999999988776554433321   221  1    11233333332322211 1 1 


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                      +.+|++++++|
T Consensus       213 ~~~d~vi~~~g  223 (329)
T cd05288         213 DGIDVYFDNVG  223 (329)
T ss_pred             CCceEEEEcch
Confidence            57999999987

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK05086 malate dehydrogenase; Provisional

Probab=95.26  E-value=0.041  Score=49.67  Aligned_cols=34  Identities=41%  Similarity=0.560  Sum_probs=26.5

Q ss_pred             EEEEcCCCCchhHHHHHHHHH---cCCeEEEEecCCC
Q psy9256          48 VVWITGASSGIGEALALQLSK---CGAKLVLSARSSS   81 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~---~G~~V~~~~r~~~   81 (265)
                      .++|.||++++|.+++..+..   .+..+++.+|++.
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            478889999999999998854   2346788887643

>PRK06139 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.11  Score=47.22  Aligned_cols=86  Identities=16%  Similarity=0.274  Sum_probs=52.6

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++=+..--..++..+.+.|.++.....+....+.+.+...                       .+    .+.+|
T Consensus        31 G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----------------------~~----~~~~g   83 (330)
T PRK06139         31 GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALAT-----------------------QA----ASFGG   83 (330)
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH-----------------------HH----HHhcC
Confidence            4556666544333344556666667776554444444444333222                       11    34568


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      ++|++|||||+...+.+.+.+.++++..+..|.
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~  116 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNL  116 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhh
Confidence            999999999998887778777777766666554

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.21  E-value=0.3  Score=44.59  Aligned_cols=38  Identities=32%  Similarity=0.431  Sum_probs=33.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSS   80 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~   80 (265)
                      ..+..+.|+|.|+ +|+|..+++.|++.|. ++.+++++.
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            4577788999999 8999999999999998 799999864

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.20  E-value=0.083  Score=49.33  Aligned_cols=107  Identities=18%  Similarity=0.304  Sum_probs=66.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++++++++|.|+ |-+|.-.|++|+++| ..|+++.|+.++.+++...+.             .++..       ++..
T Consensus       174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-------------~~~~~-------l~el  232 (414)
T COG0373         174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-------------AEAVA-------LEEL  232 (414)
T ss_pred             cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-------------Ceeec-------HHHH
Confidence            3489999999998 679999999999999 568888998877777666542             11122       2233


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHH
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRR  177 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~  177 (265)
                      .+....-|++|-..|...+-    .+.+..........+    .+.+|++.|.++..
T Consensus       233 ~~~l~~~DvVissTsa~~~i----i~~~~ve~a~~~r~~----~livDiavPRdie~  281 (414)
T COG0373         233 LEALAEADVVISSTSAPHPI----ITREMVERALKIRKR----LLIVDIAVPRDVEP  281 (414)
T ss_pred             HHhhhhCCEEEEecCCCccc----cCHHHHHHHHhcccC----eEEEEecCCCCCCc
Confidence            44456778888776643221    111122222212222    56677777766544

>PRK06720 hypothetical protein; Provisional

Probab=95.17  E-value=0.13  Score=42.01  Aligned_cols=71  Identities=15%  Similarity=0.211  Sum_probs=40.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-....+..+...|..+.....+....+...+...                       ..    .+.+|
T Consensus        40 G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~-----------------------~~----~~~~G   92 (169)
T PRK06720         40 GAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVIS-----------------------IT----LNAFS   92 (169)
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH-----------------------HH----HHHcC
Confidence            5567777755443444556665556554433334333333333221                       22    24579


Q ss_pred             CccEEEeCCCCCcccccc
Q psy9256         126 CLDILINNAGRSQRAAWE  143 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~  143 (265)
                      ++|++|||||+.......
T Consensus        93 ~iDilVnnAG~~~~~~~~  110 (169)
T PRK06720         93 RIDMLFQNAGLYKIDSIF  110 (169)
T ss_pred             CCCEEEECCCcCCCCCcc
Confidence            999999999997654433

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.08  E-value=0.35  Score=40.82  Aligned_cols=38  Identities=29%  Similarity=0.330  Sum_probs=33.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      -++.||.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            3689999999998 8899999999999999999997643

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.06  E-value=0.42  Score=45.22  Aligned_cols=38  Identities=21%  Similarity=0.388  Sum_probs=33.1

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER   85 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~   85 (265)
                      ++.|.||.+++|.++++.|.+.|.+|++.+|+++..++
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~   39 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE   39 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence            47888999999999999999999999999998766433

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.03  E-value=0.24  Score=46.63  Aligned_cols=60  Identities=20%  Similarity=0.254  Sum_probs=46.1

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      .++|.|+ +.+|..+++.|.+.|..|++++++++..+++.+.        ....++..|.++.+.+...
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~--------~~~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR--------LDVRTVVGNGSSPDVLREA   61 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh--------cCEEEEEeCCCCHHHHHHc
Confidence            4778887 8999999999999999999999987766554331        2356778899887665544

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=94.99  E-value=0.36  Score=46.41  Aligned_cols=84  Identities=21%  Similarity=0.149  Sum_probs=58.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCC-------------C
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT-------------Q  109 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------~  109 (265)
                      ...+..++|.|+ +.+|...+..+...|+.|++.+++.++++.+..    .+     ..++..|..             +
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~----lG-----a~~v~v~~~e~g~~~~gYa~~~s  230 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS----MG-----AEFLELDFKEEGGSGDGYAKVMS  230 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC-----CeEEeccccccccccccceeecC
Confidence            445678999997 899999999999999999999988776544433    22     222333321             2


Q ss_pred             hHHHHHHHHHHHHHhCCccEEEeCCCC
Q psy9256         110 TKYHRRCFDAVIQQFGCLDILINNAGR  136 (265)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ldilinnAg~  136 (265)
                      .+..+...+...+....-|++|++|=+
T Consensus       231 ~~~~~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       231 EEFIAAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECccc
Confidence            344555555566667889999999943

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.97  E-value=0.16  Score=44.12  Aligned_cols=38  Identities=18%  Similarity=0.208  Sum_probs=27.8

Q ss_pred             HHhCCccEEEeCCCCCcc----cccchhhhHHHHHhhhcccC
Q psy9256         122 QQFGCLDILINNAGRSQR----AAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~----~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +.+|++|++|||||+...    ..+.+.+.++++..+..|..
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~  124 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAY  124 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeH
Confidence            557899999999998643    45566677777777666643

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.96  E-value=0.52  Score=38.10  Aligned_cols=35  Identities=31%  Similarity=0.303  Sum_probs=31.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEe
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSA   77 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~   77 (265)
                      -+++||.++|.|| |.+|...++.|.+.|++|.+++
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            3789999999998 7899999999999999999885

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.95  E-value=0.075  Score=42.25  Aligned_cols=43  Identities=23%  Similarity=0.300  Sum_probs=37.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE   84 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~   84 (265)
                      .++.||.++|.|.+.-.|+.++..|.++|++|..+.++...++
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~   66 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ   66 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence            4789999999999999999999999999999999876554443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=94.94  E-value=0.18  Score=46.22  Aligned_cols=78  Identities=18%  Similarity=0.264  Sum_probs=50.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCC-hHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ-TKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~  122 (265)
                      .|.+++|+|+ +++|...+......|+ +|+.+++++++++.+.+    .+.   .   ...|..+ .++...   .+.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~----~Ga---~---~~i~~~~~~~~~~~---~v~~  250 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKK----LGA---T---DCVNPNDYDKPIQE---VIVE  250 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC---C---eEEcccccchhHHH---HHHH
Confidence            5889999986 8999998887777898 69888887776654432    332   1   1223332 122222   2222


Q ss_pred             Hh-CCccEEEeCCCC
Q psy9256         123 QF-GCLDILINNAGR  136 (265)
Q Consensus       123 ~~-g~ldilinnAg~  136 (265)
                      .. +..|++|+++|.
T Consensus       251 ~~~~g~d~vid~~G~  265 (368)
T TIGR02818       251 ITDGGVDYSFECIGN  265 (368)
T ss_pred             HhCCCCCEEEECCCC
Confidence            22 479999999983

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.94  E-value=0.4  Score=37.03  Aligned_cols=76  Identities=25%  Similarity=0.339  Sum_probs=52.5

Q ss_pred             EEEEcCCCCchhHHHHHHHHH-cCCeEEEE-ecCC----------------------CcHHHHHHHHHHhCCCCCcEEEE
Q psy9256          48 VVWITGASSGIGEALALQLSK-CGAKLVLS-ARSS----------------------SNLERVKNLCVQAGAHPQSIYTL  103 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~-~G~~V~~~-~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~~  103 (265)
                      .+.|.|+++-+|+++++.+.+ .+..++.. +|++                      ..++++.+.   .    .    +
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~---~----D----V   70 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE---A----D----V   70 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH--------S----E
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc---C----C----E
Confidence            478999999999999999998 67775444 5655                      122222221   1    1    6


Q ss_pred             eecCCChHHHHHHHHHHHHHhCCccEEEeCCCC
Q psy9256         104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  136 (265)
Q Consensus       104 ~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~  136 (265)
                      -.|.|.++.....++...+.  +..+++-+.|.
T Consensus        71 vIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   71 VIDFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             EEEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             EEEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            78999999988888887777  77788888884

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>KOG1198|consensus

Probab=94.90  E-value=0.1  Score=47.84  Aligned_cols=79  Identities=25%  Similarity=0.331  Sum_probs=55.3

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -+|+.+||.||++|.|.+........|+..+++.++.+..+-+    ++.++  .    ...|-.+++.    .+..++.
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~----k~lGA--d----~vvdy~~~~~----~e~~kk~  221 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELV----KKLGA--D----EVVDYKDENV----VELIKKY  221 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHH----HHcCC--c----EeecCCCHHH----HHHHHhh
Confidence            4688999999999999999888888886666677776665433    33332  1    2356666443    3344554


Q ss_pred             -hCCccEEEeCCCC
Q psy9256         124 -FGCLDILINNAGR  136 (265)
Q Consensus       124 -~g~ldilinnAg~  136 (265)
                       .+..|+++-+.|.
T Consensus       222 ~~~~~DvVlD~vg~  235 (347)
T KOG1198|consen  222 TGKGVDVVLDCVGG  235 (347)
T ss_pred             cCCCccEEEECCCC
Confidence             5789999999996

>KOG1200|consensus

Probab=94.89  E-value=0.11  Score=43.56  Aligned_cols=90  Identities=19%  Similarity=0.179  Sum_probs=64.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|-.+++.-..++=-.+.|+.|-..|.+..+.+ +.++...+...+++.                           .+.+
T Consensus        37 ~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~-DVS~a~~v~~~l~e~---------------------------~k~~   88 (256)
T KOG1200|consen   37 KGARVAVADLDSAAAEATAGDLGGYGDHSAFSC-DVSKAHDVQNTLEEM---------------------------EKSL   88 (256)
T ss_pred             cCcEEEEeecchhhHHHHHhhcCCCCccceeee-ccCcHHHHHHHHHHH---------------------------HHhc
Confidence            577888888888877788888877665554432 333444444443332                           3557


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+|||||||++-+.+-...+++|+..+..|.....
T Consensus        89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvf  126 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVF  126 (256)
T ss_pred             CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhH
Confidence            89999999999999998888889999988877775443

>PRK06194 hypothetical protein; Provisional

Probab=94.87  E-value=0.22  Score=43.52  Aligned_cols=87  Identities=16%  Similarity=0.171  Sum_probs=53.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-...-.......+...|.++....-+....+.+.+.+..                       .    .+.+|
T Consensus        30 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----------------------~----~~~~g   82 (287)
T PRK06194         30 GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADA-----------------------A----LERFG   82 (287)
T ss_pred             CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----------------------H----HHHcC
Confidence            55567776655545566666666676765554444444444333222                       1    24568


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      ++|++|||||........+.+.+.++..+..|..
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  116 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLW  116 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccH
Confidence            9999999999987766666666666655554443

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.87  E-value=0.18  Score=46.07  Aligned_cols=78  Identities=17%  Similarity=0.231  Sum_probs=51.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChH-HHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTK-YHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~  122 (265)
                      .|.+++|.|+ +++|...+..+...|+ .|+.+++++++++.+.    +.+.   .   ...|..+.+ +....+.....
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~----~lGa---~---~~i~~~~~~~~~~~~v~~~~~  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK----KFGA---T---DCVNPKDHDKPIQQVLVEMTD  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH----HcCC---C---EEEcccccchHHHHHHHHHhC
Confidence            5899999975 8999999888888899 6988888877665443    2332   1   123433321 23333222222


Q ss_pred             HhCCccEEEeCCC
Q psy9256         123 QFGCLDILINNAG  135 (265)
Q Consensus       123 ~~g~ldilinnAg  135 (265)
                        +..|+++++.|
T Consensus       255 --~g~d~vid~~g  265 (368)
T cd08300         255 --GGVDYTFECIG  265 (368)
T ss_pred             --CCCcEEEECCC
Confidence              47999999988

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK06114 short chain dehydrogenase; Provisional

Probab=94.84  E-value=0.26  Score=42.42  Aligned_cols=87  Identities=16%  Similarity=0.207  Sum_probs=50.8

Q ss_pred             CcEEEEcCCCCchh-HHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIG-EALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG-~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.+++++-+..-+ ..+...+.+.|.++....-+....+...+.+.                       ..    .+.+
T Consensus        32 G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~-----------------------~~----~~~~   84 (254)
T PRK06114         32 GADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVA-----------------------RT----EAEL   84 (254)
T ss_pred             CCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH-----------------------HH----HHHc
Confidence            55666766543222 34556666666665444333333333333222                       11    3456


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      |++|++|||||+.......+.+.++++..+..|..
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  119 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLT  119 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcch
Confidence            89999999999977666667777777766655543

>PTZ00117 malate dehydrogenase; Provisional

Probab=94.79  E-value=0.53  Score=42.58  Aligned_cols=38  Identities=24%  Similarity=0.279  Sum_probs=31.8

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLE   84 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~   84 (265)
                      .+.+.|.|+ +.+|..++..++..| +.+++.+++++.++
T Consensus         5 ~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~   43 (319)
T PTZ00117          5 RKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQ   43 (319)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccch
Confidence            456788897 779999999999988 78999999887654

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=94.78  E-value=0.17  Score=45.54  Aligned_cols=33  Identities=39%  Similarity=0.416  Sum_probs=28.7

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCe--EEEEecCC
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAK--LVLSARSS   80 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~--V~~~~r~~   80 (265)
                      .+.|+|+++.+|..++..++..|..  |++++|++
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            4788999999999999999998854  99999854

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.76  E-value=0.36  Score=43.27  Aligned_cols=44  Identities=27%  Similarity=0.275  Sum_probs=35.1

Q ss_pred             EEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHHHhC
Q psy9256          50 WITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCVQAG   94 (265)
Q Consensus        50 lItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~   94 (265)
                      .|.|+ +++|.++|..++..|  ..+++.+++++.++.....+....
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~   47 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHAS   47 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhc
Confidence            46677 579999999999988  679999999888777666665543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.72  E-value=0.16  Score=43.89  Aligned_cols=77  Identities=18%  Similarity=0.225  Sum_probs=55.0

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +++.|+.++=.||++|   -+++.+|+.|++|..++-+++.++.++....+.+-   .          .+-....++...
T Consensus        56 ~~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv---~----------i~y~~~~~edl~  119 (243)
T COG2227          56 FDLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGV---N----------IDYRQATVEDLA  119 (243)
T ss_pred             cCCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccc---c----------ccchhhhHHHHH
Confidence            4489999999999999   68999999999999999998888877765444331   1          122233344445


Q ss_pred             HHhCCccEEEeCC
Q psy9256         122 QQFGCLDILINNA  134 (265)
Q Consensus       122 ~~~g~ldilinnA  134 (265)
                      +..++.|++++.=
T Consensus       120 ~~~~~FDvV~cmE  132 (243)
T COG2227         120 SAGGQFDVVTCME  132 (243)
T ss_pred             hcCCCccEEEEhh
Confidence            5557888877654

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=94.71  E-value=0.39  Score=42.03  Aligned_cols=80  Identities=24%  Similarity=0.271  Sum_probs=53.2

Q ss_pred             EEEcCCCCchhHHHHHHHHHcC----CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          49 VWITGASSGIGEALALQLSKCG----AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +.|.|++|.+|..++..++..|    ..+++.+++++.++.....++..........+..  .+|+          .+.+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~--~~d~----------~~~~   68 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI--TDDP----------YEAF   68 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE--CCch----------HHHh
Confidence            3578998889999999999988    7899999999888877766655432110111111  1121          2334


Q ss_pred             CCccEEEeCCCCCccc
Q psy9256         125 GCLDILINNAGRSQRA  140 (265)
Q Consensus       125 g~ldilinnAg~~~~~  140 (265)
                      .+-|++|..+|..++.
T Consensus        69 ~~aDiVv~t~~~~~~~   84 (263)
T cd00650          69 KDADVVIITAGVGRKP   84 (263)
T ss_pred             CCCCEEEECCCCCCCc
Confidence            5678999988875543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK07063 short chain dehydrogenase; Provisional

Probab=94.64  E-value=0.27  Score=42.36  Aligned_cols=86  Identities=22%  Similarity=0.276  Sum_probs=49.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHH--cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSK--CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|-.+++++-+..-...++.++..  .+.++...--+....+.+.+.+.                       .+    .+
T Consensus        30 ~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----------------------~~----~~   82 (260)
T PRK07063         30 EGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVA-----------------------AA----EE   82 (260)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHH-----------------------HH----HH
Confidence            355677776655555566666654  34454444333333333333322                       11    34


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYA  157 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~  157 (265)
                      .+|++|++|||||+.....+...+.++++..+..|
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n  117 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVD  117 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhh
Confidence            56899999999998766555555566665554444

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.64  E-value=0.47  Score=40.13  Aligned_cols=39  Identities=23%  Similarity=0.290  Sum_probs=33.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      -++.||.++|.|| |.+|..-++.|++.|++|++++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3688999999998 77899999999999999999986543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.61  E-value=0.33  Score=44.15  Aligned_cols=40  Identities=25%  Similarity=0.237  Sum_probs=35.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      ..+.|+++.|.|. |.||.++|+.+...|++|+..+|+++.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            4789999999988 669999999999999999999987643

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.61  E-value=0.1  Score=42.97  Aligned_cols=47  Identities=28%  Similarity=0.236  Sum_probs=38.5

Q ss_pred             hhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHH
Q psy9256          37 INKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE   84 (265)
Q Consensus        37 ~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~   84 (265)
                      .......+.||++.|.|. +.||+++|+++...|++|+..+|+....+
T Consensus        27 ~~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   27 ERFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             cCCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            344556899999999988 89999999999999999999999876443

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07109 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.2  Score=45.44  Aligned_cols=86  Identities=22%  Similarity=0.247  Sum_probs=51.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...+...+...|.++....-+....+.+.+...                       .+    .+.+|
T Consensus        32 G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~-----------------------~~----~~~~g   84 (334)
T PRK07109         32 GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAAD-----------------------RA----EEELG   84 (334)
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHH-----------------------HH----HHHCC
Confidence            4456665544333344566666667776554434444443333222                       11    35678


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      ++|++|||||......+.+.+.++++..+..|.
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~  117 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTY  117 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHh
Confidence            999999999998777777777776666555443

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.56  E-value=0.09  Score=46.06  Aligned_cols=42  Identities=26%  Similarity=0.385  Sum_probs=36.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV   86 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~   86 (265)
                      .|++++|+|+++++|.+++..+...|+.|+.++++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999998876554433

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.52  E-value=0.37  Score=38.93  Aligned_cols=40  Identities=25%  Similarity=0.398  Sum_probs=31.7

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      .+-+.|- +-+|..+|++|++.|++|...+|++++.+++.+
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~   42 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE   42 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH
Confidence            3455566 689999999999999999999999877776654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=94.51  E-value=0.14  Score=48.07  Aligned_cols=46  Identities=24%  Similarity=0.419  Sum_probs=38.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKN   88 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~   88 (265)
                      .++.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++..+
T Consensus       176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~  222 (417)
T TIGR01035       176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAK  222 (417)
T ss_pred             CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence            3588999999998 999999999999999 679999998766554433

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08589 short chain dehydrogenase; Validated

Probab=94.49  E-value=0.29  Score=42.71  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=44.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+ .-....+..+.+.+.++....-+....+.+.+.+.+                       +    .+.+|
T Consensus        30 G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----------------------~----~~~~g   81 (272)
T PRK08589         30 GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASE-----------------------I----KEQFG   81 (272)
T ss_pred             CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHH-----------------------H----HHHcC
Confidence            5566776655 333445566655565554443333333333332222                       1    34578


Q ss_pred             CccEEEeCCCCCcc-cccchhhhHHHHHh
Q psy9256         126 CLDILINNAGRSQR-AAWEDIELEVDREL  153 (265)
Q Consensus       126 ~ldilinnAg~~~~-~~~~~~~~~~~~~~  153 (265)
                      ++|++|||||+... ..+.+.+.+.++..
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~  110 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKI  110 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHH
Confidence            99999999998643 44555555555433

>PRK06487 glycerate dehydrogenase; Provisional

Probab=94.43  E-value=0.3  Score=44.15  Aligned_cols=37  Identities=16%  Similarity=0.262  Sum_probs=33.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS   79 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~   79 (265)
                      .++.||++.|.|- |.||+++|+++...|++|+..+|.
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            4789999999998 899999999999999999988775

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.37  E-value=0.31  Score=43.48  Aligned_cols=83  Identities=20%  Similarity=0.224  Sum_probs=47.9

Q ss_pred             CcEEEEcCCC-CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGAS-SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |..+++.+-+ ..-....+..+...|.++....-+....+.+.+...                       ..    .+ +
T Consensus        36 Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~-----------------------~~----~~-~   87 (306)
T PRK07792         36 GATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVA-----------------------TA----VG-L   87 (306)
T ss_pred             CCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH-----------------------HH----HH-h
Confidence            4455665432 233445666666667776655444444443333222                       11    24 6


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTY  156 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~  156 (265)
                      |++|++|||||+.....+.+.+.++++..+..
T Consensus        88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~v  119 (306)
T PRK07792         88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAV  119 (306)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence            89999999999987766666665555544333

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=94.37  E-value=0.14  Score=48.07  Aligned_cols=45  Identities=27%  Similarity=0.439  Sum_probs=37.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKN   88 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~   88 (265)
                      ++.+++++|.|+ |++|..+++.+...|+ +|++++|++++.+++..
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~  224 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAE  224 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH
Confidence            578899999987 9999999999999997 78899998766655444

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.37  E-value=0.22  Score=45.16  Aligned_cols=42  Identities=24%  Similarity=0.346  Sum_probs=35.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV   86 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~   86 (265)
                      -.|++++|.|+ +++|...+......|++|+.+++++++++.+
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            35899999999 9999999888888899999998887766544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.36  E-value=0.099  Score=46.32  Aligned_cols=78  Identities=23%  Similarity=0.395  Sum_probs=52.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .+.+++|+|+++++|.+++......|++|+.++++.++.+.+    .+.+.   .   ...|..+.+....+    .+..
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~----~~~g~---~---~~~~~~~~~~~~~~----~~~~  207 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV----RALGA---D---VAVDYTRPDWPDQV----REAL  207 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCC---C---EEEecCCccHHHHH----HHHc
Confidence            478999999999999999998889999999998876655443    22321   1   12233333333332    3333


Q ss_pred             --CCccEEEeCCCC
Q psy9256         125 --GCLDILINNAGR  136 (265)
Q Consensus       125 --g~ldilinnAg~  136 (265)
                        .++|+++++.|.
T Consensus       208 ~~~~~d~vl~~~g~  221 (324)
T cd08244         208 GGGGVTVVLDGVGG  221 (324)
T ss_pred             CCCCceEEEECCCh
Confidence              259999998873

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=94.33  E-value=1.2  Score=40.28  Aligned_cols=43  Identities=23%  Similarity=0.210  Sum_probs=32.8

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCV   91 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~   91 (265)
                      .+.|+|+ +.+|..+|..++..|.  .+++.+.+++.++.....+.
T Consensus         5 Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~   49 (312)
T cd05293           5 KVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQ   49 (312)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHH
Confidence            4677796 9999999999988764  59999998876655444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08643 acetoin reductase; Validated

Probab=94.31  E-value=0.36  Score=41.41  Aligned_cols=83  Identities=27%  Similarity=0.299  Sum_probs=49.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...+...+.+.+.++....-+-...+.+.+.+.+                       +    .+.+|
T Consensus        26 G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----------------------~----~~~~~   78 (256)
T PRK08643         26 GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQ-----------------------V----VDTFG   78 (256)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----------------------H----HHHcC
Confidence            55677776555445556666666666665554444444444443322                       2    24568


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhh
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFT  155 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~  155 (265)
                      ++|++|||||+.......+.+.+.++..+.
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~  108 (256)
T PRK08643         79 DLNVVVNNAGVAPTTPIETITEEQFDKVYN  108 (256)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence            999999999986655555555555444433

>PRK07062 short chain dehydrogenase; Provisional

Probab=94.31  E-value=0.32  Score=41.98  Aligned_cols=35  Identities=29%  Similarity=0.538  Sum_probs=25.6

Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTY  156 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~  156 (265)
                      +.+|++|++|||||+.....+.+.+.+++...+..
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~  117 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELEL  117 (265)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence            45789999999999976666666666666555543

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.30  E-value=0.11  Score=46.01  Aligned_cols=78  Identities=14%  Similarity=0.280  Sum_probs=51.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|.+++|.|+++++|.+.+......|++|+.+.++.+..+.+.+    .+.   . .+  .+..+.+.    .+.+.+..
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~----~g~---~-~~--~~~~~~~~----~~~i~~~~  204 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA----LGI---G-PV--VSTEQPGW----QDKVREAA  204 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh----cCC---C-EE--EcCCCchH----HHHHHHHh
Confidence            58899999999999999999888899999998877665444432    221   1 11  12222222    22233334


Q ss_pred             C--CccEEEeCCCC
Q psy9256         125 G--CLDILINNAGR  136 (265)
Q Consensus       125 g--~ldilinnAg~  136 (265)
                      +  +.|++++++|.
T Consensus       205 ~~~~~d~v~d~~g~  218 (324)
T cd08292         205 GGAPISVALDSVGG  218 (324)
T ss_pred             CCCCCcEEEECCCC
Confidence            2  58999998883

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=94.29  E-value=1  Score=40.83  Aligned_cols=36  Identities=17%  Similarity=0.205  Sum_probs=30.0

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNL   83 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~   83 (265)
                      +.+.|.|+ +.+|..+|..++..| ++|++.+++++..
T Consensus         7 ~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~   43 (321)
T PTZ00082          7 RKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIP   43 (321)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchh
Confidence            45777785 779999999999999 4899999988764

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.22  E-value=0.11  Score=46.48  Aligned_cols=44  Identities=16%  Similarity=0.227  Sum_probs=38.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER   85 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~   85 (265)
                      .++.||.+.|.|.|+=+|+.+|..|.++|++|.++.|+....++
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e  198 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA  198 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence            47899999999999999999999999999999999776655443

>PLN02602 lactate dehydrogenase

Probab=94.20  E-value=0.72  Score=42.35  Aligned_cols=45  Identities=18%  Similarity=0.150  Sum_probs=34.6

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQ   92 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~   92 (265)
                      +.+.|+|+ +.+|.++|..++..|.  .+++.+.+++.++.....+..
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~   84 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQH   84 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHh
Confidence            56788896 8899999999998764  599999988766655444443

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=94.16  E-value=0.39  Score=41.15  Aligned_cols=85  Identities=18%  Similarity=0.231  Sum_probs=50.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...+...+...+..+....-+....+...+...                       .+    .+.+|
T Consensus        33 G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~-----------------------~~----~~~~~   85 (254)
T PRK08085         33 GAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIE-----------------------HI----EKDIG   85 (254)
T ss_pred             CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHH-----------------------HH----HHhcC
Confidence            5567777766555556666666666665554444444333333222                       11    24568


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYA  157 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~  157 (265)
                      ++|++|||||......+.+.+.++++..+..|
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n  117 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVN  117 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHH
Confidence            99999999998766556666666655544433

>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG

Probab=94.14  E-value=3.6  Score=35.96  Aligned_cols=149  Identities=14%  Similarity=0.114  Sum_probs=80.2

Q ss_pred             HHhhhhccccCCcEEEEcCCCCchhHH-----HHHHHHHcCCeEEEEecCCCc--HHHH---------HHHH------HH
Q psy9256          35 EKINKRLNYFNNKVVWITGASSGIGEA-----LALQLSKCGAKLVLSARSSSN--LERV---------KNLC------VQ   92 (265)
Q Consensus        35 ~~~~~~~~~l~gk~vlItGas~GIG~a-----ia~~l~~~G~~V~~~~r~~~~--~~~~---------~~~~------~~   92 (265)
                      ..+...+.+-..|++.||++.+|-|+.     +|..+++.|.+|.+++-+...  +...         .+.+      ..
T Consensus        92 ~~l~~~~~~~~~~vi~vts~~~g~Gktt~a~nLA~~la~~g~~VllID~D~~~~~~~~~~~~~~~~gl~~~l~~~~~~~~  171 (274)
T TIGR03029        92 SQLMLRWFSEGRKALAVVSAKSGEGCSYIAANLAIVFSQLGEKTLLIDANLRDPVQHRNFKLSEQRGLSDILAGRSDLEV  171 (274)
T ss_pred             HHhhhhccCCCCeEEEEECCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCCCccHHHhcCCCCCCCHHHHhCCCCCHHH
Confidence            333333344457899999999999987     466777889999999764322  1111         0100      00


Q ss_pred             h--CCCCCcEEEEeecCC--ChH------HHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256          93 A--GAHPQSIYTLTLDVT--QTK------YHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus        93 ~--~~~~~~~~~~~~D~~--~~~------~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      .  .....++.+++....  ++.      .+..+++..   ..+.|++|-.++-...    .    .+-.........-+
T Consensus       172 i~~~~~~~~l~~lp~g~~~~~~~~~~~~~~~~~~l~~l---~~~yD~ViiD~pp~~~----~----~d~~~~~~~~d~vi  240 (274)
T TIGR03029       172 ITHIPALENLSVLPAGAIPPNPQELLARPAFTDLLNKV---MGDYDVVIVDTPSAEH----S----SDAQIVATRARGTL  240 (274)
T ss_pred             eeecCCCCCEEEEeCcCCCCCHHHHhCcHHHHHHHHHH---HhcCCEEEEeCCCccc----c----cHHHHHHHhCCeEE
Confidence            0  011235666665432  221      223333332   2467876655542111    0    11112222334566


Q ss_pred             eeeeccccChhHHHHHHHHHHhhcccccEEEe
Q psy9256         163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILIN  194 (265)
Q Consensus       163 ~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVn  194 (265)
                      .....+.+...+++++++.+.+...++=.+|.
T Consensus       241 lV~~~~~t~~~~~~~~~~~l~~~~~~~~G~Vl  272 (274)
T TIGR03029       241 IVSRVNETRLHELTSLKEHLSGVGVRVVGAVL  272 (274)
T ss_pred             EEEECCCCCHHHHHHHHHHHHhCCCCEEEEEe
Confidence            77778888888888888888765444434443

The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.13  E-value=0.33  Score=42.48  Aligned_cols=27  Identities=11%  Similarity=0.122  Sum_probs=15.4

Q ss_pred             ChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         171 QTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       171 ~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                      ....+..+.+.+...+++-.+=||+..
T Consensus       162 sKaAl~~l~r~la~el~~~gIrVn~v~  188 (271)
T PRK06505        162 AKAALEASVRYLAADYGPQGIRVNAIS  188 (271)
T ss_pred             hHHHHHHHHHHHHHHHhhcCeEEEEEe
Confidence            345555556666666665556666443

>PRK05872 short chain dehydrogenase; Provisional

Probab=94.12  E-value=0.24  Score=43.88  Aligned_cols=36  Identities=19%  Similarity=0.454  Sum_probs=27.1

Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYA  157 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~  157 (265)
                      +.+|++|++|||||+.....+.+.+.++++..+..|
T Consensus        81 ~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn  116 (296)
T PRK05872         81 ERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVN  116 (296)
T ss_pred             HHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHH
Confidence            456899999999999877777777777666555443

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.12  E-value=0.18  Score=44.65  Aligned_cols=79  Identities=19%  Similarity=0.212  Sum_probs=51.8

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|.+++|.|+++++|.+++......|++|+.+.++.++.+.++    +.+.   .   ...|..+.+..    +.+.+.
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~---~---~~~~~~~~~~~----~~~~~~  202 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK----ALGA---D---EVIDSSPEDLA----QRVKEA  202 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH----hcCC---C---EEecccchhHH----HHHHHH
Confidence            35789999999999999999999999999999888776544332    2221   1   11222222222    223333


Q ss_pred             h--CCccEEEeCCCC
Q psy9256         124 F--GCLDILINNAGR  136 (265)
Q Consensus       124 ~--g~ldilinnAg~  136 (265)
                      .  ...|+++++.|.
T Consensus       203 ~~~~~~d~vl~~~g~  217 (323)
T cd05282         203 TGGAGARLALDAVGG  217 (323)
T ss_pred             hcCCCceEEEECCCC
Confidence            3  358999998873

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.11  E-value=0.13  Score=47.02  Aligned_cols=77  Identities=22%  Similarity=0.302  Sum_probs=49.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|++++|.|+ +++|...+......|+ +|+.+++++++++-+.    +.+.   .   ...|..+++..+    .+.+.
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~----~~Ga---~---~~i~~~~~~~~~----~i~~~  255 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR----ELGA---T---ATVNAGDPNAVE----QVREL  255 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH----HcCC---c---eEeCCCchhHHH----HHHHH
Confidence            5889999985 8999998887778899 5888888776655443    2332   1   123333333222    23333


Q ss_pred             h-CCccEEEeCCCC
Q psy9256         124 F-GCLDILINNAGR  136 (265)
Q Consensus       124 ~-g~ldilinnAg~  136 (265)
                      . +..|++|.++|.
T Consensus       256 ~~~g~d~vid~~G~  269 (371)
T cd08281         256 TGGGVDYAFEMAGS  269 (371)
T ss_pred             hCCCCCEEEECCCC
Confidence            3 368999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN00203 glutamyl-tRNA reductase

Probab=94.10  E-value=0.14  Score=49.39  Aligned_cols=45  Identities=24%  Similarity=0.391  Sum_probs=38.9

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNL   89 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~   89 (265)
                      +.++.++|.|+ |++|..+++.|...|+ +|++..|+.++.+.+.+.
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~  309 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREE  309 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH
Confidence            78999999999 9999999999999997 699999988777665543

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.09  E-value=0.33  Score=42.66  Aligned_cols=33  Identities=6%  Similarity=0.140  Sum_probs=23.0

Q ss_pred             CccEEEeCCCCCcc----cccchhhhHHHHHhhhccc
Q psy9256         126 CLDILINNAGRSQR----AAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       126 ~ldilinnAg~~~~----~~~~~~~~~~~~~~~~~~~  158 (265)
                      ++|++|||||+..+    ..+.+.+.++++..+..|.
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~  119 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISV  119 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhh
Confidence            47999999998643    3455666777776665554

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.09  E-value=0.3  Score=42.95  Aligned_cols=40  Identities=23%  Similarity=0.291  Sum_probs=34.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE   84 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~   84 (265)
                      +|.+++|.|+++++|.++++.....|++|+.+.+++++.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  181 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA  181 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5789999999999999999988899999998887765443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.08  E-value=0.2  Score=44.64  Aligned_cols=39  Identities=21%  Similarity=0.187  Sum_probs=34.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      .++.||.++|.|.|.=+|+.++..|.++|++|.++....
T Consensus       160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T  198 (287)
T PRK14176        160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT  198 (287)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC
Confidence            368999999999999999999999999999998876433

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.06  E-value=0.29  Score=42.45  Aligned_cols=119  Identities=19%  Similarity=0.159  Sum_probs=69.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..+.++.++|.|+ +|+|..+++.|++.|. ++.+++++.-+...+.+          ...+-..|+..++ ...+.+.+
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~R----------Q~l~~~~diG~~K-a~~a~~~l   87 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQR----------QVLHSDANIGQPK-VESAKDAL   87 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCccc----------ceeeeHhhCCCcH-HHHHHHHH
Confidence            4567788999887 7999999999999996 58888876544333322          1222234665543 33344555


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG  187 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g  187 (265)
                      ++..+..++-..+.-+         +.+..+..+      +-.-+..|-+|..+.+..+.+...+.+
T Consensus        88 ~~inp~v~i~~~~~~i---------~~~~~~~~~------~~~DlVvd~~D~~~~r~~ln~~~~~~~  139 (240)
T TIGR02355        88 TQINPHIAINPINAKL---------DDAELAALI------AEHDIVVDCTDNVEVRNQLNRQCFAAK  139 (240)
T ss_pred             HHHCCCcEEEEEeccC---------CHHHHHHHh------hcCCEEEEcCCCHHHHHHHHHHHHHcC
Confidence            5555555554332211         111122111      112355666777778887877766654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK10537 voltage-gated potassium channel; Provisional

Probab=94.05  E-value=3.2  Score=38.70  Aligned_cols=59  Identities=17%  Similarity=0.175  Sum_probs=42.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ..+++|.|. +.+|..++++|.++|.++++++.++  .+   + .   .  .....++..|.+|++..++.
T Consensus       240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~--~~---~-~---~--~~g~~vI~GD~td~e~L~~A  298 (393)
T PRK10537        240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLG--LE---H-R---L--PDDADLIPGDSSDSAVLKKA  298 (393)
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECch--hh---h-h---c--cCCCcEEEeCCCCHHHHHhc
Confidence            457888888 5799999999999999988887541  11   1 1   1  12355788999999887766

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.05  E-value=0.74  Score=41.40  Aligned_cols=39  Identities=31%  Similarity=0.374  Sum_probs=34.4

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      ...+.||++.|.|- +.||+++|+.+...|++|+..+|+.
T Consensus       117 ~~~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~  155 (303)
T PRK06436        117 TKLLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSY  155 (303)
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            35799999999998 7899999998888899999998864

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.04  E-value=0.18  Score=43.19  Aligned_cols=37  Identities=32%  Similarity=0.452  Sum_probs=31.0

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARS   79 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~   79 (265)
                      ..+.++.++|.|+ +|+|..+++.|++.|. ++.+++.+
T Consensus        17 ~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          17 EKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4567788999887 8999999999999997 57777764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=94.03  E-value=0.18  Score=45.31  Aligned_cols=77  Identities=21%  Similarity=0.265  Sum_probs=50.6

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ..|++++|+|+ +++|...+..+...|++ |+.+++++++.+.+.    +.+.   .   ...|..+.+ .+.+    .+
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~----~~ga---~---~~i~~~~~~-~~~~----~~  225 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK----ALGA---D---FVINSGQDD-VQEI----RE  225 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCC---C---EEEcCCcch-HHHH----HH
Confidence            34899999986 89999998888888999 998888776654442    2332   1   123433333 2222    22


Q ss_pred             Hh--CCccEEEeCCCC
Q psy9256         123 QF--GCLDILINNAGR  136 (265)
Q Consensus       123 ~~--g~ldilinnAg~  136 (265)
                      ..  .+.|++|.+.|.
T Consensus       226 ~~~~~~~d~vid~~g~  241 (339)
T cd08239         226 LTSGAGADVAIECSGN  241 (339)
T ss_pred             HhCCCCCCEEEECCCC
Confidence            22  268999998883

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02928 oxidoreductase family protein

Probab=94.02  E-value=0.63  Score=42.65  Aligned_cols=38  Identities=37%  Similarity=0.465  Sum_probs=34.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      ..+.||++.|.|- |.||+++|+++...|++|+..+|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            4689999999998 8899999999999999999998864

>PRK05855 short chain dehydrogenase; Validated

Probab=94.02  E-value=0.3  Score=47.00  Aligned_cols=87  Identities=17%  Similarity=0.153  Sum_probs=54.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-...++..+...|.++....-+-...+.+.+.+.+                       +    .+.+
T Consensus       338 ~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~-----------------------~----~~~~  390 (582)
T PRK05855        338 EGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEW-----------------------V----RAEH  390 (582)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH-----------------------H----HHhc
Confidence            355667766554444556666655666655544444444444333222                       1    3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      |++|++|||||+...+.+.+.+.+++...+..|.
T Consensus       391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~  424 (582)
T PRK05855        391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNL  424 (582)
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhh
Confidence            8999999999998777777777777776666654

>PRK08339 short chain dehydrogenase; Provisional

Probab=94.01  E-value=0.4  Score=41.68  Aligned_cols=36  Identities=14%  Similarity=0.194  Sum_probs=27.8

Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      ++|++|++|||||+.....+.+.+.++++..+..|.
T Consensus        82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~  117 (263)
T PRK08339         82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLL  117 (263)
T ss_pred             hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            368999999999987767777777777776665554

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=94.01  E-value=0.93  Score=41.17  Aligned_cols=46  Identities=26%  Similarity=0.169  Sum_probs=38.4

Q ss_pred             HHHHHhhhh----ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec
Q psy9256          32 FFIEKINKR----LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR   78 (265)
Q Consensus        32 ~~~~~~~~~----~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r   78 (265)
                      ..+...|.+    ..++.||++-|.|. |.||..+|+++..-|++|+..++
T Consensus       124 ~~~~g~W~~~~~~g~el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~  173 (324)
T COG0111         124 SQRRGEWDRKAFRGTELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDP  173 (324)
T ss_pred             HHHcCCccccccccccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECC
Confidence            445555554    23688999999998 78999999999999999999998

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=93.97  E-value=0.12  Score=46.58  Aligned_cols=127  Identities=18%  Similarity=0.085  Sum_probs=80.8

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      ....+|-||++=-|.-+|++|+++|-+-++.+|+.+++..+..++-      .+...+++.+  ++.       +.+.-.
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG------~~~~~~p~~~--p~~-------~~~~~~   70 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG------PEAAVFPLGV--PAA-------LEAMAS   70 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC------ccccccCCCC--HHH-------HHHHHh
Confidence            3568899999999999999999999999999999999988877652      4444555555  333       334456


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHH-Hhhccc-ccEEEecccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAV-IQQFGC-LDILINNAGR  198 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i-~~~~g~-ldilVnnAG~  198 (265)
                      +..+++|++|=...     ..+...+++.      .--...+|+|-+..+-+...+. .++--+ --.+|++-|+
T Consensus        71 ~~~VVlncvGPyt~-----~g~plv~aC~------~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cGF  134 (382)
T COG3268          71 RTQVVLNCVGPYTR-----YGEPLVAACA------AAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCGF  134 (382)
T ss_pred             cceEEEeccccccc-----cccHHHHHHH------HhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCCC
Confidence            78899999994322     1222233332      2223567888775553333222 222222 2345556664

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=93.96  E-value=1.2  Score=34.69  Aligned_cols=33  Identities=39%  Similarity=0.640  Sum_probs=27.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGA-KLVLSARS   79 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~   79 (265)
                      .+.++|.|+ +|+|..+++.|++.|. ++.+++.+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCc
Confidence            456788777 8999999999999998 58888864

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.95  E-value=0.14  Score=45.54  Aligned_cols=38  Identities=18%  Similarity=0.203  Sum_probs=34.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      ++.||.++|.|.|.=+|+.++..|.+.|++|+++.++.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            78999999999998899999999999999999887643

>PRK07677 short chain dehydrogenase; Provisional

Probab=93.93  E-value=0.43  Score=40.89  Aligned_cols=84  Identities=24%  Similarity=0.266  Sum_probs=46.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-...+...+...+.++....-+....+.+.+.+.+                       .    .+.+
T Consensus        24 ~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----------------------~----~~~~   76 (252)
T PRK07677         24 EGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQ-----------------------I----DEKF   76 (252)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-----------------------H----HHHh
Confidence            355677776554434455555555555555443333333333332221                       1    2456


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhh
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFT  155 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~  155 (265)
                      |++|++|||||......+.+.+.+.++..+.
T Consensus        77 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~  107 (252)
T PRK07677         77 GRIDALINNAAGNFICPAEDLSVNGWNSVID  107 (252)
T ss_pred             CCccEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence            8899999999986555555555555544443

>PLN02740 Alcohol dehydrogenase-like

Probab=93.93  E-value=0.28  Score=45.15  Aligned_cols=79  Identities=20%  Similarity=0.215  Sum_probs=51.3

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChH-HHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTK-YHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~  121 (265)
                      -.|++++|.|+ +++|...+......|+ +|+.+++++++++.+++    .+.   ..   ..|..+.+ +...   .++
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~----~Ga---~~---~i~~~~~~~~~~~---~v~  262 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKE----MGI---TD---FINPKDSDKPVHE---RIR  262 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH----cCC---cE---EEecccccchHHH---HHH
Confidence            35889999986 8999999888888899 59989888777665533    331   11   22333321 2222   222


Q ss_pred             HHh-CCccEEEeCCCC
Q psy9256         122 QQF-GCLDILINNAGR  136 (265)
Q Consensus       122 ~~~-g~ldilinnAg~  136 (265)
                      +.. +..|+++.++|.
T Consensus       263 ~~~~~g~dvvid~~G~  278 (381)
T PLN02740        263 EMTGGGVDYSFECAGN  278 (381)
T ss_pred             HHhCCCCCEEEECCCC
Confidence            222 269999999984

>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase

Probab=93.92  E-value=3.3  Score=34.67  Aligned_cols=129  Identities=14%  Similarity=0.195  Sum_probs=71.1

Q ss_pred             CCcEEEEcCCCCchhHH-----HHHHHHH-cCCeEEEEecCCCc--HHH---------HHHH-------HHHh--CCCCC
Q psy9256          45 NNKVVWITGASSGIGEA-----LALQLSK-CGAKLVLSARSSSN--LER---------VKNL-------CVQA--GAHPQ   98 (265)
Q Consensus        45 ~gk~vlItGas~GIG~a-----ia~~l~~-~G~~V~~~~r~~~~--~~~---------~~~~-------~~~~--~~~~~   98 (265)
                      .+|++.||++.+|.|+.     +|..|++ .|.+|.+++-+...  +..         +.+.       +.+.  ..+..
T Consensus        34 ~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~i~~~~~~  113 (207)
T TIGR03018        34 NNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDADLRRPSLHRTLGLEAEPGLSDCLLDPVLDLADVLVPTNIG  113 (207)
T ss_pred             CCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECCCCChhhhheeCCCCCCCHHHHHcCCCCCHHHHhccCCCC
Confidence            46899999999999987     4566665 59999999866433  111         0010       1111  00123


Q ss_pred             cEEEEeecCC--------ChHHHHHHHHHHHHHhCCccE-EEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccc
Q psy9256          99 SIYTLTLDVT--------QTKYHRRCFDAVIQQFGCLDI-LINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDV  169 (265)
Q Consensus        99 ~~~~~~~D~~--------~~~~~~~~~~~~~~~~g~ldi-linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv  169 (265)
                      .+.+++..-.        +.+.+..+++.++++++. |+ +|.+.......        ... .+......-+.....+.
T Consensus       114 ~l~vl~~g~~~~~~~~~~~~~~l~~~l~~l~~~y~~-D~IiiD~pp~~~~~--------~~~-~l~~~aD~viiV~~~~~  183 (207)
T TIGR03018       114 RLSLLPAGRRHPNPTELLASQRMRSLLHELARRYPD-RIIIIDTPPLLVFS--------EAR-ALARLVGQIVLVVEEGR  183 (207)
T ss_pred             CEEEEeCCCCCCCHHHHhCcHHHHHHHHHHHhhCCC-CEEEEECCCCcchh--------HHH-HHHHhCCEEEEEEECCC
Confidence            4555554322        122345555566666544 64 44444322111        111 11122345666777788


Q ss_pred             cChhHHHHHHHHHH
Q psy9256         170 TQTKYHRRCFDAVI  183 (265)
Q Consensus       170 ~~~~~v~~~~~~i~  183 (265)
                      +...+++++++.+.
T Consensus       184 ~~~~~~~~~~~~l~  197 (207)
T TIGR03018       184 TTQEAVKEALSALE  197 (207)
T ss_pred             CCHHHHHHHHHHhc
Confidence            88888888888776

Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.92  E-value=0.16  Score=43.89  Aligned_cols=33  Identities=6%  Similarity=-0.014  Sum_probs=23.3

Q ss_pred             ccEEEeCCCCCcc----cccchhhhHHHHHhhhcccC
Q psy9256         127 LDILINNAGRSQR----AAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       127 ldilinnAg~~~~----~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +|++|||||+..+    ..+.+.+.++++..+..|..
T Consensus        84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~  120 (252)
T PRK06079         84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAY  120 (252)
T ss_pred             CCEEEEcccccccccccCCcccCCHHHHHHHhCcccH
Confidence            5899999998653    34556677777777666553

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=93.92  E-value=0.24  Score=46.20  Aligned_cols=44  Identities=16%  Similarity=0.095  Sum_probs=34.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC---eEEEEecCCCcHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA---KLVLSARSSSNLERVKN   88 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~   88 (265)
                      .|.+++|.||++++|...+......|+   +|+.+++++++++.+++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            578999999999999998776655543   79999988877765544

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK07478 short chain dehydrogenase; Provisional

Probab=93.91  E-value=0.42  Score=40.97  Aligned_cols=85  Identities=24%  Similarity=0.260  Sum_probs=47.1

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..=...+..++...|.++....-+....+...+.+.                       .+    .+.+|
T Consensus        30 G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----------------------~~----~~~~~   82 (254)
T PRK07478         30 GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVA-----------------------LA----VERFG   82 (254)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH-----------------------HH----HHhcC
Confidence            5567777655443445556666666565544334434433333322                       22    24568


Q ss_pred             CccEEEeCCCCCcc-cccchhhhHHHHHhhhcc
Q psy9256         126 CLDILINNAGRSQR-AAWEDIELEVDRELFTYA  157 (265)
Q Consensus       126 ~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~~  157 (265)
                      ++|++|||||+... ..+.+.+.++++..+..|
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N  115 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATN  115 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHH
Confidence            99999999998643 344455555555444443

>KOG1478|consensus

Probab=93.91  E-value=0.82  Score=40.04  Aligned_cols=89  Identities=19%  Similarity=0.130  Sum_probs=61.3

Q ss_pred             CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256          80 SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      --.+.-+.+.+.+..  .+....+.+--++.+..++.....++.+++-                               .
T Consensus        14 glGl~i~~RLl~~~D--e~~~ltl~ltcR~~~kae~vc~~lk~f~p~~-------------------------------~   60 (341)
T KOG1478|consen   14 GLGLAICKRLLAEDD--ENVRLTLCLTCRNMSKAEAVCAALKAFHPKS-------------------------------T   60 (341)
T ss_pred             cccHHHHHHHHhccC--CceeEEEEEEeCChhHHHHHHHHHHHhCCCc-------------------------------e
Confidence            345555666655432  2333444444455555555555556555431                               2


Q ss_pred             CceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       160 ~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                      .++.++..|+++..++.++..++.+++.++|.+..|||+...
T Consensus        61 i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~  102 (341)
T KOG1478|consen   61 IEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPN  102 (341)
T ss_pred             eEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCC
Confidence            467889999999999999999999999999999999997643

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=93.90  E-value=0.29  Score=43.45  Aligned_cols=42  Identities=26%  Similarity=0.402  Sum_probs=35.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV   86 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~   86 (265)
                      .|.+++|.|+++++|.++++.....|++++++.+++++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999988888776555444

>KOG1372|consensus

Probab=93.90  E-value=0.23  Score=43.25  Aligned_cols=76  Identities=21%  Similarity=0.128  Sum_probs=59.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHH--hC-CCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQ--AG-AHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .|+++|||-++-=|.-+|+-|+.+|+.|.-+-|+.+..+...-+..-  .. .++.+....-.|++|.+++.++++.++
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik  106 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK  106 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence            45999999999999999999999999999888877776654433221  11 135677788899999999998866654

>PRK08862 short chain dehydrogenase; Provisional

Probab=93.85  E-value=0.47  Score=40.41  Aligned_cols=84  Identities=15%  Similarity=0.084  Sum_probs=46.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...+++++.+.|..+.....+....+...+.+.                       .+    .+.+|
T Consensus        29 G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~-----------------------~~----~~~~g   81 (227)
T PRK08862         29 GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFD-----------------------AI----EQQFN   81 (227)
T ss_pred             CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHH-----------------------HH----HHHhC
Confidence            5567777766654455666665556555443333333333333222                       22    34667


Q ss_pred             -CccEEEeCCCCCcc-cccchhhhHHHHHhhhc
Q psy9256         126 -CLDILINNAGRSQR-AAWEDIELEVDRELFTY  156 (265)
Q Consensus       126 -~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~  156 (265)
                       ++|++|||||.... ..+.+.+.+++...+..
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~  114 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSS  114 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHH
Confidence             89999999986443 34445555555544433

>cd08230 glucose_DH Glucose dehydrogenase

Probab=93.85  E-value=0.13  Score=46.82  Aligned_cols=78  Identities=22%  Similarity=0.348  Sum_probs=48.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ..|++++|+|+ +++|...+..+...|++|+.++|+....++. +.+++.+.   .  .  .|..+.+ ...     ...
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~-~~~~~~Ga---~--~--v~~~~~~-~~~-----~~~  235 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKA-DIVEELGA---T--Y--VNSSKTP-VAE-----VKL  235 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCC---E--E--ecCCccc-hhh-----hhh
Confidence            36889999986 8999999877777899999998853222221 22334442   1  1  2333322 111     122


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                      .+..|++|.++|.
T Consensus       236 ~~~~d~vid~~g~  248 (355)
T cd08230         236 VGEFDLIIEATGV  248 (355)
T ss_pred             cCCCCEEEECcCC
Confidence            3578999999983

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.74  E-value=0.41  Score=41.74  Aligned_cols=25  Identities=8%  Similarity=0.028  Sum_probs=14.2

Q ss_pred             hhHHHHHHHHHHhhcccccEEEecc
Q psy9256         172 TKYHRRCFDAVIQQFGCLDILINNA  196 (265)
Q Consensus       172 ~~~v~~~~~~i~~~~g~ldilVnnA  196 (265)
                      ...+..+.+.+...+++-++-||+.
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i  187 (262)
T PRK07984        163 KASLEANVRYMANAMGPEGVRVNAI  187 (262)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEeee
Confidence            3445555566666666655556543

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=93.74  E-value=1.1  Score=42.10  Aligned_cols=38  Identities=18%  Similarity=0.212  Sum_probs=34.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      .++.||++.|.|- |.||+.+|+++...|++|+..+++.
T Consensus       147 ~~L~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~~  184 (409)
T PRK11790        147 FEVRGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIED  184 (409)
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCc
Confidence            5799999999998 8899999999999999999988753

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=93.71  E-value=0.15  Score=45.35  Aligned_cols=78  Identities=14%  Similarity=0.230  Sum_probs=50.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|..++|.|+++++|.+++......|++|+.+.+++++.+.+    .+.+.  ..  .  +|..+.+..+.+ .... . 
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~--~~--v--~~~~~~~~~~~~-~~~~-~-  205 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL----KSLGC--DR--P--INYKTEDLGEVL-KKEY-P-  205 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH----HHcCC--ce--E--EeCCCccHHHHH-HHhc-C-
Confidence            588999999999999999888888899999988876555433    22321  11  1  232222222222 2221 1 


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                      +.+|+++++.|
T Consensus       206 ~~vd~v~~~~g  216 (329)
T cd08250         206 KGVDVVYESVG  216 (329)
T ss_pred             CCCeEEEECCc
Confidence            46899999887

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK06932 glycerate dehydrogenase; Provisional

Probab=93.67  E-value=0.77  Score=41.45  Aligned_cols=37  Identities=11%  Similarity=0.194  Sum_probs=33.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS   79 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~   79 (265)
                      .++.||++.|.|- +.||+++|+++...|++|+..+|.
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~  179 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHK  179 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCC
Confidence            4789999999998 899999999999999999888764

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=93.65  E-value=0.35  Score=42.08  Aligned_cols=120  Identities=18%  Similarity=0.138  Sum_probs=66.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..+.++.++|.|+ +|+|..+++.|+..|. ++.+++.+.-....+.++..          +-.-|+..++ .+.+.+.+
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l----------~~~~dvG~~K-a~~a~~~l   95 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVL----------HDDATIGQPK-VESARAAL   95 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhc----------CChhhCCChH-HHHHHHHH
Confidence            4678889999998 9999999999999996 58888876433333333211          1122443332 33334445


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGC  188 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~  188 (265)
                      ++..+..++-..+.-+         +.+..+..+      +-.-+..|-+|..+.+..+.+...+.+.
T Consensus        96 ~~lnp~v~i~~~~~~i---------~~~~~~~~~------~~~DiVi~~~D~~~~r~~ln~~~~~~~i  148 (245)
T PRK05690         96 ARINPHIAIETINARL---------DDDELAALI------AGHDLVLDCTDNVATRNQLNRACFAAKK  148 (245)
T ss_pred             HHHCCCCEEEEEeccC---------CHHHHHHHH------hcCCEEEecCCCHHHHHHHHHHHHHhCC
Confidence            5555555543333221         111111111      0112444555666777777777766553

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=93.64  E-value=0.81  Score=43.30  Aligned_cols=45  Identities=31%  Similarity=0.251  Sum_probs=36.0

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHc-------CC--eEEEEecCCCcHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKC-------GA--KLVLSARSSSNLERVKNLCV   91 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~-------G~--~V~~~~r~~~~~~~~~~~~~   91 (265)
                      -.+.|+|+++-+|.++|..++..       |.  ++++.+++++.++...-.+.
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~  154 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELE  154 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHH
Confidence            35889999999999999999987       54  68899998888776555443

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=93.63  E-value=0.13  Score=42.55  Aligned_cols=43  Identities=28%  Similarity=0.450  Sum_probs=35.0

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHH
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQ   92 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   92 (265)
                      +.|.|+ |-+|.++|..++..|++|.+.+++++.+++..+.+..
T Consensus         2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            556677 8899999999999999999999999888877666544

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=93.62  E-value=1.4  Score=37.54  Aligned_cols=36  Identities=31%  Similarity=0.406  Sum_probs=31.2

Q ss_pred             hCCccEEEeCCCCCccc-ccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGRSQRA-AWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~-~~~~~~~~~~~~~~~~~~~  159 (265)
                      +|++|++|||||+.... .+.+.+.+.++..+..|..
T Consensus        84 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~  120 (251)
T COG1028          84 FGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL  120 (251)
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHH
Confidence            78999999999998884 8888888888888887775

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=93.61  E-value=0.67  Score=39.79  Aligned_cols=38  Identities=26%  Similarity=0.412  Sum_probs=28.6

Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +.+|++|++|||||+.....+.+.+.++++..+..|..
T Consensus        81 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  118 (253)
T PRK08993         81 AEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIK  118 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhH
Confidence            45689999999999876666667777777766666554

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=93.60  E-value=0.41  Score=40.70  Aligned_cols=38  Identities=21%  Similarity=0.219  Sum_probs=33.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      -++.||.++|.|| |..|..=++.|++.|++|++++...
T Consensus         8 ~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~   45 (210)
T COG1648           8 LDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEF   45 (210)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            3689999999998 6788889999999999999987655

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=93.60  E-value=0.23  Score=44.36  Aligned_cols=42  Identities=29%  Similarity=0.374  Sum_probs=36.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV   86 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~   86 (265)
                      .+.+++|.|+++++|.+++......|++|+.+++++++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999998877766554

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=93.56  E-value=0.14  Score=48.02  Aligned_cols=44  Identities=18%  Similarity=0.283  Sum_probs=38.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVK   87 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   87 (265)
                      .+.|++++|.|+ +.||+.+++.+...|++|+++++++.+++.+.
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~  242 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA  242 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH
Confidence            368999999999 58999999999999999999999887765544

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=93.55  E-value=0.24  Score=43.54  Aligned_cols=41  Identities=24%  Similarity=0.308  Sum_probs=32.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLER   85 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~   85 (265)
                      .+|++++|.|+ +++|...+......|++ |+.+++++++.+.
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            37899999987 79999998888788997 8777776655543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=93.54  E-value=0.19  Score=43.82  Aligned_cols=42  Identities=21%  Similarity=0.273  Sum_probs=35.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV   86 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~   86 (265)
                      +|++++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            588999999999999999998888999999888766554433

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK06128 oxidoreductase; Provisional

Probab=93.54  E-value=1.7  Score=38.50  Aligned_cols=87  Identities=18%  Similarity=0.176  Sum_probs=50.6

Q ss_pred             CcEEEEcCCCCc--hhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~G--IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |-.++++.-+..  -...+...+...|.++....-+....+.+.+.+.+                       .    .+.
T Consensus        79 G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----------------------~----~~~  131 (300)
T PRK06128         79 GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVER-----------------------A----VKE  131 (300)
T ss_pred             CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHH-----------------------H----HHH
Confidence            455666543221  12345555555676665544444444444433322                       1    245


Q ss_pred             hCCccEEEeCCCCCc-ccccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGRSQ-RAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~~~-~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +|++|++|||||+.. ...+.+.+.++++..+..|..
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~  168 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVY  168 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhH
Confidence            689999999999854 345667777777777766654

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=93.53  E-value=0.85  Score=41.39  Aligned_cols=33  Identities=27%  Similarity=0.289  Sum_probs=27.9

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCC-------eEEEEecCC
Q psy9256          48 VVWITGASSGIGEALALQLSKCGA-------KLVLSARSS   80 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~-------~V~~~~r~~   80 (265)
                      .+.|+|+++.+|..+|..+...|.       .+++.++++
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence            377889999999999999998773       688988854

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK05599 hypothetical protein; Provisional

Probab=93.48  E-value=0.42  Score=41.06  Aligned_cols=20  Identities=10%  Similarity=0.089  Sum_probs=15.7

Q ss_pred             HHhCCccEEEeCCCCCcccc
Q psy9256         122 QQFGCLDILINNAGRSQRAA  141 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~  141 (265)
                      +.+|++|++|||||+.....
T Consensus        73 ~~~g~id~lv~nag~~~~~~   92 (246)
T PRK05599         73 ELAGEISLAVVAFGILGDQE   92 (246)
T ss_pred             HhcCCCCEEEEecCcCCCch
Confidence            35689999999999865443

>KOG0069|consensus

Probab=93.45  E-value=0.24  Score=44.97  Aligned_cols=97  Identities=19%  Similarity=0.187  Sum_probs=59.1

Q ss_pred             HHHhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHH------HhCCCCCcEEEEeecC
Q psy9256          34 IEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCV------QAGAHPQSIYTLTLDV  107 (265)
Q Consensus        34 ~~~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~~~~~D~  107 (265)
                      +...++...++.||++.|.|. ++||.++|++|...|+.+.-..|++...+...+...      +.. ....+..+.|-+
T Consensus       150 ~~~~~~~g~~~~gK~vgilG~-G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~-~~sD~ivv~~pL  227 (336)
T KOG0069|consen  150 WAGGWPLGYDLEGKTVGILGL-GRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELL-ANSDVIVVNCPL  227 (336)
T ss_pred             ccCCccccccccCCEEEEecC-cHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHH-hhCCEEEEecCC
Confidence            334456667899999999998 789999999999999667777776654444433211      111 113444555554


Q ss_pred             CChHHHHHHHH-HHHHHhCCccEEEeCC
Q psy9256         108 TQTKYHRRCFD-AVIQQFGCLDILINNA  134 (265)
Q Consensus       108 ~~~~~~~~~~~-~~~~~~g~ldilinnA  134 (265)
                      +...  ..++. +..+..++=-++||.|
T Consensus       228 t~~T--~~liNk~~~~~mk~g~vlVN~a  253 (336)
T KOG0069|consen  228 TKET--RHLINKKFIEKMKDGAVLVNTA  253 (336)
T ss_pred             CHHH--HHHhhHHHHHhcCCCeEEEecc
Confidence            4432  22222 2334445556777776

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.45  E-value=1.2  Score=41.28  Aligned_cols=37  Identities=27%  Similarity=0.412  Sum_probs=31.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARS   79 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~   79 (265)
                      ..+.++.++|.|+ +|+|..+++.|++.|. ++.+++++
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3567788888877 7999999999999998 58898886

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=93.45  E-value=0.18  Score=42.89  Aligned_cols=42  Identities=26%  Similarity=0.475  Sum_probs=35.8

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNL   89 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~   89 (265)
                      .+.|.||++.+|.++++.|++.|++|.+.+|++++.++..+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            367889889999999999999999999999988777665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=93.43  E-value=0.33  Score=44.74  Aligned_cols=43  Identities=28%  Similarity=0.241  Sum_probs=35.6

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV   86 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~   86 (265)
                      ..|.+++|+|+++++|.+.+......|++++.+.+++++.+.+
T Consensus       192 ~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         192 KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            3578999999999999999988888899988888766655443

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=93.36  E-value=0.59  Score=42.37  Aligned_cols=34  Identities=26%  Similarity=0.273  Sum_probs=28.6

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCC-------eEEEEecCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGA-------KLVLSARSS   80 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~-------~V~~~~r~~   80 (265)
                      +.+.|+|+++.+|..+|..++..|.       .+++.+.++
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   43 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQ   43 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCC
Confidence            3578889999999999999998774       688988754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=93.35  E-value=0.5  Score=42.41  Aligned_cols=76  Identities=22%  Similarity=0.383  Sum_probs=49.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ..|.+++|+|+++++|.++++.....|++|+.+.++ ++.    +.+.+.+.   .   ...|..+.+....+    . .
T Consensus       161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~----~~~~~~g~---~---~~~~~~~~~~~~~l----~-~  224 (350)
T cd08248         161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAI----PLVKSLGA---D---DVIDYNNEDFEEEL----T-E  224 (350)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chH----HHHHHhCC---c---eEEECCChhHHHHH----H-h
Confidence            358999999999999999999888899998887754 222    22223331   1   12333333333322    2 2


Q ss_pred             hCCccEEEeCCC
Q psy9256         124 FGCLDILINNAG  135 (265)
Q Consensus       124 ~g~ldilinnAg  135 (265)
                      .+.+|+++++.|
T Consensus       225 ~~~vd~vi~~~g  236 (350)
T cd08248         225 RGKFDVILDTVG  236 (350)
T ss_pred             cCCCCEEEECCC
Confidence            367999999987

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=93.33  E-value=0.082  Score=39.50  Aligned_cols=38  Identities=21%  Similarity=0.230  Sum_probs=32.0

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      .+++||.++|.|| |.+|..-++.|.+.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            4688999999999 8899999999999999999998765

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=93.29  E-value=0.16  Score=36.99  Aligned_cols=40  Identities=23%  Similarity=0.356  Sum_probs=32.2

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcC---CeEEEE-ecCCCcHHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCG---AKLVLS-ARSSSNLERVKNL   89 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G---~~V~~~-~r~~~~~~~~~~~   89 (265)
                      ..+|  |.+.+|.++++.|.+.|   .+|.+. +|++++.+++.++
T Consensus         2 I~iI--G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~   45 (96)
T PF03807_consen    2 IGII--GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKE   45 (96)
T ss_dssp             EEEE--STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHH
T ss_pred             EEEE--CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHh
Confidence            3455  66899999999999999   899866 8888777766554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK08223 hypothetical protein; Validated

Probab=93.26  E-value=0.24  Score=44.07  Aligned_cols=120  Identities=20%  Similarity=0.156  Sum_probs=70.4

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +..+.+..++|.|+ +|+|..+++.|++.|. ++.++|.+.=+...+.++          ..+-.-|+..++ .+.+.+.
T Consensus        22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ----------~l~~~~diG~~K-ve~a~~~   89 (287)
T PRK08223         22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQ----------AGAMMSTLGRPK-AEVLAEM   89 (287)
T ss_pred             HHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccc----------cCcChhHCCCcH-HHHHHHH
Confidence            34577888999988 7999999999999997 588888765444433332          112223444432 3444455


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChh--HHHHHHHHHHhhcc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTK--YHRRCFDAVIQQFG  187 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~--~v~~~~~~i~~~~g  187 (265)
                      +++-.+..++-+.+..+..         +..+..+.   ..   -+.+|-+|.-  +.+..+.+.....+
T Consensus        90 l~~iNP~v~V~~~~~~l~~---------~n~~~ll~---~~---DlVvD~~D~~~~~~r~~ln~~c~~~~  144 (287)
T PRK08223         90 VRDINPELEIRAFPEGIGK---------ENADAFLD---GV---DVYVDGLDFFEFDARRLVFAACQQRG  144 (287)
T ss_pred             HHHHCCCCEEEEEecccCc---------cCHHHHHh---CC---CEEEECCCCCcHHHHHHHHHHHHHcC
Confidence            5666677776666554431         11111111   11   1234666642  56677777666655

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.26  E-value=0.17  Score=45.26  Aligned_cols=76  Identities=22%  Similarity=0.329  Sum_probs=48.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh-
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF-  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-  124 (265)
                      +++++++||++++|.+.+......|++|+.+.+++++.+.+++    .+.   . .  ..|..+.+..+.    +.+.. 
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~----~g~---~-~--~i~~~~~~~~~~----v~~~~~  209 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK----IGA---E-Y--VLNSSDPDFLED----LKELIA  209 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC---c-E--EEECCCccHHHH----HHHHhC
Confidence            4555666999999999887777789999998887766554433    331   1 1  123333322222    23333 


Q ss_pred             -CCccEEEeCCC
Q psy9256         125 -GCLDILINNAG  135 (265)
Q Consensus       125 -g~ldilinnAg  135 (265)
                       +.+|+++++.|
T Consensus       210 ~~~~d~vid~~g  221 (324)
T cd08291         210 KLNATIFFDAVG  221 (324)
T ss_pred             CCCCcEEEECCC
Confidence             35899999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.25  E-value=1.2  Score=40.85  Aligned_cols=39  Identities=21%  Similarity=0.354  Sum_probs=32.8

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCC
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSS   80 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~   80 (265)
                      +..+.++.++|.|+ +|+|..+++.|+..|. ++.+++.+.
T Consensus        23 q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            34577889999998 8999999999999997 588888753

>PLN00015 protochlorophyllide reductase

Probab=93.24  E-value=0.42  Score=42.60  Aligned_cols=38  Identities=13%  Similarity=-0.105  Sum_probs=25.4

Q ss_pred             HHhCCccEEEeCCCCCccc-ccchhhhHHHHHhhhcccC
Q psy9256         122 QQFGCLDILINNAGRSQRA-AWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~-~~~~~~~~~~~~~~~~~~~  159 (265)
                      +.++++|++|||||+.... ...+.+.+.++..+..|..
T Consensus        71 ~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~  109 (308)
T PLN00015         71 RSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHL  109 (308)
T ss_pred             hcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhH
Confidence            3468999999999986443 3345556666666655553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	265
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-13
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		4e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-12
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-04
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		3e-12
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		3e-10
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		5e-06
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-10
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		1e-09
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		1e-09
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-09
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-05
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-09
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		5e-05
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-09
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-09
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-05
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		6e-09
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		6e-09
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		6e-09
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		8e-09
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-09
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-04
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-08
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-04
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-08
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-04
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-08
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-08
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		2e-08
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-08
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		4e-08
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		4e-08
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		4e-08
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		3e-06
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-08
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		5e-08
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-04
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		5e-08
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		5e-08
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		3e-07
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		7e-08
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		7e-08
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		8e-08
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		8e-08
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		9e-08
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		1e-07
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		1e-07
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-07
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		7e-04
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		1e-07
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		7e-04
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-07
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		7e-04
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-07
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-07
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-05
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		3e-07
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		3e-07
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-05
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		3e-07
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		3e-07
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		3e-07
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		3e-07
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		3e-07
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		4e-07
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		4e-07
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		4e-07
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		4e-07
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		5e-07
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		5e-07
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		5e-07
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		5e-07
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		5e-07
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		5e-07
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-04
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		5e-07
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		5e-07
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		5e-07
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		4e-04
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		5e-07
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		6e-07
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-04
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		6e-07
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-04
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		6e-07
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-04
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		7e-07
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		4e-04
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		7e-07
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		8e-07
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		8e-07
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		9e-07
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		9e-07
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-06
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		1e-06
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		1e-06
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		1e-06
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		1e-06
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		4e-05
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		1e-06
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		1e-06
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		1e-06
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		1e-06
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		5e-04
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		2e-06
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		2e-06
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-06
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		2e-06
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		2e-06
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		4e-05
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		2e-06
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-06
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-04
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-06
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-04
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-06
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-04
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-06
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-04
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		3e-06
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-06
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		1e-04
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		3e-06
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		4e-05
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		3e-06
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		4e-06
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		5e-06
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		6e-06
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		6e-06
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		7e-06
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		7e-06
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		5e-04
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		8e-06
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		9e-06
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		9e-06
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		9e-06
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		1e-05
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-05
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-05
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		1e-05
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		1e-05
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-05
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-05
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-05
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		2e-05
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		5e-04
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		2e-05
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		6e-04
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		2e-05
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-05
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		2e-05
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		6e-04
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		3e-05
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		6e-04
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		3e-05
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		3e-05
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		9e-05
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		4e-05
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		4e-05
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		4e-05
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		1e-04
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-05
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		4e-05
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		4e-05
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		3e-04
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		4e-05
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		5e-05
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		5e-05
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		5e-05
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		6e-05
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		6e-05
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		7e-05
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		8e-05
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		9e-04
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		8e-05
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		8e-05
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		8e-05
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		1e-04
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		1e-04
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-04
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-04
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-04
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-04
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-04
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		2e-04
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		2e-04
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-04
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		8e-04
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		2e-04
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		2e-04
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		3e-04
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		3e-04
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		4e-04
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		4e-04
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		4e-04
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		5e-04
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		6e-04
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		6e-04
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		7e-04
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		7e-04
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		8e-04
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		9e-04
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		9e-04

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 58/92 (63%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+NK V ITG+S+GIG   A+  ++ GA + ++ RSS  LE  + + +++G   + + ++
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DVT      +  ++ ++QFG +D+L+NNAG
Sbjct: 64  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAG 95

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW----EDIELEVDRELFE 217
           + ++  DVT      +  ++ ++QFG +D+L+NNAG +   A+     D  +++  +  +
Sbjct: 60  VNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 119
Query: 218 LNVFSVLSLSRIATSYFLAREQGGHLV-VTSSIAGIVGAP 256
           LN+ +V+ +++    + +A +  G +V V+S +AG    P
Sbjct: 120 LNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQP 157

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+ K V ITG+S+GIG + A+  +K GA++ ++ R+   LE  K   ++AG   + I  +
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DVT+        +  + +FG +DIL+NNAG +      + +  V  EL+   ++ +  
Sbjct: 84  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPV--ELYQKTFKLNFQ 141
Query: 164 TLTLDVTQTKYH 175
            +     +TK H
Sbjct: 142 AVIEMTQKTKEH 153

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 147 LEVDRELFTYAYRPS--IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR--SQRA 202
           LE  ++    A  P+  I  +  DVT+        +  + +FG +DIL+NNAG   +   
Sbjct: 63  LEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGT 122
Query: 203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI---VGAPY 257
           A  D  +E+ ++ F+LN  +V+ +++  T   L + +G  + V+S +AG     G PY
Sbjct: 123 ANTDQPVELYQKTFKLNFQAVIEMTQ-KTKEHLIKTKGEIVNVSSIVAGPQAHSGYPY 179

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 53/95 (55%)
Query: 41  LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
           +  F  KV  ITG+S+GIG A A+  ++ GAK+ ++ R +  LE  +   + AG   Q++
Sbjct: 1   MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNV 60
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            ++  DVT            + +FG LDIL+NNAG
Sbjct: 61  NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAG 95

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 47  KVVWITGASSGIGEALALQ---LSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           K V ITGAS+GIG+A AL+    S    KL+L+AR    LE +K    Q   + + ++  
Sbjct: 34  KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAK-VHVA 92
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIE 146
            LD+TQ +  +   + + Q+F  +DIL+NNAG      R  + A EDI+
Sbjct: 93  QLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQ 141

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 26/140 (18%)
Query: 142 WEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG---- 197
            E+++  +D+E F  A    ++   LD+TQ +  +   + + Q+F  +DIL+NNAG    
Sbjct: 73  LEELKKTIDQE-FPNA---KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALG 128
Query: 198 --RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA 255
             R  + A EDI+     ++F+ NV +++++++     F A+   G +V   SIAG    
Sbjct: 129 SDRVGQIATEDIQ-----DVFDTNVTALINITQAVLPIFQAK-NSGDIVNLGSIAGRDAY 182
Query: 256 PYS----------GSYTDHL 265
           P            G++TD L
Sbjct: 183 PTGSIYCASKFAVGAFTDSL 202

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  ITGA SG GE +A + +K GAK+V+  R  +  ERV      AG    +   +
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV------AGEIGDAALAV 60
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+++        +A + +FG +DIL+NNAG   +   ++ EL V+ E F      ++ 
Sbjct: 61  AADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKP--QNAEL-VEPEEFDRIVGVNVR 117
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RAAW 204
            + L  ++   H +   A  Q+   L++    AGR +   AW
Sbjct: 118 GVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAW 159

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 47/84 (55%)
Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT 110
           ITGAS GIG  +A  L+  G ++VL ARS  NLE+V +   ++  H Q    L LD+T  
Sbjct: 12  ITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDITDC 71
Query: 111 KYHRRCFDAVIQQFGCLDILINNA 134
                    + Q++G +DIL+N A
Sbjct: 72  TKADTEIKDIHQKYGAVDILVNAA 95

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 48  VVWITGASSGIGEALALQLSKCG-------AKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
           ++ ITGA  GIG A+AL+ ++           LVLS+R++++LE++   C   GA     
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD-- 61
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            T+T D++     RR    +++++G +D L+NNAG  +  A  D+  E
Sbjct: 62  -TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEE 108

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  +TGAS GIG+A+A  L++ GAK++ +A S S  + + +     G        +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------M 63
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFT 155
            L+VT  +       A+  +FG +DIL+NNAG        R +   W DI +E +     
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDI-METN----- 117
Query: 156 YAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 203
                SI+ L+  V +    +R     I   G +   + NAG++  AA
Sbjct: 118 ---LTSIFRLSKAVLRGMMKKR--QGRIINVGSVVGTMGNAGQANYAA 160

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
           + L+VT  +       A+  +FG +DIL+NNAG        R +   W DI         
Sbjct: 63  MALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDI--------M 114
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           E N+ S+  LS+      + + Q G ++   S+ G +G     +Y
Sbjct: 115 ETNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVGTMGNAGQANY 158

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  +TGAS GIG+A+A  L++ GAK++ +A S S  + + +     G        +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------M 63
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFT 155
            L+VT  +       A+  +FG +DIL+NNAG        R +   W DI +E +     
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDI-METN----- 117
Query: 156 YAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 203
                SI+ L+  V +    +R     I   G +   + NAG++  AA
Sbjct: 118 ---LTSIFRLSKAVLRGMMKKR--QGRIINVGSVVGTMGNAGQANYAA 160

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
           + L+VT  +       A+  +FG +DIL+NNAG        R +   W DI         
Sbjct: 63  MALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDI--------M 114
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           E N+ S+  LS+      + + Q G ++   S+ G +G     +Y
Sbjct: 115 ETNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVGTMGNAGQANY 158

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           +KV+ ITGAS GIGE +A +L   GAK++L AR  + +E +      AG    +     L
Sbjct: 4   DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG---TALAQVL 60
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DVT          A +  +G +D+L+NNAG
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAG 90

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TGAS GIG+A+A  L++ GAK++ +A S S  + + +     G        + L+
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------MALN 66
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFTYAY 158
           VT  +       A+  +FG +DIL+NNAG        R +   W DI +E +        
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDI-METN-------- 117
Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 203
             SI+ L+  V +    +R     I   G +   + NAG++  AA
Sbjct: 118 LTSIFRLSKAVLRGMMKKR--QGRIINVGSVVGTMGNAGQANFAA 160

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 17/98 (17%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
           + L+VT  +       A+  +FG +DIL+NNAG        R +   W DI         
Sbjct: 63  MALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDI--------M 114
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG 254
           E N+ S+  LS+      + + Q G ++   S+ G +G
Sbjct: 115 ETNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVGTMG 151

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  ITGAS GIGEA+A  L++ G  L L ARS   LE++ +  +Q       ++   LD
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ--EQGVEVFYHHLD 60
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           V++ +        V+++FG +D+++ NAG
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAG 89

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  +TGAS GIG+A+A  L++ GAK++ +A S S  + + +     G         
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------X 60
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
            L+VT  +       A+  +FG +DIL+NNAG        R +   W DI
Sbjct: 61  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDI 110

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  ITGAS GIGEA+A  L++ G  L L ARS   LE++ +  +Q       ++   LD
Sbjct: 25  KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ--EQGVEVFYHHLD 82
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           V++ +        V+++FG +D+++ NAG
Sbjct: 83  VSKAESVEEFSKKVLERFGDVDVVVANAG 111

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAH----PQSI 100
           N KV  +TGA+ GIG A A  L   GAK+ L      NLE    +  +A  H    PQ  
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAKVALV---DWNLE--AGVQCKAALHEQFEPQKT 60
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE 143
             +  DV   +  R  F  V+  FG LDIL+NNAG +    WE
Sbjct: 61  LFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWE 103

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 25/168 (14%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  +TGAS GIG+A+A  L++ GAK++ +A S S  + + +     G        +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------M 63
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFT 155
            L+VT  +       A+  +FG +DIL+NNA         R +   W DI +E +     
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDI-METN----- 117
Query: 156 YAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 203
                SI+ L+  V +    +R     I   G +   + NAG++  AA
Sbjct: 118 ---LTSIFRLSKAVLRGMMKKR--QGRIINVGSVVGTMGNAGQANYAA 160

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
           + L+VT  +       A+  +FG +DIL+NNA         R +   W DI         
Sbjct: 63  MALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDI--------M 114
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           E N+ S+  LS+      + + Q G ++   S+ G +G     +Y
Sbjct: 115 ETNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVGTMGNAGQANY 158

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 25/168 (14%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  +TGAS GIG+A+A  L++ GAK++ +A S S  + + +     G        +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------M 63
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFT 155
            L+VT  +       A+  +FG +DIL+NNA         R +   W DI +E +     
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDI-METN----- 117
Query: 156 YAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 203
                SI+ L+  V +    +R     I   G +   + NAG++  AA
Sbjct: 118 ---LTSIFRLSKAVLRGMMKKR--QGRIINVGSVVGTMGNAGQANYAA 160

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
           + L+VT  +       A+  +FG +DIL+NNA         R +   W DI         
Sbjct: 63  MALNVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDI--------M 114
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           E N+ S+  LS+      + + Q G ++   S+ G +G     +Y
Sbjct: 115 ETNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVGTMGNAGQANY 158

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + K   ITGAS+GIG+ +AL  ++ GA++ ++AR S  L+ V +     G     I   
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC- 88
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             DVTQ    R   D +  + G +DI + NAG     A  D+ LE
Sbjct: 89  --DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLE 131

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DVTQ    R   D +  + G +DI + NAG     A  D+ LE  + + + NV  V   +
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTA 148
Query: 228 RIATSYFLAREQGGHLVVTSSIAG 251
           + A    + +  GG ++ T+S++G
Sbjct: 149 QAAARAMVDQGLGGTIITTASMSG 172

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 34  IEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQA 93
           I+  +K ++  + +V  +TGAS GIG A+A +L   GA++VL+AR    L  V+   V A
Sbjct: 17  IDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA 76
Query: 94  GAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           G   +S      D++ +         V+   G  D+L+NNAG
Sbjct: 77  GGEAES---HACDLSHSDAIAAFATGVLAAHGRCDVLVNNAG 115

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 14/110 (12%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  K+  +TGAS GIG A+A  L+  GAK++ +A S +  + + +     GA+ +    L
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL---GANGKG---L 56
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
            L+VT         + +  +FG +DIL+NNAG        R +   W DI
Sbjct: 57  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDI 106

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 14/110 (12%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  K+  +TGAS GIG A+A  L+  GAK++ +A S +  + + +     GA+ +    L
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL---GANGKG---L 56
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
            L+VT         + +  +FG +DIL+NNAG        R +   W DI
Sbjct: 57  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDI 106

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 14/110 (12%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  K+  +TGAS GIG A+A  L+  GAK++ +A S +  + + +     GA+ +    L
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL---GANGKG---L 56
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
            L+VT         + +  +FG +DIL+NNAG        R +   W DI
Sbjct: 57  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDI 106

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
            + KV  +TG+  GIG A+A+ L + GAK+V++ A S+ + E+V +     G+       
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS---DAIA 72
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI-ELEVDR 151
           +  D+ Q     + FD  +  FG LDI ++N+G       +D+ E E DR
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDR 122

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
            + KV  +TG+  GIG A+A+ L + GAK+V++ A S+ + E+V +     G+       
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS---DAIA 72
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI-ELEVDR 151
           +  D+ Q     + FD  +  FG LDI ++N+G       +D+ E E DR
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDR 122

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +++  +TGAS GIG A+AL+L+  GAK+ ++  SS+         +   A     + +
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIA--AAGGEAFAV 83
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
             DV+Q       F AVI+++G LD+L+NNAG        R +R  W+ +
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSV 133

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 17/103 (16%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFELN 219
           DV+Q       F AVI+++G LD+L+NNAG        R +R  W+ +         +LN
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSV--------LDLN 137
Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           +  V   SR A    L +++ G ++  +S+ G +G P   +Y+
Sbjct: 138 LGGVFLCSRAAAKIML-KQRSGRIINIASVVGEMGNPGQANYS 179

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + +V  +TGAS GIG A+AL+L++ GA ++ +A + +  E +     QAG   +     
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAV-- 83
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ 138
            L+V          ++ +++FG L++L+NNAG +Q
Sbjct: 84  -LNVNDATAVDALVESTLKEFGALNVLVNNAGITQ 117

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           + VV +TGAS GIG+A+AL L K G K++++ ARS+   E V     Q  A+     T  
Sbjct: 1   SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSK---QIEAYGGQAITFG 57
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
            DV++           I  +G +D+++NNAG        R +++ W+++
Sbjct: 58  GDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEV 106

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 26/140 (18%)
Query: 123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAV 182
           + GC  +L+N A RS +AA E++  +++      AY     T   DV++           
Sbjct: 23  KAGC-KVLVNYA-RSAKAA-EEVSKQIE------AYGGQAITFGGDVSKEADVEAMMKTA 73
Query: 183 IQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYF 234
           I  +G +D+++NNAG        R +++ W+        E+ +LN+  V   ++ AT   
Sbjct: 74  IDAWGTIDVVVNNAGITRDTLLIRMKKSQWD--------EVIDLNLTGVFLCTQAATKIM 125
Query: 235 LAREQGGHLVVTSSIAGIVG 254
           + + + G ++  +S+ G++G
Sbjct: 126 MKKRK-GRIINIASVVGLIG 144

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 41  LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
           +  + +++  +TGAS GIG A+A  L + G K+V  AR+  N+E +   C  AG +P ++
Sbjct: 27  MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-YPGTL 85
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR--------AAWEDI 145
                D++  +     F A+  Q   +DI INNAG ++         + W+D+
Sbjct: 86  IPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDM 138

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TGASSG G A+A      G  ++ +AR +  L+ +        A+P     ++LD
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDL------VAAYPDRAEAISLD 59
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFT-YAYRPSIYTL 165
           VT  +        V+ ++G +D+L+NNAGR+Q  A+E+      R+LF  + + P+  T 
Sbjct: 60  VTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTR 119
Query: 166 TL 167
            L
Sbjct: 120 AL 121

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
           AY      ++LDVT  +        V+ ++G +D+L+NNAGR+Q  A+E+      R+LF
Sbjct: 48  AYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLF 107
Query: 217 ELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAG 251
           EL+VF    L+R        RE+G G +V  SS  G
Sbjct: 108 ELHVFGPARLTRALLPQ--XRERGSGSVVNISSFGG 141

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           NKV  +TGAS GIG A+A +L+  G  +V++ A  ++  E V      AG       T  
Sbjct: 27  NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGK---ALTAQ 83
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            DV+     RR F    + FG +D+L+NNAG
Sbjct: 84  ADVSDPAAVRRLFATAEEAFGGVDVLVNNAG 114

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  LSK GA +VL+ARS   L++V + C++ GA   S
Sbjct: 3   RPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGA--AS 60
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 61  AHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILN 94

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  LSK GA +VL+ARS   L++V + C++ GA   S
Sbjct: 12  RPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGA--AS 69
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 70  AHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILN 103

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F ++VV ITG  SG+G A A++L+  GAKL L   SS  LE  K   ++  A    + T 
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET-APDAEVLTT 69
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV+          A  ++FG +D   NNAG
Sbjct: 70  VADVSDEAQVEAYVTATTERFGRIDGFFNNAG 101

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  +TGAS GIG+A+AL+L + GA ++ +A S+S  E++       G        L
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAG---L 81
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFT 155
            LDV+  +      + + Q  G   I++NNAG        R +   W D+   V+  L +
Sbjct: 82  VLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDV---VNTNLNS 138
Query: 156 YAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 203
             YR S   L   +T+ ++ R      I   G +   + NAG++  AA
Sbjct: 139 L-YRLSKAVLR-GMTKARWGR------IINIGSVVGAMGNAGQTNYAA 178

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 31  LFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLC 90
           L+F   +  R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C
Sbjct: 16  LYFQGHMEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC 75
Query: 91  VQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
           ++ GA   S + +   +    +  +      +  G LD+LI N
Sbjct: 76  LELGA--ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 116

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVD-RELFELNV 220
           I T  +DV      +   D+ ++Q G LDI++ NAG        D   E D  E+ ++N+
Sbjct: 78  IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINL 137
Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             V    +    + +A  +GG +++TSS+ G+   P++G Y
Sbjct: 138 AGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHY 178

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 43  YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVK-NLCVQAGAHPQSI 100
               KV  +TG++SGIG  +A  L+  GA +VL+    ++ +E+V+  L  Q   H   +
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ---HGVKV 57
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
                D+++ +  R   D  ++Q G +DIL+NNAG    A  ED   E
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTE 105

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG 187
           DI++N  G +        E+E  R      +   +     D+++ +  R   D  ++Q G
Sbjct: 30  DIVLNGFGDAA-------EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82
Query: 188 CLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG-GHLVVT 246
            +DIL+NNAG    A  ED   E    +  LN+ +V   +  A  +   ++QG G ++  
Sbjct: 83  RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM--KKQGFGRIINI 140
Query: 247 SSIAGIVGAPYSGSY 261
           +S  G+V +    +Y
Sbjct: 141 ASAHGLVASANKSAY 155

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 43  YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVK-NLCVQAGAHPQSI 100
               KV  +TG++SGIG  +A  L+  GA +VL+    ++ +E+V+  L  Q   H   +
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ---HGVKV 57
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
                D+++ +  R   D  ++Q G +DIL+NNAG    A  ED   E
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTE 105

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG 187
           DI++N  G       +  E+E  R      +   +     D+++ +  R   D  ++Q G
Sbjct: 30  DIVLNGFG-------DAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82
Query: 188 CLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG-GHLVVT 246
            +DIL+NNAG    A  ED   E    +  LN+ +V   +  A  +   ++QG G ++  
Sbjct: 83  RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM--KKQGFGRIINI 140
Query: 247 SSIAGIVGAPYSGSY 261
           +S  G+V +    +Y
Sbjct: 141 ASAHGLVASANKSAY 155

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 43  YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVK-NLCVQAGAHPQSI 100
               KV  +TG++SGIG  +A  L+  GA +VL+    ++ +E+V+  L  Q   H   +
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ---HGVKV 57
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
                D+++ +  R   D  ++Q G +DIL+NNAG    A  ED   E
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTE 105

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG 187
           DI++N  G       +  E+E  R      +   +     D+++ +  R   D  ++Q G
Sbjct: 30  DIVLNGFG-------DAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82
Query: 188 CLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG-GHLVVT 246
            +DIL+NNAG    A  ED   E    +  LN+ +V   +  A  +   ++QG G ++  
Sbjct: 83  RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM--KKQGFGRIINI 140
Query: 247 SSIAGIVGAPYSGSY 261
           +S  G+V +    +Y
Sbjct: 141 ASAHGLVASANKSAY 155

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 41  LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
           ++    K+  +TGASSGIG A AL  ++ GAK+V++AR+ + L  + +   +        
Sbjct: 3   MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTD---EIAGGGGEA 59
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             L  DV     H    +  +++FG LD   NNAG
Sbjct: 60  AALAGDVGDEALHEALVELAVRRFGGLDTAFNNAG 94

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K   +TGAS GIG ++ALQL++ G  + ++   S   E+ + +  +  A     + +  +
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSK--EKAEAVVEEIKAKGVDSFAIQAN 62
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
           V      +     V+ QFG LD+L+NNAG        R +   W+D+
Sbjct: 63  VADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDV 109

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRE 214
           + +  +V      +     V+ QFG LD+L+NNAG        R +   W+D+       
Sbjct: 57  FAIQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDV------- 109
Query: 215 LFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             + N+  V +  + AT   L R++ G ++  SS+ G VG P   +Y
Sbjct: 110 -IDTNLKGVFNCIQKATPQXL-RQRSGAIINLSSVVGAVGNPGQANY 154

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 12/106 (11%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARS-----SSNLERVKNLCVQAGAHPQSIY 101
           KVV ITG+S+G+G+++A++ +   AK+V++ RS     +S LE +K +  +A A      
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA------ 61
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIEL 147
            +  DVT          + I++FG LD++INNAG +   +  ++ L
Sbjct: 62  -VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSL 106

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K   +TGAS GIG ++ALQL++ G  + ++   S   E+ + +  +  A     + +  +
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSK--EKAEAVVEEIKAKGVDSFAIQAN 68
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
           V      +     V+ QFG LD+L+NNAG        R +   W+D+
Sbjct: 69  VADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDV 115

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRE 214
           + +  +V      +     V+ QFG LD+L+NNAG        R +   W+D+       
Sbjct: 63  FAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDV------- 115
Query: 215 LFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             + N+  V +  + AT   L R++ G ++  SS+ G VG P   +Y
Sbjct: 116 -IDTNLKGVFNCIQKATPQML-RQRSGAIINLSSVVGAVGNPGQANY 160

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 139 RAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR 198
           R A  DI LE  R        P+   + LDVT      RC   ++ ++G +DIL+NNA  
Sbjct: 31  RVAIADINLEAARATAAE-IGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAAL 89
Query: 199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS 258
              A   +I  E    LF +NV   L + +      +A  +GG ++  +S AG  G    
Sbjct: 90  FDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALV 149
Query: 259 GSY 261
           G Y
Sbjct: 150 GVY 152

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL--- 105
           V+ITGAS GIG+A+AL+ +K GA +V++A+++    ++      A    +++    L   
Sbjct: 48  VFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI 107
Query: 106 -DVTQTKYHRRCFDAVIQQFGCLDILINNA 134
            DV   +      +  I++FG +DIL+NNA
Sbjct: 108 VDVRDEQQISAAVEKAIKKFGGIDILVNNA 137

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARS-----SSNLERVKNLCVQAGAHPQSIY 101
           KVV ITG+S+G+G+++A++ +   AK+V++ RS     +S LE +K +  +A A      
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA------ 61
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            +  DVT          + I++FG LD++INNAG
Sbjct: 62  -VKGDVTVESDVINLVQSAIKEFGKLDVMINNAG 94

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARS-----SSNLERVKNLCVQAGAHPQSIY 101
           KVV ITG+S+G+G+++A++ +   AK+V++ RS     +S LE +K +  +A A      
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA------ 61
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            +  DVT          + I++FG LD++INNAG
Sbjct: 62  -VKGDVTVESDVINLVQSAIKEFGKLDVMINNAG 94

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARS-----SSNLERVKNLCVQAGAHPQSIY 101
           KVV ITG+S+G+G+++A++ +   AK+V++ RS     +S LE +K +  +A A      
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA------ 61
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            +  DVT          + I++FG LD++INNAG
Sbjct: 62  -VKGDVTVESDVINLVQSAIKEFGKLDVMINNAG 94

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 13/97 (13%)
Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           + +  + V +TG SSGIG A+A+Q ++ GA++V     +          V A  HP+ I 
Sbjct: 7   DIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADG--------VHAPRHPR-IR 57
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ 138
              LD+T ++  +R F+A+ +    LD+L+NNAG S+
Sbjct: 58  REELDITDSQRLQRLFEALPR----LDVLVNNAGISR 90

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 3   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 60
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 61  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 94

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 28  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 85
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 86  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 119

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 11  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 68
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 69  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 102

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 18  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 75
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 76  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 109

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 9   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 66
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 67  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 100

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 28  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 85
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 86  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 119

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 65
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 66  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 99

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 22  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 79
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 80  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 113

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +++V  +TGA+SGIG  +A +L K G ++ + AR    L        +AG         T
Sbjct: 5   DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG---RT 61
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 149
            DV           AV++++G +D+L+NNAGR    A  ++  E+
Sbjct: 62  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL 106

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
           T DV           AV++++G +D+L+NNAGR    A  ++  E+  ++ E N+  V  
Sbjct: 61  TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFR 120
Query: 226 LSRIATSYFLAREQG-GHLVVTSSIAGIVG----APYSGS 260
           +++         E+G G +V  +S  G  G    APYS S
Sbjct: 121 VTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS 160

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 22  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 79
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 80  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 113

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 65
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +  +      +  G LD+LI N
Sbjct: 66  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN 99

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +++V  +TGA+SGIG  +A +L K G ++ + AR    L        +AG         T
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG---RT 81
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 149
            DV           AV++++G +D+L+NNAGR    A  ++  E+
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL 126

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
           T DV           AV++++G +D+L+NNAGR    A  ++  E+  ++ E N+  V  
Sbjct: 81  TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFR 140
Query: 226 LSRIATSYFLAREQG-GHLVVTSSIAGIVG----APYSGS 260
           +++         E+G G +V  +S  G  G    APYS S
Sbjct: 141 VTKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSAS 180

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F NKV  +TG+  GIG+A A  L++ GA +V++  ++   E V    V  G    S+   
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISV--- 63
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
            +DV+  +  +   D  + +FG +D L+NNA
Sbjct: 64  AVDVSDPESAKAMADRTLAEFGGIDYLVNNA 94

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +++V  +TGA+SGIG  +A +L K G ++ + AR    L        +AG         T
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG---RT 81
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 149
            DV           AV++++G +D+L+NNAGR    A  ++  E+
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL 126

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
           T DV           AV++++G +D+L+NNAGR    A  ++  E+  ++ E N+  V  
Sbjct: 81  TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFR 140
Query: 226 LSRIATSYFLAREQG-GHLVVTSSIAGIVG----APYSGS 260
           +++         E+G G +V  +S  G  G    APYS S
Sbjct: 141 VTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS 180

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +++V  +TGA+SGIG  +A +L K G ++ + AR    L        +AG         T
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG---RT 77
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 149
            DV           AV++++G +D+L+NNAGR    A  ++  E+
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL 122

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
           T DV           AV++++G +D+L+NNAGR    A  ++  E+  ++ E N+  V  
Sbjct: 77  TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFR 136
Query: 226 LSRIATSYFLAREQG-GHLVVTSSIAGIVG----APYSGS 260
           +++         E+G G +V  +S  G  G    APYS S
Sbjct: 137 VTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS 176

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +++V  +TGA+SGIG  +A +L K G ++ + AR    L        +AG         T
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG---RT 81
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 149
            DV           AV++++G +D+L+NNAGR    A  ++  E+
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL 126

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
           T DV           AV++++G +D+L+NNAGR    A  ++  E+  ++ E N+  V  
Sbjct: 81  TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFR 140
Query: 226 LSRIATSYFLAREQG-GHLVVTSSIAGIVG----APYSGS 260
           +++         E+G G +V  +S  G  G    APYS S
Sbjct: 141 VTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS 180

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +++V  +TGA+SGIG  +A +L K G ++ + AR    L        +AG         T
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG---RT 81
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 149
            DV           AV++++G +D+L+NNAGR    A  ++  E+
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL 126

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
           T DV           AV++++G +D+L+NNAGR    A  ++  E+  ++ E N+  V  
Sbjct: 81  TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFR 140
Query: 226 LSRIATSYFLAREQG-GHLVVTSSIAGIVG----APYSGS 260
           +++         E+G G +V  +S  G  G    APYS S
Sbjct: 141 VTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS 180

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 23/182 (12%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F ++ V +TG + GIG A+A +L+  G K+ ++ R S                P+ ++ +
Sbjct: 33  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS--------------GAPKGLFGV 78
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-----QRAAWEDIELEVDRELFTYAY 158
            +DVT +    R F AV +  G +++L++NAG S      R   E  E  ++  L T A+
Sbjct: 79  EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANL-TGAF 137
Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
           R +    +  + + K+ R  F A +     +    N A  + +A    +   + REL + 
Sbjct: 138 RVA-QRASRSMQRNKFGRMIFIASVSGLWGIGNQANYA--ASKAGVIGMARSIARELSKA 194
Query: 219 NV 220
           NV
Sbjct: 195 NV 196

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           + V  ITGA SGIG A AL L+  G  +    R+ + +E V +  V AG   Q+I  L  
Sbjct: 28  SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG--QAI-ALEA 84
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DV+     R     ++ +FG LDI++ NAG
Sbjct: 85  DVSDELQXRNAVRDLVLKFGHLDIVVANAG 114

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYT 102
            + KV  ITG+SSGIG A+A   +K GA +VL AR    L E  ++L  + G     +  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR---VLE 61
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           + +DV   +      ++V   FG  DIL+NNAG
Sbjct: 62  VAVDVATPEGVDAVVESVRSSFGGADILVNNAG 94

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYT 102
            + KV  ITG+SSGIG A+A   +K GA +VL AR    L E  ++L  + G     +  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR---VLE 61
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           + +DV   +      ++V   FG  DIL+NNAG
Sbjct: 62  VAVDVATPEGVDAVVESVRSSFGGADILVNNAG 94

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 35  EKINKRLNY-FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQA 93
           E   +++ +  + + V +TG + GIG  +A   ++ GA + ++ARS   L  V     + 
Sbjct: 29  EPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL 88
Query: 94  GAHPQSIYTLTLDVTQTKYHRRCFDA---VIQQFGCLDILINNAGRSQRAAWEDIELEVD 150
           GA   ++  + LDV+       C DA   V+  FG LD++  NAG    A  + +  E  
Sbjct: 89  GAG--NVIGVRLDVSDPG---SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQL 143
Query: 151 RELFTYAYRPSIYTL 165
            E+     + ++YT+
Sbjct: 144 SEVLDVNVKGTVYTV 158

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           FN KV  +TGA   IG A AL+L++ G  + L   +   LE+ +    + G   +S    
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS---Y 61
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DVT  +      D+V++ FG +D L NNAG
Sbjct: 62  VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAG 93

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +++V  +TGA+SGIG  +A +L K G ++ + AR    L        +AG         T
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG---RT 81
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGR 136
            DV           AV++++G +D+L+NNAGR
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGR 113

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +++V  +TGA+SGIG  +A +L K G ++ + AR    L        +AG         T
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG---RT 77
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGR 136
            DV           AV++++G +D+L+NNAGR
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGR 109

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +KVV I+G    +G  LA + ++ GA LVL+AR+   LE V       G    S+ T 
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGT- 67
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR 136
             D+T         D  ++ +G +D++INNA R
Sbjct: 68  --DITDDAQVAHLVDETMKAYGRVDVVINNAFR 98

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           N  + KV  ITG + GIG A+A +  + GAK++++ R S   E+      ++   P  I 
Sbjct: 2   NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEK----AAKSVGTPDQIQ 57
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               D +      + FDA  + FG +  L+NNAG
Sbjct: 58  FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAG 91

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 177 RCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLA 236
           + FDA  + FG +  L+NNAG +   + E+      R+L  +N+  V   +R+       
Sbjct: 71  KLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKN 130
Query: 237 REQGGHLVVTSSIAGIVGAPYSGSY 261
           +  G  ++  SSI G VG P  G+Y
Sbjct: 131 KGLGASIINMSSIEGFVGDPSLGAY 155

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           +  ++ITGA+SG GEA A + ++ G  LVL+ R     ER++ L  +  A  + +  LTL
Sbjct: 21  SSTLFITGATSGFGEACARRFAEAGWSLVLTGRRE---ERLQALAGELSAKTR-VLPLTL 76
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DV          D + ++F  L  LINNAG
Sbjct: 77  DVRDRAAXSAAVDNLPEEFATLRGLINNAG 106

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 176 RRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFL 235
           R+  D  +   G LDI++ NAG +   AW+DI  E  R++ ++NV    +         +
Sbjct: 89  RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRII 148
Query: 236 AREQGGHLVVTSSIAGIVGAPYSGSYT 262
              +GG +++ SS AG+   P+   YT
Sbjct: 149 EGGRGGSIILISSAAGMKMQPFMIHYT 175

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 31  LFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLC 90
           L+F   + KR      ++V ITGA  GIG   A + +K  +KLVL   +   LE     C
Sbjct: 16  LYFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC 75
Query: 91  VQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG---RSQRAAWEDIEL 147
              GA    ++T  +D +  +        V  + G + IL+NNAG    S   A +D ++
Sbjct: 76  KGLGA---KVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQI 132
Query: 148 EVDRELFTYAY 158
           E   E+   A+
Sbjct: 133 EKTFEVNVLAH 143

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TGA  GIG+A+AL+L K G  + ++  + +  + V +   QAG H  ++    +D
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAV---KVD 59
Query: 107 VTQTKYHRRCFDAVIQ---QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
           V+      + F AV Q     G  D+++NNAG +     E I  E+  +++    +  I+
Sbjct: 60  VSD---RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIW 116
Query: 164 TL 165
            +
Sbjct: 117 GI 118

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 177 RCFDAVIQQ---FGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSY 233
           + F AV Q     G  D+++NNAG +     E I  E+  +++ +NV  V+   + A   
Sbjct: 65  QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA 124
Query: 234 FLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           F     GG ++   S AG VG P    Y+
Sbjct: 125 FKKEGHGGKIINACSQAGHVGNPELAVYS 153

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V   C++ GA   S
Sbjct: 3   RPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGA--AS 60
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +            G LD+LI N
Sbjct: 61  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILN 94

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V   C++ GA   S
Sbjct: 26  RPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGA--AS 83
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +            G LD+LI N
Sbjct: 84  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILN 117

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F ++ V +TG + GIG A+A +L+  G K+ ++ R S                P+ ++ +
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS--------------GAPKGLFGV 58
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-----QRAAWEDIELEVDRELFTYAY 158
            +DVT +    R F AV +  G +++L++NAG S      R   E  E  ++  L T A+
Sbjct: 59  EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANL-TGAF 117
Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
           R +    +  + + K+ R  F   +     +    N A  + +A    +   + REL + 
Sbjct: 118 RVA-QRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYA--ASKAGVIGMARSIARELSKA 174
Query: 219 NV 220
           NV
Sbjct: 175 NV 176

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V   C++ GA   S
Sbjct: 5   RPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGA--AS 62
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +            G LD+LI N
Sbjct: 63  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILN 96

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           N  + KV  ITG + GIG A+A +  + GAK++++ R S   E+      ++   P  I 
Sbjct: 2   NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEK----AAKSVGTPDQIQ 57
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               D +      + FDA  + FG +  L+NNAG
Sbjct: 58  FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAG 91

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 177 RCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLA 236
           + FDA  + FG +  L+NNAG +   + E+      R+L  +N+  V   +R+       
Sbjct: 71  KLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKN 130
Query: 237 REQGGHLVVTSSIAGIVGAPYSGSY 261
           +  G  ++  SSI G VG P  G+Y
Sbjct: 131 KGLGASIINMSSIEGFVGDPSLGAY 155

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V   C++ GA   S
Sbjct: 5   RPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGA--AS 62
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
            + +   +    +            G LD+LI N
Sbjct: 63  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILN 96

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +KVV ITG S+G+G A+A++  +  AK+V++   +       K    +AG   Q+I  + 
Sbjct: 15  DKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGG--QAI-IVQ 71
Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            DVT+ +         I++FG LD++INNAG        ++ L+
Sbjct: 72  GDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD 115

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DVT+ +         I++FG LD++INNAG        ++ L+   ++ + N+      S
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGS 132
Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAP 256
           R A  YF+  +  G+++  SS+  ++  P
Sbjct: 133 REAIKYFVENDIKGNVINMSSVHEMIPWP 161

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLS-----ARSSSNLERVKNLCVQAGAHPQS 99
           + K++ ITGASSG G   A  L+  G ++  S      R++SN+E +             
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDNDV---D 60
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           + TL LDV       R  D +I + G +D+LI+NAG
Sbjct: 61  LRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAG 96

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
           TL LDV       R  D +I + G +D+LI+NAG       E    E   EL+++NV S 
Sbjct: 63  TLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPEQFAELYDINVLST 122
Query: 224 LSLSRIATSYFLAREQG 240
             ++R A  +   ++ G
Sbjct: 123 QRVNRAALPHXRRQKHG 139

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
             +KVV ITG S+G+G A+A++  +  AK+V++   +       K    +AG   Q+I  
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGG--QAI-I 69
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           +  DVT+ +         I++FG LD++INNAG        ++ L+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD 115

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DVT+ +         I++FG LD++INNAG        ++ L+   ++ + N+      S
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGS 132
Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAP 256
           R A  YF+  +  G+++  SS+  ++  P
Sbjct: 133 REAIKYFVENDIKGNVINMSSVHEMIPWP 161

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
             +KVV ITG S+G+G A+A++  +  AK+V++   +       K    +AG   Q+I  
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGG--QAI-I 69
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           +  DVT+ +         I++FG LD++INNAG        ++ L+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD 115

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DVT+ +         I++FG LD++INNAG        ++ L+   ++ + N+      S
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGS 132
Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAP 256
           R A  YF+  +  G+++  SS+  ++  P
Sbjct: 133 REAIKYFVENDIKGNVINMSSVHEMIPWP 161

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR---SQRAAWEDIELEVDRELF 216
           P    +  DVTQ    +      I++FG LD ++NNAG     QR   E+   +  R+L 
Sbjct: 54  PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRP--EETSAQGFRQLL 111
Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG 254
           ELN+    +L+++A  Y   R+  G+++  SS+ G +G
Sbjct: 112 ELNLLGTYTLTKLALPYL--RKSQGNVINISSLVGAIG 147

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSA--------RSSSNLERVKNLCVQAGA 95
              K   +TG++SGIG A+A +L+K GA +V++         R  S LE      V+A  
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLE--SKFGVKA-- 57
Query: 96  HPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
                Y L  D++  +  R       +  G LDIL+NNAG    A  E  E  VD+
Sbjct: 58  -----YYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIE--EFPVDK 106

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG 187
           D++IN  G+      EDIE E  R      +    Y L  D++  +  R       +  G
Sbjct: 30  DVVINGFGQP-----EDIERE--RSTLESKFGVKAYYLNADLSDAQATRDFIAKAAEALG 82
Query: 188 CLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG-GHLVVT 246
            LDIL+NNAG    A  E+  ++    +  LN+ +V   +  A +  + ++QG G ++  
Sbjct: 83  GLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGT--AAALPIMQKQGWGRIINI 140
Query: 247 SSIAGIVGAPYSGSY 261
           +S  G+V +    +Y
Sbjct: 141 ASAHGLVASVNKSAY 155

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS--ARSSSNLERVKNLCVQAGAHPQSIY 101
              K   +TG++SGIG  +A  L++ GA +VL+     +  L  +    V+A  HP  + 
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS 61
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
               DV Q +     F    ++FG +DIL+NNAG    A  E   LE
Sbjct: 62  ----DVAQIEA---LFALAEREFGGVDILVNNAGIQHVAPVEQFPLE 101

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 148 EVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 207
           E+ R      + P+  +   DV Q +     F    ++FG +DIL+NNAG    A  E  
Sbjct: 45  EIARHGVKAVHHPADLS---DVAQIEA---LFALAEREFGGVDILVNNAGIQHVAPVEQF 98
Query: 208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            LE   ++  LN+ +V   +R+A     AR   G ++  +S+ G+VG+    +Y
Sbjct: 99  PLESWDKIIALNLSAVFHGTRLALPGMRARNW-GRIINIASVHGLVGSTGKAAY 151

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            N +V  +TGAS GIG  +ALQL K GA + ++ R   +L+ ++ +  +A +       +
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGR---HLDTLRVVAQEAQSLGGQCVPV 59
Query: 104 TLDVTQTKYHRRCFDAV-IQQFGCLDILINNA 134
             D +Q    R  F+ V  +Q G LD+L+NNA
Sbjct: 60  VCDSSQESEVRSLFEQVDREQQGRLDVLVNNA 91

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 39  KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHP 97
            + +   N+++ +TGAS GIG   AL  ++ GA ++L  R+   L RV +++  +    P
Sbjct: 7   PKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQP 66
Query: 98  QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           Q  +TL L     +  R+  D +   +  LD +++NAG
Sbjct: 67  Q-WFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAG 103

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           N    KVV ITG SSG G+  A + +K GA++V++ R+   LE  K   ++    P  I 
Sbjct: 2   NAXKEKVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAK---LEIEQFPGQIL 58
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
           T+  DV  T   ++  + + ++FG +DILINNA
Sbjct: 59  TVQXDVRNTDDIQKXIEQIDEKFGRIDILINNA 91

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 32/165 (19%)
Query: 38  NKRLNYF---NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG 94
           NK+ NY+    NKV  +TGA  GIG  +A  L+K  + ++  +R+  + + V +  +++ 
Sbjct: 33  NKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDE-IKSF 91
Query: 95  AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIE 146
            +  S Y    DV++ +      + ++ +   +DIL+NNAG        R +   WED+ 
Sbjct: 92  GYESSGY--AGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDV- 148
Query: 147 LEVDRELFTYAYRP-----------------SIYTLTLDVTQTKY 174
           L  +     Y  +P                 SI  LT +V Q  Y
Sbjct: 149 LRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANY 193

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 39  KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHP 97
            + +   N+++ +TGAS GIG   AL  ++ GA ++L  R+   L RV +++  +    P
Sbjct: 8   PKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQP 67
Query: 98  QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           Q  +TL L     +  R+  D +   +  LD +++NAG
Sbjct: 68  Q-WFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAG 104

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 17/93 (18%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K+V ITGASSGIGEA+A + S+ G  L+L AR    +ER+K L +     P ++    +D
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLAR---RVERLKALNL-----PNTLCA-QVD 67
Query: 107 VTQTKYHRRCFDAVIQQ----FGCLDILINNAG 135
           VT  KY    FD  I +    +G  D ++NNAG
Sbjct: 68  VTD-KY---TFDTAITRAEKIYGPADAIVNNAG 96

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            +V  +TG S G+G  +A  L++ G  +V+++R   NLE       Q       + T+  
Sbjct: 21  GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR---NLEEASE-AAQKLTEKYGVETMAF 76
Query: 106 --DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
             DV+  +  ++  +AV ++FG LD ++N AG ++R   E+  L+  R++ 
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVI 127

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 154 FTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 213
            T  Y         DV+  +  ++  +AV ++FG LD ++N AG ++R   E+  L+  R
Sbjct: 65  LTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFR 124
Query: 214 ELFELNVFSVLSLSRIATS 232
           ++ E+N+F    + R A S
Sbjct: 125 QVIEVNLFGTYYVCREAFS 143

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYT 102
              K   +TG+++GIG+A+A  L   GA ++++ R   N+ E +K +  Q   +P +I  
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQ---YPDAI-- 62
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           L   V      + C D VI+++  +DILINN G  +   + DI  E
Sbjct: 63  LQPVVADLGTEQGCQD-VIEKYPKVDILINNLGIFEPVEYFDIPDE 107

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLS-----ARSSSNLERVKNLCVQAGAHPQSIY 101
           KV  +TGAS GIG A+A+ L+K GA +V++      +++  ++ +K L   A        
Sbjct: 5   KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDA-------I 57
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ 138
            +  DV   +         +  FG +DIL+NNAG ++
Sbjct: 58  AVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTK 94

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  ITGASSGIGEA A  L+  GA + ++AR    L  + +    AGA    ++ L
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA---KVHVL 61
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            LDV   +       + ++  G LDIL+NNAG
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAG 93

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           L  +VT  ++      A + QFG + +L+NNAG      + D+ +      F+LN+FS+ 
Sbjct: 66  LECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLF 124
Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAG 251
            LS++A  + + +  GG ++  SS+AG
Sbjct: 125 RLSQLAAPH-MQKAGGGAILNISSMAG 150

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 43  YFNN---KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           YF +   K   ITG++SGIG A+A  L+K GA +VL+   + +  R     V AG    +
Sbjct: 19  YFQSXXTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEV-AGLSSGT 77
Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           +     D T+          V  +FG  DIL+NNAG       ED  +E
Sbjct: 78  VLHHPADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVE 126

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F ++ V +TG + GIG A+A +L+  G K+ ++ R S                P+ ++ +
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS--------------GAPKGLFGV 58
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-----QRAAWEDIELEVDRELFTYAY 158
             DVT +    R F AV +  G +++L++NAG S      R   E  E  ++  L T A+
Sbjct: 59  ECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANL-TGAF 117
Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
           R +    +  + + K+ R  F   +     +    N A  + +A    +   + REL + 
Sbjct: 118 RVA-QRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYA--ASKAGVIGMARSIARELSKA 174
Query: 219 NV 220
           NV
Sbjct: 175 NV 176

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA-AWEDIELEVDRELFELNV 220
           I T  +DV   +  +   D+ ++Q G LDI++ NAG          I   V +++ ++N+
Sbjct: 78  IVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDINL 137
Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             V    +    + L+  +GG +V+TSS+ G    P +G Y
Sbjct: 138 TGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHY 178

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  ITGASSGIGEA A  L+  GA + ++AR    L  + +    AGA    ++ L
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA---KVHVL 61
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            LDV   +       + ++  G LDIL+NNAG
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAG 93

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA-AWEDIELEVDRELFELNVFSV 223
           +  DVT     R  F A +++FG +D+L NNAG    A   ED+     +++ + N+   
Sbjct: 79  VPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGP 138
Query: 224 LSLSRIATSYFLARE-QGGHLVVTSSIAGIVGAPYSGSYT 262
              ++ A     A+E +GG ++   SI+     PYS  YT
Sbjct: 139 FLCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYT 178

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             NKV  ITGA  GIG   +  L++ GA++VL+    ++L        +   H       
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVH------H 62
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVD 150
            +D+T     R   D  I  FG LDI+ NNA  S  A     ++ VD
Sbjct: 63  VVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVD 109

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSVLS 225
           +DV      +   D  + Q G LDI++ NA   S+      ++ +  R++ ++N+     
Sbjct: 96  VDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWI 155
Query: 226 LSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            +R+A  + +A ++GG +V TSSI G+ GA   G+Y
Sbjct: 156 TARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNY 191

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            N KV  +TGAS GIG  +A  L+  GA +V +A S ++ E+ +N   + G   +    L
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARG---L 59
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            L+++  +  +  F  +  +   +DIL+NNAG
Sbjct: 60  VLNISDIESIQNFFAEIKAENLAIDILVNNAG 91

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS---------ARSSSNLERVKNLCVQAG 94
           F +KVV ITGA  G+G+  +L+ +K GAK+V++           +S   + V +  V+ G
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65
Query: 95  AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               + Y   LD        +  +  ++ FG + ++INNAG
Sbjct: 66  GVAVADYNNVLD------GDKIVETAVKNFGTVHVIINNAG 100

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 17/81 (20%)
Query: 182 VIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSY 233
           VI ++G +DIL+NNAG        +  +  W+ ++        ++++    +LSR+A  Y
Sbjct: 389 VIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQ--------QVHLIGTFNLSRLAWPY 440
Query: 234 FLAREQGGHLVVTSSIAGIVG 254
           F+ + Q G ++  +S +GI G
Sbjct: 441 FVEK-QFGRIINITSTSGIYG 460

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 39  KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
           KRL     K   ITG++ GIG A A    + GA + ++     ++ER +    + G    
Sbjct: 4   KRLE---GKSALITGSARGIGRAFAEAYVREGATVAIA---DIDIERARQAAAEIG---P 54
Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY 158
           + Y +  DVT+         A ++  G LDIL+NNA     A   +I  E   +LF    
Sbjct: 55  AAYAVQXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINV 114
Query: 159 RPSIYTL 165
             +++TL
Sbjct: 115 AGTLFTL 121

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 141 AWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ 200
           A  DI++E  R+       P+ Y +  DVT+         A ++  G LDIL+NNA    
Sbjct: 36  AIADIDIERARQAAAE-IGPAAYAVQXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD 94
Query: 201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG 251
            A   +I  E   +LF +NV   L   + A    +A+ +GG ++  +S AG
Sbjct: 95  LAPIVEITRESYEKLFAINVAGTLFTLQAAARQXIAQGRGGKIINXASQAG 145

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI--- 100
            + K ++ITGAS GIG A+AL+ ++ GA + ++A+S+     V N  +    H  +    
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSA-----VANPKLPGTIHSAAAAVN 58
Query: 101 ------YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
                   L  D+ +    R    A +  FG +DIL+NNA
Sbjct: 59  AAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNA 98

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KVV ITGAS GIG  L         ++V ++RS           ++  A P  I+T+  D
Sbjct: 29  KVVVITGASQGIGAGLVRAYRDRNYRVVATSRS-----------IKPSADPD-IHTVAGD 76
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +++ +   R     I++FG +D L+NNAG
Sbjct: 77  ISKPETADRIVREGIERFGRIDSLVNNAG 105

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           +KV  +TG + GIG  ++ +L+  G  + ++       +  + + +   A  ++++ + L
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVF-VGL 60
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
           DVT         D   ++ G  D+L+NNAG +Q        LEV  E     Y  +++++
Sbjct: 61  DVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPL----LEVTEEDLKQIYSVNVFSV 116
Query: 166 TLDVTQTKYHRRCFD 180
              +   +   R FD
Sbjct: 117 FFGI---QAASRKFD 128

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF 186
            DI + +  + +  A E I+L         A + +++ + LDVT         D   ++ 
Sbjct: 27  FDIAVADLPQQEEQAAETIKL------IEAADQKAVF-VGLDVTDKANFDSAIDEAAEKL 79
Query: 187 GCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           G  D+L+NNAG +Q     ++  E  ++++ +NVFSV 
Sbjct: 80  GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVF 117

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 41  LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
           L  F  +  ++TG ++G+G  L  QL   G K+ ++     ++++        G+ P+ +
Sbjct: 3   LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPE-V 61
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             + LDV   +  +   D V  +FG + IL NNAG
Sbjct: 62  MGVQLDVASREGFKMAADEVEARFGPVSILCNNAG 96

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
           P +  + LDV   +  +   D V  +FG + IL NNAG +     E+   +    L  +N
Sbjct: 59  PEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVN 118
Query: 220 VFSVLS-----LSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           +  V++     + R+        ++GGH+V T+S+A  + A   G Y 
Sbjct: 119 LHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYN 166

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 46/100 (46%)
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
           + +  DVT        F  +  +   +DILINNAG   R    ++ELE  +++ + N+ S
Sbjct: 61  HGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTS 120
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
              +SR A    +AR  GG ++   S+      P    YT
Sbjct: 121 AFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT 160

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            K   +TGA+ GIG+A+A +L+  GA +++   S  N E  K      G   ++I     
Sbjct: 6   GKTALVTGAAQGIGKAIAARLAADGATVIV---SDINAEGAKAAAASIGKKARAIAA--- 59
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           D++     +  F  +    G +DIL+NNA      AW+D++L+  R++ 
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKII 108

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 46/97 (47%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           +  D++     +  F  +    G +DIL+NNA      AW+D++L+  R++ ++N+    
Sbjct: 57  IAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTF 116
Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            ++R  T    A  + G ++  +S     G P   +Y
Sbjct: 117 IVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAY 153

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN-LCVQAGAHPQSIYT 102
            + K   ITGA+ GIG  +A   +  GA+LVLS R  S L+  +  L  Q G     ++T
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG---TDVHT 74
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           + +D+ +            + FG LD+L+NNAG S      D     D +LF
Sbjct: 75  VAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVD----TDPQLF 122

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 46/100 (46%)
Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
           + + +DVT+           I   G  D+L  NAG S      DI  E     F++N   
Sbjct: 61  FAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARG 120
Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           V   ++IA  +FLA    G +V T+S+A  VGAP    Y+
Sbjct: 121 VFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYS 160

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            K   +TGA+ GIG+A+A +L+  GA +++   S  N E  K      G   ++I     
Sbjct: 6   GKTALVTGAAQGIGKAIAARLAADGATVIV---SDINAEGAKAAAASIGKKARAIAA--- 59
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           D++     +  F  +    G +DIL+NNA      AW+D++L+  R++ 
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKII 108

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 46/97 (47%)
Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           +  D++     +  F  +    G +DIL+NNA      AW+D++L+  R++ ++N+    
Sbjct: 57  IAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTF 116
Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            ++R  T    A  + G ++  +S     G P   +Y
Sbjct: 117 IVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAY 153

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K   ITGASSGIG A+A  L K G+K+++S    SN E++K+L    G   +  Y  T++
Sbjct: 15  KTSLITGASSGIGSAIARLLHKLGSKVIISG---SNEEKLKSL----GNALKDNY--TIE 65
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           V        C + +I +   LDIL+ NAG
Sbjct: 66  VCNLANKEECSN-LISKTSNLDILVCNAG 93

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 41  LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
           L+ F+ +   +TG +SGIG A A + ++ GA+LVLS      LE+  N     G      
Sbjct: 26  LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF---DA 82
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           + +  DV       R  D   +  G +D++ +NAG
Sbjct: 83  HGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAG 117

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + K   ITGA +GIG+ +A+  +  GA +V+S  ++     V +   Q G      +  
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---AFAC 65
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             D+T  +      D  I + G +DIL+NNAG
Sbjct: 66  RCDITSEQELSALADFAISKLGKVDILVNNAG 97

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           D+T  +      D  I + G +DIL+NNAG      + D+ +   R  +ELNVFS   LS
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLS 126
Query: 228 RIATSYFLAREQGGHLVVTSSIA 250
           ++     + +  GG ++  +S+A
Sbjct: 127 QLVAPE-MEKNGGGVILTITSMA 148

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 19/120 (15%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +KVV +TGAS GIG A+A +    G+K++             +L +      +  + +
Sbjct: 13  LRDKVVIVTGASMGIGRAIAERFVDEGSKVI-------------DLSIHDPGEAKYDH-I 58
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE-----VDRELFTYAY 158
             DVT     +   D + +++G + +L+NNAG       E + +      +D  LF Y Y
Sbjct: 59  ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYY 118

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 19/120 (15%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +KVV +TGAS GIG A+A +    G+K++             +L +      +  + +
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVI-------------DLSIHDPGEAKYDH-I 51
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE-----VDRELFTYAY 158
             DVT     +   D + +++G + +L+NNAG       E + +      +D  LF Y Y
Sbjct: 52  ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYY 111

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQ-AGAHPQSI 100
           +   +KV +ITG  SGIG  +A    + G   V+++RS   L RV     + AGA  +  
Sbjct: 23  DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS---LPRVLTAARKLAGATGRRC 79
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
             L++DV          D  +++FG +DILIN A
Sbjct: 80  LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCA 113

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSS----NLERVKNLCVQAGAHPQSI 100
           NK   +TG+S G+G+A A++L++ G  +V++ ARS        E ++ L V+       +
Sbjct: 4   NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK-------V 56
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
             +  +V Q    +  F  + + FG LD+ +NNA
Sbjct: 57  LVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNA 90

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 41  LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
           +  F +KV  +TG SSGIG A+   L + GAK+V     S +L+   ++ V         
Sbjct: 9   MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVV-----SVSLDEKSDVNVSD------- 56
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
               +DVT  +  +   +   +++G +DIL+NNAG  Q +       E+ R + 
Sbjct: 57  -HFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRII 109

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 39  KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
           +R     NKV  +T ++ GIG A+A +L++ GA +V+S+R   N++R        G    
Sbjct: 7   ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL--- 63
Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
           S+      V + +   R     +   G +DIL++NA
Sbjct: 64  SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNA 99

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           K   +TG+S G+G+A+A +L   GA +VL+ + +S++L+        AG +   +     
Sbjct: 6   KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN---VVVAKG 62
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
           DV   +         +  FG +DIL+NNAG        +     W+D+
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDV 110

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT 110
           +TGA+ G+GEA+A  L   GA + L     +  E++K L  + G   + I+    +++  
Sbjct: 12  VTGATGGLGEAIARALHAQGAIVGLHG---TREEKLKELAAELG---ERIFVFPANLSDR 65
Query: 111 KYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVT 170
           +  +       ++ G +DIL+NNAG ++   +  +  E D +        S++ LT ++T
Sbjct: 66  EAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDE-DWDAVLTVNLTSVFNLTRELT 124
Query: 171 QTKYHRR 177
                RR
Sbjct: 125 HPMMRRR 131

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 184 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHL 243
           ++ G +DIL+NNAG ++   +  +  E    +  +N+ SV +L+R  T + + R + G +
Sbjct: 77  EEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELT-HPMMRRRNGRI 135
Query: 244 VVTSSIAGIVGAPYSGSY 261
           +  +SI G+ G P   +Y
Sbjct: 136 INITSIVGVTGNPGQANY 153

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
              KV  +TGA  GIG  +A++L + G K++++ A S+ + E V     + G+    +  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
              +V   +   R F+  ++ FG LDI+ +N+G       +D+  E    +FT   R
Sbjct: 87  ---NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTR 140

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
              KV  +TGA  GIG  +A++L + G K++++ A S+ + E V     + G+    +  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
              +V   +   R F+  ++ FG LDI+ +N+G       +D+  E    +FT   R
Sbjct: 87  ---NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTR 140

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT 110
           +TGA+ G+GEA+A  L   GA + L     +  E++K L  + G   + I+    +++  
Sbjct: 15  VTGATGGLGEAIARALHAQGAIVGLHG---TREEKLKELAAELG---ERIFVFPANLSDR 68
Query: 111 KYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVT 170
           +  +       ++ G +DIL+NNAG ++   +  +  E D +        S++ LT ++T
Sbjct: 69  EAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDE-DWDAVLTVNLTSVFNLTRELT 127
Query: 171 QTKYHRR 177
                RR
Sbjct: 128 HPMMRRR 134

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 23/105 (21%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R +   NKV  +T ++ GIG A+A +L++ GA +V+S+R   N++             Q+
Sbjct: 9   RRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVD-------------QA 55
Query: 100 IYTLT---LDVTQTKYH-------RRCFDAVIQQFGCLDILINNA 134
           + TL    L VT T  H        R     ++  G +DIL++NA
Sbjct: 56  VATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNA 100

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              +V  ITG +SG+G AL  +    GA++ +  +S+   ER++ L V   AH  +   +
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSA---ERLRELEV---AHGGNAVGV 56
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR-SQRAAWEDI-ELEVDR---ELFTYAY 158
             DV   +  +R  +  +  FG +D LI NAG      A  D+ E ++D    ++F    
Sbjct: 57  VGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNV 116
Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 197
           +  I+ +          + C  A++   G +   I+NAG
Sbjct: 117 KGYIHAV----------KACLPALVSSRGSVVFTISNAG 145

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            N +V  +TG  SGIG A A   +K GA +V++  +     RV N   + G+     + +
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVAN---EIGSKA---FGV 78
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            +DV+  K      +    ++G +D+L+NNAG
Sbjct: 79  RVDVSSAKDAESXVEKTTAKWGRVDVLVNNAG 110

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 20/108 (18%)
Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
            +  D+++       FD  +  FG LD +++N+G      W D ELEV +ELF+  VF++
Sbjct: 75  AIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME---VWCD-ELEVTQELFD-KVFNL 129
Query: 224 LSLSRIATSYFLARE------QGGHLVVTSSIAGIV-GAP----YSGS 260
            +  +    +F+A++      +GG +++TSSIA ++ G P    Y+GS
Sbjct: 130 NTRGQ----FFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGS 173

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 41  LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLS----------ARSSSNLERVKNLC 90
           +   + +VV +TGA  GIG A AL  +  GA++V++          A   S  + V +  
Sbjct: 22  MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEI 81
Query: 91  VQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             AG    +  +   D  Q           ++ FG LD+L+NNAG
Sbjct: 82  TAAGGEAVADGSNVADWDQAAG---LIQTAVETFGGLDVLVNNAG 123

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            +V ++TG   G+G A++ +L   G  + +S   S   + V    +      +      +
Sbjct: 25  KRVAFVTGGMGGLGAAISRRLHDAGMAVAVS--HSERNDHVSTWLMHERDAGRDFKAYAV 82
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW 142
           DV   +   RC + V+  FG +D+LINNAG ++ A +
Sbjct: 83  DVADFESCERCAEKVLADFGKVDVLINNAGITRDATF 119

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           V ITGAS GIGEA A  L   G ++ L AR    L+ +        A  +    L  DV 
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALA-------AELEGALPLPGDVR 60
Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAG 135
           +     R   A+ + FG L  L+NNAG
Sbjct: 61  EEGDWARAVAAMEEAFGELSALVNNAG 87

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-----LERVKNLCV----QAG 94
           ++ +V  +TGA +G+G   AL  ++ GAK+V++    ++      +R  ++ V    +AG
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG 76
Query: 95  AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               + Y   +D        +  +  I+ FG +DIL+NNAG
Sbjct: 77  GEAVADYNSVID------GAKVIETAIKAFGRVDILVNNAG 111

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSVLSL 226
           DV + +     F+ V  Q G L  L+NNAG   Q    + I LE  +  FE+NVF     
Sbjct: 83  DVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLC 142
Query: 227 SRIATSYFLAR--EQGGHLVVTSSIAGIVGAPYSGSYTDH 264
           +R A      R    GG +V  SS A  +G+P  G Y D+
Sbjct: 143 AREAVKRXSTRYGGSGGSIVNVSSAAARLGSP--GQYVDY 180

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLS--ARSSSNL-------ERVKNLC 90
           R+N    KV +ITGA+ G G   A++L++ GA +V     R   NL       E +K   
Sbjct: 40  RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETV 99
Query: 91  VQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA--------W 142
                  + I     DV      +   D  + +FG +DIL++N G S +          W
Sbjct: 100 RLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQW 159
Query: 143 EDI 145
            DI
Sbjct: 160 SDI 162

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 41/95 (43%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV      +   D  + +FG +DIL++N G S +     +  +   ++ + N+       
Sbjct: 115 DVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHAC 174
Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           R      + R QGG ++  SS  G+ GAP    Y 
Sbjct: 175 RAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYA 209

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQ-AGAHPQSIYTLTL 105
           KV  +TG++ GIG A+A +L+  G+ ++++  S    ER K +  + A  +    + + +
Sbjct: 8   KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSG---ERAKAVAEEIANKYGVKAHGVEM 64
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
           ++   +   + F+ +      +DIL+NNAG        R     WE++
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEV 112

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR-SSSNL-ERVKNLCVQAGAHPQSIY 101
              K V ITG+S GIG A A   ++ GAK+ L  R + +N+ E + ++    G       
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG----DAA 60
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               D+  ++  ++  D  + +FG +D+LINNAG
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAG 94

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 48  VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV 107
           +V +TGA++G GE +  +  + G K++ + R    L+ +K+   + G    ++Y   LDV
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD---ELG---DNLYIAQLDV 55
Query: 108 TQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVD 150
                      ++  ++  +DIL+NNAG       + +A+ ED E  +D
Sbjct: 56  RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMID 104

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DVT T+         +++ G LD+L+NNAG   +    D+  E    +  + + SV+  +
Sbjct: 81  DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRAT 140
Query: 228 RIATSYFLAREQGGHLVVTSSIAG 251
           R A  YF   + GG +V  +S+ G
Sbjct: 141 RAALRYFRGVDHGGVIVNNASVLG 164

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 43  YFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
           YF+   ++  +TG S GIG+ +A  L + GA++ + AR   + E   +   +  A+    
Sbjct: 24  YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICAR---DAEACADTATRLSAY-GDC 79
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED 144
             +  D++     RR   A+ +    LDIL+NNAG S  AA E 
Sbjct: 80  QAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALES 123

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYT 102
           F  K V ITGAS GIG  +A  L+  G K+ ++ RS++ + + +KN   + G     I  
Sbjct: 27  FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVI-- 84
Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
              D             ++Q  G L  L+NNAG
Sbjct: 85  -KFDAASESDFIEAIQTIVQSDGGLSYLVNNAG 116

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           +  ++TG SSGIG A+A  L+  G  +   AR + N+    +    AG     +   + D
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG---HDVDGSSCD 81
Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE 146
           VT T        A +++FG + IL+N+AGR+      D++
Sbjct: 82  VTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLD 121

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQ 98
           + +  N++++ +TGAS GIG   A+  ++ GA ++L  R+   L +V  ++  + G  PQ
Sbjct: 4   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 63
Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             + L L    ++  ++    ++  +  LD +++NAG
Sbjct: 64  -WFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAG 99

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 41  LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
           L  F  + V ITGA+SG+G   A +L++ GA ++++ R +   E        AG     +
Sbjct: 11  LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR--TMAG----QV 64
Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               LD+      RR  D V       D+LINNAG
Sbjct: 65  EVRELDLQDLSSVRRFADGV----SGADVLINNAG 95

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG-----AHPQ 98
              K ++I+G S GIG A+A +++  GA + L A+S+    ++      A      A  Q
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66
Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           ++  +  D+             ++QFG +DI +NNA      + E++ L+
Sbjct: 67  AL-PIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLK 115

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           ++ V +TG + GIG A+A   +  G K+ ++ RS              G  P+    +  
Sbjct: 21  SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRS--------------GEPPEGFLAVKC 66
Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           D+T T+   + +  + +  G +++LI NAG
Sbjct: 67  DITDTEQVEQAYKEIEETHGPVEVLIANAG 96

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSN----LERVKNLCVQAGAHPQSIYTLTLD 106
           +TG + GIG  +  QLS  G  +VL+ R  +     +E++KN      ++ +++    LD
Sbjct: 17  VTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKN------SNHENVVFHQLD 70
Query: 107 VTQTKYHRRCF-DAVIQQFGCLDILINNAG 135
           VT          D +   FG LDIL+NNAG
Sbjct: 71  VTDPIATMSSLADFIKTHFGKLDILVNNAG 100

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              + V ITG +SG+G AL  +    GAK+ +  +S+   ER+  L      H  ++  +
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSA---ERLAELETD---HGDNVLGI 56
Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV   +  ++     + +FG +D LI NAG
Sbjct: 57  VGDVRSLEDQKQAASRCVARFGKIDTLIPNAG 88

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Query: 136 RSQRAAWEDIELEVDRELFT---YAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDIL 192
           R  R A  D+  E   E      +AY   +  +  DV           A ++QFG +D+L
Sbjct: 25  RGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVL 84
Query: 193 INNA---GRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSI 249
           +NNA   G S+        +E   ++  +NV  +    R    + L  +  G +V  +S+
Sbjct: 85  VNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHML-LQGAGVIVNIASV 143
Query: 250 AGIVGAPYSGSYT 262
           A +V  P   +YT
Sbjct: 144 ASLVAFPGRSAYT 156

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
           LDVTQ    +   D  +  FG L +L+NNAG       ED  L   + + ++N+  V   
Sbjct: 60  LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 227 SRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSYT 262
            R        +E G G ++  SSI G+ G      YT
Sbjct: 120 IRAVVKPM--KEAGRGSIINISSIEGLAGTVACHGYT 154

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS--ARSSSNLERVKNLCVQAGAHPQSIY 101
             +K+  ITG ++GIG A+A + +  GA + ++    +      ++NL        + + 
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG-------RRVL 57
Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           T+  DV+Q          VI  FG  DIL+NNAG      ++++  E  ++ F
Sbjct: 58  TVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTF 110

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	265
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	9e-44
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-28
1xhl_A	297	Short-chain dehydrogenase/reductase family member	3e-31
1spx_A	278	Short-chain reductase family member (5L265); paral	4e-31
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	8e-31
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-30
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-28
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	7e-23
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	6e-28
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	8e-28
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	9e-28
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-27
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-17
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-27
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	4e-27
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	4e-26
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-16
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-26
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-25
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-14
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-25
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	4e-20
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	6e-25
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-10
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	6e-25
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	8e-25
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-12
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-25
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-22
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	9e-25
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-25
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-24
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-24
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-23
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-24
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-24
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	8e-13
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-24
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	4e-24
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	6e-24
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	6e-24
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-10
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	6e-24
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-23
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	5e-12
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-23
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-23
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-14
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-23
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-23
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-23
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	3e-23
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	4e-23
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-23
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	4e-23
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	5e-23
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-22
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-22
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-22
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-13
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-22
3imf_A	257	Short chain dehydrogenase; structural genomics, in	9e-10
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	1e-22
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	3e-12
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-22
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-22
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-22
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	5e-13
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-22
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	5e-11
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	5e-22
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-21
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	7e-22
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	6e-08
3cxt_A	291	Dehydrogenase with different specificities; rossma	7e-22
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	7e-22
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-21
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-21
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-21
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-21
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-10
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-21
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	7e-12
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-21
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-21
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	6e-15
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-21
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-16
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-21
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-21
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	3e-21
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	7e-11
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-21
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	4e-21
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	6e-11
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	5e-21
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-11
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	5e-21
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	5e-21
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	6e-21
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	6e-21
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	8e-21
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-11
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	9e-21
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	9e-21
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	6e-09
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-20
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-20
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-14
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-20
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-20
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-07
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-20
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-08
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-20
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	3e-20
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	4e-08
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	3e-20
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-06
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	3e-20
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-05
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	6e-20
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	6e-20
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	6e-20
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	6e-20
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-05
3rih_A	293	Short chain dehydrogenase or reductase; structural	7e-20
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-06
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-19
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-19
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-10
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-19
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-19
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-19
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-19
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-19
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	5e-15
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-19
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-13
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	2e-19
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	8e-06
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-19
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-19
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	3e-07
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-19
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-19
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-19
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-11
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-19
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-19
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	4e-19
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-19
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	4e-19
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	3e-05
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-19
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-09
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-19
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-10
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	5e-19
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	9e-13
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	5e-19
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	5e-19
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	5e-19
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	5e-19
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	5e-19
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	6e-19
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	6e-19
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-04
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	7e-19
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	7e-19
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-04
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	7e-19
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	8e-19
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-19
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	9e-19
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	5e-13
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-18
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	4e-10
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-18
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-18
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	9e-05
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-18
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	4e-13
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-18
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-18
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	3e-18
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-09
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-18
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-08
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-18
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-06
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	4e-18
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	4e-18
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	4e-11
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	5e-18
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	5e-18
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	5e-12
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	5e-18
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	6e-18
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	6e-18
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	5e-14
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	6e-18
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-06
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-17
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-17
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-06
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-17
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	7e-06
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-17
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	4e-17
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-09
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	4e-17
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	5e-17
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	3e-11
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	6e-17
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	6e-17
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	7e-17
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-17
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-11
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-16
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	9e-14
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-16
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-16
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	7e-16
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-16
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-16
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	3e-16
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	3e-10
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	3e-16
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-16
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	9e-11
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-16
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-11
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	5e-16
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-16
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	9e-06
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	6e-16
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	4e-11
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-15
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-11
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-15
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	4e-15
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	5e-15
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-07
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	6e-15
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-11
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	7e-15
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	8e-15
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	6e-14
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-13
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	6e-07
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	7e-13
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-11
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-12
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	6e-07
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-12
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-12
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-08
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-08
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-07
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-11
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-07
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-11
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	4e-05
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-11
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	7e-11
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-10
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	7e-11
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-05
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-10
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-10
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	8e-08
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-10
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	3e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	5e-05
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	7e-05
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	1e-04
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-04
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	3e-04
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	5e-04
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	6e-04
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	7e-04

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  148 bits (377), Expect = 9e-44
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 2/115 (1%)

Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 22  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--AS 79

Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
            + +   +    +  +      +  G LD+LI N   +        ++   R+  
Sbjct: 80  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM 134

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  108 bits (273), Expect = 2e-28
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 2/102 (1%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
            S + +   +    +  +      +  G LD+LI N   +        ++   R+  E+N
Sbjct: 78  ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVN 137

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             S + L+  A      ++  G +VV SS+AG V  P   +Y
Sbjct: 138 FLSYVVLTVAALPML--KQSNGSIVVVSSLAGKVAYPMVAAY 177

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  116 bits (292), Expect = 3e-31
 Identities = 47/221 (21%), Positives = 82/221 (37%), Gaps = 67/221 (30%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+ K V ITG+S+GIG + A+  +K GA++ ++ R+   LE  K   ++AG   + I  +
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELEVDRELFTYAYRPS 161
             DVT+        +  + +FG +DIL+NNAG   +   A  D  +E+            
Sbjct: 84  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVEL------------ 131

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
                            +    +                                 LN  
Sbjct: 132 -----------------YQKTFK---------------------------------LNFQ 141

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSI-AGIVGAPYSGSY 261
           +V+ +++    + +  +  G +V  SSI AG         Y
Sbjct: 142 AVIEMTQKTKEHLI--KTKGEIVNVSSIVAGPQAHSGYPYY 180

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  115 bits (291), Expect = 4e-31
 Identities = 52/220 (23%), Positives = 83/220 (37%), Gaps = 61/220 (27%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  KV  ITG+S+GIG A A+  ++ GAK+ ++ R +  LE  +   + AG   Q++ ++
Sbjct: 4   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DVT            + +FG LDIL+NNAG +   +          E           
Sbjct: 64  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIES---------- 113

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          +DA +                                  LN+ SV
Sbjct: 114 ---------------YDATLN---------------------------------LNLRSV 125

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIA-GIVGAPYSGSYT 262
           ++L++ A  +       G +V  SSIA G+   P    Y+
Sbjct: 126 IALTKKAVPHL--SSTKGEIVNISSIASGLHATPDFPYYS 163

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  114 bits (287), Expect = 8e-31
 Identities = 33/108 (30%), Positives = 52/108 (48%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
               +  ITGAS GIG  +A  L+  G ++VL ARS  NLE+V +  +++  H Q    L
Sbjct: 5   KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
            LD+T           + Q++G +DIL+N A      +  +      +
Sbjct: 65  PLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRK 112

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  114 bits (288), Expect = 1e-30
 Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 61/219 (27%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+NK V ITG+S+GIG   A+  ++ GA + ++ RSS  LE  + + +++G   + + ++
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DVT      +  ++ ++QFG +D+L+NNAG +   A+     +   ++          
Sbjct: 64  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDI---------- 113

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          +   ++                                 LN+ +V
Sbjct: 114 ---------------YHKTLK---------------------------------LNLQAV 125

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSI-AGIVGAPYSGSY 261
           + +++    +       G +V  SSI AG    P    Y
Sbjct: 126 IEMTKKVKPHL--VASKGEIVNVSSIVAGPQAQPDFLYY 162

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  106 bits (267), Expect = 4e-28
 Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           +   + +TGA SG+G AL + L + G ++ +  R    L++             ++  + 
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQ------ELLLGNAVIGIV 55

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
            D+   +     F A ++  G  +++++ AG  +         E  R + 
Sbjct: 56  ADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVM 105

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 92.6 bits (231), Expect = 7e-23
 Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 2/98 (2%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
            +  D+   +     F A ++  G  +++++ AG  +         E  R + E N+ S 
Sbjct: 53  GIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVST 112

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           + +++         E+GG L    S A  VG      Y
Sbjct: 113 ILVAQQTVRLI--GERGGVLANVLSSAAQVGKANESLY 148

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  106 bits (268), Expect = 6e-28
 Identities = 46/219 (21%), Positives = 68/219 (31%), Gaps = 66/219 (30%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +KVV I+G    +G  LA + ++ GA LVL+AR+   LE V       G    S+ T 
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGT- 67

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+T         D  ++ +G +D++INNA R                           
Sbjct: 68  --DITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMK-------------------PFA 106

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
             T +              I                                 EL VF  
Sbjct: 107 NTTFEH---------MRDAI---------------------------------ELTVFGA 124

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           L L +  T      E  G +V  +S+         G+Y 
Sbjct: 125 LRLIQGFTPAL--EESKGAVVNVNSMVVRHSQAKYGAYK 161

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  106 bits (266), Expect = 8e-28
 Identities = 31/218 (14%), Positives = 53/218 (24%), Gaps = 67/218 (30%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             N  V + GA   IG  +A + +  G  +    R+   L  +      AG     I   
Sbjct: 5   PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG---RIVAR 61

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
           +LD           +A       L++ I N G +      +    V              
Sbjct: 62  SLDARNEDEVTAFLNAA-DAHAPLEVTIFNVGANVNFPILETTDRV-------------- 106

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          F  V                                  E+  ++ 
Sbjct: 107 ---------------FRKVW---------------------------------EMACWAG 118

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
               R +    LA    G +  T + A + G     ++
Sbjct: 119 FVSGRESARLMLAH-GQGKIFFTGATASLRGGSGFAAF 155

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  106 bits (266), Expect = 9e-28
 Identities = 22/94 (23%), Positives = 47/94 (50%)

Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           +  N++++ +TGAS GIG   A+  ++ GA ++L  R+   L +V +   +        +
Sbjct: 8   DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWF 67

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            L L    ++  ++    +   +  LD +++NAG
Sbjct: 68  ILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAG 101

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  106 bits (267), Expect = 1e-27
 Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 3/124 (2%)

Query: 31  LFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLC 90
           L+F   + KR      ++V ITGA  GIG   A + +K  +KLVL   +   LE     C
Sbjct: 16  LYFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC 75

Query: 91  VQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVD 150
              GA    ++T  +D +  +        V  + G + IL+NNAG    +     +    
Sbjct: 76  KGLGA---KVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQI 132

Query: 151 RELF 154
            + F
Sbjct: 133 EKTF 136

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 79.2 bits (196), Expect = 1e-17
 Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 1/106 (0%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
                ++T  +D +  +        V  + G + IL+NNAG    +     +     + F
Sbjct: 77  GLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTF 136

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           E+NV +    ++            GH+V  +S AG V  P+  +Y 
Sbjct: 137 EVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGHVSVPFLLAYC 181

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  105 bits (265), Expect = 1e-27
 Identities = 30/92 (32%), Positives = 46/92 (50%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              +V+ +TGA+ GIG A A   +  GA +VL  R+ ++L  V +    AG     I  L
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            L+    + +R     V  +FG LD L++NA 
Sbjct: 72  NLENATAQQYRELAARVEHEFGRLDGLLHNAS 103

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  105 bits (264), Expect = 4e-27
 Identities = 43/219 (19%), Positives = 66/219 (30%), Gaps = 62/219 (28%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F ++   +TG  SGIG+ +A  L   GA +++  R+   L          GA+  +I   
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+T      R  DAV    G L  +++ AG S+                         
Sbjct: 69  PTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIG---------------------- 106

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                V                                 AW            +LNV   
Sbjct: 107 -PITQVDS------------------------------EAWRRT--------VDLNVNGT 127

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           + + + A    +    GG  V  SSIA      + G+Y 
Sbjct: 128 MYVLKHAAREMVRG-GGGSFVGISSIAASNTHRWFGAYG 165

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  101 bits (254), Expect = 4e-26
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KV  ITGAS GIGEA+A  L++ G  L L ARS   LE++ +  +Q       ++   L
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV--EVFYHHL 59

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           DV++ +        V+++FG +D+++ NAG       E++  E
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEE 102

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 75.3 bits (186), Expect = 2e-16
 Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 4/107 (3%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
                ++   LDV++ +        V+++FG +D+++ NAG       E++  E   E+ 
Sbjct: 49  EQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMI 108

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV---GAPYSGS 260
           E+N+  V    +           G  LV TS ++  +   G  Y  +
Sbjct: 109 EVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLIPYGGGYVST 154

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  101 bits (255), Expect = 4e-26
 Identities = 46/221 (20%), Positives = 73/221 (33%), Gaps = 70/221 (31%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              K+  +TGA SG+G A+A+ L+  G  + L+ R    L+        A         +
Sbjct: 26  TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQET------AAEIGDDALCV 79

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFTYAYRPSI 162
             DVT     R  F A +++FG +D+L NNAG    A   ED+                 
Sbjct: 80  PTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQ------------- 126

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
                           +  V+                                 + N+  
Sbjct: 127 ----------------WKQVV---------------------------------DTNLTG 137

Query: 223 VLSLSRIATSYFLARE-QGGHLVVTSSIAGIVGAPYSGSYT 262
               ++ A     A+E +GG ++   SI+     PYS  YT
Sbjct: 138 PFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYT 178

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  100 bits (251), Expect = 2e-25
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 1/111 (0%)

Query: 38  NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP 97
              +  + +++  +TGAS GIG A+A  L + G K+V  AR+  N+E +   C  AG +P
Sbjct: 24  RPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-YP 82

Query: 98  QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            ++     D++  +     F A+  Q   +DI INNAG ++          
Sbjct: 83  GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTS 133

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 1/114 (0%)

Query: 148 EVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 207
           E+  E  +  Y  ++     D++  +     F A+  Q   +DI INNAG ++       
Sbjct: 71  ELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSG 130

Query: 208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGS 260
                +++F +NV ++   +R A      R    GH++  +S++G    P S +
Sbjct: 131 STSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT 184

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 98.4 bits (246), Expect = 3e-25
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 14/106 (13%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           V ITGA+ G+G A A  L   G  L+LS R +  L     L  + GA       L  D+ 
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAE---LAREVGAR-----ALPADLA 52

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
                     A++++ G LD+L++  G++ RA+  +   ++  E+ 
Sbjct: 53  D----ELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEML 94

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 84.5 bits (210), Expect = 4e-20
 Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 11/99 (11%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
            L  D+           A++++ G LD+L++  G++ RA+  +   ++  E+   ++ + 
Sbjct: 46  ALPADLAD----ELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTA 101

Query: 224 LSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
             + +       AR Q     V   +    V  P   +Y
Sbjct: 102 AFVLK------HARFQKGARAVFFGAYPRYVQVPGFAAY 134

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 98.8 bits (247), Expect = 6e-25
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 3/98 (3%)

Query: 38  NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP 97
           +K ++  + +V  +TGAS GIG A+A +L   GA++VL+AR    L  V+   V AG   
Sbjct: 21  DKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-- 78

Query: 98  QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               +   D++ +         V+   G  D+L+NNAG
Sbjct: 79  -EAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAG 115

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 58.7 bits (143), Expect = 2e-10
 Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 22/109 (20%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG---------RSQRAAWEDIELEVDREL 215
              D++ +         V+   G  D+L+NNAG           + A W+ +        
Sbjct: 83  HACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDAL-------- 134

Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
             +N+ +   L R      +A  + GH++  SS+AG         Y+ S
Sbjct: 135 IAVNLKAPYLLLRAFAPAMIAA-KRGHIINISSLAGKNPVADGAAYTAS 182

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 98.8 bits (247), Expect = 6e-25
 Identities = 44/219 (20%), Positives = 75/219 (34%), Gaps = 64/219 (29%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + K   ITGA+ GIG  +A   +  GA+LVLS R  S L+  +    +       ++T+
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT--DVHTV 75

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            +D+ +            + FG LD+L+NNAG S      D + ++              
Sbjct: 76  AIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQL-------------- 121

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          FDA I                                  +N+ + 
Sbjct: 122 ---------------FDATI---------------------------------AVNLRAP 133

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             L+       +A  +GG ++  +S A +   P   +Y 
Sbjct: 134 ALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYC 172

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 98.0 bits (245), Expect = 8e-25
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             KV  ITGASSGIGEA A  L+  GA + ++AR    +E+++ L  +  A    ++ L 
Sbjct: 6   QGKVALITGASSGIGEATARALAAEGAAVAIAAR---RVEKLRALGDELTAAGAKVHVLE 62

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           LDV   +       + ++  G LDIL+NNAG
Sbjct: 63  LDVADRQGVDAAVASTVEALGGLDILVNNAG 93

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 64.1 bits (157), Expect = 2e-12
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 6/104 (5%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
            ++ L LDV   +       + ++  G LDIL+NNAG       ED +      + + N+
Sbjct: 57  KVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNL 116

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPYSGS 260
             ++ ++R A  +       G +V  SSIAG V     A Y  +
Sbjct: 117 LGLMYMTRAALPHL--LRSKGTVVQMSSIAGRVNVRNAAVYQAT 158

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 99.8 bits (249), Expect = 8e-25
 Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 2/112 (1%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARS--SSNLERVKNLCVQAGAHPQSIYT 102
           + K++ ITGASSG G   A  L+  G ++  S R     N   V+ +   A  +   + T
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           L LDV       R  D +I + G +D+LI+NAG       E    E   EL+
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELY 115

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 92.1 bits (229), Expect = 5e-22
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
                + TL LDV       R  D +I + G +D+LI+NAG       E    E   EL+
Sbjct: 56  DNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELY 115

Query: 217 ELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVG-APYSGSY 261
           ++NV S   ++R A  +   R Q  G L+  SS +   G  PY   Y
Sbjct: 116 DINVLSTQRVNRAALPHM--RRQKHGLLIWISSSSSAGGTPPYLAPY 160

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 97.9 bits (245), Expect = 9e-25
 Identities = 36/219 (16%), Positives = 66/219 (30%), Gaps = 73/219 (33%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              + V +TGA  GIG      L   GA++V  +R+ ++L+ +   C            +
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP-------V 57

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            +D+          +  +   G +D+L+NNA  +    + ++  E               
Sbjct: 58  CVDLGD----WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEA-------------- 99

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          FD                                    E+N+ +V
Sbjct: 100 ---------------FDRSF---------------------------------EVNLRAV 111

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           + +S+I     +AR   G +V  SS            Y 
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYC 150

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 98.8 bits (247), Expect = 9e-25
 Identities = 37/221 (16%), Positives = 68/221 (30%), Gaps = 66/221 (29%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              ++  +TG  +G+G  +A  LS  G  +V++ R    L+           +   +  +
Sbjct: 31  GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN--IVRAV 88

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDIELEVDRELFTYAYRPSI 162
             DV         F AV  +F  LD+L+NNAG +      E++  E              
Sbjct: 89  VCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQ------------- 135

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
                           ++ ++                                   N+  
Sbjct: 136 ----------------WNGIV---------------------------------AANLTG 146

Query: 223 VLSLSRIATSYFLARE-QGGHLVVTSSIAGIVGAPYSGSYT 262
               ++ A     A+  +GG ++   SI+     P S  YT
Sbjct: 147 AFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT 187

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 97.6 bits (244), Expect = 1e-24
 Identities = 38/219 (17%), Positives = 66/219 (30%), Gaps = 73/219 (33%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+     +TGA  GIG      L   GAK+V   R++S+L  +   C            +
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEP-------V 57

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            +D+          +  +   G +D+L+NNA       + ++  E               
Sbjct: 58  CVDLGD----WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEA-------------- 99

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          FD                                     +N+ SV
Sbjct: 100 ---------------FDRSF---------------------------------SVNLRSV 111

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             +S++     + R   G +V  SS+   V  P   +Y+
Sbjct: 112 FQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYS 150

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 98.5 bits (246), Expect = 1e-24
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 3/106 (2%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
           AY      ++LDVT  +        V+ ++G +D+L+NNAGR+Q  A+E+      R+LF
Sbjct: 48  AYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLF 107

Query: 217 ELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
           EL+VF    L+R        RE+G G +V  SS  G +      +Y
Sbjct: 108 ELHVFGPARLTRALLPQM--RERGSGSVVNISSFGGQLSFAGFSAY 151

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 95.8 bits (239), Expect = 1e-23
 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 6/110 (5%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           + KV  +TGASSG G A+A      G  ++ +AR     E + +L     A+P     ++
Sbjct: 4   SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTAR---RTEALDDL---VAAYPDRAEAIS 57

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           LDVT  +        V+ ++G +D+L+NNAGR+Q  A+E+      R+LF
Sbjct: 58  LDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLF 107

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 99.0 bits (247), Expect = 1e-24
 Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 1/109 (0%)

Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
            L  F  +  ++TG ++G+G  L  QL   G K+ ++     ++++        G+ P+ 
Sbjct: 2   SLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEV 61

Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           +  + LDV   +  +   D V  +FG + IL NNAG +     E+   +
Sbjct: 62  M-GVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYD 109

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 98.0 bits (245), Expect = 1e-24
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           +KV+ ITGAS GIGE +A +L   GAK++L AR  + +E +      AG    +     L
Sbjct: 4   DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG---TALAQVL 60

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DVT          A +  +G +D+L+NNAG
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAG 90

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 65.7 bits (161), Expect = 8e-13
 Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 5/104 (4%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
           +     LDVT          A +  +G +D+L+NNAG    +    ++++    + ++N+
Sbjct: 54  TALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNI 113

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPYSGS 260
             VL           A+ + G ++   SI  +      A Y  +
Sbjct: 114 KGVLWGIGAVLPIMEAQ-RSGQIINIGSIGALSVVPTAAVYCAT 156

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 96.5 bits (241), Expect = 3e-24
 Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 10/97 (10%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAK-------LVLSARSSSNLERVKNLCVQAGAHPQ 98
             ++ ITGA  GIG A+AL+ ++           LVLS+R++++LE++   C   GA   
Sbjct: 2   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA--- 58

Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
              T+T D++     RR    +++++G +D L+NNAG
Sbjct: 59  LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAG 95

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 96.4 bits (241), Expect = 4e-24
 Identities = 44/216 (20%), Positives = 71/216 (32%), Gaps = 65/216 (30%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           K   +TG++ G+G A A  L+  GA+++L+   ++ L    +   + G      + +  D
Sbjct: 10  KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG---YDAHGVAFD 66

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLT 166
           VT        F  +  +   +DILINNAG   R    ++ELE                  
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELEN----------------- 109

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
                       +  VI                                   N+ S   +
Sbjct: 110 ------------WQKVID---------------------------------TNLTSAFLV 124

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           SR A    +AR  GG ++   S+      P    YT
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT 160

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 96.1 bits (240), Expect = 6e-24
 Identities = 45/216 (20%), Positives = 71/216 (32%), Gaps = 65/216 (30%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            KV  +TGA  GIG+A+AL+L K G  + ++  + +  + V +   QAG        + +
Sbjct: 2   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG---HAVAVKV 58

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
           DV+         +   +  G  D+++NNAG +     E I  E+                
Sbjct: 59  DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEI---------------- 102

Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
                         D V                                   +NV  V+ 
Sbjct: 103 -------------VDKVY---------------------------------NINVKGVIW 116

Query: 226 LSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             + A   F     GG ++   S AG VG P    Y
Sbjct: 117 GIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVY 152

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 96.5 bits (241), Expect = 6e-24
 Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             + V  ITGA SGIG A AL L+  G  +    R+ + +E V +  V AG        L
Sbjct: 26  QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG---QAIAL 82

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV+     R     ++ +FG LDI++ NAG
Sbjct: 83  EADVSDELQMRNAVRDLVLKFGHLDIVVANAG 114

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 4/101 (3%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSV 223
           L  DV+     R     ++ +FG LDI++ NAG     A  +D++     E   +N+   
Sbjct: 82  LEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGT 141

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGI--VGAPYSGSYT 262
                +   Y   R  GG +VV SSI G      P + +YT
Sbjct: 142 FLTLHLTVPYLKQR-GGGAIVVVSSINGTRTFTTPGATAYT 181

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 96.1 bits (240), Expect = 6e-24
 Identities = 47/219 (21%), Positives = 69/219 (31%), Gaps = 63/219 (28%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F ++VV ITG  SG+G A A++L+  GAKL L   SS  LE  K   ++     + +   
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLT-T 69

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DV+          A  ++FG +D   NNAG   +                        
Sbjct: 70  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQN-------------------PTE 110

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
           + T            FD V+       I                           N+  V
Sbjct: 111 SFTAAE---------FDKVV------SI---------------------------NLRGV 128

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
                        +   G +V T+S+ GI G      Y 
Sbjct: 129 FLGLEKVLKIMREQ-GSGMVVNTASVGGIRGIGNQSGYA 166

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 95.3 bits (238), Expect = 1e-23
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             NKVV +TGA SGIG A+A + +   + +V        L ++       G     +  +
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK---EVLGV 61

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV++ K          + +  +D+L NNAG
Sbjct: 62  KADVSKKKDVEEFVRRTFETYSRIDVLCNNAG 93

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 63.3 bits (155), Expect = 5e-12
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 2/96 (2%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFELNVFSVLSL 226
           DV++ K          + +  +D+L NNAG         ++  E+   +  +N++S    
Sbjct: 64  DVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYS 123

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           SR      L +   G +V T+SIAGI G      YT
Sbjct: 124 SRAVIPIMLKQ-GKGVIVNTASIAGIRGGFAGAPYT 158

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 94.9 bits (237), Expect = 2e-23
 Identities = 47/222 (21%), Positives = 77/222 (34%), Gaps = 71/222 (31%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           + K   ITGAS+GIG+ +AL  ++ GA++ ++AR S  L+ V +     G        + 
Sbjct: 31  SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG---KALPIR 87

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
            DVTQ    R   D +  + G +DI + NAG     A  D+ LE                
Sbjct: 88  CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEE--------------- 132

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
                         F  +                                    NV  V 
Sbjct: 133 --------------FQRIQD---------------------------------TNVTGVF 145

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVG------APYSGS 260
             ++ A    + +  GG ++ T+S++G +       + Y  S
Sbjct: 146 LTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTS 187

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 94.1 bits (235), Expect = 2e-23
 Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 7/103 (6%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
              V ITGAS GIGEA A  L   G ++ L AR   + +R++ L  +          L  
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVGLMAR---DEKRLQALAAELEG----ALPLPG 57

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           DV +     R   A+ + FG L  L+NNAG        ++ LE
Sbjct: 58  DVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLE 100

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 70.2 bits (173), Expect = 1e-14
 Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 1/100 (1%)

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
             L  DV +     R   A+ + FG L  L+NNAG        ++ LE  R + + N+  
Sbjct: 53  LPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTG 112

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
                R A    L R  GG +V   S+AG        +Y 
Sbjct: 113 AFLGIRHAVPALLRR-GGGTIVNVGSLAGKNPFKGGAAYN 151

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 94.1 bits (235), Expect = 3e-23
 Identities = 43/218 (19%), Positives = 68/218 (31%), Gaps = 67/218 (30%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + K   ITGA +GIG+ +A+  +  GA +V+S  ++     V +   Q G      +  
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG---QAFAC 65

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+T  +      D  I + G +DIL+NNAG            ++              
Sbjct: 66  RCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKP-----FDMPMAD---------- 110

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          F                                     ELNVFS 
Sbjct: 111 ---------------FRRAY---------------------------------ELNVFSF 122

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             LS++          GG ++  +S+A         SY
Sbjct: 123 FHLSQLVAPEMEKN-GGGVILTITSMAAENKNINMTSY 159

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 94.5 bits (236), Expect = 3e-23
 Identities = 46/218 (21%), Positives = 68/218 (31%), Gaps = 68/218 (31%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + +   +TG S GIG A+A  L K GA + ++       + V       G      + +
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG------FAV 63

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            +DVT+           I   G  D+L  NAG S      DI  E               
Sbjct: 64  EVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEE-------------- 109

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          +D                                    ++N   V
Sbjct: 110 ---------------WDFNF---------------------------------DVNARGV 121

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
              ++IA  +FLA    G +V T+S+A  VGAP    Y
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHY 159

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 94.5 bits (236), Expect = 3e-23
 Identities = 38/218 (17%), Positives = 63/218 (28%), Gaps = 64/218 (29%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            +  V  +TG SSGIG A    L + GA +   AR    L   ++   Q     +     
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLF-AS 64

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DV      R   +A  +  GC  IL+NNAG+ + + + +   E               
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEA-------------- 110

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          +   +                                 +L  FSV
Sbjct: 111 ---------------WSEEL---------------------------------QLKFFSV 122

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +   R       +R     +V  +S+      P+  + 
Sbjct: 123 IHPVRAFLPQLESR-ADAAIVCVNSLLASQPEPHMVAT 159

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 94.1 bits (235), Expect = 3e-23
 Identities = 40/219 (18%), Positives = 66/219 (30%), Gaps = 70/219 (31%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYT 102
              K   ITG++ GIG A A    + GA + ++        +    +   A A       
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYA------- 58

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
           + +DVT+         A ++  G LDIL+NNA     A   +I  E              
Sbjct: 59  VQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRES------------- 105

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
                           ++ +                                   +NV  
Sbjct: 106 ----------------YEKLF---------------------------------AINVAG 116

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            L   + A    +A+ +GG ++  +S AG  G      Y
Sbjct: 117 TLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIY 155

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 94.2 bits (235), Expect = 4e-23
 Identities = 44/219 (20%), Positives = 80/219 (36%), Gaps = 52/219 (23%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              +V +ITGA+ G G A A++++  GA ++             ++  +  +        
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAV-----------DIAGKLPSCVPYDPAS 57

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+++T                   L+  A R                         I 
Sbjct: 58  PDDLSETVR-----------------LVEAANRR------------------------IV 76

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
              +D       R+  D  +   G LDI++ NAG +   AW+DI  E  R++ ++NV   
Sbjct: 77  AAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGT 136

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            +         +   +GG +++ SS AG+   P+   YT
Sbjct: 137 WNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYT 175

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 94.1 bits (235), Expect = 4e-23
 Identities = 46/220 (20%), Positives = 71/220 (32%), Gaps = 66/220 (30%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              K+  +TGASSGIG A AL  ++ GAK+V++AR+ + L  + +     G        L
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG---EAAAL 62

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DV     H    +  +++FG LD   NNAG                          I 
Sbjct: 63  AGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMG-------------------EIS 103

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
           +L+++          +   +                                 + N+ S 
Sbjct: 104 SLSVEG---------WRETL---------------------------------DTNLTSA 121

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAG-IVGAPYSGSYT 262
              ++       A   GG L  TSS  G   G      Y 
Sbjct: 122 FLAAKYQVPAIAAL-GGGSLTFTSSFVGHTAGFAGVAPYA 160

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 93.7 bits (234), Expect = 4e-23
 Identities = 44/220 (20%), Positives = 76/220 (34%), Gaps = 66/220 (30%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYT 102
              KVV ITG+S+G+G+++A++ +   AK+V++ RS       V     + G        
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---EAIA 61

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
           +  DVT          + I++FG LD++INNAG     +  ++ L               
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD------------- 108

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
                           ++ VI                                 + N+  
Sbjct: 109 ----------------WNKVI---------------------------------DTNLTG 119

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
               SR A  YF+  +  G ++  SS+   +  P    Y 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA 159

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 93.7 bits (234), Expect = 5e-23
 Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 65/223 (29%)

Query: 39  KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
           +R     NKV  +T ++ GIG A+A +L++ GA +V+S+R   N++R        G    
Sbjct: 7   ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL--- 63

Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY 158
           S+      V + +   R     +   G +DIL++NA                       +
Sbjct: 64  SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAA-------------------VNPF 104

Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
             +I   T +V         +D ++         +N                        
Sbjct: 105 FGNIIDATEEV---------WDKILH--------VN------------------------ 123

Query: 219 NVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            V + + +++        R  GG +++ SS+      P  G Y
Sbjct: 124 -VKATVLMTKAVVPEMEKR-GGGSVLIVSSVGAYHPFPNLGPY 164

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 94.5 bits (235), Expect = 1e-22
 Identities = 40/216 (18%), Positives = 73/216 (33%), Gaps = 59/216 (27%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
                V+ITGAS GIG+A+AL+ +K GA +V++A+++    ++            +IYT 
Sbjct: 43  LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKL----------LGTIYT- 91

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
                             ++       I   G   +A                       
Sbjct: 92  ----------------AAEE-------IEAVGG--KA----------------------L 104

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
              +DV   +      +  I++FG +DIL+NNA         D   +    +  +N    
Sbjct: 105 PCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGT 164

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSG 259
              S+    Y    +   H++  S    +    +  
Sbjct: 165 YLASKACIPYLKKSK-VAHILNISPPLNLNPVWFKQ 199

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 92.6 bits (231), Expect = 1e-22
 Identities = 40/218 (18%), Positives = 67/218 (30%), Gaps = 67/218 (30%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLS--ARSSSNLERVKNLCVQAGAHPQSIYTL 103
           +KV  +TG + GIG  ++ +L+  G  + ++   +          L   A         +
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQ---KAVFV 58

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            LDVT         D   ++ G  D+L+NNAG +Q     ++  E               
Sbjct: 59  GLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEED-------------- 104

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                             +                                   +NVFSV
Sbjct: 105 ---------------LKQIYS---------------------------------VNVFSV 116

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
               + A+  F      G ++  +SIA I G P   +Y
Sbjct: 117 FFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAY 154

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 92.7 bits (231), Expect = 1e-22
 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           +  ++ITGA+SG GEA A + ++ G  LVL+ R     ER++ L  +  A  + +  LTL
Sbjct: 21  SSTLFITGATSGFGEACARRFAEAGWSLVLTGR---REERLQALAGELSAKTR-VLPLTL 76

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DV          D + ++F  L  LINNAG
Sbjct: 77  DVRDRAAMSAAVDNLPEEFATLRGLINNAG 106

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 15/109 (13%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVDREL 215
           +  LTLDV          D + ++F  L  LINNAG       +Q    +D +      +
Sbjct: 71  VLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWD-----TM 125

Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPYSGS 260
            + N+  +L  +R+     +A   G  +V   S+AG         Y G+
Sbjct: 126 VDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGT 174

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 92.6 bits (231), Expect = 1e-22
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           N    KVV ITG SSG+G+ +A + +K GA++V++ R+   LE  K    Q       I 
Sbjct: 2   NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG---QIL 58

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           T+ +DV  T   ++  + + ++FG +DILINNA  +     ED+ + 
Sbjct: 59  TVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVN 105

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 56.7 bits (138), Expect = 9e-10
 Identities = 19/99 (19%), Positives = 42/99 (42%)

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
            T+ +DV  T   ++  + + ++FG +DILINNA  +     ED+ +     +  + +  
Sbjct: 58  LTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNG 117

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
               S+    Y++ +   G+++   +       P     
Sbjct: 118 TFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHS 156

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 92.3 bits (230), Expect = 1e-22
 Identities = 27/103 (26%), Positives = 37/103 (35%), Gaps = 3/103 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             NK V    A  GIG   + +L K   K  +      N   +  L  +A     +I   
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAEL--KAINPKVNITFH 60

Query: 104 TLDVTQ-TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 145
           T DVT      ++    +  Q   +DILIN AG       E  
Sbjct: 61  TYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERT 103

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 63.8 bits (156), Expect = 3e-12
 Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 11/104 (10%)

Query: 162 IYTLTLDVTQ-TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
           I   T DVT      ++    +  Q   +DILIN AG       E            +N 
Sbjct: 57  ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERT--------IAINF 108

Query: 221 FSVLSLSRIATSYFLAREQGGHLVV--TSSIAGIVGAPYSGSYT 262
             +++ +     ++  R+ G   ++    S+ G         Y+
Sbjct: 109 TGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS 152

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 8/91 (8%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVL--SARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           KV+ +TG S GIG+++   L       V+   ARS + L+++K        +    + + 
Sbjct: 3   KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKE------KYGDRFFYVV 56

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            D+T+    ++  +A ++  G +D L+ NAG
Sbjct: 57  GDITEDSVLKQLVNAAVKGHGKIDSLVANAG 87

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 92.7 bits (231), Expect = 2e-22
 Identities = 40/220 (18%), Positives = 66/220 (30%), Gaps = 67/220 (30%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              +V  ITG +SG+G AL  +    GA++ +  +   + ER++ L V  G    +   +
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDK---SAERLRELEVAHGG---NAVGV 56

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDIELEVDRELFTYAYRPSI 162
             DV   +  +R  +  +  FG +D LI NAG    +    D+  +              
Sbjct: 57  VGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAA--------- 107

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
                           FD +                                   +NV  
Sbjct: 108 ----------------FDDIF---------------------------------HVNVKG 118

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            +   +            G +V T S AG         YT
Sbjct: 119 YIHAVKACLPAL--VSSRGSVVFTISNAGFYPNGGGPLYT 156

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 9/103 (8%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            K+V ITGASSGIGEA+A + S+ G  L+L AR    L+ +            +     +
Sbjct: 16  KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL---------PNTLCAQV 66

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           DVT             + +G  D ++NNAG       +  E  
Sbjct: 67  DVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEAN 109

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 66.1 bits (162), Expect = 5e-13
 Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 5/103 (4%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
                +DVT             + +G  D ++NNAG       +  E    + +F++NV 
Sbjct: 61  TLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIV----GAPYSGS 260
            +L+  +   +   AR   G ++  SSIAG       A Y G+
Sbjct: 121 GLLNGMQAVLAPMKAR-NCGTIINISSIAGKKTFPDHAAYCGT 162

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 91.9 bits (229), Expect = 2e-22
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           FN KV  +TGA   IG A AL+L++ G  + L   +   LE+ +    + G       + 
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV---EARSY 61

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DVT  +      D+V++ FG +D L NNAG
Sbjct: 62  VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAG 93

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 60.3 bits (147), Expect = 5e-11
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDIELEVDRELFELNVFSV 223
              DVT  +      D+V++ FG +D L NNAG     A  +D   +    +  +NV   
Sbjct: 61  YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 120

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             + +  +   + +   G +V T+S+AG+ G P   +Y 
Sbjct: 121 FHVLKAVSRQMITQ-NYGRIVNTASMAGVKGPPNMAAYG 158

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 92.1 bits (229), Expect = 5e-22
 Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 5/121 (4%)

Query: 143 EDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 202
           +      +          S+ TL LDV  +K      + V +  G +D+L+ NAG     
Sbjct: 40  KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLG 97

Query: 203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
             E +  +    + ++NV   + + +        + +G G ++VT S+ G++G P++  Y
Sbjct: 98  PLEALGEDAVASVLDVNVVGTVRMLQAFLPDM--KRRGSGRVLVTGSVGGLMGLPFNDVY 155

Query: 262 T 262
            
Sbjct: 156 C 156

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 90.9 bits (226), Expect = 2e-21
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 5/111 (4%)

Query: 47  KVVWITGASSGIGEALALQLSKC---GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            VV ITG SSGIG  LA++L+       K+  + R      R+          P S+ TL
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
            LDV  +K      + V +  G +D+L+ NAG       E +  +    + 
Sbjct: 63  QLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVL 111

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 90.8 bits (226), Expect = 7e-22
 Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            +++V  +TGA+SGIG  +A +L K G ++ + AR    L        +AG         
Sbjct: 20  QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV---EADGR 76

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 137
           T DV           AV++++G +D+L+NNAGR 
Sbjct: 77  TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRP 110

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 21/109 (19%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ--------RAAWEDIELEVDRELF 216
            T DV           AV++++G +D+L+NNAGR             W D+ +E      
Sbjct: 76  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDV-VET----- 129

Query: 217 ELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVG----APYSGS 260
             N+  V  +++         E+G G +V  +S  G  G    APYS S
Sbjct: 130 --NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS 176

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 91.1 bits (227), Expect = 7e-22
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)

Query: 30  YLFFIEKINKRLNYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVK 87
           ++  + +  K   Y+   NKV  +TGA  GIG  +A  L+K  + ++  +R+  + + V 
Sbjct: 26  FMNLLSENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV 85

Query: 88  NLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +     G           DV++ +      + ++ +   +DIL+NNAG
Sbjct: 86  DEIKSFGY---ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAG 130

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 89.9 bits (224), Expect = 1e-21
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            N KV  +TGAS GIG  +A  L+  GA +V +A S ++ E+ +N   + G        L
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF---KARGL 59

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            L+++  +  +  F  +  +   +DIL+NNAG
Sbjct: 60  VLNISDIESIQNFFAEIKAENLAIDILVNNAG 91

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 90.3 bits (225), Expect = 1e-21
 Identities = 40/220 (18%), Positives = 69/220 (31%), Gaps = 67/220 (30%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
                  +TG S GIG A+  +L+  GA++   +R+   L+    +  + G    ++   
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL---NVEGS 75

Query: 104 TLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
             D+       +    V   F G L+IL+NNAG       +D   +              
Sbjct: 76  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKD------------- 122

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
                           ++ ++                                   N  +
Sbjct: 123 ----------------YNIIM---------------------------------GTNFEA 133

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
              LS+IA     A  Q G+++  SSIAG    P    Y+
Sbjct: 134 AYHLSQIAYPLLKAS-QNGNVIFLSSIAGFSALPSVSLYS 172

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 89.5 bits (223), Expect = 1e-21
 Identities = 47/223 (21%), Positives = 72/223 (32%), Gaps = 72/223 (32%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  ITGA SG GE +A + +K GAK+V+  R  +  ERV      AG    +   +
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV------AGEIGDAALAV 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFTYAYRPSI 162
             D+++        +A + +FG +DIL+NNAG   +    E +E E              
Sbjct: 61  AADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEE------------- 107

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
                           FD ++                                  +NV  
Sbjct: 108 ----------------FDRIV---------------------------------GVNVRG 118

Query: 223 VLSLSRIATSYFLAREQGGHLVV---TSSIAGIVGAPYSGSYT 262
           V  ++     +F      G   V    +S       P    Y 
Sbjct: 119 VYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYN 161

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 89.5 bits (223), Expect = 2e-21
 Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 3/92 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            +N+V  +TG +  IG A    L++ GA+++++    +   +        G     + ++
Sbjct: 11  LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH---DVSSV 67

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            +DVT T+  +    +V +Q G +DIL+  AG
Sbjct: 68  VMDVTNTESVQNAVRSVHEQEGRVDILVACAG 99

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 59.1 bits (144), Expect = 1e-10
 Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 8/103 (7%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFELNVFSV 223
           + +DVT T+  +    +V +Q G +DIL+  AG        ED+      +  ++N+  +
Sbjct: 67  VVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGM 126

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVG------APYSGS 260
               +      L + + G +V   S++G++       A Y+ S
Sbjct: 127 FRSCQAVGRIMLEQ-KQGVIVAIGSMSGLIVNRPQQQAAYNAS 168

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 89.7 bits (223), Expect = 2e-21
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 4/94 (4%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCG---AKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
             K V ITGAS+GIG+A AL+  +      KL+L+AR    LE +K    Q   + + ++
Sbjct: 32  AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAK-VH 90

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
              LD+TQ +  +   + + Q+F  +DIL+NNAG
Sbjct: 91  VAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG 124

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 63.1 bits (154), Expect = 7e-12
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 12/121 (9%)

Query: 148 EVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQR 201
           E+ + +        ++   LD+TQ +  +   + + Q+F  +DIL+NNAG      R  +
Sbjct: 75  ELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQ 134

Query: 202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            A EDI+     ++F+ NV +++++++     F A+   G +V   SIAG    P    Y
Sbjct: 135 IATEDIQ-----DVFDTNVTALINITQAVLPIFQAK-NSGDIVNLGSIAGRDAYPTGSIY 188

Query: 262 T 262
            
Sbjct: 189 C 189

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 90.0 bits (224), Expect = 2e-21
 Identities = 31/224 (13%), Positives = 69/224 (30%), Gaps = 66/224 (29%)

Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQ 98
             N F  KV +ITG  +G+G+ +   LS  GA+ V+++R    L+   + +  Q G    
Sbjct: 20  PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN--- 76

Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY 158
            ++ +  DV      +     +I+  G  +I+INNA  +  +  E +             
Sbjct: 77  KVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNA--------- 127

Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
                               +  +                                  ++
Sbjct: 128 --------------------WKTIT---------------------------------DI 134

Query: 219 NVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            +     ++       +  ++G   +  ++I    G+ +     
Sbjct: 135 VLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA 178

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 88.4 bits (220), Expect = 2e-21
 Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 9/102 (8%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
            ++ ITGASSG+G  LA      G    L+ RS S L  V            ++     D
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTV------TNCLSNNVGYRARD 55

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           +   +   + F+ +         ++++AG       ++ + E
Sbjct: 56  LASHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPE 94

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 71.1 bits (175), Expect = 6e-15
 Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
               D+   +   + F+ +         ++++AG       ++ + E  + L E N+ S 
Sbjct: 51  YRARDLASHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSA 107

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +++ R     +  ++Q  ++V+  S A         +Y
Sbjct: 108 INVLRELVKRY--KDQPVNVVMIMSTAAQQPKAQESTY 143

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 89.7 bits (223), Expect = 3e-21
 Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 3/111 (2%)

Query: 38  NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP 97
           +  L+ F+ +   +TG +SGIG A A + ++ GA+LVLS      LE+  N     G   
Sbjct: 23  DGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-- 80

Query: 98  QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
              + +  DV       R  D   +  G +D++ +NAG         +  +
Sbjct: 81  -DAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHD 130

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 21/99 (21%), Positives = 41/99 (41%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
            +  DV       R  D   +  G +D++ +NAG         +  +  R + +++++  
Sbjct: 84  GVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGS 143

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           +          L +  GGH+  T+S AG+V     G+Y 
Sbjct: 144 IHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYG 182

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 89.2 bits (222), Expect = 3e-21
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 5/106 (4%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             KV  +TG+S GIG A+A   ++ GA + +   S    E+ ++L    G H        
Sbjct: 33  KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH---SKAYK 89

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELE 148
            +++  K          + FG +D+ + NAG   +Q    +    +
Sbjct: 90  CNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYD 135

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 89.2 bits (222), Expect = 3e-21
 Identities = 45/219 (20%), Positives = 75/219 (34%), Gaps = 52/219 (23%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              +V +ITGA+ G G + A++L+  GA ++             ++C    A        
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIAC-----------DICAPVSASVTYAPAS 61

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+ +T                   L+ + GR                           
Sbjct: 62  PEDLDETAR-----------------LVEDQGRK------------------------AL 80

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
           T  LDV      R      ++QFG LD+++ NAG        ++  E    +  +N+   
Sbjct: 81  TRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGT 140

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
               R      +    GG +VV SS AG+   P +G Y+
Sbjct: 141 WRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYS 179

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 88.7 bits (221), Expect = 3e-21
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            N+ V  +TGA++GIG A+A   +K GA +V++   S   E V     QAG        L
Sbjct: 10  LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG---KAIGL 66

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             +VT  ++      A + QFG + +L+NNAG
Sbjct: 67  ECNVTDEQHREAVIKAALDQFGKITVLVNNAG 98

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 59.8 bits (146), Expect = 7e-11
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 16/104 (15%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-------RSQRAAWEDIELEVDRELFE 217
           L  +VT  ++      A + QFG + +L+NNAG           + +E          F+
Sbjct: 66  LECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWA--------FK 117

Query: 218 LNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           LN+FS+  LS++A  +      GG ++  SS+AG        SY
Sbjct: 118 LNLFSLFRLSQLAAPHMQKA-GGGAILNISSMAGENTNVRMASY 160

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 88.3 bits (220), Expect = 4e-21
 Identities = 41/218 (18%), Positives = 71/218 (32%), Gaps = 64/218 (29%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F NKV  +TG+  GIG+A A  L++ GA +V++  ++   E V    V  G    +  ++
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG---TAISV 63

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            +DV+  +  +   D  + +FG +D L+NNA                           I+
Sbjct: 64  AVDVSDPESAKAMADRTLAEFGGIDYLVNNAA--------------------------IF 97

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          +   +                                  +N+   
Sbjct: 98  GGMKLDFLLTIDPEYYKKFM---------------------------------SVNLDGA 124

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVG-APYSGS 260
           L  +R        R  GG +V  SS A  +    Y  +
Sbjct: 125 LWCTRAVYKKMTKR-GGGAIVNQSSTAAWLYSNYYGLA 161

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 88.4 bits (220), Expect = 4e-21
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYT 102
              K V ITG+S GIG A A   ++ GAK+ L  R +  N++         G        
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG---DAAF 61

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR 139
              D+  ++  ++  D  + +FG +D+LINNAG    
Sbjct: 62  FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVG 98

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 59.9 bits (146), Expect = 6e-11
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 10/107 (9%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-AAWEDIELEVDRELFELNVFS 222
               D+  ++  ++  D  + +FG +D+LINNAG         +I+      + + N+ S
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRS 120

Query: 223 VLSLSRIATSYFLAR----EQGGHLVVTSSIAGIVG-----APYSGS 260
           V+  ++ A  +  A      Q   ++ T SIAG  G       Y  +
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAA 167

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 88.4 bits (220), Expect = 5e-21
 Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 1/102 (0%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            N KV  +TGA+ GIG A A  L   GAK+ L   +     + K    +     ++++ +
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF-I 63

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 145
             DV   +  R  F  V+  FG LDIL+NNAG +    WE  
Sbjct: 64  QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKT 105

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 10/97 (10%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV   +  R  F  V+  FG LDIL+NNAG +    WE           ++N+ SV+S +
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKT--------LQINLVSVISGT 117

Query: 228 RIATSYFLAREQGGHLVV--TSSIAGIVGAPYSGSYT 262
            +   Y   +  G   ++   SS+AG++       Y 
Sbjct: 118 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC 154

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 88.3 bits (220), Expect = 5e-21
 Identities = 38/219 (17%), Positives = 67/219 (30%), Gaps = 67/219 (30%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
                 +TG S GIG  +  +L+  GA +   +R+   L          G     +    
Sbjct: 8   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF---KVEASV 64

Query: 105 LDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            D++     +   + V   F G L+IL+NNAG       +D  +E               
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED-------------- 110

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          +  ++                                  +N  + 
Sbjct: 111 ---------------YSLIMS---------------------------------INFEAA 122

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             LS +A  +  A  + G++V  SS++G +  PY   Y 
Sbjct: 123 YHLSVLAHPFLKAS-ERGNVVFISSVSGALAVPYEAVYG 160

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 88.3 bits (220), Expect = 5e-21
 Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 41  LNYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHP 97
              F+   +V  +TG S G+G  +A  L++ G  +V+++R+        + L  + G   
Sbjct: 14  KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE- 72

Query: 98  QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
                   DV+  +  ++  +AV ++FG LD ++N AG ++R   E+  L+
Sbjct: 73  --TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD 121

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 88.4 bits (220), Expect = 6e-21
 Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + +V  +TGAS GIG A+AL+L++ GA ++ +A + +  E +     QAG         
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL---EGRGA 82

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            L+V          ++ +++FG L++L+NNAG
Sbjct: 83  VLNVNDATAVDALVESTLKEFGALNVLVNNAG 114

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 87.5 bits (218), Expect = 6e-21
 Identities = 45/220 (20%), Positives = 72/220 (32%), Gaps = 68/220 (30%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           ++V  +TGASSG G A+A +    G ++     S+  LE        A A    +  +  
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYAD--KVLRVRA 59

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG---RSQRAAWEDIELEVDRELFTYAYRPSI 162
           DV           A ++QFG +D+L+NNAG    S+        +E              
Sbjct: 60  DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQ------------- 106

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
                           FD V+                                  +NV  
Sbjct: 107 ----------------FDKVM---------------------------------AVNVRG 117

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           +    R    + L +   G +V  +S+A +V  P   +YT
Sbjct: 118 IFLGCRAVLPHMLLQ-GAGVIVNIASVASLVAFPGRSAYT 156

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 87.2 bits (217), Expect = 8e-21
 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 12/109 (11%)

Query: 48  VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV 107
           +V +TGA++G GE +  +  + G K++ + R     ER++ L  + G    ++Y   LDV
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGR---RQERLQELKDELGD---NLYIAQLDV 55

Query: 108 TQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVD 150
                      ++  ++  +DIL+NNAG       + +A+ ED E  +D
Sbjct: 56  RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMID 104

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 61.8 bits (151), Expect = 2e-11
 Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 12/107 (11%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG------RSQRAAWEDIELEVDREL 215
           +Y   LDV           ++  ++  +DIL+NNAG       + +A+ ED E      +
Sbjct: 48  LYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWE-----TM 102

Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            + N   ++ ++R      + R   GH++   S AG         Y 
Sbjct: 103 IDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGSWPYAGGNVYG 148

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 88.4 bits (220), Expect = 9e-21
 Identities = 44/232 (18%), Positives = 76/232 (32%), Gaps = 78/232 (33%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVL------------SARSSSNLERVKNLCV 91
              KV +ITGA+ G G + A+ L++ GA ++                +  +L        
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 92  QAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVD 150
             G     I    +DV      +   D  + Q G LDI++ NA   S+      ++ +  
Sbjct: 86  ALGR---RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKT- 141

Query: 151 RELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 210
                                       +  +I      D+                   
Sbjct: 142 ----------------------------WRDMI------DV------------------- 148

Query: 211 VDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
                   N+      +R+A  + +A ++GG +V TSSI G+ GA   G+Y 
Sbjct: 149 --------NLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYI 192

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 87.6 bits (218), Expect = 9e-21
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 12/92 (13%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KVV ITGAS GIG  L         ++V ++RS           V            
Sbjct: 26  NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAG---------- 75

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             D+++ +   R     I++FG +D L+NNAG
Sbjct: 76  --DISKPETADRIVREGIERFGRIDSLVNNAG 105

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 54.1 bits (131), Expect = 6e-09
 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 1/98 (1%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
           T+  D+++ +   R     I++FG +D L+NNAG      + ++  E       +NV   
Sbjct: 72  TVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGF 131

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             +++ A +  L +   GH+V  ++           S 
Sbjct: 132 FHITQRAAAEMLKQ-GSGHIVSITTSLVDQPMVGMPSA 168

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 87.2 bits (217), Expect = 1e-20
 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 2/105 (1%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + KV  ITG+SSGIG A+A   +K GA +VL AR    L        +       +  +
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF--GVRVLEV 62

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            +DV   +      ++V   FG  DIL+NNAG        +   E
Sbjct: 63  AVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADE 107

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 87.2 bits (217), Expect = 1e-20
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            N K+  ITGA+SGIG A A +    GA++ ++ R    L+       + G        +
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA---EIGG---GAVGI 80

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             D        R ++ V  + G +D+L  NAG        ++  E
Sbjct: 81  QADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEE 125

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 71.0 bits (175), Expect = 1e-14
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 3/95 (3%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           D        R ++ V  + G +D+L  NAG        ++  E   + F+ NV  VL   
Sbjct: 83  DSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTV 142

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           + A        +G  +V+T S AG  G P    Y 
Sbjct: 143 QKALPLL---ARGSSVVLTGSTAGSTGTPAFSVYA 174

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 87.0 bits (216), Expect = 2e-20
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKC---GAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
               V  +TGAS G G ALA QL++    G+ +++SARS S L ++K     A      +
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL-GAQQPDLKV 62

Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGC----LDILINNAG 135
                D+      +R   AV +          +LINNA 
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAA 101

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 87.3 bits (217), Expect = 2e-20
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             +  ++TG SSGIG A+A  L+  G  +   AR + N+    +    AG     +   +
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH---DVDGSS 79

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 137
            DVT T        A +++FG + IL+N+AGR+
Sbjct: 80  CDVTSTDEVHAAVAAAVERFGPIGILVNSAGRN 112

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
            + DVT T        A +++FG + IL+N+AGR+      D++  +  ++ + N+  V 
Sbjct: 78  SSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVF 137

Query: 225 SLSRIATSYFLAREQG-GHLVVTSSIAGIVG----APYSGS 260
            ++R        RE G G +V  +S  G  G    APY+ S
Sbjct: 138 RVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTAS 178

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 86.8 bits (216), Expect = 2e-20
 Identities = 40/220 (18%), Positives = 70/220 (31%), Gaps = 72/220 (32%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           +  KVV +TG   GIG  +       GA++V+  +  S    ++     A         +
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVF-------I 59

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDIELEVDRELFTYAYRPSI 162
             DVTQ    +      I++FG LD ++NNAG        E+   +              
Sbjct: 60  LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQG------------- 106

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
                           F  ++                                 ELN+  
Sbjct: 107 ----------------FRQLL---------------------------------ELNLLG 117

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             +L+++A  Y       G+++  SS+ G +G   +  Y 
Sbjct: 118 TYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYV 155

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 86.5 bits (215), Expect = 3e-20
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYT 102
             +KV +ITG  SGIG  +A    + G   V+++RS   +    + L   AGA  +    
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKL---AGATGRRCLP 81

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           L++DV          D  +++FG +DILIN A 
Sbjct: 82  LSMDVRAPPAVMAAVDQALKEFGRIDILINCAA 114

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 1/98 (1%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
            L++DV          D  +++FG +DILIN A  +       +     + + +++    
Sbjct: 81  PLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGT 140

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            ++SR+    F  R+ GG +V  ++  G  G       
Sbjct: 141 FNVSRVLYEKFF-RDHGGVIVNITATLGNRGQALQVHA 177

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 86.9 bits (216), Expect = 3e-20
 Identities = 18/98 (18%), Positives = 43/98 (43%), Gaps = 2/98 (2%)

Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP-- 97
                  +V  +TG ++GIG+A+  +L + G+ +V+++R    L+   +           
Sbjct: 12  APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQ 71

Query: 98  QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             +  +  ++   +       + +  FG ++ L+NN G
Sbjct: 72  ARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG 109

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
           +  +  ++   +       + +  FG ++ L+NN G    +  E I  +    + E N+ 
Sbjct: 74  VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 133

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
               + +   S ++  ++ G  +V   +    G P +   
Sbjct: 134 GTFYMCKAVYSSWM--KEHGGSIVNIIVPTKAGFPLAVHS 171

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 85.6 bits (213), Expect = 3e-20
 Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYT 102
              KV  +TG++ GIG A+A +L+  G+ ++++  S    +   + +  + G      + 
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV---KAHG 61

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           + +++   +   + F+ +      +DIL+NNAG
Sbjct: 62  VEMNLLSEESINKAFEEIYNLVDGIDILVNNAG 94

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 44.4 bits (106), Expect = 1e-05
 Identities = 20/110 (18%), Positives = 47/110 (42%), Gaps = 21/110 (19%)

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRE 214
           + + +++   +   + F+ +      +DIL+NNAG        R     WE++       
Sbjct: 60  HGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEV------- 112

Query: 215 LFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
             ++N+     +++ +    + +++ G +V  SS+ G  G      YS +
Sbjct: 113 -LKVNLTGTFLVTQNSLRKMI-KQRWGRIVNISSVVGFTGNVGQVNYSTT 160

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 85.3 bits (212), Expect = 6e-20
 Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              + V +TG + GIG  +A   ++ GA + ++ RS+++++       Q G+    +  +
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS--GKVIGV 65

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV+            +++FG +D++  NAG
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAG 97

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 85.3 bits (212), Expect = 6e-20
 Identities = 38/219 (17%), Positives = 71/219 (32%), Gaps = 67/219 (30%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
             NK   +TG+S G+G+A A++L++ G  +V++ ARS            + G     +  
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK---VLV 58

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
           +  +V Q    +  F  + + FG LD+ +NNA         ++E                
Sbjct: 59  VKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETH------------- 105

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
                           +D  +                                  +N  +
Sbjct: 106 ----------------WDWTM---------------------------------NINAKA 116

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +L  ++ A      +  GGH+V  SS+  I       + 
Sbjct: 117 LLFCAQEAAKLME-KNGGGHIVSISSLGSIRYLENYTTV 154

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 86.2 bits (214), Expect = 6e-20
 Identities = 42/231 (18%), Positives = 69/231 (29%), Gaps = 77/231 (33%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVL------------SARSSSNLERVKNLCV 91
              KV +ITGA+ G G   A++L++ GA +V             +  S   L+    L  
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 92  QAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
           + G     I     DV      +   D  + +FG +DIL++N G S +     +  +   
Sbjct: 104 EQGR---RIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQ-- 158

Query: 152 ELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 211
                                      +  ++                            
Sbjct: 159 ---------------------------WSDIL------QT-------------------- 165

Query: 212 DRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
                  N+       R      + R QGG ++  SS  G+ GAP    Y 
Sbjct: 166 -------NLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYA 209

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 85.3 bits (212), Expect = 6e-20
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              +   +TGA+ GIGEA+A      GA + L       L+ +       G     ++  
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAA---DLGK---DVFVF 78

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           + +++  K  ++  +   ++   +DIL+NNAG
Sbjct: 79  SANLSDRKSIKQLAEVAEREMEGIDILVNNAG 110

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 21/111 (18%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDR 213
           ++  + +++  K  ++  +   ++   +DIL+NNAG        R Q   W+D+      
Sbjct: 75  VFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDV------ 128

Query: 214 ELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
               +N+ +  +L+R      + R + G ++  +SI G+VG P    Y  +
Sbjct: 129 --LAVNLTAASTLTRELIHSMM-RRRYGRIINITSIVGVVGNPGQTNYCAA 176

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 85.7 bits (213), Expect = 7e-20
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + + V +TG + GIG  +A   ++ GA + ++ARS   L  V     + GA   ++  +
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAG--NVIGV 96

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            LDV+           V+  FG LD++  NAG
Sbjct: 97  RLDVSDPGSCADAARTVVDAFGALDVVCANAG 128

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 17/97 (17%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
           + LDV+           V+  FG LD++  NAG                ++         
Sbjct: 96  VRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEV--------L 147

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV 253
           ++NV   +   +   +        G +++TSSI G V
Sbjct: 148 DVNVKGTVYTVQACLAPLT-ASGRGRVILTSSITGPV 183

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 84.9 bits (211), Expect = 1e-19
 Identities = 38/219 (17%), Positives = 65/219 (29%), Gaps = 69/219 (31%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            N +V  +TG  SGIG A A   +K GA +V++  +     RV      A       + +
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV------ANEIGSKAFGV 78

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            +DV+  K      +    ++G +D+L+NNAG         I  E               
Sbjct: 79  RVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEET-------------- 124

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          +D ++                                  +NV  +
Sbjct: 125 ---------------WDRIM---------------------------------SVNVKGI 136

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
              S+           GG ++ T+S           +Y 
Sbjct: 137 FLCSKYVIPVMRRN-GGGSIINTTSYTATSAIADRTAYV 174

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 8/110 (7%)

Query: 41  LNYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
              F        +TGA SGIG  +    +  GA+L+L  R ++ L+R       A A   
Sbjct: 4   RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAAR- 62

Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
               +  DVT  +          +    + IL+N+AG ++     + +  
Sbjct: 63  ----IVADVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDALETDDA 107

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 59.1 bits (144), Expect = 1e-10
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 8/104 (7%)

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
             +  DVT  +          +    + IL+N+AG ++     + +    R++  +NV  
Sbjct: 61  ARIVADVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDG 119

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVG------APYSGS 260
           +   SR      +AR   G +V   S++G +       + Y  S
Sbjct: 120 MFWASRAFGRAMVAR-GAGAIVNLGSMSGTIVNRPQFASSYMAS 162

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 84.6 bits (210), Expect = 2e-19
 Identities = 43/236 (18%), Positives = 79/236 (33%), Gaps = 82/236 (34%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVL----------------SARSSSNLERVK 87
              KV ++TGA+ G G + A++L++ GA ++                  A +  +L    
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 88  NLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIE 146
           +L          I T  +DV      +   D+ ++Q G LDI++ NAG  +     +   
Sbjct: 69  DLVKGHNR---RIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTS 125

Query: 147 LEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED 206
            E                              +  +I      DI               
Sbjct: 126 EED-----------------------------WTEMI------DI--------------- 135

Query: 207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
                       N+  V    +    + +A  +GG +++TSS+ G+   P++G Y 
Sbjct: 136 ------------NLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYV 179

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
              K   +TG+S G+G+A+A +L   GA +VL+ + +S++L+        AG    ++  
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI---NVVV 59

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
              DV   +         +  FG +DIL+NNAG
Sbjct: 60  AKGDVKNPEDVENMVKTAMDAFGRIDILVNNAG 92

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 43/219 (19%), Positives = 65/219 (29%), Gaps = 67/219 (30%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             NKV  ITGA  GIG   +  L++ GA++VL+         +       G         
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADL---PETDLAGAAASVGR---GAVHH 62

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            +D+T     R   D  I  FG LDI+ NNA               D           + 
Sbjct: 63  VVDLTNEVSVRALIDFTIDTFGRLDIVDNNAA---------HSDPAD---------MLVT 104

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
            +T+DV         +D                                     +N    
Sbjct: 105 QMTVDV---------WDDTF---------------------------------TVNARGT 122

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           + + + A    ++   GG +V  SS         S +Y 
Sbjct: 123 MLMCKYAIPRLISA-GGGAIVNISSATAHAAYDMSTAYA 160

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 83.7 bits (208), Expect = 2e-19
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 8/93 (8%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYT 102
              KV  +TGAS GIG+A+A  L++ GAK++ +A S S  + +   L             
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------- 59

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           + L+VT  +       A+  +FG +DIL+NNAG
Sbjct: 60  MALNVTNPESIEAVLKAITDEFGGVDILVNNAG 92

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 83.7 bits (208), Expect = 2e-19
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 38  NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP 97
           + RL+    KV  ITG + GIG A+A +  + GAK++++ R S   E+        G   
Sbjct: 1   SNRLD---GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK---SVGTPD 54

Query: 98  QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           Q  +    D +      + FDA  + FG +  L+NNAG +   + E+    
Sbjct: 55  QIQF-FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTA 104

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 71.8 bits (177), Expect = 5e-15
 Identities = 27/96 (28%), Positives = 44/96 (45%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
            D +      + FDA  + FG +  L+NNAG +   + E+      R+L  +N+  V   
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           +R+       +  G  ++  SSI G VG P  G+Y 
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYN 156

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 83.8 bits (208), Expect = 2e-19
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 10/91 (10%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             K+  +TGA+ G+G  +   LS+    +    R+    E +  L    G  P     + 
Sbjct: 4   KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNP---EHLAALAEIEGVEP-----IE 54

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            D+ +        D + +    +D L++ A 
Sbjct: 55  SDIVKEVLEEGGVDKL-KNLDHVDTLVHAAA 84

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 66.8 bits (164), Expect = 2e-13
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 3/105 (2%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
           A    +  +  D+ +        D + +    +D L++ A  ++    E   +       
Sbjct: 45  AEIEGVEPIESDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHL 103

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +LNV     LSR       A    G ++  +S AG    P +  Y
Sbjct: 104 DLNVIVPAELSRQLLPALRAA--SGCVIYINSGAGNGPHPGNTIY 146

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 83.8 bits (208), Expect = 2e-19
 Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 5/97 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI--- 100
             + +  +TGA SGIG A++++L+  GA +       +  +    L    G+        
Sbjct: 5   LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64

Query: 101 -YTLTLDVTQTKYHRRCFDAVIQQFG-CLDILINNAG 135
                 DV++ +  R   + V   F     ++++ AG
Sbjct: 65  HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAG 101

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 44.9 bits (107), Expect = 8e-06
 Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 17/130 (13%)

Query: 134 AGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG-CLDIL 192
               + AA E + L           R +      DV++ +  R   + V   F     ++
Sbjct: 37  CDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVV 96

Query: 193 INNAG--------RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLV 244
           ++ AG              W+ + + V       N+     +++ A    ++    G ++
Sbjct: 97  VSCAGITQDEFLLHMSEDDWDKV-IAV-------NLKGTFLVTQAAAQALVSNGCRGSII 148

Query: 245 VTSSIAGIVG 254
             SSI G VG
Sbjct: 149 NISSIVGKVG 158

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 83.7 bits (208), Expect = 2e-19
 Identities = 37/218 (16%), Positives = 65/218 (29%), Gaps = 71/218 (32%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           +  K   + G + G+G A   +L + GA+++L+ R+ SN+ R+             ++ L
Sbjct: 6   YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARI------REEFGPRVHAL 59

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+           A  Q  G +D+L  NAG S+   ++ +                  
Sbjct: 60  RSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEAS-------------- 105

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          +D                                     +N    
Sbjct: 106 ---------------YDRQF---------------------------------AVNTKGA 117

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
               +  T       +GG +V TSS+A   G P    Y
Sbjct: 118 FFTVQRLTPLI---REGGSIVFTSSVADEGGHPGMSVY 152

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 83.8 bits (208), Expect = 2e-19
 Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 9/89 (10%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
               +T      G   AL+LS+ G  +     S    + ++                 L 
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQ---------LK 52

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               +      +AV   +G +D+L++N  
Sbjct: 53  PMSEQEPAELIEAVTSAYGQVDVLVSNDI 81

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 49.1 bits (118), Expect = 3e-07
 Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 18/105 (17%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA---------WEDIELEVDRELFE 217
           L     +      +AV   +G +D+L++N   +             +            E
Sbjct: 51  LKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGA--------VE 102

Query: 218 LNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
                  +L     S    R + GH++  +S           +YT
Sbjct: 103 ALQIRPFALVNAVASQMKKR-KSGHIIFITSATPFGPWKELSTYT 146

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 83.7 bits (208), Expect = 2e-19
 Identities = 35/219 (15%), Positives = 66/219 (30%), Gaps = 72/219 (32%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  K V +TG + GIG A+A   ++ GA + L        E  + +              
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAF---------F 54

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            +D+   +   R  +      G +D+L+NNA  +   +   + L                
Sbjct: 55  QVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPE-------------- 100

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          +  V+                                 E+N+ + 
Sbjct: 101 ---------------WRRVL---------------------------------EVNLTAP 112

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           + LS +A         GG +V  +S+ G+     + +Y 
Sbjct: 113 MHLSALAAREMRKV-GGGAIVNVASVQGLFAEQENAAYN 150

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 83.3 bits (207), Expect = 3e-19
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
              KV  +TGAS GIG A+A+ L+K GA +V++ A +      V +   + G+       
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS---DAIA 58

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +  DV   +         +  FG +DIL+NNAG
Sbjct: 59  VRADVANAEDVTNMVKQTVDVFGQVDILVNNAG 91

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 83.3 bits (207), Expect = 3e-19
 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
           F N+ + + GA   IG A A++ ++ GA +VL+   ++           + G        
Sbjct: 6   FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS---ALA 62

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +  D+T          A   +FG +  L++ AG
Sbjct: 63  IKADLTNAAEVEAAISAAADKFGEIHGLVHVAG 95

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 62.2 bits (152), Expect = 1e-11
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 9/99 (9%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGR-SQRAAWEDIELEVDRELFELNVFSVLSL 226
           D+T          A   +FG +  L++ AG    R    +++     ++ ++N+ S+   
Sbjct: 66  DLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLT 125

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAP-----YSGS 260
           ++ A        +GG +V  SS AG  G       Y+ S
Sbjct: 126 AKTALPKMA---KGGAIVTFSSQAGRDGGGPGALAYATS 161

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 83.4 bits (207), Expect = 3e-19
 Identities = 35/219 (15%), Positives = 68/219 (31%), Gaps = 77/219 (35%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +KVV +TGAS GIG A+A +    G+K++  +       +                 +
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYD--------------HI 51

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DVT     +   D + +++G + +L+NNAG       E + +                
Sbjct: 52  ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGE-------------- 97

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          +  +I                                 ++N+F  
Sbjct: 98  ---------------WRRII---------------------------------DVNLFGY 109

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
              S+ A  Y +   +   +V  SS+   +    + +Y 
Sbjct: 110 YYASKFAIPYMIRS-RDPSIVNISSVQASIITKNASAYV 147

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 83.4 bits (207), Expect = 3e-19
 Identities = 40/219 (18%), Positives = 64/219 (29%), Gaps = 77/219 (35%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  KV  +TGA+ GIG A+   L   GA++ ++ R+ + +     L +            
Sbjct: 26  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD--LHLPG---------- 73

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+ +  Y      AV    G LDI++NNAG   R    +                   
Sbjct: 74  --DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDAD-------------- 117

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          +   +                                  +NV + 
Sbjct: 118 ---------------WSLSL---------------------------------GVNVEAP 129

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             + R A     A   GG +V  +S  G+   P    Y 
Sbjct: 130 FRICRAAIPLMAAA-GGGAIVNVASCWGLRPGPGHALYC 167

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 83.0 bits (206), Expect = 4e-19
 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 2/92 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + ++ ++TG   GIG ++  +L K G ++V     +S   R         A     Y  
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNS--PRRVKWLEDQKALGFDFYAS 68

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             +V      ++ FD V  + G +D+L+NNAG
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAG 100

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 83.4 bits (207), Expect = 4e-19
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             +V ++TG   G+G A++ +L   G  + +S    +  + V    +      +      
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN--DHVSTWLMHERDAGRDFKAYA 81

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +DV   +   RC + V+  FG +D+LINNAG
Sbjct: 82  VDVADFESCERCAEKVLADFGKVDVLINNAG 112

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 83.0 bits (206), Expect = 4e-19
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 8/93 (8%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYT 102
            + K + +TGA+SGIG A     ++ GA LV   R    L   V  L  +A A       
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIA------- 56

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +  DV+  K     F   +++FG L  + + AG
Sbjct: 57  VVADVSDPKAVEAVFAEALEEFGRLHGVAHFAG 89

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 22/107 (20%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
           +  DV+  K     F   +++FG L  + + AG             AWE + L V     
Sbjct: 57  VVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKV-LRV----- 110

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI--VG-APYSGS 260
             N+     ++R A    L    GG LV+T S+AG+   G A Y+  
Sbjct: 111 --NLTGSFLVARKAGEV-LEE--GGSLVLTGSVAGLGAFGLAHYAAG 152

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 82.9 bits (206), Expect = 4e-19
 Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 4/105 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             K V +TG + GIG A+  + +  GA +   AR+   L    +   + G     +    
Sbjct: 13  KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---VTGSV 69

Query: 105 LDVTQTKYHRRCFDAVIQQFGC-LDILINNAGRSQRAAWEDIELE 148
            D +      +    V   FG  LDILINN G  +     D   E
Sbjct: 70  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAE 114

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 56.0 bits (136), Expect = 2e-09
 Identities = 29/101 (28%), Positives = 40/101 (39%), Gaps = 2/101 (1%)

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGC-LDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
                D +      +    V   FG  LDILINN G  +     D   E        N+ 
Sbjct: 66  TGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLE 125

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           S   LS++A     A    G+++  SSIAG+V A     Y+
Sbjct: 126 SAYHLSQLAHPLLKAS-GCGNIIFMSSIAGVVSASVGSIYS 165

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 83.0 bits (206), Expect = 4e-19
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 3/93 (3%)

Query: 44  FNNKVVWITGAS-SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
              KVV +T A+ +GIG   A +    GA +V+S      L   ++     G     +  
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG--LGRVEA 77

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +  DVT T+         +++ G LD+L+NNAG
Sbjct: 78  VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAG 110

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 58.7 bits (143), Expect = 2e-10
 Identities = 26/97 (26%), Positives = 44/97 (45%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           +  DVT T+         +++ G LD+L+NNAG   +    D+  E    +  + + SV+
Sbjct: 78  VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVM 137

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             +R A  YF   + GG +V  +S+ G         Y
Sbjct: 138 RATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHY 174

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 82.9 bits (206), Expect = 5e-19
 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  ++G + G+G +    +   GAK+V         E  K +  +      + Y +
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI---LDEEGKAMAAELA--DAARY-V 58

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            LDVTQ    +   D  +  FG L +L+NNAG       ED  L 
Sbjct: 59  HLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALT 103

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 65.2 bits (160), Expect = 9e-13
 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 1/96 (1%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
           LDVTQ    +   D  +  FG L +L+NNAG       ED  L   + + ++N+  V   
Sbjct: 60  LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLG 119

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            R            G ++  SSI G+ G      YT
Sbjct: 120 IRAVVKPMKEA-GRGSIINISSIEGLAGTVACHGYT 154

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 83.1 bits (206), Expect = 5e-19
 Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 1/105 (0%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              K   ITG++SGIG A+A  L+K GA +VL+   + +  R     V   +    ++  
Sbjct: 23  MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH-H 81

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             D+T+          V  +FG  DIL+NNAG       ED  +E
Sbjct: 82  PADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVE 126

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 82.6 bits (205), Expect = 5e-19
 Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 2/104 (1%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             K+  +T  SSG+G A AL+L++ GA+L+L +R+   LE   +  + +      +  + 
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASR-IASLVSGAQVDIVA 64

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            D+ +     R F+   +  G  DIL+ + G  +   + ++ +E
Sbjct: 65  GDIREPGDIDRLFEKA-RDLGGADILVYSTGGPRPGRFMELGVE 107

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 83.0 bits (206), Expect = 5e-19
 Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 4/93 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
             +++  +TGAS GIG A+AL+L+  GAK+ ++ A S+   + V      AG      + 
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG---EAFA 82

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +  DV+Q       F AVI+++G LD+L+NNAG
Sbjct: 83  VKADVSQESEVEALFAAVIERWGRLDVLVNNAG 115

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 83.0 bits (206), Expect = 5e-19
 Identities = 45/219 (20%), Positives = 70/219 (31%), Gaps = 69/219 (31%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  +TGA +GIG A+A +L+  G  ++ +       +        A          
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA------ATKIGCGAAAC 80

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            +DV+  +      DA +  FG +D L+ NAG    A+  D  +E               
Sbjct: 81  RVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVED-------------- 126

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          FD VI       I                           N+   
Sbjct: 127 ---------------FDRVI------AI---------------------------NLRGA 138

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
              ++ A    + R  GG +V  SS+AG V    +G+Y 
Sbjct: 139 WLCTKHAAPRMIER-GGGAIVNLSSLAGQVAVGGTGAYG 176

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 83.0 bits (206), Expect = 5e-19
 Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 4/102 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           ++  +TG S GIG+ +A  L + GA++ + AR +             G        +  D
Sbjct: 30  RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG----DCQAIPAD 85

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           ++     RR   A+ +    LDIL+NNAG S  AA E   + 
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVS 127

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 82.6 bits (205), Expect = 6e-19
 Identities = 33/221 (14%), Positives = 60/221 (27%), Gaps = 71/221 (32%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVL---SARSSSNLERVKNLCVQAGAHPQSIY 101
            NKV+ I G    +G   A   +     LVL    A+ S    ++K+     GA      
Sbjct: 10  KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY- 68

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS 161
               D++  +   + FD   ++FG +DI IN  G+  +    +                 
Sbjct: 69  --QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAE------------ 114

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
                            FDA+                                   +N  
Sbjct: 115 -----------------FDAMDT---------------------------------INNK 124

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
                 + A  +       GH++  ++        +  +Y 
Sbjct: 125 VAYFFIKQAAKHM---NPNGHIITIATSLLAAYTGFYSTYA 162

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 82.2 bits (204), Expect = 6e-19
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 10/100 (10%)

Query: 36  KINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGA 95
             +  +     K   ITGASSGIG A+A  L K G+K+++S  +   L+ + N      A
Sbjct: 4   HHHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGN------A 57

Query: 96  HPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
              +      ++   +        +I +   LDIL+ NAG
Sbjct: 58  LKDNYTIEVCNLANKEE----CSNLISKTSNLDILVCNAG 93

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 21/93 (22%)

Query: 180 DAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFELNVFSVLSLSRIAT 231
             +I +   LDIL+ NAG        R +   ++ +         ++N+ +   L+R A 
Sbjct: 76  SNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKV--------IDINLKANFILNREAI 127

Query: 232 SYFLAREQGGHLVVTSSIAGIVGAP----YSGS 260
              + +++ G ++  SSI GI G P    Y  S
Sbjct: 128 KKMI-QKRYGRIINISSIVGIAGNPGQANYCAS 159

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 82.1 bits (204), Expect = 7e-19
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           +   ITGAS GIG A+AL+L++ G  L +   ++    E V     + G+    +  L  
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGS--PLVAVLGA 59

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           ++ + +          +  G LD L+NNAG
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAG 89

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 82.6 bits (205), Expect = 7e-19
 Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYT 102
              +   IT  + G+G+ +  +L   G  + ++  S +   E +K            +  
Sbjct: 5   RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEE---RLQF 61

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 137
           +  DVT+ +   +  +  +  FG +D LINNAG  
Sbjct: 62  VQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPY 96

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 163 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS 199
             +  DVT+ +   +  +  +  FG +D LINNAG  
Sbjct: 60  QFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPY 96

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 82.7 bits (205), Expect = 7e-19
 Identities = 37/228 (16%), Positives = 66/228 (28%), Gaps = 76/228 (33%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-------VKNLCVQAG-- 94
              K ++I+G S GIG A+A +++  GA + L A+S+    +             +AG  
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66

Query: 95  AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           A P     +  D+             ++QFG +DI +NNA     A              
Sbjct: 67  ALP-----IVGDIRDGDAVAAAVAKTVEQFGGIDICVNNAS----AIN------------ 105

Query: 155 TYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRE 214
                        +V   +     FD +                                
Sbjct: 106 --------LGSIEEVPLKR-----FDLMNG------------------------------ 122

Query: 215 LFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
              + V    ++S+    +   R+    L ++  I           Y 
Sbjct: 123 ---IQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYM 167

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 82.6 bits (205), Expect = 8e-19
 Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 70/224 (31%)

Query: 41  LNYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
              F+   +   +TGA SGIG A+A   ++ GA ++   R+    E    +         
Sbjct: 24  TGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIA----DGGG 79

Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY 158
           S   +  D+   +      + +      +D+L+NNAG   RA  E++ L           
Sbjct: 80  SAEAVVADLADLEGAANVAEEL-AATRRVDVLVNNAGIIARAPAEEVSLGR--------- 129

Query: 159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFEL 218
                               +  V+                                  +
Sbjct: 130 --------------------WREVLT---------------------------------V 136

Query: 219 NVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           N+ +   LSR   +  LA    G +V  +S+    G     +Y 
Sbjct: 137 NLDAAWVLSRSFGTAMLAH-GSGRIVTIASMLSFQGGRNVAAYA 179

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 81.8 bits (203), Expect = 8e-19
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
             K   +TGAS GIG ++ALQL++ G  + ++ A S    E V       G      + +
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV---DSFAI 59

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             +V      +     V+ QFG LD+L+NNAG
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAG 91

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 81.8 bits (203), Expect = 9e-19
 Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 6/107 (5%)

Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           N  + K V ITG + G+G   A Q    GA++VL+       E       + G    + Y
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADV---LDEEGAATARELGD--AARY 55

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
              LDVT  +  +R      ++FG +D L+NNAG S     E   +E
Sbjct: 56  -QHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE 101

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 66.0 bits (162), Expect = 5e-13
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
             LDVT  +  +R      ++FG +D L+NNAG S     E   +E  R++ E+N+  V 
Sbjct: 56  QHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVF 115

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
              +           GG +V  SS AG++G   + SY 
Sbjct: 116 IGMKTVIPAMKDA-GGGSIVNISSAAGLMGLALTSSYG 152

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 81.8 bits (203), Expect = 1e-18
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +K+  ITG ++GIG A+A + +  GA + ++    +     +      G     + T+
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGR---RVLTV 59

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV+Q          VI  FG  DIL+NNAG
Sbjct: 60  KCDVSQPGDVEAFGKQVISTFGRCDILVNNAG 91

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 57.5 bits (140), Expect = 4e-10
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 1/97 (1%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           +  DV+Q          VI  FG  DIL+NNAG      ++++  E  ++ FE+NV S  
Sbjct: 59  VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGF 118

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            +++            G ++  +S    +       Y
Sbjct: 119 LMAKAFVPGMKRN-GWGRIINLTSTTYWLKIEAYTHY 154

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 82.2 bits (204), Expect = 1e-18
 Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              K   +TG+++GIG+A+A  L   GA ++++ R   N+       ++A      +  +
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKE-IRAQYPDAILQPV 66

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             D+   +        VI+++  +DILINN G  +   + DI  E
Sbjct: 67  VADLGTEQ----GCQDVIEKYPKVDILINNLGIFEPVEYFDIPDE 107

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 81.4 bits (202), Expect = 1e-18
 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 8/92 (8%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +K V ITGA+ GIG A     +K GA+LV        L          GAH      +
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE---AVGAH-----PV 54

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            +DV       R F   +   G LD +++ AG
Sbjct: 55  VMDVADPASVERGFAEALAHLGRLDGVVHYAG 86

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 41.7 bits (99), Expect = 9e-05
 Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 17/96 (17%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
           + +DV       R F   +   G LD +++ AG        +     WE + L V     
Sbjct: 54  VVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELV-LRV----- 107

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI 252
             N+     +++ A+      +  G +V+T+S   +
Sbjct: 108 --NLTGSFLVAKAASEAMR-EKNPGSIVLTASRVYL 140

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 81.8 bits (203), Expect = 1e-18
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 13/105 (12%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F +KV  +TG SSGIG A+   L + GAK+V  +    +   V      +          
Sbjct: 12  FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV------SDH-------F 58

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            +DVT  +  +   +   +++G +DIL+NNAG  Q +       E
Sbjct: 59  KIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTE 103

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 66.4 bits (163), Expect = 4e-13
 Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 1/98 (1%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
             +DVT  +  +   +   +++G +DIL+NNAG  Q +       E+ R + ++NV    
Sbjct: 58  FKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSY 117

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            +++      LA    G ++  +S+        + +Y 
Sbjct: 118 LMAKYTIPVMLAI-GHGSIINIASVQSYAATKNAAAYV 154

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 81.0 bits (201), Expect = 2e-18
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 4/90 (4%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            VV +TGAS GIG+A+AL L K G K++++ ARS+   E V       G       T   
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG---QAITFGG 58

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DV++           I  +G +D+++NNAG
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNNAG 88

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 81.1 bits (201), Expect = 2e-18
 Identities = 48/220 (21%), Positives = 77/220 (35%), Gaps = 72/220 (32%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN--LERVKNLCVQAGAHPQSIY 101
              K   +TG++SGIG  +A  L++ GA +VL+        L  +    V+A  HP    
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHP---- 57

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS 161
               D++        F    ++FG +DIL+NNAG    A  E   LE             
Sbjct: 58  ---ADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLES------------ 102

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
                            +D +I                                  LN+ 
Sbjct: 103 -----------------WDKII---------------------------------ALNLS 112

Query: 222 SVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           +V   +R+A     AR   G ++  +S+ G+VG+    +Y
Sbjct: 113 AVFHGTRLALPGMRAR-NWGRIINIASVHGLVGSTGKAAY 151

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 80.7 bits (200), Expect = 3e-18
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 13/92 (14%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+ K VW+TGA  GIG A AL   + GAK+    ++ +  +                 T 
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ-------------YPFATE 51

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            +DV       +    ++ +   LD L+N AG
Sbjct: 52  VMDVADAAQVAQVCQRLLAETERLDALVNAAG 83

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 56.4 bits (137), Expect = 1e-09
 Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 21/109 (19%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDREL 215
           T  +DV       +    ++ +   LD L+N AG        +  +  W+          
Sbjct: 50  TEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQT-------- 101

Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG----APYSGS 260
           F +NV    +L +   + F  + +GG +V  +S A        + Y  S
Sbjct: 102 FAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVASDAAHTPRIGMSAYGAS 149

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 80.2 bits (199), Expect = 4e-18
 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYT 102
              K   +TGA+ GIG+A+A +L+  GA +++S  ++   +    ++  +A A       
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARA------- 56

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           +  D++     +  F  +    G +DIL+NNA 
Sbjct: 57  IAADISDPGSVKALFAEIQALTGGIDILVNNAS 89

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 51.7 bits (125), Expect = 4e-08
 Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 16/100 (16%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELF 216
           +  D++     +  F  +    G +DIL+NNA               W  I ++V     
Sbjct: 57  IAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKI-IDV----- 110

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP 256
             N+     ++R  T    A  + G ++  +S     G P
Sbjct: 111 --NLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP 148

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 80.3 bits (199), Expect = 4e-18
 Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 14/92 (15%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             ++ V +TG + GIG A+A   +  G K+ ++ RS    E                  +
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL--------------AV 64

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             D+T T+   + +  + +  G +++LI NAG
Sbjct: 65  KCDITDTEQVEQAYKEIEETHGPVEVLIANAG 96

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 47.5 bits (114), Expect = 1e-06
 Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 17/103 (16%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDR 213
              +  D+T T+   + +  + +  G +++LI NAG        R     +  +      
Sbjct: 61  FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSV------ 114

Query: 214 ELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP 256
              E N+     + + A    L R + G +V+ SS+ G++G+ 
Sbjct: 115 --VETNLTGTFRVVKRANRAML-RAKKGRVVLISSVVGLLGSA 154

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 80.7 bits (200), Expect = 4e-18
 Identities = 45/220 (20%), Positives = 72/220 (32%), Gaps = 66/220 (30%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +KV  ITG + GIGE  A    + GAK+V++       +  + +C   G+     + +
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI---ADDHGQKVCNNIGSPDVISF-V 69

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DVT+ +  R   D  I + G LDI+  N G                         SI 
Sbjct: 70  HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTP------------------YSIL 111

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
               +          F  V+      DI                           NV+  
Sbjct: 112 EAGNED---------FKRVM------DI---------------------------NVYGA 129

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP-YSGSYT 262
             +++ A    +   + G +V T+SI+        S  YT
Sbjct: 130 FLVAKHAARVMIPA-KKGSIVFTASISSFTAGEGVSHVYT 168

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 80.3 bits (199), Expect = 4e-18
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 14/114 (12%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-------NLERVKNLCVQAG-- 94
            + K ++ITGAS GIG A+AL+ ++ GA + ++A+S+         +         AG  
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63

Query: 95  AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
                   L  D+ +    R    A +  FG +DIL+NNA         D  ++
Sbjct: 64  GLA-----LKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMK 112

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 60.7 bits (148), Expect = 4e-11
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           D+ +    R    A +  FG +DIL+NNA         D  ++    + ++N       +
Sbjct: 70  DIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCA 129

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGS--YT 262
           +    + L      H++  +    +  A +     YT
Sbjct: 130 QACLPHLLQAP-NPHILTLAPPPSLNPAWWGAHTGYT 165

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 80.3 bits (199), Expect = 5e-18
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-LERVKNLCVQAGAHPQSIYT 102
           F NK + +TG + GIG A    ++  GA + +  RS+++ +E  + +  + G        
Sbjct: 12  FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV---KTKA 68

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
              DV+ T    +    +    G +  LI NAG
Sbjct: 69  YQCDVSNTDIVTKTIQQIDADLGPISGLIANAG 101

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 79.9 bits (198), Expect = 5e-18
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 15/109 (13%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            ++  + ITGAS  +G   AL+L + G ++++S R+            QAGA       L
Sbjct: 25  LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAGAV-----AL 76

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-------RSQRAAWEDI 145
             D +         D +  Q   L  +++NA          +   +  +
Sbjct: 77  YGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRM 125

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 63.4 bits (155), Expect = 5e-12
 Identities = 13/95 (13%), Positives = 30/95 (31%), Gaps = 2/95 (2%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           D +         D +  Q   L  +++NA         +      R +F +++ +   ++
Sbjct: 79  DFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTR-MFSVHMLAPYLIN 137

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
                  L   +   +V  S      G+    +Y 
Sbjct: 138 LHCEPL-LTASEVADIVHISDDVTRKGSSKHIAYC 171

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 80.3 bits (199), Expect = 5e-18
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYT 102
               V  +TG   GIG  +A  L+  G  + ++    +  +  V       GA    +  
Sbjct: 27  KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA---RVIF 83

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           L  D+     H+   DAV+ +FG +D L+NNAG
Sbjct: 84  LRADLADLSSHQATVDAVVAEFGRIDCLVNNAG 116

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 79.9 bits (198), Expect = 6e-18
 Identities = 46/225 (20%), Positives = 79/225 (35%), Gaps = 65/225 (28%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV +ITGA+ G G A A++L+  GA ++             +LC Q  + P  + T 
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADII-----------AVDLCDQIASVPYPLATP 59

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             ++  T                   L+ + G                          I 
Sbjct: 60  E-ELAATVK-----------------LVEDIGSR------------------------IV 77

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG----RSQRAAWEDIELEVDRELFELN 219
               DV   +       A + + G LDI++ NAG     +    W D+ ++V       N
Sbjct: 78  ARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDV-IDV-------N 129

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDH 264
           +  V    ++A    + +  GG +V+ SS AG+ G   +   +  
Sbjct: 130 LTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVG 174

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 79.8 bits (198), Expect = 6e-18
 Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  +TG +SG+G  +   L   GAK+  S     N    + L  + G   +S++ +
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI---NEAAGQQLAAELGE--RSMF-V 57

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             DV+          AV ++ G L++L+NNAG       E   LE
Sbjct: 58  RHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLE 102

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 68.7 bits (169), Expect = 5e-14
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 18/104 (17%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
            DV+          AV ++ G L++L+NNAG       E   LE    L ++N  SV   
Sbjct: 59  HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESV--- 115

Query: 227 SRIATSYFLA--------REQGGHLVVTSSIAGIVGAPYSGSYT 262
                  F+         +E GG ++  +S++  +       Y+
Sbjct: 116 -------FIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYS 152

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 79.5 bits (197), Expect = 6e-18
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 14/92 (15%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F ++ V +TG + GIG A+A +L+  G K+ ++ R S                P+ ++ +
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS--------------GAPKGLFGV 58

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            +DVT +    R F AV +  G +++L++NAG
Sbjct: 59  EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG 90

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 47.5 bits (114), Expect = 1e-06
 Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 17/103 (16%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDR 213
           ++ + +DVT +    R F AV +  G +++L++NAG        R     +E +      
Sbjct: 55  LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKV------ 108

Query: 214 ELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP 256
                N+     +++ A+     R + G ++   S++G+ G  
Sbjct: 109 --INANLTGAFRVAQRASRSMQ-RNKFGRMIFIGSVSGLWGIG 148

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 78.7 bits (195), Expect = 1e-17
 Identities = 26/217 (11%), Positives = 53/217 (24%), Gaps = 71/217 (32%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYTLTL 105
            +  +T A    G A    L++ G  +V    S ++  ER +      G           
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT---------- 51

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
                +   R  DA +Q    +D +++N    +      +E   + +             
Sbjct: 52  IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEAD------------- 98

Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLS 225
                           + +                                       + 
Sbjct: 99  -------------IRQMFE--------AL-------------------------SIFPIL 112

Query: 226 LSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           L + A +   A   G  ++  +S  G     Y+  Y 
Sbjct: 113 LLQSAIAPLRAAG-GASVIFITSSVGKKPLAYNPLYG 148

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 26/109 (23%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
            +K V +  AS GIG A+A  LS+ GA++ + AR+   L+R  +  V             
Sbjct: 18  RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVC----------- 66

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDI 145
            D+ +        D + ++   +DIL+ NAG              +++ 
Sbjct: 67  -DLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEA 108

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 13/102 (12%), Positives = 33/102 (32%), Gaps = 23/102 (22%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFELN 219
           D+ +        D + ++   +DIL+ NAG              +++          +  
Sbjct: 67  DLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEA--------IDSL 112

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
             +++ + R        +   G +V  +S + I       + 
Sbjct: 113 FLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVISPIENLYTS 153

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 77.7 bits (192), Expect = 3e-17
 Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG--AHPQSIYT 102
           N +V  +TGAS GIG  +ALQL K GA + ++ R    L  V       G    P     
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP----- 58

Query: 103 LTLDVTQTKYHRRCFDAVIQ-QFGCLDILINNAG 135
           +  D +Q    R  F+ V + Q G LD+L+NNA 
Sbjct: 59  VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAY 92

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 45.3 bits (108), Expect = 7e-06
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%)

Query: 168 DVTQTKYHRRCFDAVIQ-QFGCLDILINNAG---RSQRAAWEDIELEVDRELF----ELN 219
           D +Q    R  F+ V + Q G LD+L+NNA    ++          E    ++     + 
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV---GAPYSGS 260
           +      S       +     G +VV SS   +      PY   
Sbjct: 122 LRGHYFCSVYGARLMVPA-GQGLIVVISSPGSLQYMFNVPYGVG 164

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 77.7 bits (192), Expect = 4e-17
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL--ERVKNLCVQAGAHPQSIY 101
              KV  +TG++SGIG  +A  L+  GA +VL+    +    +    L  Q G     + 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV---KVL 58

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               D+++ +  R   D  ++Q G +DIL+NNAG
Sbjct: 59  YDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAG 92

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 77.1 bits (191), Expect = 4e-17
 Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 12/103 (11%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            +   +TG S GIG A+A  L   G ++ +++R+     +        GA P     L  
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ------SLGAVP-----LPT 50

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           D+ +    +      ++  G L +L++ A  + R    ++  E
Sbjct: 51  DLEKDD-PKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYE 92

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 55.2 bits (134), Expect = 3e-09
 Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 4/100 (4%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
           L  D+ +    +      ++  G L +L++ A  + R    ++  E  R +  L++    
Sbjct: 48  LPTDLEKDD-PKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAF 106

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSG--SYT 262
            L++ A  +       G ++   S+            +YT
Sbjct: 107 LLAQAAAPHMAEA-GWGRVLFIGSVTTFTAGGPVPIPAYT 145

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 78.2 bits (193), Expect = 4e-17
 Identities = 34/237 (14%), Positives = 54/237 (22%), Gaps = 65/237 (27%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
              V  +TGA+  +G ++A  L   G  + L    S            A A         
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----------AAEA--------- 84

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
                        +A+         L      S      D+       +           
Sbjct: 85  -------------NALSAT------LNARRPNSAITVQADLSNVATAPVSGADGSA---- 121

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWE------DIELE 210
               VT          A    +G  D+L+NNA         R+     E      +    
Sbjct: 122 ---PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMET 178

Query: 211 VDRELFELNVFSVLSLSRIATSYFLA-----REQGGHLVVTSSIAGIVGAPYSGSYT 262
              +LF  N  +   L +             R     ++                YT
Sbjct: 179 ATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 235

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 77.6 bits (192), Expect = 5e-17
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
           +  VV +TG S GIG A+    ++ G ++ ++ A +    + V     ++G   +++  +
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGG--EAV-AI 81

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV         F AV +QFG LD L+NNAG
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAG 113

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 61.4 bits (150), Expect = 3e-11
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 5/99 (5%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW-EDIELEVDRELFELNVFSVLSL 226
           DV         F AV +QFG LD L+NNAG        +++ +E    +  +NV   +  
Sbjct: 84  DVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILC 143

Query: 227 SRIATSYFLAR--EQGGHLVVTSSIAGIVGAPYSGSYTD 263
           +  A          QGG +V  SS+A I+G+     Y D
Sbjct: 144 AAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA--TQYVD 180

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 77.8 bits (192), Expect = 6e-17
 Identities = 34/237 (14%), Positives = 54/237 (22%), Gaps = 65/237 (27%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
              V  +TGA+  +G ++A  L   G  + L    S            A A         
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----------AAEA--------- 47

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
                        +A+         L      S      D+       +           
Sbjct: 48  -------------NALSAT------LNARRPNSAITVQADLSNVATAPVSGADGSA---- 84

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWE------DIELE 210
               VT          A    +G  D+L+NNA         R+     E      +    
Sbjct: 85  ---PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMET 141

Query: 211 VDRELFELNVFSVLSLSRIATSYFLA-----REQGGHLVVTSSIAGIVGAPYSGSYT 262
              +LF  N  +   L +             R     ++                YT
Sbjct: 142 ATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 198

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 77.7 bits (192), Expect = 6e-17
 Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 9/110 (8%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN--LERVKNLCVQAGAHPQSIYT 102
                 +TGA+  IG A+A++L + G ++V+   +S+   +     L  +      +   
Sbjct: 22  EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN---TAVV 78

Query: 103 LTLDVTQTKYH----RRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
              D+T +           ++  + FG  D+L+NNA           + E
Sbjct: 79  CQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHE 128

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 77.3 bits (191), Expect = 7e-17
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 15/104 (14%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVL------------SARSSSNLERVKNLCV 91
             +KVV +TG + G G + A++L++ GA ++L               +S +LE       
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 92  QAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           + G      YT  +DV       R     + +FG LD+++ NAG
Sbjct: 68  KTGR---KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAG 108

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 76.8 bits (190), Expect = 9e-17
 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
            NKV  +TGAS GIG A+A +L+  G  +V++ A  ++  E V      AG       T 
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGK---ALTA 82

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             DV+     RR F    + FG +D+L+NNAG        +    
Sbjct: 83  QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDA 127

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 61.0 bits (149), Expect = 3e-11
 Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 3/95 (3%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           DV+     RR F    + FG +D+L+NNAG        +    V   +  +N+    +  
Sbjct: 85  DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTL 144

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           R A         GG ++  S+    +  P  G Y 
Sbjct: 145 REAAQRL---RVGGRIINMSTSQVGLLHPSYGIYA 176

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 76.8 bits (190), Expect = 1e-16
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 6/106 (5%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLS--ARSSSNLERVKNLCVQAGAHPQSIYTL 103
           ++   +TG  SGIG A A+  ++ GA + ++       + ++VK L  + G   +    L
Sbjct: 49  DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG---RKAVLL 105

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELE 148
             D++   + R       +  G LDIL   AG+       +D+  E
Sbjct: 106 PGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSE 151

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 68.7 bits (169), Expect = 9e-14
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 4/96 (4%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFELNVFSVLSL 226
           D++   + R       +  G LDIL   AG+       +D+  E  ++ F +NVF++  +
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWI 167

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           ++ A        +G  ++ TSSI     +P+   Y 
Sbjct: 168 TQEAIPLL---PKGASIITTSSIQAYQPSPHLLDYA 200

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 76.5 bits (189), Expect = 1e-16
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 4/105 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
             KV   TGA  GIG  +A++L + GA +V++   SS   E V     + GA       +
Sbjct: 20  AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---GVAI 76

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             D+++       FD  +  FG LD +++N+G        ++  E
Sbjct: 77  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQE 121

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 75.8 bits (187), Expect = 1e-16
 Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 16/106 (15%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +K + + G S  +G  +           +                     +P + ++ 
Sbjct: 20  HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFR---------------ENPNADHSF 64

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELE 148
           T+  +  +  +   + +  +   +D  +  AG  S   A  D  L+
Sbjct: 65  TIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLK 110

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 73.9 bits (182), Expect = 7e-16
 Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 4/99 (4%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSV 223
            T+  +  +  +   + +  +   +D  +  AG  S   A  D  L+  + + ++N++S 
Sbjct: 64  FTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSA 123

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            + + I         QGG  V+T + A +       +Y 
Sbjct: 124 FASAHIGAKLL---NQGGLFVLTGASAALNRTSGMIAYG 159

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 75.7 bits (187), Expect = 2e-16
 Identities = 36/227 (15%), Positives = 58/227 (25%), Gaps = 62/227 (27%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
                 ITG +  IG ++A++L + G ++V+    S    +R+      A     S    
Sbjct: 10  ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLC 67

Query: 104 TLDVTQ----TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
             D++             D   + FG  D+L+NNA                         
Sbjct: 68  KGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNAS------------------------ 103

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
                                            +     +  AA          ELF  N
Sbjct: 104 -----------------------AYYPT----PLLPGDDTNGAADAKPIDAQVAELFGSN 136

Query: 220 VFSVLSLSRIATSYFLA----REQGGHLVVTSSIAGIVGAPYSGSYT 262
             + L L R            R +   +V        +  P    YT
Sbjct: 137 AVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYT 183

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 8/111 (7%)

Query: 45  NNKVVWITGASSGIGEALALQL-SKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              V  +TG + GIG A+   L       +VL+AR  +  +         G  P+     
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ-- 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
            LD+   +  R   D + +++G LD+L+NNAG     A++  +        
Sbjct: 61  -LDIDDLQSIRALRDFLRKEYGGLDVLVNNAG----IAFKVADPTPFHIQA 106

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 75.2 bits (186), Expect = 3e-16
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 12/105 (11%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + KV+ +T A+ GIG+A AL  ++ GAK++ +  + S L+ ++      G       T 
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK---YPGIQ-----TR 55

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            LDVT+ K      D    +   LD+L N AG        D E +
Sbjct: 56  VLDVTKKK----QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEK 96

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 57.9 bits (141), Expect = 3e-10
 Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 9/120 (7%)

Query: 144 DIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 203
           DI     +EL      P I T  LDVT+ K      D    +   LD+L N AG      
Sbjct: 37  DINESKLQEL---EKYPGIQTRVLDVTKKK----QIDQFANEVERLDVLFNVAGFVHHGT 89

Query: 204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-GAPYSGSYT 262
             D E +       LNV S+  + +      LA+ + G+++  SS+A  V G      Y+
Sbjct: 90  VLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVKGVVNRCVYS 148

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 75.3 bits (186), Expect = 3e-16
 Identities = 35/220 (15%), Positives = 57/220 (25%), Gaps = 71/220 (32%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
            V+ ITG++SGIG AL   L++ G  ++   R  +++E                     D
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------------D 41

Query: 107 VTQTKYHRRCFDAVIQQFG-CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
           ++          AV+ + G  LD L+  AG                              
Sbjct: 42  LSTPGGRETAVAAVLDRCGGVLDGLVCCAG------------------------------ 71

Query: 166 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELEVDRELFELNVFSV 223
                           V      L + +N  G         E +          +   + 
Sbjct: 72  --------------VGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP---YSGS 260
                       A    G       +A   G     Y+GS
Sbjct: 118 TQPGAAELPMVEAM-LAGDEARAIELAEQQGQTHLAYAGS 156

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 75.7 bits (187), Expect = 3e-16
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 4/105 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
             KV  +TGA  GIG  +A++L + G K++++ A S+ + E V     + G+    +   
Sbjct: 28  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACV--- 84

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             +V   +   R F+  ++ FG LDI+ +N+G       +D+  E
Sbjct: 85  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPE 129

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 59.9 bits (146), Expect = 9e-11
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 8/98 (8%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           +V   +   R F+  ++ FG LDI+ +N+G       +D+  E    +F +N      ++
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146

Query: 228 RIATSYFLAREQGGHLVVTSSIAGIVG-----APYSGS 260
           R A  +    E GG L++  SI G        A YSGS
Sbjct: 147 REAYKHL---EIGGRLILMGSITGQAKAVPKHAVYSGS 181

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 75.3 bits (186), Expect = 3e-16
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT 102
              K  ++TG S GIG A+A +L+  GA + L+   ++   + V +   QAG    +I  
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR- 87

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
              D    +   +     ++  G LDIL+N+AG    A  E+  + 
Sbjct: 88  --ADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVA 131

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 61.4 bits (150), Expect = 2e-11
 Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           D    +   +     ++  G LDIL+N+AG    A  E+  +    E+  +N  +     
Sbjct: 89  DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAI 148

Query: 228 RIATSYFLAREQGGHLV-VTSSIAGIVGAPYSGSYT 262
           R A+ +      GG ++ + S++A +V  P    Y+
Sbjct: 149 RSASRHL---GDGGRIITIGSNLAELVPWPGISLYS 181

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 74.9 bits (185), Expect = 5e-16
 Identities = 38/231 (16%), Positives = 62/231 (26%), Gaps = 78/231 (33%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVL------------SARSSSNLERVKNLCV 91
           F  K   ITG + G+G + A+ L++ GA + +               ++ +L     L  
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67

Query: 92  QAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
           + G   +   +  +DV                 G +DI I NAG S  A   ++E     
Sbjct: 68  KTG---RRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQ-- 122

Query: 152 ELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 211
                                      +D VI                            
Sbjct: 123 ---------------------------WDEVI------GT-------------------- 129

Query: 212 DRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
                  N+    +         + R   G +V  SS+ G        SY 
Sbjct: 130 -------NLTGTFNTIAAVAPGMIKR-NYGRIVTVSSMLGHSANFAQASYV 172

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 76.2 bits (188), Expect = 5e-16
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 7/93 (7%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + KV  +TGA+ GIG  +A   ++ GA +V      +  E +K +  + G        L
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKVGGTA-----L 264

Query: 104 TLDVTQTKYHRRCFDAVIQQFGC-LDILINNAG 135
           TLDVT      +    V +  G  +DIL+NNAG
Sbjct: 265 TLDVTADDAVDKITAHVTEHHGGKVDILVNNAG 297

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 45.4 bits (108), Expect = 9e-06
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 18/99 (18%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGC-LDILINNAG--------RSQRAAWEDIELEVDREL 215
           LTLDVT      +    V +  G  +DIL+NNAG              W+ + + V    
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAV-IAV---- 318

Query: 216 FELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG 254
              N+ +   L+           +GG ++  SS+AGI G
Sbjct: 319 ---NLLAPQRLTEGLVGNGT-IGEGGRVIGLSSMAGIAG 353

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 74.5 bits (184), Expect = 6e-16
 Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 4/105 (3%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTL 103
           + KV  +TG+  GIG A+A+ L + GAK+V++ A S+ + E+V +     G+   +I   
Sbjct: 17  DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA- 75

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             D+ Q     + FD  +  FG LDI ++N+G       +D+  E
Sbjct: 76  --DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEE 118

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 60.7 bits (148), Expect = 4e-11
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLS 227
           D+ Q     + FD  +  FG LDI ++N+G       +D+  E    +F LN      ++
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135

Query: 228 RIATSYFLAREQGGHLV-VTSSIAGIVGAPYSGSYT 262
           R A  +     +GG +V  +S+ +     P    Y+
Sbjct: 136 REAYRHL---TEGGRIVLTSSNTSKDFSVPKHSLYS 168

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 72.9 bits (180), Expect = 1e-15
 Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 14/105 (13%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
                  +TG S GIG+A+   L +     V++     +               +++  +
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA------------ENLKFI 49

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
             D+T+ +      D +  +    D +  NAG   + +  DI++E
Sbjct: 50  KADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIE 92

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 60.2 bits (147), Expect = 4e-11
 Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSL 226
            D+T+ +      D +  +    D +  NAG   + +  DI++E  +++ +LNV+S +  
Sbjct: 51  ADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYF 108

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            +   +     + G  +V   S    +  P S +YT
Sbjct: 109 IKGLENNL---KVGASIVFNGSDQCFIAKPNSFAYT 141

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 72.6 bits (179), Expect = 2e-15
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 7/95 (7%)

Query: 45  NNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSN--LERVKNLCVQAGAHPQSI 100
             KVV +TGAS   G+G   A   ++ GA + ++  S +    E VK L    G      
Sbjct: 19  KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI---KA 75

Query: 101 YTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
                 V   +   +    V+  FG +D  I NAG
Sbjct: 76  KAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAG 110

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 72.7 bits (178), Expect = 4e-15
 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 5/95 (5%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYTL 103
             +   +TG + GIG  +  QLS  G  +VL+ R  +     V+ L     ++ +++   
Sbjct: 11  KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL---KNSNHENVVFH 67

Query: 104 TLDVTQTKYHRRCF-DAVIQQFGCLDILINNAGRS 137
            LDVT          D +   FG LDIL+NNAG +
Sbjct: 68  QLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVA 102

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 71.9 bits (177), Expect = 5e-15
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             ++V  +TGASSG+G A+   L++ GA ++         E        A     ++   
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEP------AAELGAAVRFR 58

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DVT             Q+FG +  L+N AG
Sbjct: 59  NADVTNEADATAALAFAKQEFGHVHGLVNCAG 90

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 49.1 bits (118), Expect = 3e-07
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 13/106 (12%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFE--LNV----- 220
           DVT             Q+FG +  L+N AG +              + F   + V     
Sbjct: 61  DVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120

Query: 221 FSVLSLS--RIATSYFLAREQGGHLVVTSSIAGIVG----APYSGS 260
           F+++ L+   ++     A  + G +V T+SIA   G    A Y+ S
Sbjct: 121 FNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAAS 166

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 72.2 bits (178), Expect = 6e-15
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 5/105 (4%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLT 104
            K V ITG  SGIG A+++  +K GA + ++      +    K    + G        L 
Sbjct: 47  GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG---VKCVLLP 103

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RAAWEDIELE 148
            D++  ++ +      ++Q G L+IL+NN  +   +   E I  E
Sbjct: 104 GDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAE 148

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 61.8 bits (151), Expect = 2e-11
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RAAWEDIELEVDRELFELNVFSVLSL 226
           D++  ++ +      ++Q G L+IL+NN  +   +   E I  E   + F +N+FS   +
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHV 164

Query: 227 SRIATSYFLAREQGGHLVVTSSIAGIVGAP 256
           ++ A S+    +QG  ++ T+SI    G  
Sbjct: 165 TKAALSHL---KQGDVIINTASIVAYEGNE 191

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 71.5 bits (176), Expect = 7e-15
 Identities = 38/223 (17%), Positives = 66/223 (29%), Gaps = 66/223 (29%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F      ++G + G+GEA   +L   G  +V++       E+ K L  + G   + + T 
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADL---AAEKGKALADELGNRAEFVST- 83

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             +VT         +A  Q       ++ + G             V R+           
Sbjct: 84  --NVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQ------RIVQRDG---------S 126

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
              +           F   I         +   G                       ++V
Sbjct: 127 PADMGG---------FTKTID--------LYLNG----------------------TYNV 147

Query: 224 LSLS--RIATSYFLAREQGGHLVVTSSIAGIVG----APYSGS 260
             L    IA +      + G LV+T+SIAG  G      Y+ +
Sbjct: 148 ARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAA 190

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 71.1 bits (175), Expect = 8e-15
 Identities = 44/223 (19%), Positives = 71/223 (31%), Gaps = 67/223 (30%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
              V  ITG +SG+G A A +L   GA  VL           +    + G +        
Sbjct: 11  KGLVAVITGGASGLGLATAERLVGQGASAVLLDL---PNSGGEAQAKKLGNNCVFAPA-- 65

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
            DVT  K  +        +FG +D+ +N AG +  +                        
Sbjct: 66  -DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVAS------------------------ 100

Query: 165 LTLDVTQTKYHRR-CFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
            T ++ + + H    F  V+         +N  G                       F+V
Sbjct: 101 KTYNLKKGQTHTLEDFQRVLD--------VNLMG----------------------TFNV 130

Query: 224 LSLS--RIATSYFLAREQGGHLVVTSSIAGIVG----APYSGS 260
           + L    +  +      Q G ++ T+S+A   G    A YS S
Sbjct: 131 IRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSAS 173

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 68.7 bits (169), Expect = 6e-14
 Identities = 38/231 (16%), Positives = 70/231 (30%), Gaps = 76/231 (32%)

Query: 38  NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP 97
           N  L     KV  +TGAS GIG A+A +L+  GA + +   +            +  A  
Sbjct: 2   NSMLK---GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR-----------KEEA-- 45

Query: 98  QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYA 157
                               +  + +       I + G    A                 
Sbjct: 46  --------------------EETVYE-------IQSNGG--SAF---------------- 60

Query: 158 YRPSIYTLTLDVTQTKYHRRCFDAVIQQF------GCLDILINNAGRSQRAAWEDIELEV 211
                 ++  ++         + ++  +          DILINNAG    A  E+   + 
Sbjct: 61  ------SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQF 114

Query: 212 DRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
              +  +N  +   + + A S          ++  SS A  +  P   +Y+
Sbjct: 115 FDRMVSVNAKAPFFIIQQALSRL---RDNSRIINISSAATRISLPDFIAYS 162

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 68.6 bits (168), Expect = 1e-13
 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 13/102 (12%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLV----------LSARSSSNLERVKNLCVQA 93
            + +VV +TGA  GIG A AL  +  GA++V            A   S  + V +    A
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84

Query: 94  GAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           G    +  +   +V             ++ FG LD+L+NNAG
Sbjct: 85  GGEAVADGS---NVADWDQAAGLIQTAVETFGGLDVLVNNAG 123

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 48.5 bits (116), Expect = 6e-07
 Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 21/102 (20%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAG--------RSQRAAWEDIELEVDRELFELN 219
           +V             ++ FG LD+L+NNAG         +    ++ + + V       +
Sbjct: 94  NVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAV-IAV-------H 145

Query: 220 VFSVLSLSRIATSYFLAREQ-----GGHLVVTSSIAGIVGAP 256
           +    +  R A +Y+    +      G ++ TSS AG+ G+ 
Sbjct: 146 LKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSV 187

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 64.6 bits (158), Expect = 7e-13
 Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
            +T+D+T     ++ ++    Q G +D +++  G +  +   ++  E +       +   
Sbjct: 38  DVTVDITNIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQ 93

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           ++L  +           G   +T+ I          S  
Sbjct: 94  INLVLLGIDSL---NDKGSFTLTTGIMMEDPIVQGASAA 129

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 60.4 bits (147), Expect = 3e-11
 Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 25/104 (24%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           N   + + GAS  +G A+  +L K  A+++ + R S                      +T
Sbjct: 2   NAMKILLIGASGTLGSAVKERLEK-KAEVITAGRHSG--------------------DVT 40

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           +D+T     ++ ++    Q G +D +++  G +  +   ++  E
Sbjct: 41  VDITNIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPE 80

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 21/105 (20%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
            ++ I+G ++GIG A    L   G ++V      +                     +  D
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA--------------------EVIAD 41

Query: 107 VTQTKYHRRCFDAVIQQ-FGCLDILINNAGRSQRAAWEDIELEVD 150
           ++  +  ++    V+ +    +D L+  AG   +       + V+
Sbjct: 42  LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVN 86

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 48.1 bits (115), Expect = 6e-07
 Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 11/95 (11%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQ-FGCLDILINNAGRSQRAA-WEDIELEVDRELFELNVFS 222
           +  D++  +  ++    V+ +    +D L+  AG   +     ++          +N F 
Sbjct: 38  VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNV--------VSVNYFG 89

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY 257
              L        L +      VV SS+A    A  
Sbjct: 90  ATELMDAFLPA-LKKGHQPAAVVISSVASAHLAFD 123

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 63.9 bits (156), Expect = 4e-12
 Identities = 43/233 (18%), Positives = 78/233 (33%), Gaps = 90/233 (38%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVL---------SARSSSNLERVKNLCVQAG 94
           F+ +VV +TGA  G+G A AL  ++ GA +V+           + SS  ++V     + G
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66

Query: 95  AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
               + Y     V       +     +  FG +D+++NNAG  +  ++  I  E      
Sbjct: 67  GKAVANYD---SVEAG---EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDED----- 115

Query: 155 TYAYRPSIYTLTLDVTQTKYHRRCFDAVIQ-----QFGCLDILINNAGRSQRAAWEDIEL 209
                                   +D + +      F              RAAW+    
Sbjct: 116 ------------------------WDIIQRVHLRGSFQVT-----------RAAWD---- 136

Query: 210 EVDRELFELNVFSVLSLSRIATSYFLAREQG-GHLVVTSSIAGIVGAPYSGSY 261
                                  +   ++Q  G +++T+S +GI G     +Y
Sbjct: 137 -----------------------HM--KKQNYGRIIMTASASGIYGNFGQANY 164

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 64.7 bits (158), Expect = 5e-12
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 15/101 (14%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVL---------SARSSSNLERVKNLCVQAG 94
           F +KVV ITGA  G+G+  +L+ +K GAK+V+            +S   + V +  V+ G
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65

Query: 95  AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               + Y    +V       +  +  ++ FG + ++INNAG
Sbjct: 66  GVAVADYN---NVLDGD---KIVETAVKNFGTVHVIINNAG 100

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 3/83 (3%)

Query: 180 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ 239
           +  ++ FG + ++INNAG  + A+ + +  +  + + ++++    ++++ A  YF  ++Q
Sbjct: 83  ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYF--QKQ 140

Query: 240 G-GHLVVTSSIAGIVGAPYSGSY 261
             G +V TSS AG+ G     +Y
Sbjct: 141 KYGRIVNTSSPAGLYGNFGQANY 163

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 52.8 bits (127), Expect = 4e-08
 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 7/84 (8%)

Query: 180 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ 239
             VI ++G +DIL+NNAG  +  ++  +  +    + ++++    +LSR+A  YF   E+
Sbjct: 387 KNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYF--VEK 444

Query: 240 G-GHLVVTSSIAGIVG----APYS 258
             G ++  +S +GI G    A YS
Sbjct: 445 QFGRIINITSTSGIYGNFGQANYS 468

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +KVV ITGA +G+G+  A   +K GAK+V++     +  +  +    AG         
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVN--DFKDATKTVDEIKAAGGEAWPDQH- 376

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             DV +          VI ++G +DIL+NNAG
Sbjct: 377 --DVAKDS--EAIIKNVIDKYGTIDILVNNAG 404

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 12/120 (10%)

Query: 45  NNKVVWITGASSGIGEALALQLSKC---GAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           +   + ITG + G+G  L   L         L  + R+    + +++L   A  H  +I+
Sbjct: 20  HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL---AKNHS-NIH 75

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFG--CLDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
            L +D+     + +    +        L++L NNAG + +     I   V  +      +
Sbjct: 76  ILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPK--SARIT-AVRSQELLDTLQ 132

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 18/115 (15%), Positives = 37/115 (32%), Gaps = 13/115 (11%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFG--CLDILINNAG-RSQRAAWEDIELEVDRELF 216
            +I+ L +D+     + +    +        L++L NNAG   + A    +  +   +  
Sbjct: 72  SNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTL 131

Query: 217 ELNVFSVLSL----------SRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           + N    + L          +  A            ++  SSI G +     G  
Sbjct: 132 QTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGM 186

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 10/91 (10%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
            + V  +TG +SG+G A   +L   GA++V+      ++  V +L  +A           
Sbjct: 8   RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VADLGDRARFAA------- 58

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
            DVT         D   +  G L I++N AG
Sbjct: 59  ADVTDEAAVASALDLA-ETMGTLRIVVNCAG 88

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 16/108 (14%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFE----LNVFSV 223
           DVT         D   +  G L I++N AG          +       F     +N+   
Sbjct: 60  DVTDEAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118

Query: 224 LSLSRIATSYFLARE-------QGGHLVVTSSIAGIVG----APYSGS 260
            ++ R+A       E       + G ++ T+S+A   G    A YS S
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSAS 166

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 13/118 (11%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              V +TGA+ GIG  L  QL K      ++ +AR       +K++          ++ L
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI------KDSRVHVL 56

Query: 104 TLDVTQTKYHRRCFDAVIQQFGC--LDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
            L VT  K        V +  G   L +LINNAG            E +R +      
Sbjct: 57  PLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLS---YGTNTEPNRAVIAEQLD 111

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 59.6 bits (145), Expect = 7e-11
 Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 8/102 (7%)

Query: 165 LTLDVTQTKYHRRCFDAVIQ--QFGCLDILINNAG--RSQRAAWEDIELEVDRELFELNV 220
           +  +   T+  +   +      Q   +D +   AG      A+ +D     D  + + +V
Sbjct: 47  VDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADL-MIKQSV 105

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           +S    +++AT++    + GG L +T + A +   P    Y 
Sbjct: 106 WSSAIAAKLATTHL---KPGGLLQLTGAAAAMGPTPSMIGYG 144

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 58.9 bits (143), Expect = 1e-10
 Identities = 15/122 (12%), Positives = 38/122 (31%), Gaps = 14/122 (11%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           +  V + G    +G A+     K G  ++    S+++        +    +         
Sbjct: 3   SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---SNILVDGN--------K 51

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
           + T+ +       A   Q   +D +   AG     A      +   +      + S+++ 
Sbjct: 52  NWTEQEQSILEQTASSLQGSQVDGVFCVAG---GWAGGSASSKDFVKNADLMIKQSVWSS 108

Query: 166 TL 167
            +
Sbjct: 109 AI 110

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 59.5 bits (145), Expect = 7e-11
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 16/90 (17%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            +   +TG +SG+G A AL L   G ++V+        E    + V+             
Sbjct: 2   ERSALVTGGASGLGRAAALALKARGYRVVVLDL---RREGEDLIYVEG------------ 46

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           DVT+ +  RR      Q+   L  +++ AG
Sbjct: 47  DVTREEDVRRAVARA-QEEAPLFAVVSAAG 75

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 14/106 (13%)

Query: 168 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF----ELNVFSV 223
           DVT+ +  RR      Q+   L  +++ AG          E     E F    E+N+   
Sbjct: 47  DVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGT 105

Query: 224 LSLSRIATSYFLARE-----QGGHLVVTSSIAGIVG----APYSGS 260
            ++ R+A             Q G +V T+S+A   G    A Y+ S
Sbjct: 106 FNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAAS 151

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP-QSIYTLTL 105
           + V ITGA+SG+G   A +L++ GA ++++ R   +  +       A       +    L
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVR---DTRK----GEAAARTMAGQVEVREL 69

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
           D+      RR  D         D+LINNAG
Sbjct: 70  DLQDLSSVRRFAD----GVSGADVLINNAG 95

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 23/105 (21%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVL---------SARSSSNLERVKNLCVQAG 94
           ++ +V  +TGA +G+G   AL  ++ GAK+V+            S    + V +   +AG
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG 76

Query: 95  ----AHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
               A   S+              +  +  I+ FG +DIL+NNAG
Sbjct: 77  GEAVADYNSVID----------GAKVIETAIKAFGRVDILVNNAG 111

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 51.7 bits (124), Expect = 8e-08
 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 180 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ 239
           +  I+ FG +DIL+NNAG  +  +      +    + ++++      ++ A  Y   ++Q
Sbjct: 94  ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYM--KKQ 151

Query: 240 G-GHLVVTSSIAGIVGAPYSGSY 261
             G +++TSS +GI G     +Y
Sbjct: 152 NYGRIIMTSSNSGIYGNFGQVNY 174

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 14/84 (16%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 180 DAVIQQFGCLDILINNAG-RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE 238
              +     +D ++  AG  +   A      +    +++ ++++    S +AT +    +
Sbjct: 68  VGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL---K 124

Query: 239 QGGHLVVTSSIAGIVGAPYSGSYT 262
           +GG L +  + A + G P    Y 
Sbjct: 125 EGGLLTLAGAKAALDGTPGMIGYG 148

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 10/110 (9%), Positives = 26/110 (23%), Gaps = 13/110 (11%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              + V + G    +G             +       +       +     +  +    +
Sbjct: 5   GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQV 64

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RSQRAAWEDIELEVDR 151
           T +V             +     +D ++  AG      A  + +    D 
Sbjct: 65  TAEV-----------GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDL 103

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 50.3 bits (120), Expect = 1e-07
 Identities = 9/92 (9%), Positives = 23/92 (25%), Gaps = 11/92 (11%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              K   +   +  +G   A  L+  GA++VL  R     +   +   +       +   
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK----VNVT 172

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAG 135
             +            +  +       +     
Sbjct: 173 AAETA-------DDASRAEAVKGAHFVFTAGA 197

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 5e-07
 Identities = 41/264 (15%), Positives = 76/264 (28%), Gaps = 72/264 (27%)

Query: 14  YIIVQGLF-----LLAVD-CDLYLFFIEKINKRLNYFNNKVVWITGASSGIGEALALQLS 67
            +++ G+       +A+D C  Y        K     + K+ W+   +    E +   L 
Sbjct: 152 NVLIDGVLGSGKTWVALDVCLSY--------KVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203

Query: 68  KCGAKLVLS----ARSSSNL--------ERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRR 115
           K   ++  +    +  SSN+          ++ L      +   +  L L   Q      
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP-YENCL--LVLLNVQNAKAWN 260

Query: 116 CFDAVIQQFGCLDILI-----NNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVT 170
            F+       C  IL+             A    I L+      T     S+    LD  
Sbjct: 261 AFN-----LSC-KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR 314

Query: 171 QTKYHRRCFDA---VIQQFGCLDILINNAGRSQRAAWED---------IELEVD------ 212
                R         +        + +         W+          IE  ++      
Sbjct: 315 PQDLPREVLTTNPRRLSIIAES--IRDGLATWDN--WKHVNCDKLTTIIESSLNVLEPAE 370

Query: 213 -RELFE-LNVF--------SVLSL 226
            R++F+ L+VF         +LSL
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSL 394

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 42.6 bits (101), Expect = 5e-05
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 4/124 (3%)

Query: 45  NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
            NK   I G ++   I   +A  L + GAKLV + R   + + ++ L  Q       +  
Sbjct: 31  ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHL-- 88

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
             +DV   +     F+ + +  G +D + ++   +          E  RE F  A   S 
Sbjct: 89  YQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISS 148

Query: 163 YTLT 166
           Y+LT
Sbjct: 149 YSLT 152

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 27/138 (19%), Positives = 58/138 (42%), Gaps = 6/138 (4%)

Query: 31  LFFIEKINKRLNYFNNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKN 88
             F  K    +     K   ITG ++   I   +A    + GA+L  +  +    +RV+ 
Sbjct: 6   SKFSNKGEVFMGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVRE 65

Query: 89  LCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
           +    G+       +  DV+  +  +     + + +G LDI++++   + +  ++   ++
Sbjct: 66  IAKGFGSD----LVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVID 121

Query: 149 VDRELFTYAYRPSIYTLT 166
             RE F  A   S+Y+L 
Sbjct: 122 TSREGFKIAMDISVYSLI 139

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 6/124 (4%)

Query: 45  NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
           + K   + G ++   +G A+A +L + GA++ LS ++       + L    G        
Sbjct: 7   SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGA----LL 62

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
              DVTQ +     F  V + FG LD L++    + R A E   ++  R+ +  A   S 
Sbjct: 63  FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSA 122

Query: 163 YTLT 166
           Y+L 
Sbjct: 123 YSLV 126

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 10/50 (20%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 48  VVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAH 96
            V    ++SG+G+A  +Q++   G + +   R   +++++ +     GA 
Sbjct: 170 SVIQNASNSGVGQA-VIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAE 218

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 4/124 (3%)

Query: 45  NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
             + + + G ++   I   +A  L + GA+L+ +       + V  L      +      
Sbjct: 6   EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRN--DSII 63

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
           L  DVT       CF ++ +Q G +  + +    + +       L  +R+ F  A+  S 
Sbjct: 64  LPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISS 123

Query: 163 YTLT 166
           Y+LT
Sbjct: 124 YSLT 127

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 45  NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
             K   I G ++   I   +A      GA L  +  + S  +RV+ +  +  +     Y 
Sbjct: 5   KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSP----YV 60

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
             LDV++ ++ +  +++V +  G LD ++++   + + A E   LE  +  F  A   S+
Sbjct: 61  YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISV 120

Query: 163 YTLT 166
           Y+L 
Sbjct: 121 YSLI 124

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 39.5 bits (93), Expect = 6e-04
 Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 6/124 (4%)

Query: 45  NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
             K   I G ++   +   +A  +   GA++ L+  S +  +RV  L    G       T
Sbjct: 29  EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVK----LT 84

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
           +  DV+  +     F  + +++G LD +++    S +   +   ++     F  +   S 
Sbjct: 85  VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISC 144

Query: 163 YTLT 166
           Y+ T
Sbjct: 145 YSFT 148

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 6/124 (4%)

Query: 45  NNKVVWITGASSG--IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
             K   I G ++   I   +A    + GA+L  + +  +  +RV+ L  + GA       
Sbjct: 30  QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAF----VA 85

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
              DV         F+ + +++G LD L++  G S +       ++     FT     S+
Sbjct: 86  GHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISV 145

Query: 163 YTLT 166
           Y+LT
Sbjct: 146 YSLT 149

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	265
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.98
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.97
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.97
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.97
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.97
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.97
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.97
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.97
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.97
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.97
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.97
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.97
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.97
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.97
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.97
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.97
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.97
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.97
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.97
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.97
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.97
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.97
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.97
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.97
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.97
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.97
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.97
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.97
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.97
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.97
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.97
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.97
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.97
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.97
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.97
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.97
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.97
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.97
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.97
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.97
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.97
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.97
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.97
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.97
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.97
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.97
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.97
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.97
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.97
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.96
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.96
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.96
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.96
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.96
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.96
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.96
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.96
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.96
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.96
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.96
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.96
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.96
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.96
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.96
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.96
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.96
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.96
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.96
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.96
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.96
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.96
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.96
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.96
1spx_A	278	Short-chain reductase family member (5L265); paral	99.96
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.96
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.96
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.96
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.96
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.96
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.96
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.96
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.96
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.96
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.96
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.96
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.96
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.96
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.96
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.96
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.96
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.96
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.96
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.96
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.96
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.96
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.96
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.96
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.96
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.96
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.96
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.96
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.96
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.96
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.96
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.96
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.96
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.96
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.96
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.95
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.95
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.95
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.95
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.95
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.95
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.95
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.95
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.95
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.95
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.95
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.95
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.95
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.95
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.95
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.95
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.95
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.95
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.95
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.95
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.95
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.95
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.95
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.95
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.95
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.95
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.95
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.95
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.95
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.95
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.95
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.95
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.95
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.95
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.95
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.95
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.95
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.95
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.95
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.94
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.94
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.94
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.94
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.94
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.94
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.94
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.94
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.94
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.94
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.94
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.94
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.94
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.94
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.94
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.94
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.94
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.94
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.94
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.93
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.93
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.93
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.93
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.93
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.93
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.93
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.93
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.93
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.93
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.93
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.93
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.93
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.93
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.92
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.92
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.92
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.92
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.92
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.92
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.91
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.91
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.91
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.91
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.9
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.89
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.89
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.89
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.87
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.86
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.86
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.86
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.85
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.84
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.82
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.8
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.79
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.73
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.7
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.68
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.68
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.67
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.67
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.64
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.64
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.64
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.63
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.63
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.63
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.62
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.61
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.61
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.61
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.61
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.6
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.59
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.59
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.59
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.59
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.58
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.58
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.57
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.56
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.56
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.56
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.54
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.54
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.54
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.53
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.53
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.53
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.53
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.52
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.52
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.52
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.5
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.5
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.49
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.49
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.48
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.47
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.47
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.47
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.46
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.46
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.46
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.45
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.45
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.45
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.44
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.44
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.43
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.43
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.43
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.42
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.42
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.41
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.39
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.38
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.33
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.32
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.32
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.32
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.3
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.29
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.28
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.27
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.26
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.24
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.18
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.17
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.16
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.16
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.12
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.09
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.09
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.06
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.04
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.03
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.97
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.93
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	98.93
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	98.93
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	98.92
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.91
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.9
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.89
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.85
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.85
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.69
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.62
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.62
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.57
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.56
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.53
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.47
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.35
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.29
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.29
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.27
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.27
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.23
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.18
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.16
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.15
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.11
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.11
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.1
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.1
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.09
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.09
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.08
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.06
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.94
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.94
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.93
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.91
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	97.89
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.82
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.81
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.81
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.76
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.75
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.73
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.72
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.7
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.67
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.66
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.65
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.64
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.59
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.57
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.55
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.54
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.47
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.46
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	97.43
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.41
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.4
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.38
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.37
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.36
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.36
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.34
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.27
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.18
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.14
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.13
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.13
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	97.07
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.03
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	97.01
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.01
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.98
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.96
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	96.96
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.95
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.93
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.92
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.92
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.91
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.88
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.86
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.86
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.85
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.82
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.82
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.81
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.81
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.8
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.79
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.77
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.76
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.76
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.75
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.73
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.73
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.72
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.71
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.71
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.71
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.7
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.68
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.68
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.67
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.66
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.66
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.65
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.65
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	96.64
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.64
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.63
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.61
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.61
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.61
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.6
1lnq_A	336	MTHK channels, potassium channel related protein;	96.59
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.57
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.57
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.57
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.55
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.54
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.54
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.53
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.53
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.52
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.52
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.52
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.52
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.52
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.52
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.51
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.5
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.47
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.47
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.46
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.45
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.44
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.41
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.4
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.39
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.39
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.39
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.38
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.36
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.35
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.35
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.34
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.34
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.34
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.34
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.33
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.32
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.32
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.31
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.31
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.28
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.27
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.27
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.26
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.25
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.25
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.25
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.25
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.23
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.23
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	96.22
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.22
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.22
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.21
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.21
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.2
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.18
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.18
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.18
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.17
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.15
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.15
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.15
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.14
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.13
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.13
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.13
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.13
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.12
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.12
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.1
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.09
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.08

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.9e-37  Score=269.58  Aligned_cols=161  Identities=27%  Similarity=0.357  Sum_probs=143.1

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .|++|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.++++|++|+++++++   
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g---~~~~~~~~Dv~~~~~v~~~---   76 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG---YDAHGVAFDVTDELAIEAA---   76 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTTCHHHHHHH---
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHH---
Confidence            4679999999999999999999999999999999999999988888888776654   5677777777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|+||||||+.
T Consensus        77 -----------------------------------------------------------~~~~~~~~G~iDiLVNNAG~~   97 (255)
T 4g81_D           77 -----------------------------------------------------------FSKLDAEGIHVDILINNAGIQ   97 (255)
T ss_dssp             -----------------------------------------------------------HHHHHHTTCCCCEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHCCCCcEEEECCCCC
Confidence                                                                       777777777788888888888


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.++++++|++++++|+.|+|+++|+++|+|++++.+|+|||+||.++..+.|+.++|++||
T Consensus        98 ~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asK  163 (255)
T 4g81_D           98 YRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAK  163 (255)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHH
Confidence            888999999999999999999999999999999998776579999999999999999999999987

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=4.3e-37  Score=267.23  Aligned_cols=158  Identities=27%  Similarity=0.358  Sum_probs=139.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.++++|++|+++++++     
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g---~~~~~~~~Dvt~~~~v~~~-----   74 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG---KEVLGVKADVSKKKDVEEF-----   74 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHH-----
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHH-----
Confidence            47899999999999999999999999999999999999999998888887654   5778888888888888877     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-  200 (265)
                                                                               ++++.+++|++|+||||||+.. 
T Consensus        75 ---------------------------------------------------------~~~~~~~~G~iDiLVNNAGi~~~   97 (254)
T 4fn4_A           75 ---------------------------------------------------------VRRTFETYSRIDVLCNNAGIMDG   97 (254)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCT
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCcccCC
Confidence                                                                     6666666666666666666553 


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..+++++++++|++++++|+.|+|+++|+++|+|++++ .|+|||+||+++..+.|+.++|++||
T Consensus        98 ~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~~~~~Y~asK  161 (254)
T 4fn4_A           98 VTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGFAGAPYTVAK  161 (254)
T ss_dssp             TCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCCCChHHHHHH
Confidence            46789999999999999999999999999999999887 79999999999999999999999997

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=8.9e-35  Score=255.07  Aligned_cols=152  Identities=28%  Similarity=0.357  Sum_probs=132.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +   .+...+++|++|+++++++      
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g---~~~~~~~~Dv~~~~~v~~~------   93 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G---GGAVGIQADSANLAELDRL------   93 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C---TTCEEEECCTTCHHHHHHH------
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C---CCeEEEEecCCCHHHHHHH------
Confidence            489999999999999999999999999999999999987777665543   2   4566677777777777766      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|+||||||.....
T Consensus        94 --------------------------------------------------------~~~~~~~~G~iDiLVNNAG~~~~~  117 (273)
T 4fgs_A           94 --------------------------------------------------------YEKVKAEAGRIDVLFVNAGGGSML  117 (273)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCEEEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    777777777777777777777778


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.++++++|++++++|+.|+|+++|+++|+|++   +|+||++||.++..+.|+.++|++||
T Consensus       118 ~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~~~~~~~~~Y~asK  177 (273)
T 4fgs_A          118 PLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGSTGTPAFSVYAASK  177 (273)
T ss_dssp             CTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             ChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhccCCCCchHHHHHH
Confidence            9999999999999999999999999999999964   48999999999999999999999997

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.2e-34  Score=250.29  Aligned_cols=154  Identities=24%  Similarity=0.350  Sum_probs=133.6

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+++|+||+++||||++|||+++|++|+++|++|++++|+.+  +++.+++.+.+   .++..+++|++|+++++++   
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g---~~~~~~~~Dv~d~~~v~~~---   74 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG---GNASALLIDFADPLAAKDS---   74 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT---CCEEEEECCTTSTTTTTTS---
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC---CcEEEEEccCCCHHHHHHH---
Confidence            357899999999999999999999999999999999999864  44555555543   5778888888887665444   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 +     .+|++|+||||||+.
T Consensus        75 -----------------------------------------------------------~-----~~g~iDiLVNNAGi~   90 (247)
T 4hp8_A           75 -----------------------------------------------------------F-----TDAGFDILVNNAGII   90 (247)
T ss_dssp             -----------------------------------------------------------S-----TTTCCCEEEECCCCC
T ss_pred             -----------------------------------------------------------H-----HhCCCCEEEECCCCC
Confidence                                                                       2     247888888888888


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.++++++|++++++|+.|+|+++|+++|+|++++..|+|||+||+++..+.|+.++|++||
T Consensus        91 ~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asK  156 (247)
T 4hp8_A           91 RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAK  156 (247)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHH
Confidence            888999999999999999999999999999999998876579999999999999999999999998

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=6.2e-34  Score=246.37  Aligned_cols=149  Identities=18%  Similarity=0.319  Sum_probs=127.5

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|++|||||++|||+++|++|+++|++|++++|+++.++++.++       ..++.++++|++|+++++++         
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~---------   65 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-------RPNLFYFHGDVADPLTLKKF---------   65 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT-------CTTEEEEECCTTSHHHHHHH---------
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-------cCCEEEEEecCCCHHHHHHH---------
Confidence            59999999999999999999999999999999986655443321       24566677777777777666         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.+++|++|+||||||+...+++.
T Consensus        66 -----------------------------------------------------v~~~~~~~g~iDiLVNNAG~~~~~~~~   92 (247)
T 3ged_A           66 -----------------------------------------------------VEYAMEKLQRIDVLVNNACRGSKGILS   92 (247)
T ss_dssp             -----------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCCGGG
T ss_pred             -----------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence                                                                 777777777777777777777778899


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++.++|++++++|+.|+|+++|+++|+|+++  +|+|||+||.++..+.|+.++|++||
T Consensus        93 ~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~~~~~~~~~Y~asK  150 (247)
T 3ged_A           93 SLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAFQSEPDSEAYASAK  150 (247)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeecccccCCCCCHHHHHHH
Confidence            99999999999999999999999999999875  49999999999999999999999997

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.4e-33  Score=245.91  Aligned_cols=155  Identities=25%  Similarity=0.300  Sum_probs=126.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++|+||+++||||++|||+++|++|+++|++|++++|+++..+.+. ++.+.+   .++.++++|++|+++++++     
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~-~~~~~~---~~~~~~~~Dv~~~~~v~~~-----   73 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLD-ALAQRQ---PRATYLPVELQDDAQCRDA-----   73 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHH-HHHHHC---TTCEEEECCTTCHHHHHHH-----
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHH-HHHhcC---CCEEEEEeecCCHHHHHHH-----
Confidence            3789999999999999999999999999999999999988765443 333333   4677777777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||+...
T Consensus        74 ---------------------------------------------------------v~~~~~~~G~iDiLVNnAGi~~~   96 (258)
T 4gkb_A           74 ---------------------------------------------------------VAQTIATFGRLDGLVNNAGVNDG   96 (258)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHhCCCCEEEECCCCCCC
Confidence                                                                     55555555556666666665433


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+ .+.+.++|++++++|+.++|+++|+++|+|+++  +|+|||+||+++..+.|+.++|++||
T Consensus        97 ~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~~~~Y~asK  157 (258)
T 4gkb_A           97 IG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTAVTGQGNTSGYCASK  157 (258)
T ss_dssp             CC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred             CC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhhccCCCCchHHHHHH
Confidence            33 467889999999999999999999999999765  49999999999999999999999998

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=6.7e-33  Score=241.99  Aligned_cols=151  Identities=21%  Similarity=0.272  Sum_probs=124.5

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +.+++|+||+++||||++|||+++|++|+++|++|++++|++++.             ..+..++++|++++++++++  
T Consensus         4 ~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------------~~~~~~~~~Dv~~~~~v~~~--   68 (261)
T 4h15_A            4 IEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-------------LPEELFVEADLTTKEGCAIV--   68 (261)
T ss_dssp             CCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------SCTTTEEECCTTSHHHHHHH--
T ss_pred             hhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-------------CCcEEEEEcCCCCHHHHHHH--
Confidence            566789999999999999999999999999999999999975421             12233566666666666666  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|+||||||+
T Consensus        69 ------------------------------------------------------------~~~~~~~~G~iDilVnnAG~   88 (261)
T 4h15_A           69 ------------------------------------------------------------AEATRQRLGGVDVIVHMLGG   88 (261)
T ss_dssp             ------------------------------------------------------------HHHHHHHTSSCSEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCC
Confidence                                                                        66666666666666666665


Q ss_pred             cc--cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC-CCCccccCC
Q psy9256         199 SQ--RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP-YSGSYTDHL  265 (265)
Q Consensus       199 ~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~-~~~~Y~asK  265 (265)
                      ..  .+++.++++++|++++++|+.|+++++|+++|+|++++ .|+|||+||.++..+.| +.+.|++||
T Consensus        89 ~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~~~~~Y~asK  157 (261)
T 4h15_A           89 SSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPESTTAYAAAK  157 (261)
T ss_dssp             CCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTTCHHHHHHH
T ss_pred             CccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCCccHHHHHHH
Confidence            43  35789999999999999999999999999999999886 79999999999999877 578899987

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.98  E-value=1e-32  Score=237.72  Aligned_cols=143  Identities=28%  Similarity=0.448  Sum_probs=120.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ++||+++||||++|||+++|++|+++|++|++++|+++.+++.         ...++..+++|++|+++++++       
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~---------~~~~~~~~~~Dv~~~~~v~~~-------   72 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP---------RHPRIRREELDITDSQRLQRL-------   72 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC---------CCTTEEEEECCTTCHHHHHHH-------
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh---------hcCCeEEEEecCCCHHHHHHH-------
Confidence            5899999999999999999999999999999999998766432         234677777777777765555       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             +    +++|++|+||||||+.  .+
T Consensus        73 -------------------------------------------------------~----~~~g~iDiLVNNAGi~--~~   91 (242)
T 4b79_A           73 -------------------------------------------------------F----EALPRLDVLVNNAGIS--RD   91 (242)
T ss_dssp             -------------------------------------------------------H----HHCSCCSEEEECCCCC--CG
T ss_pred             -------------------------------------------------------H----HhcCCCCEEEECCCCC--CC
Confidence                                                                   3    2456666777777654  35


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++++.++|++++++|+.|+|+++|+++|+|+++  +|+|||+||+++..+.|+.++|++||
T Consensus        92 ~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~~~~Y~asK  151 (242)
T 4b79_A           92 REEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYSTFGSADRPAYSASK  151 (242)
T ss_dssp             GGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeeccccCCCCCCHHHHHHH
Confidence            6788999999999999999999999999999765  59999999999999999999999998

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.97  E-value=1.7e-31  Score=232.61  Aligned_cols=161  Identities=23%  Similarity=0.353  Sum_probs=138.6

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +|.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+  ..++.++++|++|+++++++   
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~v~~~---   78 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG--SGKVIGVQTDVSDRAQCDAL---   78 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS--SSCEEEEECCTTSHHHHHHH---
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC--CCcEEEEEcCCCCHHHHHHH---
Confidence            5678999999999999999999999999999999999999888887777665433  24677777788777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|++|||||..
T Consensus        79 -----------------------------------------------------------~~~~~~~~g~id~lvnnAg~~   99 (262)
T 3pk0_A           79 -----------------------------------------------------------AGRAVEEFGGIDVVCANAGVF   99 (262)
T ss_dssp             -----------------------------------------------------------HHHHHHHHSCCSEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHhCCCCEEEECCCCC
Confidence                                                                       666666677777777777777


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-cCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-VGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-~~~~~~~~Y~asK  265 (265)
                      ...++.+.++++|++++++|+.|+++++++++|+|++++ .|+||++||.++. .+.|+++.|++||
T Consensus       100 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asK  165 (262)
T 3pk0_A          100 PDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITGYPGWSHYGATK  165 (262)
T ss_dssp             CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBCCTTCHHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCCChhhHHHH
Confidence            677888999999999999999999999999999998876 7999999999996 7889999999987

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.97  E-value=2e-31  Score=232.39  Aligned_cols=162  Identities=24%  Similarity=0.291  Sum_probs=138.7

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ++++++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.... ...++.++.+|++|+++++++   
T Consensus         2 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~---   77 (265)
T 3lf2_A            2 KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF-PGARLFASVCDVLDALQVRAF---   77 (265)
T ss_dssp             -CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-TTCCEEEEECCTTCHHHHHHH---
T ss_pred             CccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCCHHHHHHH---
Confidence            4567899999999999999999999999999999999999888888777766532 123477777777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|++|||||..
T Consensus        78 -----------------------------------------------------------~~~~~~~~g~id~lvnnAg~~   98 (265)
T 3lf2_A           78 -----------------------------------------------------------AEACERTLGCASILVNNAGQG   98 (265)
T ss_dssp             -----------------------------------------------------------HHHHHHHHCSCSEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCCC
Confidence                                                                       666666677777777777777


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||.++..+.|+.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  163 (265)
T 3lf2_A           99 RVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPEPHMVATSAAR  163 (265)
T ss_dssp             CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCCTTBHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCCCCchhhHHHH
Confidence            777888999999999999999999999999999998775 79999999999999999999999987

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.97  E-value=3.1e-31  Score=229.80  Aligned_cols=156  Identities=19%  Similarity=0.229  Sum_probs=138.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++++|++|+++++++      
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~------   74 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG---GRIVARSLDARNEDEVTAF------   74 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CEEEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECcCCCHHHHHHH------
Confidence            5789999999999999999999999999999999999999998888876653   5778888888888888777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.++ |++|++|||||.....
T Consensus        75 --------------------------------------------------------~~~~~~~-g~id~lv~nAg~~~~~   97 (252)
T 3h7a_A           75 --------------------------------------------------------LNAADAH-APLEVTIFNVGANVNF   97 (252)
T ss_dssp             --------------------------------------------------------HHHHHHH-SCEEEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHhh-CCceEEEECCCcCCCC
Confidence                                                                    6666666 7777777777777777


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        98 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  159 (252)
T 3h7a_A           98 PILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGSGFAAFASAK  159 (252)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCCCCccHHHHH
Confidence            888999999999999999999999999999998876 79999999999999999999999987

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.97  E-value=2.3e-31  Score=232.47  Aligned_cols=156  Identities=28%  Similarity=0.409  Sum_probs=136.9

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++.+|++|+++++++       
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~-------   71 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG---GTALAQVLDVTDRHSVAAF-------   71 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHH-------
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHH-------
Confidence            568999999999999999999999999999999999888888877776553   5677778888888777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.+++|++|+||||||+....+
T Consensus        72 -------------------------------------------------------~~~~~~~~g~iD~lVnnAG~~~~~~   96 (264)
T 3tfo_A           72 -------------------------------------------------------AQAAVDTWGRIDVLVNNAGVMPLSP   96 (264)
T ss_dssp             -------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             -------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCC
Confidence                                                                   6666666677777777777776778


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asK  157 (264)
T 3tfo_A           97 LAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVPTAAVYCATK  157 (264)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCCCChhHHHHH
Confidence            88999999999999999999999999999998876 79999999999999999999999987

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.97  E-value=2.5e-31  Score=230.80  Aligned_cols=158  Identities=31%  Similarity=0.422  Sum_probs=136.3

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++++|++|+++++++    
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~----   79 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG---GKAIGLECNVTDEQHREAV----   79 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH----
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHH----
Confidence            457899999999999999999999999999999999999888888777776543   5677788888888887777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||...
T Consensus        80 ----------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~  101 (256)
T 3gaf_A           80 ----------------------------------------------------------IKAALDQFGKITVLVNNAGGGG  101 (256)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSCCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666666666666677767666


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++ +.++++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++.+.|++||
T Consensus       102 ~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  164 (256)
T 3gaf_A          102 PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNVRMASYGSSK  164 (256)
T ss_dssp             CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCCCchHHHHHH
Confidence            6666 788999999999999999999999999998876 79999999999999999999999987

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.97  E-value=2.6e-31  Score=231.99  Aligned_cols=163  Identities=25%  Similarity=0.342  Sum_probs=140.0

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ..|.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+..  +.++.++++|++|+++++++  
T Consensus        13 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~v~~~--   88 (266)
T 4egf_A           13 AGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF--GTDVHTVAIDLAEPDAPAEL--   88 (266)
T ss_dssp             CGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTSTTHHHHH--
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHH--
Confidence            45678999999999999999999999999999999999999888888777765522  24677777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|+||||||.
T Consensus        89 ------------------------------------------------------------~~~~~~~~g~id~lv~nAg~  108 (266)
T 4egf_A           89 ------------------------------------------------------------ARRAAEAFGGLDVLVNNAGI  108 (266)
T ss_dssp             ------------------------------------------------------------HHHHHHHHTSCSEEEEECCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCc
Confidence                                                                        66666677777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.++++|++.+++|+.++++++++++|.|++++.+|+||++||.++..+.++.+.|++||
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  175 (266)
T 4egf_A          109 SHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSK  175 (266)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHH
Confidence            7777888999999999999999999999999999998876568999999999999999999999987

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.97  E-value=2.9e-31  Score=230.74  Aligned_cols=162  Identities=18%  Similarity=0.205  Sum_probs=133.1

Q ss_pred             ccccCCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        41 ~~~l~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      |++|+||+++||||++  |||+++|++|+++|++|++++|+++.++++.+++.+.+  +.++.++++|++|+++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~   78 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAHLYQIDVQSDEEVINGFE   78 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT--CSSCEEEECCTTCHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCcEEEEEccCCCHHHHHHHHH
Confidence            6789999999999865  99999999999999999999999999988888777654  3567788888888888888866


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                      .+.+++|++|+||||||+....                                                          
T Consensus        79 ~~~~~~G~iD~lvnnAg~~~~~----------------------------------------------------------  100 (256)
T 4fs3_A           79 QIGKDVGNIDGVYHSIAFANME----------------------------------------------------------  100 (256)
T ss_dssp             HHHHHHCCCSEEEECCCCCCGG----------------------------------------------------------
T ss_pred             HHHHHhCCCCEEEecccccccc----------------------------------------------------------
Confidence            6655555555555555532111                                                          


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|...+++|+.+++++++.+.|+|.+   +|+|||+||+++..+.|+++.|++||
T Consensus       101 ~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~IVnisS~~~~~~~~~~~~Y~asK  164 (256)
T 4fs3_A          101 DLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEFAVQNYNVMGVAK  164 (256)
T ss_dssp             GGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT---CEEEEEEECGGGTSCCTTTHHHHHHH
T ss_pred             ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCEEEEEeccccccCcccchhhHHHH
Confidence            01234677888999999999999999999999998743   59999999999999999999999997

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.97  E-value=3.7e-31  Score=232.35  Aligned_cols=161  Identities=22%  Similarity=0.309  Sum_probs=130.7

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC------------cHHHHHHHHHHhCCCCCcEEEEeec
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS------------NLERVKNLCVQAGAHPQSIYTLTLD  106 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~------------~~~~~~~~~~~~~~~~~~~~~~~~D  106 (265)
                      .+|.+++||+++||||++|||+++|++|+++|++|++++|++.            .+++..+.+...   +.++.++++|
T Consensus         3 ~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D   79 (281)
T 3s55_A            3 GSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT---GRRCISAKVD   79 (281)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT---TCCEEEEECC
T ss_pred             CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc---CCeEEEEeCC
Confidence            3567899999999999999999999999999999999999743            222333333222   2456666666


Q ss_pred             CCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc
Q psy9256         107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF  186 (265)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~  186 (265)
                      ++|+++++++                                                              ++++.+++
T Consensus        80 v~~~~~v~~~--------------------------------------------------------------~~~~~~~~   97 (281)
T 3s55_A           80 VKDRAALESF--------------------------------------------------------------VAEAEDTL   97 (281)
T ss_dssp             TTCHHHHHHH--------------------------------------------------------------HHHHHHHH
T ss_pred             CCCHHHHHHH--------------------------------------------------------------HHHHHHhc
Confidence            6666666666                                                              77777777


Q ss_pred             ccccEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         187 GCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       187 g~ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++.+.|++||
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  175 (281)
T 3s55_A           98 GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSANFAQASYVSSK  175 (281)
T ss_dssp             TCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcCCCCCCchhHHHH
Confidence            7777788888877777888999999999999999999999999999998876 79999999999999999999999987

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.97  E-value=3.2e-31  Score=232.73  Aligned_cols=162  Identities=25%  Similarity=0.362  Sum_probs=130.5

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-------------CCcHHHHHHHHHHhCCCCCcEEEEee
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-------------SSNLERVKNLCVQAGAHPQSIYTLTL  105 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (265)
                      ..|.+++||+++||||++|||+++|++|+++|++|++++|+             ++.++++.+++..   .+.++.++.+
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   84 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED---QGRKALTRVL   84 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT---TTCCEEEEEC
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh---cCCeEEEEEc
Confidence            45678999999999999999999999999999999999984             3333333333322   2345556666


Q ss_pred             cCCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhh
Q psy9256         106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQ  185 (265)
Q Consensus       106 D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~  185 (265)
                      |++|+++++++                                                              ++++.++
T Consensus        85 Dv~~~~~v~~~--------------------------------------------------------------~~~~~~~  102 (280)
T 3pgx_A           85 DVRDDAALREL--------------------------------------------------------------VADGMEQ  102 (280)
T ss_dssp             CTTCHHHHHHH--------------------------------------------------------------HHHHHHH
T ss_pred             CCCCHHHHHHH--------------------------------------------------------------HHHHHHH
Confidence            66666666655                                                              7777777


Q ss_pred             cccccEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         186 FGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       186 ~g~ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +|++|+||||||.....++.+.+.++|++++++|+.|+++++++++|+|++++.+|+||++||.++..+.++.+.|++||
T Consensus       103 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  182 (280)
T 3pgx_A          103 FGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASK  182 (280)
T ss_dssp             HCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCCchhHHHHH
Confidence            77777777777777777888999999999999999999999999999998875469999999999999999999999987

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.97  E-value=2.4e-31  Score=229.90  Aligned_cols=156  Identities=27%  Similarity=0.408  Sum_probs=133.7

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.      .+...+++|++|+++++++    
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~----   73 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG------DNGKGMALNVTNPESIEAV----   73 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG------GGEEEEECCTTCHHHHHHH----
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------ccceEEEEeCCCHHHHHHH----
Confidence            467899999999999999999999999999999999998877766655442      2455677777777777766    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||+..
T Consensus        74 ----------------------------------------------------------~~~~~~~~g~iD~lv~nAg~~~   95 (248)
T 3op4_A           74 ----------------------------------------------------------LKAITDEFGGVDILVNNAGITR   95 (248)
T ss_dssp             ----------------------------------------------------------HHHHHHHHCCCSEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666667777777777777777


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++++.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  159 (248)
T 3op4_A           96 DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNAGQANYAAAK  159 (248)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHHHH
Confidence            77888999999999999999999999999999998876 79999999999999999999999987

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.97  E-value=3.4e-31  Score=229.95  Aligned_cols=159  Identities=26%  Similarity=0.377  Sum_probs=136.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++..   .+.++.++++|++|+++++++     
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~-----   73 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ---FPGQILTVQMDVRNTDDIQKM-----   73 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---STTCEEEEECCTTCHHHHHHH-----
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHH-----
Confidence            467899999999999999999999999999999999998877776665532   345677778888887777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||....
T Consensus        74 ---------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~   96 (257)
T 3imf_A           74 ---------------------------------------------------------IEQIDEKFGRIDILINNAAGNFI   96 (257)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     66666666777777777777767


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++++++|+.|+++++++++|+|.+++..|+||++||.++..+.|+.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (257)
T 3imf_A           97 CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK  160 (257)
T ss_dssp             CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHH
Confidence            7888999999999999999999999999999996665579999999999999999999999987

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.97  E-value=3.9e-31  Score=232.84  Aligned_cols=169  Identities=22%  Similarity=0.325  Sum_probs=130.5

Q ss_pred             HHHHhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH
Q psy9256          33 FIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        33 ~~~~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (265)
                      +...+...+..++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+  +..+.++++|++|+++
T Consensus        20 ~~~~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~   97 (281)
T 4dry_A           20 FQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GNIVRAVVCDVGDPDQ   97 (281)
T ss_dssp             --------------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHH
T ss_pred             EeccccccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCeEEEEEcCCCCHHH
Confidence            33334455567899999999999999999999999999999999999888888777765543  1234677778888777


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEE
Q psy9256         113 HRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDIL  192 (265)
Q Consensus       113 ~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldil  192 (265)
                      ++++                                                              ++++.+++|++|+|
T Consensus        98 v~~~--------------------------------------------------------------~~~~~~~~g~iD~l  115 (281)
T 4dry_A           98 VAAL--------------------------------------------------------------FAAVRAEFARLDLL  115 (281)
T ss_dssp             HHHH--------------------------------------------------------------HHHHHHHHSCCSEE
T ss_pred             HHHH--------------------------------------------------------------HHHHHHHcCCCCEE
Confidence            7777                                                              56666666666666


Q ss_pred             Eeccccccc-ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc-CCceEEEEcccccccCCCCCCccccCC
Q psy9256         193 INNAGRSQR-AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE-QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       193 VnnAG~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~-~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |||||.... .++.+.+.++|++++++|+.|+++++++++|.|++++ .+|+||++||.++..+.++.+.|++||
T Consensus       116 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  190 (281)
T 4dry_A          116 VNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATK  190 (281)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHH
Confidence            666666533 6788899999999999999999999999999998764 258999999999999999999999987

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.97  E-value=3.4e-31  Score=232.09  Aligned_cols=159  Identities=23%  Similarity=0.304  Sum_probs=138.9

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++++|++|+++++++    
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~----   93 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG---HDAEAVAFDVTSESEIIEA----   93 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTTCHHHHHHH----
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHH----
Confidence            467899999999999999999999999999999999999888888777766543   4677777777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|+||||||+..
T Consensus        94 ----------------------------------------------------------~~~~~~~~g~iD~lv~nAg~~~  115 (271)
T 4ibo_A           94 ----------------------------------------------------------FARLDEQGIDVDILVNNAGIQF  115 (271)
T ss_dssp             ----------------------------------------------------------HHHHHHHTCCCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHCCCCCEEEECCCCCC
Confidence                                                                      6666777777777777777777


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       116 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asK  179 (271)
T 4ibo_A          116 RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELARATVAPYTVAK  179 (271)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCCCCchhHHHHH
Confidence            77888999999999999999999999999999998876 79999999999999999999999987

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.97  E-value=4.8e-31  Score=233.80  Aligned_cols=166  Identities=25%  Similarity=0.363  Sum_probs=139.5

Q ss_pred             HHhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHH
Q psy9256          35 EKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHR  114 (265)
Q Consensus        35 ~~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (265)
                      +...+.|++++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+  ..++.++++|++|+++++
T Consensus        30 ~~~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~d~~~v~  107 (293)
T 3rih_A           30 PAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG--AGNVIGVRLDVSDPGSCA  107 (293)
T ss_dssp             ----CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS--SSCEEEEECCTTCHHHHH
T ss_pred             CcccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC--CCcEEEEEEeCCCHHHHH
Confidence            344456788999999999999999999999999999999999999988888777664432  246777778888877777


Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEe
Q psy9256         115 RCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILIN  194 (265)
Q Consensus       115 ~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVn  194 (265)
                      ++                                                              ++++.+++|++|+|||
T Consensus       108 ~~--------------------------------------------------------------~~~~~~~~g~iD~lvn  125 (293)
T 3rih_A          108 DA--------------------------------------------------------------ARTVVDAFGALDVVCA  125 (293)
T ss_dssp             HH--------------------------------------------------------------HHHHHHHHSCCCEEEE
T ss_pred             HH--------------------------------------------------------------HHHHHHHcCCCCEEEE
Confidence            77                                                              6666666677777777


Q ss_pred             cccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-cCCCCCCccccCC
Q psy9256         195 NAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-VGAPYSGSYTDHL  265 (265)
Q Consensus       195 nAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-~~~~~~~~Y~asK  265 (265)
                      |||.....++.+.++++|++.+++|+.|+++++++++|.|++++ .|+||++||.++. .+.++.+.|++||
T Consensus       126 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~~~~~~Y~asK  196 (293)
T 3rih_A          126 NAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGYPGWSHYGASK  196 (293)
T ss_dssp             CCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBCTTCHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCCCCCHHHHHHH
Confidence            77777677888999999999999999999999999999998876 7999999999996 7889999999987

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.97  E-value=3.2e-31  Score=228.97  Aligned_cols=156  Identities=23%  Similarity=0.391  Sum_probs=133.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++      +.++.++++|++|+++++++     
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~-----   70 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI------GKKARAIAADISDPGSVKAL-----   70 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH------CTTEEECCCCTTCHHHHHHH-----
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEcCCCCHHHHHHH-----
Confidence            4688999999999999999999999999999999999887766655543      24667777777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||....
T Consensus        71 ---------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~   93 (247)
T 3rwb_A           71 ---------------------------------------------------------FAEIQALTGGIDILVNNASIVPF   93 (247)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCSEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHCCCCCEEEECCCCCCC
Confidence                                                                     66666666777777777777767


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++++++|+.|+++++++++|+|++++..|+||++||.++..+.|+++.|++||
T Consensus        94 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (247)
T 3rwb_A           94 VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK  157 (247)
T ss_dssp             CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence            7888999999999999999999999999999998875469999999999999999999999987

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.97  E-value=6.2e-31  Score=231.17  Aligned_cols=159  Identities=25%  Similarity=0.303  Sum_probs=132.7

Q ss_pred             hhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          38 NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        38 ~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      .|.+.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++      +.++.++++|++|+++++++ 
T Consensus        21 sm~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~-   93 (277)
T 3gvc_A           21 SMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI------GCGAAACRVDVSDEQQIIAM-   93 (277)
T ss_dssp             ------CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------CSSCEEEECCTTCHHHHHHH-
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCcceEEEecCCCHHHHHHH-
Confidence            45556799999999999999999999999999999999999887776655543      24566777777777777777 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.+++|++|++|||||
T Consensus        94 -------------------------------------------------------------~~~~~~~~g~iD~lvnnAg  112 (277)
T 3gvc_A           94 -------------------------------------------------------------VDACVAAFGGVDKLVANAG  112 (277)
T ss_dssp             -------------------------------------------------------------HHHHHHHHSSCCEEEECCC
T ss_pred             -------------------------------------------------------------HHHHHHHcCCCCEEEECCC
Confidence                                                                         6666666777777777777


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .....++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asK  179 (277)
T 3gvc_A          113 VVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAVGGTGAYGMSK  179 (277)
T ss_dssp             CCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCchhHHHHH
Confidence            77777888999999999999999999999999999998876 79999999999999999999999987

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.97  E-value=4.9e-31  Score=232.42  Aligned_cols=161  Identities=29%  Similarity=0.378  Sum_probs=131.6

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ..|.++++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++..   .+.++.++++|++|+++++++  
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~--   95 (283)
T 3v8b_A           21 QSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG---AGGQAIALEADVSDELQMRNA--   95 (283)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT---TTCCEEEEECCTTCHHHHHHH--
T ss_pred             hhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHH--
Confidence            456778999999999999999999999999999999999998877776665543   235677788888888877777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|++|||||+
T Consensus        96 ------------------------------------------------------------~~~~~~~~g~iD~lVnnAg~  115 (283)
T 3v8b_A           96 ------------------------------------------------------------VRDLVLKFGHLDIVVANAGI  115 (283)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHhCCCCEEEECCCC
Confidence                                                                        56666666666666666666


Q ss_pred             cc-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc--CCCCCCccccCC
Q psy9256         199 SQ-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV--GAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~--~~~~~~~Y~asK  265 (265)
                      .. ..++.+.++++|++++++|+.|+++++++++|.|++++ .|+||++||.++..  +.|+.+.|++||
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~~~Y~asK  184 (283)
T 3v8b_A          116 NGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGATAYTATK  184 (283)
T ss_dssp             CCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCSTTCHHHHHHH
T ss_pred             CCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCCCCCchHHHHHH
Confidence            53 36788999999999999999999999999999998876 79999999999987  778899999987

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.97  E-value=7.9e-31  Score=229.91  Aligned_cols=159  Identities=26%  Similarity=0.432  Sum_probs=129.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-------------CCcHHHHHHHHHHhCCCCCcEEEEeecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-------------SSNLERVKNLCVQAGAHPQSIYTLTLDVT  108 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~  108 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+             .+.++++.+++...   +.++.++.+|++
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~   83 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA---NRRIVAAVVDTR   83 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT---TCCEEEEECCTT
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc---CCeEEEEECCCC
Confidence            46899999999999999999999999999999999984             22333333333222   245555566666


Q ss_pred             ChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccc
Q psy9256         109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGC  188 (265)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~  188 (265)
                      |+++++++                                                              ++++.+++|+
T Consensus        84 ~~~~v~~~--------------------------------------------------------------~~~~~~~~g~  101 (277)
T 3tsc_A           84 DFDRLRKV--------------------------------------------------------------VDDGVAALGR  101 (277)
T ss_dssp             CHHHHHHH--------------------------------------------------------------HHHHHHHHSC
T ss_pred             CHHHHHHH--------------------------------------------------------------HHHHHHHcCC
Confidence            66555555                                                              7777777777


Q ss_pred             ccEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         189 LDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       189 ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|.+++..|+||++||.++..+.|+.+.|++||
T Consensus       102 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  178 (277)
T 3tsc_A          102 LDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASK  178 (277)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCCchhhHHHH
Confidence            78888888877777888999999999999999999999999999998875468999999999999999999999987

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.97  E-value=5.4e-31  Score=230.49  Aligned_cols=161  Identities=29%  Similarity=0.452  Sum_probs=134.4

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec-CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR-SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      |...+++||+++||||++|||+++|++|+++|++|++++| +.+.++++.+++...+   .++.++.+|++|+++++++ 
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~-   96 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG---GEAFAVKADVSQESEVEAL-   96 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHH-
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHH-
Confidence            4456789999999999999999999999999999999988 4555566666555443   4677777777777777777 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.+++|++|+||||||
T Consensus        97 -------------------------------------------------------------~~~~~~~~g~id~lv~nAg  115 (269)
T 4dmm_A           97 -------------------------------------------------------------FAAVIERWGRLDVLVNNAG  115 (269)
T ss_dssp             -------------------------------------------------------------HHHHHHHHSCCCEEEECCC
T ss_pred             -------------------------------------------------------------HHHHHHHcCCCCEEEECCC
Confidence                                                                         6666666677777777777


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .....++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  182 (269)
T 4dmm_A          116 ITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNPGQANYSAAK  182 (269)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCchhHHHHH
Confidence            77677788899999999999999999999999999998876 79999999999999999999999987

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.97  E-value=1.2e-30  Score=227.10  Aligned_cols=168  Identities=27%  Similarity=0.346  Sum_probs=137.1

Q ss_pred             HHHHHhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChH
Q psy9256          32 FFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTK  111 (265)
Q Consensus        32 ~~~~~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~  111 (265)
                      ....+..++|..++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++.+|++|++
T Consensus        15 ~~~~~~~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~   91 (262)
T 3rkr_A           15 GHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG---GEAESHACDLSHSD   91 (262)
T ss_dssp             ----------CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTCHH
T ss_pred             CCCCCCcchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC---CceeEEEecCCCHH
Confidence            344455577888999999999999999999999999999999999999888888777776543   56778888888888


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccE
Q psy9256         112 YHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDI  191 (265)
Q Consensus       112 ~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldi  191 (265)
                      +++++                                                              ++++.+++|++|+
T Consensus        92 ~v~~~--------------------------------------------------------------~~~~~~~~g~id~  109 (262)
T 3rkr_A           92 AIAAF--------------------------------------------------------------ATGVLAAHGRCDV  109 (262)
T ss_dssp             HHHHH--------------------------------------------------------------HHHHHHHHSCCSE
T ss_pred             HHHHH--------------------------------------------------------------HHHHHHhcCCCCE
Confidence            88877                                                              5566666666666


Q ss_pred             EEecccc-cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         192 LINNAGR-SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       192 lVnnAG~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +|||||. ...+++.+.+.++|++.+++|+.|++++++.++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       110 lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  183 (262)
T 3rkr_A          110 LVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPVADGAAYTASK  183 (262)
T ss_dssp             EEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCCTTCHHHHHHH
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCCCCCchHHHHH
Confidence            6666666 3456788899999999999999999999999999998776 79999999999999999999999987

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.97  E-value=6.4e-31  Score=230.20  Aligned_cols=158  Identities=27%  Similarity=0.406  Sum_probs=137.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++.+|++|+++++++     
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~-----   95 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG---LEGRGAVLNVNDATAVDAL-----   95 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT---CCCEEEECCTTCHHHHHHH-----
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEEeCCCHHHHHHH-----
Confidence            35889999999999999999999999999999999999888888777766553   4566677777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||+...
T Consensus        96 ---------------------------------------------------------~~~~~~~~g~iD~lvnnAg~~~~  118 (270)
T 3ftp_A           96 ---------------------------------------------------------VESTLKEFGALNVLVNNAGITQD  118 (270)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     66666677777777777777777


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++++.|++||
T Consensus       119 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  181 (270)
T 3ftp_A          119 QLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNPGQVNYAAAK  181 (270)
T ss_dssp             BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCchhHHHHH
Confidence            7888999999999999999999999999999998876 79999999999999999999999987

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.97  E-value=1.1e-30  Score=231.72  Aligned_cols=159  Identities=26%  Similarity=0.400  Sum_probs=128.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC------------CcHHHHHHHHHHhCCCCCcEEEEeecCCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS------------SNLERVKNLCVQAGAHPQSIYTLTLDVTQ  109 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~------------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|++            +.++++.+++...   +.++.++++|++|
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~  100 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL---GRRIIASQVDVRD  100 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT---TCCEEEEECCTTC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc---CCceEEEECCCCC
Confidence            468999999999999999999999999999999999873            3333333333332   2456666666666


Q ss_pred             hHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccc
Q psy9256         110 TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  189 (265)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~l  189 (265)
                      +++++++                                                              ++++.+++|++
T Consensus       101 ~~~v~~~--------------------------------------------------------------~~~~~~~~g~i  118 (299)
T 3t7c_A          101 FDAMQAA--------------------------------------------------------------VDDGVTQLGRL  118 (299)
T ss_dssp             HHHHHHH--------------------------------------------------------------HHHHHHHHSCC
T ss_pred             HHHHHHH--------------------------------------------------------------HHHHHHHhCCC
Confidence            6666666                                                              66666666777


Q ss_pred             cEEEeccccccccc-ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         190 DILINNAGRSQRAA-WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       190 dilVnnAG~~~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |+||||||.....+ +.+.++++|++++++|+.|+++++++++|.|.+++..|+||++||.++..+.++.+.|++||
T Consensus       119 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  195 (299)
T 3t7c_A          119 DIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASK  195 (299)
T ss_dssp             CEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCcchHHHHH
Confidence            77777777665544 88899999999999999999999999999998765469999999999999999999999987

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=1e-30  Score=226.26  Aligned_cols=159  Identities=28%  Similarity=0.375  Sum_probs=128.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+......++.++++|++|+++++++      
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~------   77 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTE------   77 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHH------
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHH------
Confidence            57899999999999999999999999999999999999888888887776643335677778888888777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        78 --------------------------------------------------------~~~~~~~~g~iD~lvnnAg~~~~~  101 (250)
T 3nyw_A           78 --------------------------------------------------------IKDIHQKYGAVDILVNAAAMFMDG  101 (250)
T ss_dssp             --------------------------------------------------------HHHHHHHHCCEEEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHhcCCCCEEEECCCcCCCC
Confidence                                                                    666666666677777777766666


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++ +.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.+..+.|++||
T Consensus       102 ~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  162 (250)
T 3nyw_A          102 SL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFADGGIYGSTK  162 (250)
T ss_dssp             CC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-------CCTTHHHHHH
T ss_pred             CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCCCCCcchHHHH
Confidence            66 778899999999999999999999999998876 79999999999999777789999987

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.97  E-value=1.3e-30  Score=231.56  Aligned_cols=162  Identities=25%  Similarity=0.345  Sum_probs=140.7

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ..|.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++.+|++|+++++++  
T Consensus        24 ~~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~--   98 (301)
T 3tjr_A           24 GFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG---FDAHGVVCDVRHLDEMVRL--   98 (301)
T ss_dssp             CCCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH--
T ss_pred             hHHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHH--
Confidence            34567899999999999999999999999999999999999988888777766543   5677788888888777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|++|||||+
T Consensus        99 ------------------------------------------------------------~~~~~~~~g~id~lvnnAg~  118 (301)
T 3tjr_A           99 ------------------------------------------------------------ADEAFRLLGGVDVVFSNAGI  118 (301)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSSCSEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHhCCCCCEEEECCCc
Confidence                                                                        66666666777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...+++.+.+.++|++.+++|+.|++++++.++|.|.+++.+|+||++||.++..+.|+.+.|++||
T Consensus       119 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  185 (301)
T 3tjr_A          119 VVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAK  185 (301)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHH
Confidence            7777888999999999999999999999999999998876468999999999999999999999987

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.97  E-value=1.1e-30  Score=229.55  Aligned_cols=161  Identities=25%  Similarity=0.313  Sum_probs=137.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+....++.++++|++|+++++++     
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~-----   81 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA-----   81 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH-----
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH-----
Confidence            367899999999999999999999999999999999999888888877776554444777788888888877777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc-cc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR-SQ  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~-~~  200 (265)
                                                                               ++++.+++|++|++|||||. ..
T Consensus        82 ---------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~  104 (281)
T 3svt_A           82 ---------------------------------------------------------VDAVTAWHGRLHGVVHCAGGSEN  104 (281)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCC
Confidence                                                                     55566666666666666665 44


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.|+++++++++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       105 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  168 (281)
T 3svt_A          105 IGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAASNTHRWFGAYGVTK  168 (281)
T ss_dssp             CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTTCTHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHcCCCCCChhHHHHH
Confidence            56788899999999999999999999999999998776 79999999999999999999999987

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.97  E-value=1.6e-30  Score=232.67  Aligned_cols=162  Identities=26%  Similarity=0.410  Sum_probs=129.8

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC------------CcHHHHHHHHHHhCCCCCcEEEEeec
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS------------SNLERVKNLCVQAGAHPQSIYTLTLD  106 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~------------~~~~~~~~~~~~~~~~~~~~~~~~~D  106 (265)
                      .+|..++||+++||||++|||+++|++|+++|++|++++|+.            +.++++.+++.+.   +.++.++.+|
T Consensus        39 ~~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D  115 (317)
T 3oec_A           39 ARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ---GRRIIARQAD  115 (317)
T ss_dssp             ---CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT---TCCEEEEECC
T ss_pred             chhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc---CCeEEEEECC
Confidence            356789999999999999999999999999999999998862            2222232222222   2455555666


Q ss_pred             CCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc
Q psy9256         107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF  186 (265)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~  186 (265)
                      ++|+++++++                                                              ++++.+++
T Consensus       116 v~d~~~v~~~--------------------------------------------------------------~~~~~~~~  133 (317)
T 3oec_A          116 VRDLASLQAV--------------------------------------------------------------VDEALAEF  133 (317)
T ss_dssp             TTCHHHHHHH--------------------------------------------------------------HHHHHHHH
T ss_pred             CCCHHHHHHH--------------------------------------------------------------HHHHHHHc
Confidence            6665555555                                                              77777777


Q ss_pred             ccccEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         187 GCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       187 g~ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++.+|+||++||.++..+.|+.+.|++||
T Consensus       134 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  212 (317)
T 3oec_A          134 GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASK  212 (317)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCCCcchHHHH
Confidence            7788888888877777888999999999999999999999999999998875469999999999999999999999987

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.97  E-value=2.6e-30  Score=227.45  Aligned_cols=162  Identities=25%  Similarity=0.393  Sum_probs=127.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-------------HHHHHHHHHHhCCCCCcEEEEeecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-------------LERVKNLCVQAGAHPQSIYTLTLDVT  108 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~D~~  108 (265)
                      ..++||+++||||++|||+++|++|+++|++|++++|+.+.             .+++.+...+....+.++.++++|++
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            46899999999999999999999999999999999987321             22222222222222345556666666


Q ss_pred             ChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccc
Q psy9256         109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGC  188 (265)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~  188 (265)
                      |+++++++                                                              ++++.+++|+
T Consensus        87 ~~~~v~~~--------------------------------------------------------------~~~~~~~~g~  104 (286)
T 3uve_A           87 DYDALKAA--------------------------------------------------------------VDSGVEQLGR  104 (286)
T ss_dssp             CHHHHHHH--------------------------------------------------------------HHHHHHHHSC
T ss_pred             CHHHHHHH--------------------------------------------------------------HHHHHHHhCC
Confidence            66665555                                                              6666667777


Q ss_pred             ccEEEecccccccc-cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         189 LDILINNAGRSQRA-AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       189 ldilVnnAG~~~~~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +|+||||||+.... ++.+.+.++|++++++|+.|+++++++++|+|.+++.+|+||++||.++..+.|+.+.|++||
T Consensus       105 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  182 (286)
T 3uve_A          105 LDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAK  182 (286)
T ss_dssp             CCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCCCccHHHHHH
Confidence            77777777776554 488899999999999999999999999999998875469999999999999999999999987

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.97  E-value=1.8e-30  Score=225.45  Aligned_cols=157  Identities=27%  Similarity=0.378  Sum_probs=134.5

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |.+++||+++||||++|||+++|++|+++|++|++++|+.+.++++.+++   +   .+..++++|++|+++++++    
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~v~~~----   72 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---G---PAAYAVQMDVTRQDSIDAA----   72 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C---TTEEEEECCTTCHHHHHHH----
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C---CCceEEEeeCCCHHHHHHH----
Confidence            45688999999999999999999999999999999999877766655543   2   4566777777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||...
T Consensus        73 ----------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~~   94 (259)
T 4e6p_A           73 ----------------------------------------------------------IAATVEHAGGLDILVNNAALFD   94 (259)
T ss_dssp             ----------------------------------------------------------HHHHHHHSSSCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCcCC
Confidence                                                                      6777777777777777777777


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.|+++++++++|.|.+++.+|+||++||.++..+.++.+.|++||
T Consensus        95 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (259)
T 4e6p_A           95 LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATK  159 (259)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHH
Confidence            77888999999999999999999999999999998875469999999999999999999999987

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.97  E-value=7.3e-31  Score=231.06  Aligned_cols=160  Identities=29%  Similarity=0.380  Sum_probs=132.9

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .|.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++..   .+.++.++.+|++|+++++++   
T Consensus         2 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~---   75 (280)
T 3tox_A            2 VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG---GGGEAAALAGDVGDEALHEAL---   75 (280)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT---TTCCEEECCCCTTCHHHHHHH---
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHH---
Confidence            46778999999999999999999999999999999999998877776665533   245677777787777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|+||||||..
T Consensus        76 -----------------------------------------------------------~~~~~~~~g~iD~lvnnAg~~   96 (280)
T 3tox_A           76 -----------------------------------------------------------VELAVRRFGGLDTAFNNAGAL   96 (280)
T ss_dssp             -----------------------------------------------------------HHHHHHHHSCCCEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCCC
Confidence                                                                       555556666666666666655


Q ss_pred             -ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-cCCCCCCccccCC
Q psy9256         200 -QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-VGAPYSGSYTDHL  265 (265)
Q Consensus       200 -~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-~~~~~~~~Y~asK  265 (265)
                       ...++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++. .+.++.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asK  163 (280)
T 3tox_A           97 GAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGFAGVAPYAASK  163 (280)
T ss_dssp             CSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBCCTTCHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCCCCCchhHHHHH
Confidence             346788899999999999999999999999999998876 7999999999998 7889999999987

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.4e-30  Score=229.23  Aligned_cols=161  Identities=26%  Similarity=0.360  Sum_probs=133.7

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec-CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR-SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .+.++++|+++||||++|||+++|++|+++|++|++++| +.+.++++.+++....  +.++.++++|++|+++++++  
T Consensus        19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~--   94 (281)
T 3v2h_A           19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS--SGTVLHHPADMTKPSEIADM--   94 (281)
T ss_dssp             ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC--SSCEEEECCCTTCHHHHHHH--
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc--CCcEEEEeCCCCCHHHHHHH--
Confidence            356789999999999999999999999999999999999 4455555555544332  35667777777777777776  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|+||||||.
T Consensus        95 ------------------------------------------------------------~~~~~~~~g~iD~lv~nAg~  114 (281)
T 3v2h_A           95 ------------------------------------------------------------MAMVADRFGGADILVNNAGV  114 (281)
T ss_dssp             ------------------------------------------------------------HHHHHHHTSSCSEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHCCCCCEEEECCCC
Confidence                                                                        66666777777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       115 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  180 (281)
T 3v2h_A          115 QFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASPFKSAYVAAK  180 (281)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCCCchHHHHHH
Confidence            7777888999999999999999999999999999998876 79999999999999999999999987

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.97  E-value=7.5e-31  Score=230.30  Aligned_cols=162  Identities=22%  Similarity=0.307  Sum_probs=138.2

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .++..++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++....  +.++.++++|++|+++++++  
T Consensus        20 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~--   95 (277)
T 4fc7_A           20 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT--GRRCLPLSMDVRAPPAVMAA--   95 (277)
T ss_dssp             BCTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHH--
T ss_pred             CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHH--
Confidence            34456899999999999999999999999999999999999888777766664432  24677777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|+||||||.
T Consensus        96 ------------------------------------------------------------~~~~~~~~g~id~lv~nAg~  115 (277)
T 4fc7_A           96 ------------------------------------------------------------VDQALKEFGRIDILINCAAG  115 (277)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCcC
Confidence                                                                        66666777777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  181 (277)
T 4fc7_A          116 NFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQALQVHAGSAK  181 (277)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCTTCHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCcHHHHHHH
Confidence            7677888999999999999999999999999999998876 79999999999999999999999987

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.97  E-value=2.8e-30  Score=226.78  Aligned_cols=162  Identities=28%  Similarity=0.381  Sum_probs=137.5

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +.+++++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++++|++|+++++++  
T Consensus        25 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~d~~~v~~~--   99 (276)
T 3r1i_A           25 LDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG---GKALPIRCDVTQPDQVRGM--   99 (276)
T ss_dssp             GGGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CCCEEEECCTTCHHHHHHH--
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHH--
Confidence            45678999999999999999999999999999999999999998888888776543   4677778888888777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|++|||||.
T Consensus       100 ------------------------------------------------------------~~~~~~~~g~iD~lvnnAg~  119 (276)
T 3r1i_A          100 ------------------------------------------------------------LDQMTGELGGIDIAVCNAGI  119 (276)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCSEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCC
Confidence                                                                        66666666677777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC--CCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA--PYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~--~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++++++|+.|+++++++++|.|++++.+|+||++||.++..+.  ++.+.|++||
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asK  188 (276)
T 3r1i_A          120 VSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSK  188 (276)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHH
Confidence            666778889999999999999999999999999999987645999999999998764  3568899987

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.97  E-value=1.2e-30  Score=229.10  Aligned_cols=159  Identities=20%  Similarity=0.239  Sum_probs=138.2

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++.+|++|+++++++   
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~---  100 (275)
T 4imr_A           27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG---GTAQELAGDLSEAGAGTDL---  100 (275)
T ss_dssp             HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT---CCEEEEECCTTSTTHHHHH---
T ss_pred             ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHH---
Confidence            3457899999999999999999999999999999999999999888887776543   5677788888888777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+. +++|+||||||..
T Consensus       101 -----------------------------------------------------------~~~~~~~-g~iD~lvnnAg~~  120 (275)
T 4imr_A          101 -----------------------------------------------------------IERAEAI-APVDILVINASAQ  120 (275)
T ss_dssp             -----------------------------------------------------------HHHHHHH-SCCCEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHh-CCCCEEEECCCCC
Confidence                                                                       5555555 7777777777777


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.++++|++.+++|+.|+++++++++|.|++++ .|+||++||.++..+.+..+.|++||
T Consensus       121 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asK  185 (275)
T 4imr_A          121 INATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPKSVVTAYAATK  185 (275)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCchhhHHHH
Confidence            777888999999999999999999999999999998876 79999999999999888888899987

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.97  E-value=2e-30  Score=224.44  Aligned_cols=159  Identities=23%  Similarity=0.375  Sum_probs=135.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecC--CChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV--TQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~~~~  119 (265)
                      ..++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+  +.+..++.+|+  +|+++++++   
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   82 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET--GRQPQWFILDLLTCTSENCQQL---   82 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SCCCEEEECCTTTCCHHHHHHH---
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCCceEEEEecccCCHHHHHHH---
Confidence            45889999999999999999999999999999999999888888777766543  23566677777  777777766   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|++|||||..
T Consensus        83 -----------------------------------------------------------~~~~~~~~g~id~lv~nAg~~  103 (252)
T 3f1l_A           83 -----------------------------------------------------------AQRIAVNYPRLDGVLHNAGLL  103 (252)
T ss_dssp             -----------------------------------------------------------HHHHHHHCSCCSEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHhCCCCCEEEECCccC
Confidence                                                                       666666667777777777764


Q ss_pred             -ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 -QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 -~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                       ...++.+.++++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++.+.|++||
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  169 (252)
T 3f1l_A          104 GDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYAASK  169 (252)
T ss_dssp             CCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCCCCchhHHHH
Confidence             346788899999999999999999999999999998776 79999999999999999999999987

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.97  E-value=1.7e-30  Score=227.85  Aligned_cols=159  Identities=28%  Similarity=0.443  Sum_probs=128.3

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .+|..+.+|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++   +   .++.++++|++|+++++++  
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~d~~~v~~~--   92 (272)
T 4dyv_A           21 QSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---G---DDALCVPTDVTDPDSVRAL--   92 (272)
T ss_dssp             -------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---T---SCCEEEECCTTSHHHHHHH--
T ss_pred             hhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---C---CCeEEEEecCCCHHHHHHH--
Confidence            4567889999999999999999999999999999999999887776665544   2   4567777787777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|+||||||.
T Consensus        93 ------------------------------------------------------------~~~~~~~~g~iD~lVnnAg~  112 (272)
T 4dyv_A           93 ------------------------------------------------------------FTATVEKFGRVDVLFNNAGT  112 (272)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCC
Confidence                                                                        66666666666666666666


Q ss_pred             ccc-ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-CceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQR-AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ-GGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ... .++.+.+.++|++.+++|+.|+++++++++|.|++++. +|+||++||.++..+.++.+.|++||
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  181 (272)
T 4dyv_A          113 GAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATK  181 (272)
T ss_dssp             CCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHH
Confidence            543 67888999999999999999999999999999987642 58999999999999999999999987

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.97  E-value=1.2e-30  Score=227.90  Aligned_cols=158  Identities=21%  Similarity=0.354  Sum_probs=123.8

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .+|.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.++   .   +.++.++.+|++|+++++++  
T Consensus        20 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~---~~~~~~~~~Dv~d~~~v~~~--   91 (266)
T 3grp_A           20 GSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---L---GKDVFVFSANLSDRKSIKQL--   91 (266)
T ss_dssp             -CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---H---CSSEEEEECCTTSHHHHHHH--
T ss_pred             cchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---h---CCceEEEEeecCCHHHHHHH--
Confidence            457789999999999999999999999999999999999987766655443   2   24677777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|+||||||.
T Consensus        92 ------------------------------------------------------------~~~~~~~~g~iD~lvnnAg~  111 (266)
T 3grp_A           92 ------------------------------------------------------------AEVAEREMEGIDILVNNAGI  111 (266)
T ss_dssp             ------------------------------------------------------------HHHHHHHHTSCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCC
Confidence                                                                        66666666677777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       112 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asK  177 (266)
T 3grp_A          112 TRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAK  177 (266)
T ss_dssp             C-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-------CHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCCCchhHHHHH
Confidence            6667788899999999999999999999999999998876 79999999999999999999999987

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.97  E-value=2.4e-30  Score=227.38  Aligned_cols=157  Identities=24%  Similarity=0.317  Sum_probs=134.0

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +..+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++      +.++.++++|++|+++++++   
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~---   91 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI------GSKAFGVRVDVSSAKDAESM---   91 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------CTTEEEEECCTTCHHHHHHH---
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEecCCCHHHHHHH---
Confidence            335688999999999999999999999999999999999887766655542      24677777888887777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|+||||||..
T Consensus        92 -----------------------------------------------------------~~~~~~~~g~iD~lv~nAg~~  112 (277)
T 4dqx_A           92 -----------------------------------------------------------VEKTTAKWGRVDVLVNNAGFG  112 (277)
T ss_dssp             -----------------------------------------------------------HHHHHHHHSCCCEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCcC
Confidence                                                                       666666667777777777777


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..+++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       113 ~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 4dqx_A          113 TTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAIADRTAYVASK  177 (277)
T ss_dssp             CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCCCCChhHHHHH
Confidence            677888999999999999999999999999999998776 79999999999999999999999987

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.97  E-value=1.6e-30  Score=228.47  Aligned_cols=157  Identities=25%  Similarity=0.333  Sum_probs=131.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .+++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++...   +.++.++.+|++|+++++++      
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~~v~~~------   91 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA---GHDVDGSSCDVTSTDEVHAA------   91 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TCCEEEEECCTTCHHHHHHH------
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHH------
Confidence            467999999999999999999999999999999999988877777666543   35677777888887777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|+||||||.....
T Consensus        92 --------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~~  115 (279)
T 3sju_A           92 --------------------------------------------------------VAAAVERFGPIGILVNSAGRNGGG  115 (279)
T ss_dssp             --------------------------------------------------------HHHHHHHHCSCCEEEECCCCCCCS
T ss_pred             --------------------------------------------------------HHHHHHHcCCCcEEEECCCCCCCC
Confidence                                                                    666666667777777777777677


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHH--HhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATS--YFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p--~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.|+++++++++|  .|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       116 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asK  179 (279)
T 3sju_A          116 ETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVMYAAPYTASK  179 (279)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCCCChhHHHHH
Confidence            888899999999999999999999999999  577665 79999999999999999999999987

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.97  E-value=1.2e-30  Score=223.91  Aligned_cols=152  Identities=22%  Similarity=0.291  Sum_probs=124.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++   +   .++.++.+|++|+++++++       
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~v~~~-------   67 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---G---NAVIGIVADLAHHEDVDVA-------   67 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G---GGEEEEECCTTSHHHHHHH-------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---c---CCceEEECCCCCHHHHHHH-------
Confidence            46899999999999999999999999999999999987777665554   1   2577777888877777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.+++|++|++|||||.....+
T Consensus        68 -------------------------------------------------------~~~~~~~~g~id~lvnnAg~~~~~~   92 (235)
T 3l6e_A           68 -------------------------------------------------------FAAAVEWGGLPELVLHCAGTGEFGP   92 (235)
T ss_dssp             -------------------------------------------------------HHHHHHHHCSCSEEEEECCCC----
T ss_pred             -------------------------------------------------------HHHHHHhcCCCcEEEECCCCCCCCC
Confidence                                                                   6666666677777777777766677


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++++++|+.|+++++++++|.|++++  |+||++||.++..+.++.+.|++||
T Consensus        93 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asK  152 (235)
T 3l6e_A           93 VGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQVGKANESLYCASK  152 (235)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCSSCSSHHHHHHHH
T ss_pred             hHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcCCCCCCcHHHHHH
Confidence            88899999999999999999999999999998764  6999999999999999999999987

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.97  E-value=1.9e-30  Score=226.02  Aligned_cols=161  Identities=16%  Similarity=0.210  Sum_probs=128.2

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ++++++||+++||||++|||+++|++|+++|++|++++|+....+++.+...+....+.++.++++|++|+++++++   
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~---   81 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKL---   81 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHH---
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH---
Confidence            45688999999999999999999999999999999998765554444444333333345677777777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|+||||||+.
T Consensus        82 -----------------------------------------------------------~~~~~~~~g~iD~lvnnAg~~  102 (262)
T 3ksu_A           82 -----------------------------------------------------------FDFAEKEFGKVDIAINTVGKV  102 (262)
T ss_dssp             -----------------------------------------------------------HHHHHHHHCSEEEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCCC
Confidence                                                                       666666777777777777777


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.|+++++++++|+|.  + .|+||++||.++..+.++.+.|++||
T Consensus       103 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~-~g~iv~isS~~~~~~~~~~~~Y~asK  165 (262)
T 3ksu_A          103 LKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--P-NGHIITIATSLLAAYTGFYSTYAGNK  165 (262)
T ss_dssp             CSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--E-EEEEEEECCCHHHHHHCCCCC-----
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--C-CCEEEEEechhhccCCCCCchhHHHH
Confidence            777888999999999999999999999999999993  2 58999999999999999999999998

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.97  E-value=2e-30  Score=225.50  Aligned_cols=155  Identities=23%  Similarity=0.288  Sum_probs=133.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +||+++||||++|||+++|++|+++|++|+++ +|+++.++++.+++...   +.++.++.+|++|+++++++       
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~-------   72 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL---GVKVLVVKANVGQPAKIKEM-------   72 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT---TCCEEEEECCTTCHHHHHHH-------
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHH-------
Confidence            58999999999999999999999999999997 78877777776666543   35677777888887777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.+++|++|++|||||.....+
T Consensus        73 -------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~~~   97 (258)
T 3oid_A           73 -------------------------------------------------------FQQIDETFGRLDVFVNNAASGVLRP   97 (258)
T ss_dssp             -------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCSC
T ss_pred             -------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCC
Confidence                                                                   6666666677777777777766778


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++.+++|+.|+++++++++|+|++++ .|+||++||.++..+.++++.|++||
T Consensus        98 ~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  158 (258)
T 3oid_A           98 VMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLENYTTVGVSK  158 (258)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBCTTCHHHHHHH
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCCCCcHHHHHHH
Confidence            88999999999999999999999999999998876 79999999999999999999999987

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.97  E-value=2e-30  Score=227.20  Aligned_cols=158  Identities=23%  Similarity=0.277  Sum_probs=131.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-------HHHHHHHHHHhCCCCCcEEEEeecCCChHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-------LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHR  114 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+.       +++..+.+...+   .++.++++|++|+++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~   78 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG---GQGLALKCDIREEDQVR   78 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT---SEEEEEECCTTCHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC---CeEEEEeCCCCCHHHHH
Confidence            36789999999999999999999999999999999998765       444444444332   46666677777776666


Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEe
Q psy9256         115 RCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILIN  194 (265)
Q Consensus       115 ~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVn  194 (265)
                      ++                                                              ++++.+++|++|++||
T Consensus        79 ~~--------------------------------------------------------------~~~~~~~~g~iD~lvn   96 (274)
T 3e03_A           79 AA--------------------------------------------------------------VAATVDTFGGIDILVN   96 (274)
T ss_dssp             HH--------------------------------------------------------------HHHHHHHHSCCCEEEE
T ss_pred             HH--------------------------------------------------------------HHHHHHHcCCCCEEEE
Confidence            66                                                              6777777777777777


Q ss_pred             cccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC--CCCCCccccCC
Q psy9256         195 NAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG--APYSGSYTDHL  265 (265)
Q Consensus       195 nAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~--~~~~~~Y~asK  265 (265)
                      |||.....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+  .++.+.|++||
T Consensus        97 nAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~asK  168 (274)
T 3e03_A           97 NASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAWWGAHTGYTLAK  168 (274)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHHHHHCHHHHHHH
T ss_pred             CCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCCCCCchHHHHH
Confidence            77777777888899999999999999999999999999998776 799999999999887  67888999987

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.97  E-value=3.4e-30  Score=227.12  Aligned_cols=158  Identities=21%  Similarity=0.274  Sum_probs=132.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-------cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-------NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHR  114 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+       .+++..+++...+   .++.++++|++|+++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG---GQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT---SEEEEEECCTTSHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHH
Confidence            3578999999999999999999999999999999999987       3555555554443   46777777777777777


Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEe
Q psy9256         115 RCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILIN  194 (265)
Q Consensus       115 ~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVn  194 (265)
                      ++                                                              ++++.+++|++|++||
T Consensus        82 ~~--------------------------------------------------------------~~~~~~~~g~id~lvn   99 (285)
T 3sc4_A           82 AA--------------------------------------------------------------VAKTVEQFGGIDICVN   99 (285)
T ss_dssp             HH--------------------------------------------------------------HHHHHHHHSCCSEEEE
T ss_pred             HH--------------------------------------------------------------HHHHHHHcCCCCEEEE
Confidence            66                                                              6666677777777777


Q ss_pred             cccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC-CCCCccccCC
Q psy9256         195 NAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA-PYSGSYTDHL  265 (265)
Q Consensus       195 nAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~-~~~~~Y~asK  265 (265)
                      |||+....++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+. ++.+.|++||
T Consensus       100 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asK  170 (285)
T 3sc4_A          100 NASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPKWLRPTPYMMAK  170 (285)
T ss_dssp             CCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSGGGSCSHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccCCCCCCchHHHHH
Confidence            77777777888999999999999999999999999999998776 7999999999998876 7889999987

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.97  E-value=1.4e-30  Score=226.04  Aligned_cols=155  Identities=24%  Similarity=0.325  Sum_probs=132.5

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .|.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++      +.++.++++|++|+++++++   
T Consensus         2 ~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~---   72 (255)
T 4eso_A            2 VMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF------GPRVHALRSDIADLNEIAVL---   72 (255)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------GGGEEEEECCTTCHHHHHHH---
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCcceEEEccCCCHHHHHHH---
Confidence            466789999999999999999999999999999999999887776665543      24677777777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|++|||||..
T Consensus        73 -----------------------------------------------------------~~~~~~~~g~id~lv~nAg~~   93 (255)
T 4eso_A           73 -----------------------------------------------------------GAAAGQTLGAIDLLHINAGVS   93 (255)
T ss_dssp             -----------------------------------------------------------HHHHHHHHSSEEEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHhCCCCEEEECCCCC
Confidence                                                                       666666777777777777777


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.++++|++.+++|+.|+++++++++|+|.+   +|+||++||.++..+.|+.+.|++||
T Consensus        94 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK  156 (255)
T 4eso_A           94 ELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADEGGHPGMSVYSASK  156 (255)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGSSBCTTBHHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhcCCCCCchHHHHHH
Confidence            7778889999999999999999999999999999854   48999999999999999999999987

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.97  E-value=4e-30  Score=221.93  Aligned_cols=156  Identities=32%  Similarity=0.423  Sum_probs=133.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++.+|++|+++++++      
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~~~~~~~~------   74 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG---AKVHVLELDVADRQGVDAA------   74 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH------
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHH------
Confidence            4789999999999999999999999999999999999887777766665432   4677778888888777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        75 --------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~~   98 (247)
T 2jah_A           75 --------------------------------------------------------VASTVEALGGLDILVNNAGIMLLG   98 (247)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCSEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666666666777777777776667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++++++|.|++++  |+||++||.++..+.|+.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK  159 (247)
T 2jah_A           99 PVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVNVRNAAVYQATK  159 (247)
T ss_dssp             CSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcCCCCCCcHHHHHH
Confidence            788899999999999999999999999999998764  9999999999999999999999987

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.97  E-value=4.3e-30  Score=223.86  Aligned_cols=157  Identities=27%  Similarity=0.387  Sum_probs=135.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.++++|++|+++++++     
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~-----   78 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG---RRALSVGTDITDDAQVAHL-----   78 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH-----
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHH-----
Confidence            35789999999999999999999999999999999999888888877776543   5677788888888887777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-c
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-Q  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-~  200 (265)
                                                                               ++++.+++|++|++|||||.. .
T Consensus        79 ---------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~  101 (264)
T 3ucx_A           79 ---------------------------------------------------------VDETMKAYGRVDVVINNAFRVPS  101 (264)
T ss_dssp             ---------------------------------------------------------HHHHHHHTSCCSEEEECCCSCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCcEEEECCCCCCC
Confidence                                                                     666666666666666766664 4


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.++++++++++|.|.+++  |+||++||.++..+.++++.|++||
T Consensus       102 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK  164 (264)
T 3ucx_A          102 MKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVRHSQAKYGAYKMAK  164 (264)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGGCCCTTCHHHHHHH
T ss_pred             CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhccCCCccHHHHHHH
Confidence            56788999999999999999999999999999998764  9999999999999999999999987

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.97  E-value=3e-30  Score=222.50  Aligned_cols=156  Identities=26%  Similarity=0.397  Sum_probs=132.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++|+++||||++|||+++|++|+++|++|++++|+ .+.++++.+++...+   .++.++++|++|+++++++      
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~------   72 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG---VDSFAIQANVADADEVKAM------   72 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---SCEEEEECCTTCHHHHHHH------
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHH------
Confidence            468999999999999999999999999999998875 456666666655443   5677777787777777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        73 --------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~~   96 (246)
T 3osu_A           73 --------------------------------------------------------IKEVVSQFGSLDVLVNNAGITRDN   96 (246)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666666677777777777777677


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.|+++++++++|+|++++ .|+||++||.++..+.|+.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (246)
T 3osu_A           97 LLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNPGQANYVATK  158 (246)
T ss_dssp             CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHHHH
Confidence            788899999999999999999999999999998876 79999999999999999999999987

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.97  E-value=4.9e-30  Score=223.57  Aligned_cols=163  Identities=27%  Similarity=0.342  Sum_probs=133.5

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .+..+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.. .+.++.++.+|++|+++++++  
T Consensus         6 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~--   82 (267)
T 1iy8_A            6 SPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-PDAEVLTTVADVSDEAQVEAY--   82 (267)
T ss_dssp             ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-TTCCEEEEECCTTSHHHHHHH--
T ss_pred             CCCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEEccCCCHHHHHHH--
Confidence            34456889999999999999999999999999999999999887777766665432 124567777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|+||||||.
T Consensus        83 ------------------------------------------------------------~~~~~~~~g~id~lv~nAg~  102 (267)
T 1iy8_A           83 ------------------------------------------------------------VTATTERFGRIDGFFNNAGI  102 (267)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCSEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCc
Confidence                                                                        66666666666777777766


Q ss_pred             ccc-ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQR-AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ... .++.+.+.++|++++++|+.|++++++.++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  169 (267)
T 1iy8_A          103 EGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAAAK  169 (267)
T ss_dssp             CCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCCCCCccHHHHH
Confidence            555 6778889999999999999999999999999998775 79999999999999999999999987

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.7e-30  Score=229.63  Aligned_cols=161  Identities=31%  Similarity=0.425  Sum_probs=138.2

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCC---eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGA---KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      +.+++||+++||||++|||+++|++|+++|+   +|++++|+.+.++++.+++.... .+.++.++++|++|+++++++ 
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~d~~~v~~~-  105 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF-PNAKVHVAQLDITQAEKIKPF-  105 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC-TTCEEEEEECCTTCGGGHHHH-
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC-CCCeEEEEECCCCCHHHHHHH-
Confidence            4568999999999999999999999999998   99999999988888877776542 134667777777777777776 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.+++|++|+||||||
T Consensus       106 -------------------------------------------------------------~~~~~~~~g~iD~lVnnAG  124 (287)
T 3rku_A          106 -------------------------------------------------------------IENLPQEFKDIDILVNNAG  124 (287)
T ss_dssp             -------------------------------------------------------------HHTSCGGGCSCCEEEECCC
T ss_pred             -------------------------------------------------------------HHHHHHhcCCCCEEEECCC
Confidence                                                                         6777777777777788777


Q ss_pred             ccc-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQ-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ... ..++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asK  192 (287)
T 3rku_A          125 KALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYPTGSIYCASK  192 (287)
T ss_dssp             CCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCCCCCchHHHHH
Confidence            764 56788999999999999999999999999999998876 79999999999999999999999987

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.97  E-value=7.8e-30  Score=223.12  Aligned_cols=155  Identities=26%  Similarity=0.343  Sum_probs=131.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++.+++..+++      +.++.++.+|++|+++++++     
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~-----   75 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV------GRGAVHHVVDLTNEVSVRAL-----   75 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH------CTTCEEEECCTTCHHHHHHH-----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCCeEEEECCCCCHHHHHHH-----
Confidence            4688999999999999999999999999999999999999888776654      24677788888888888877     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-c
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-Q  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-~  200 (265)
                                                                               ++++.+++|++|++|||||.. .
T Consensus        76 ---------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~   98 (271)
T 3tzq_B           76 ---------------------------------------------------------IDFTIDTFGRLDIVDNNAAHSDP   98 (271)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCT
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     555555555566666666654 2


Q ss_pred             -cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 -RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 -~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                       ..++.+.+.++|++.+++|+.|+++++++++|+|++++ .|+||++||.++..+.++.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  163 (271)
T 3tzq_B           99 ADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYDMSTAYACTK  163 (271)
T ss_dssp             TCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCSSCHHHHHHH
T ss_pred             CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCCCChHHHHHH
Confidence             34577889999999999999999999999999998876 79999999999999999999999987

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.97  E-value=7.4e-30  Score=228.58  Aligned_cols=164  Identities=24%  Similarity=0.366  Sum_probs=140.2

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      |.|.++.||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+. +.++.++.+|++|+++++++  
T Consensus         1 M~m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~--   77 (319)
T 3ioy_A            1 MSLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS-GPEVMGVQLDVASREGFKMA--   77 (319)
T ss_dssp             --CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-GGGEEEEECCTTCHHHHHHH--
T ss_pred             CCccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEEECCCCCHHHHHHH--
Confidence            346788999999999999999999999999999999999999888888777765431 23677777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+.+|++|++|||||+
T Consensus        78 ------------------------------------------------------------~~~~~~~~g~id~lv~nAg~   97 (319)
T 3ioy_A           78 ------------------------------------------------------------ADEVEARFGPVSILCNNAGV   97 (319)
T ss_dssp             ------------------------------------------------------------HHHHHHHTCCEEEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHhCCCCCEEEECCCc
Confidence                                                                        77777777778888888887


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh-----cCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAR-----EQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~-----~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...+++.+.+.++|++++++|+.|++++++.++|.|.++     +..|+||++||.++..+.|+++.|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~aSK  169 (319)
T 3ioy_A           98 NLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTK  169 (319)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHHHHH
Confidence            777888999999999999999999999999999999875     2369999999999999999999999987

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.97  E-value=6.5e-30  Score=220.25  Aligned_cols=156  Identities=25%  Similarity=0.416  Sum_probs=132.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec-CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR-SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      |+||+++||||++|||++++++|+++|++|++++| +++.++++.+++...+   .++.++++|++|+++++++      
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~------   72 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG---SDAIAVRADVANAEDVTNM------   72 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHH------
Confidence            67899999999999999999999999999999999 6666666666655432   4677777888887777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        73 --------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~~   96 (246)
T 2uvd_A           73 --------------------------------------------------------VKQTVDVFGQVDILVNNAGVTKDN   96 (246)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCB
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666666666777777777766667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|++++++.++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  158 (246)
T 2uvd_A           97 LLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNPGQANYVAAK  158 (246)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTBHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCCCCchHHHHH
Confidence            788899999999999999999999999999998775 69999999999999999999999987

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.96  E-value=8.8e-30  Score=222.46  Aligned_cols=161  Identities=24%  Similarity=0.375  Sum_probs=133.2

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHH-HHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLC-VQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      .+..+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++ ...+   .++.++.+|++|+++++++ 
T Consensus        14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~~~~~v~~~-   89 (267)
T 1vl8_A           14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG---VETMAFRCDVSNYEEVKKL-   89 (267)
T ss_dssp             ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC---CCEEEEECCTTCHHHHHHH-
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHH-
Confidence            4556789999999999999999999999999999999999987777666655 2222   4566677777777777777 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.+++|++|++|||||
T Consensus        90 -------------------------------------------------------------~~~~~~~~g~iD~lvnnAg  108 (267)
T 1vl8_A           90 -------------------------------------------------------------LEAVKEKFGKLDTVVNAAG  108 (267)
T ss_dssp             -------------------------------------------------------------HHHHHHHHSCCCEEEECCC
T ss_pred             -------------------------------------------------------------HHHHHHHcCCCCEEEECCC
Confidence                                                                         6666666677777777777


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc-cccCCCCCCccccCC
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA-GIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a-g~~~~~~~~~Y~asK  265 (265)
                      .....++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.+ +..+.++.+.|++||
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asK  176 (267)
T 1vl8_A          109 INRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYAASK  176 (267)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred             cCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccCCCCChhHHHHH
Confidence            76667788899999999999999999999999999998765 69999999999 888888999999987

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.96  E-value=8.7e-30  Score=219.14  Aligned_cols=157  Identities=25%  Similarity=0.355  Sum_probs=137.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.++.+|++|+++++++      
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~------   72 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG---FKARGLVLNISDIESIQNF------   72 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHH------
Confidence            4679999999999999999999999999999999999888888777766543   5677778888887777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.++++++|++|||||.....
T Consensus        73 --------------------------------------------------------~~~~~~~~~~id~li~~Ag~~~~~   96 (247)
T 3lyl_A           73 --------------------------------------------------------FAEIKAENLAIDILVNNAGITRDN   96 (247)
T ss_dssp             --------------------------------------------------------HHHHHHTTCCCSEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666777777777777777777777


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+.|+.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (247)
T 3lyl_A           97 LMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGNPGQTNYCAAK  158 (247)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCcHHHHHHH
Confidence            788899999999999999999999999999998876 79999999999999999999999987

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.96  E-value=9.2e-30  Score=223.87  Aligned_cols=160  Identities=21%  Similarity=0.325  Sum_probs=122.7

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec-CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR-SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      |.++++|+++||||++|||+++|++|+++|++|++++| +++.++++.+++...+   .++.++++|++|+++++++   
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~---   97 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG---ARVIFLRADLADLSSHQAT---   97 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECCTTSGGGHHHH---
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHH---
Confidence            45688999999999999999999999999999999996 5556666666655443   5677788888888877777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc-
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR-  198 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~-  198 (265)
                                                                                 ++++.+++|++|+||||||. 
T Consensus        98 -----------------------------------------------------------~~~~~~~~g~iD~lvnnAg~~  118 (280)
T 4da9_A           98 -----------------------------------------------------------VDAVVAEFGRIDCLVNNAGIA  118 (280)
T ss_dssp             -----------------------------------------------------------HHHHHHHHSCCCEEEEECC--
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCcc
Confidence                                                                       55555555556666666665 


Q ss_pred             -cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC--CceEEEEcccccccCCCCCCccccCC
Q psy9256         199 -SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ--GGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 -~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~--~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                       ....++.+.+.++|++.+++|+.|+++++++++|.|++++.  .|+||++||.++..+.|+.+.|++||
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  188 (280)
T 4da9_A          119 SIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSK  188 (280)
T ss_dssp             ----CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHHHH
T ss_pred             ccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHHHH
Confidence             34567888999999999999999999999999999987642  58999999999999999999999987

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.96  E-value=1.5e-29  Score=221.39  Aligned_cols=158  Identities=25%  Similarity=0.343  Sum_probs=134.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++.+|++|+++++++     
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~-----   88 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG---LNVEGSVCDLLSRTERDKL-----   88 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH-----
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHH-----
Confidence            35789999999999999999999999999999999999877777666665432   4677777888887777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc-ccccEEEecccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQ  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~-g~ldilVnnAG~~~  200 (265)
                                                                               ++++.+.+ |++|++|||||...
T Consensus        89 ---------------------------------------------------------~~~~~~~~~g~id~lv~nAg~~~  111 (273)
T 1ae1_A           89 ---------------------------------------------------------MQTVAHVFDGKLNILVNNAGVVI  111 (273)
T ss_dssp             ---------------------------------------------------------HHHHHHHTTSCCCEEEECCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCcEEEECCCCCC
Confidence                                                                     66666666 67777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus       112 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  175 (273)
T 1ae1_A          112 HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSASK  175 (273)
T ss_dssp             CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCCCcchhHHHH
Confidence            67788899999999999999999999999999998775 69999999999999999999999987

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.96  E-value=1.6e-29  Score=219.50  Aligned_cols=158  Identities=24%  Similarity=0.349  Sum_probs=134.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...   +.++.++.+|++|+++++++     
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~-----   76 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK---GFKVEASVCDLSSRSERQEL-----   76 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHH-----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHH-----
Confidence            3578999999999999999999999999999999999987777766666543   24677777888887777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc-ccccEEEecccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQ  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~-g~ldilVnnAG~~~  200 (265)
                                                                               ++++.+++ +++|++|||||...
T Consensus        77 ---------------------------------------------------------~~~~~~~~~g~id~lv~~Ag~~~   99 (260)
T 2ae2_A           77 ---------------------------------------------------------MNTVANHFHGKLNILVNNAGIVI   99 (260)
T ss_dssp             ---------------------------------------------------------HHHHHHHTTTCCCEEEECCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCCEEEECCCCCC
Confidence                                                                     66666666 66777777777666


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus       100 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (260)
T 2ae2_A          100 YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATK  163 (260)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCcchHHHHH
Confidence            66778899999999999999999999999999998765 69999999999999999999999987

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.96  E-value=1.7e-29  Score=218.41  Aligned_cols=162  Identities=20%  Similarity=0.325  Sum_probs=132.3

Q ss_pred             hhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEe-cCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          38 NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        38 ~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ..+....++|+++||||++|||+++|++|+++|++|++++ |+.+..++..+.+...+   .++.++.+|++|+++++++
T Consensus         5 ~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~   81 (256)
T 3ezl_A            5 HHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALG---FDFYASEGNVGDWDSTKQA   81 (256)
T ss_dssp             --------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTT---CCCEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CeeEEEecCCCCHHHHHHH
Confidence            4455678899999999999999999999999999999988 66677766666655443   4667777777777777777


Q ss_pred             HHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecc
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA  196 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnA  196 (265)
                                                                                    ++++.+++|++|++||||
T Consensus        82 --------------------------------------------------------------~~~~~~~~g~id~lv~~A   99 (256)
T 3ezl_A           82 --------------------------------------------------------------FDKVKAEVGEIDVLVNNA   99 (256)
T ss_dssp             --------------------------------------------------------------HHHHHHHTCCEEEEEECC
T ss_pred             --------------------------------------------------------------HHHHHHhcCCCCEEEECC
Confidence                                                                          666667777777777777


Q ss_pred             cccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         197 GRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       197 G~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |.....++.+.+.++|++.+++|+.|++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       100 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  167 (256)
T 3ezl_A          100 GITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAK  167 (256)
T ss_dssp             CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCSCCHHHHHHH
T ss_pred             CCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCCCCcccHHHH
Confidence            777777788899999999999999999999999999998876 79999999999999999999999987

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.96  E-value=1.2e-29  Score=221.04  Aligned_cols=158  Identities=18%  Similarity=0.143  Sum_probs=121.9

Q ss_pred             HhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHH
Q psy9256          36 KINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRR  115 (265)
Q Consensus        36 ~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (265)
                      +..+.+.+++||+++||||++|||+++|++|+++|++|++++|+++.+.+.   +.+.     .+.++.+|++|++++++
T Consensus        17 ~~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~-----~~~~~~~Dv~~~~~v~~   88 (260)
T 3gem_A           17 LYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQA-----GAVALYGDFSCETGIMA   88 (260)
T ss_dssp             ----------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHHH-----TCEEEECCTTSHHHHHH
T ss_pred             cccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHhc-----CCeEEECCCCCHHHHHH
Confidence            344566778999999999999999999999999999999999998765332   2222     25567777777777777


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEec
Q psy9256         116 CFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       116 ~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn  195 (265)
                      +                                                              ++++.+++|++|+||||
T Consensus        89 ~--------------------------------------------------------------~~~~~~~~g~iD~lv~n  106 (260)
T 3gem_A           89 F--------------------------------------------------------------IDLLKTQTSSLRAVVHN  106 (260)
T ss_dssp             H--------------------------------------------------------------HHHHHHHCSCCSEEEEC
T ss_pred             H--------------------------------------------------------------HHHHHHhcCCCCEEEEC
Confidence            7                                                              66666666666666666


Q ss_pred             ccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         196 AGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       196 AG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ||.....+ .+.++++|++++++|+.|+++++++++|+|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       107 Ag~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  174 (260)
T 3gem_A          107 ASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGSSKHIAYCATK  174 (260)
T ss_dssp             CCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCCSSCHHHHHHH
T ss_pred             CCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCcHhHHHHH
Confidence            66654444 5677899999999999999999999999998775 79999999999999999999999987

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.96  E-value=1.7e-29  Score=228.88  Aligned_cols=160  Identities=23%  Similarity=0.288  Sum_probs=133.6

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-------HHHHHHHHHHhCCCCCcEEEEeecCCChHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-------LERVKNLCVQAGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (265)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|+.+.       ++++.+++...+   .++.++.+|++|+++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g---~~~~~~~~Dv~d~~~  115 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG---GKALPCIVDVRDEQQ  115 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTT---CEEEEEECCTTCHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcC---CeEEEEEccCCCHHH
Confidence            4567899999999999999999999999999999999998875       344444444432   466667777777777


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEE
Q psy9256         113 HRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDIL  192 (265)
Q Consensus       113 ~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldil  192 (265)
                      ++++                                                              ++++.+++|++|+|
T Consensus       116 v~~~--------------------------------------------------------------~~~~~~~~g~iDil  133 (346)
T 3kvo_A          116 ISAA--------------------------------------------------------------VEKAIKKFGGIDIL  133 (346)
T ss_dssp             HHHH--------------------------------------------------------------HHHHHHHHSCCCEE
T ss_pred             HHHH--------------------------------------------------------------HHHHHHHcCCCCEE
Confidence            6666                                                              66666677777777


Q ss_pred             EecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC--CCCCCccccCC
Q psy9256         193 INNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG--APYSGSYTDHL  265 (265)
Q Consensus       193 VnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~--~~~~~~Y~asK  265 (265)
                      |||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+  .++.+.|++||
T Consensus       134 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~~~~~~~~Y~aSK  207 (346)
T 3kvo_A          134 VNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVWFKQHCAYTIAK  207 (346)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGGGTSSSHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCCCCCCchHHHHHH
Confidence            7777777777888999999999999999999999999999998775 799999999999887  78889999987

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.96  E-value=1.7e-29  Score=219.71  Aligned_cols=162  Identities=25%  Similarity=0.346  Sum_probs=138.8

Q ss_pred             hccccCCcEEEEcCCC-CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGAS-SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        40 ~~~~l~gk~vlItGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .+..++||+++||||+ +|||+++|++|+++|++|++++|+.+.++++.+++.+..  +.++.++++|++|+++++++  
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~--   91 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG--LGRVEAVVCDVTSTEAVDAL--   91 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC--SSCEEEEECCTTCHHHHHHH--
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC--CCceEEEEeCCCCHHHHHHH--
Confidence            4557899999999997 699999999999999999999999888887777665432  35677788888888877777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.++++++|++|||||.
T Consensus        92 ------------------------------------------------------------~~~~~~~~g~id~li~~Ag~  111 (266)
T 3o38_A           92 ------------------------------------------------------------ITQTVEKAGRLDVLVNNAGL  111 (266)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHhCCCcEEEECCCc
Confidence                                                                        66666666777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++.+++|+.++++++++++|+|.+++.+|+||++||.++..+.++++.|++||
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  178 (266)
T 3o38_A          112 GGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAK  178 (266)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHH
Confidence            7677788899999999999999999999999999998875479999999999999999999999987

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.96  E-value=5.7e-30  Score=222.59  Aligned_cols=159  Identities=23%  Similarity=0.331  Sum_probs=129.3

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      |.+.+++||+++||||++|||+++|++|+++|++|+++ .|+.+..++..+++.+.   +.++.++.+|++|+++++++ 
T Consensus         1 M~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~-   76 (259)
T 3edm_A            1 MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL---GRSALAIKADLTNAAEVEAA-   76 (259)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT---TSCCEEEECCTTCHHHHHHH-
T ss_pred             CCccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHH-
Confidence            34678899999999999999999999999999999998 45555555555555433   35677777777777777777 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.+++|++|++|||||
T Consensus        77 -------------------------------------------------------------~~~~~~~~g~id~lv~nAg   95 (259)
T 3edm_A           77 -------------------------------------------------------------ISAAADKFGEIHGLVHVAG   95 (259)
T ss_dssp             -------------------------------------------------------------HHHHHHHHCSEEEEEECCC
T ss_pred             -------------------------------------------------------------HHHHHHHhCCCCEEEECCC
Confidence                                                                         6666666677777777777


Q ss_pred             cc-ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-cCCCCCCccccCC
Q psy9256         198 RS-QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-VGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-~~~~~~~~Y~asK  265 (265)
                      .. ...++.+.+.++|++++++|+.|+++++++++|.|.+   +|+||++||.++. .+.++.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~Y~asK  162 (259)
T 3edm_A           96 GLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGRDGGGPGALAYATSK  162 (259)
T ss_dssp             CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHCCSTTCHHHHHHH
T ss_pred             ccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhccCCCCCcHHHHHHH
Confidence            65 5577889999999999999999999999999999965   4899999999998 6888999999987

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.96  E-value=1.9e-29  Score=219.12  Aligned_cols=157  Identities=26%  Similarity=0.353  Sum_probs=131.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      |+||+++||||++|||++++++|+++|++|++++|+++. ++++.+++....  +.++.++.+|++|+++++++      
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~------   73 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--GVKVLYDGADLSKGEAVRGL------   73 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH--TSCEEEECCCTTSHHHHHHH------
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc--CCcEEEEECCCCCHHHHHHH------
Confidence            678999999999999999999999999999999998876 666666554431  13566677777777777776      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        74 --------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~~~~~   97 (260)
T 1x1t_A           74 --------------------------------------------------------VDNAVRQMGRIDILVNNAGIQHTA   97 (260)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCSEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHhcCCCCEEEECCCCCCCC
Confidence                                                                    666666667777777777766666


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        98 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  159 (260)
T 1x1t_A           98 LIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCCCCchHHHHH
Confidence            788899999999999999999999999999998775 69999999999999999999999987

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.96  E-value=1.4e-29  Score=217.67  Aligned_cols=162  Identities=27%  Similarity=0.346  Sum_probs=135.8

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecC--CChHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV--TQTKYHRRC  116 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~  116 (265)
                      +++..++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+.  .+..++.+|+  +++++++++
T Consensus         7 ~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~d~d~~~~~~~~~~   84 (247)
T 3i1j_A            7 AHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ--PQPLIIALNLENATAQQYREL   84 (247)
T ss_dssp             CCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS--CCCEEEECCTTTCCHHHHHHH
T ss_pred             CCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC--CCceEEEeccccCCHHHHHHH
Confidence            445678999999999999999999999999999999999999888888887776542  3444555555  777777777


Q ss_pred             HHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecc
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA  196 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnA  196 (265)
                                                                                    ++++.+++|++|++||||
T Consensus        85 --------------------------------------------------------------~~~~~~~~g~id~lv~nA  102 (247)
T 3i1j_A           85 --------------------------------------------------------------AARVEHEFGRLDGLLHNA  102 (247)
T ss_dssp             --------------------------------------------------------------HHHHHHHHSCCSEEEECC
T ss_pred             --------------------------------------------------------------HHHHHHhCCCCCEEEECC
Confidence                                                                          666666666667777777


Q ss_pred             ccc-ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         197 GRS-QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       197 G~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |.. ...++.+.+.++|++.+++|+.|++++++.++|+|++++ .|+||++||.++..+.++.+.|++||
T Consensus       103 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  171 (247)
T 3i1j_A          103 SIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRANWGAYGVSK  171 (247)
T ss_dssp             CCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             ccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCCCcchhHHHH
Confidence            664 446788899999999999999999999999999998765 79999999999999999999999987

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.96  E-value=1.1e-29  Score=220.91  Aligned_cols=157  Identities=27%  Similarity=0.390  Sum_probs=132.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||++++++|+++|++|++++|+++.++++.+++...   +.++.++++|++|+++++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~------   74 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK---GVEARSYVCDVTSEEAVIGT------   74 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TSCEEEEECCTTCHHHHHHH------
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHH------
Confidence            578999999999999999999999999999999999887777666655433   34677777888887777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-cc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-QR  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-~~  201 (265)
                                                                              ++++.+++|++|++|||||.. ..
T Consensus        75 --------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~~   98 (262)
T 1zem_A           75 --------------------------------------------------------VDSVVRDFGKIDFLFNNAGYQGAF   98 (262)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHhCCCCEEEECCCCCCCC
Confidence                                                                    666666666667777777765 55


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||.++..+.|+.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  161 (262)
T 1zem_A           99 APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSK  161 (262)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCCchHHHHH
Confidence            6788899999999999999999999999999998775 79999999999999999999999987

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.96  E-value=1e-29  Score=220.36  Aligned_cols=156  Identities=22%  Similarity=0.244  Sum_probs=118.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++..++..+++      +.++.++++|++|+++++++++.  
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~--   74 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL------GAAVRFRNADVTNEADATAALAF--   74 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHH--
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCceEEEEccCCCHHHHHHHHHH--
Confidence            3578999999999999999999999999999999999988877665543      24567777888888777777444  


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                                  +.+++|++|+||||||....
T Consensus        75 ------------------------------------------------------------~~~~~g~id~lv~nAg~~~~   94 (257)
T 3tpc_A           75 ------------------------------------------------------------AKQEFGHVHGLVNCAGTAPG   94 (257)
T ss_dssp             ------------------------------------------------------------HHHHHSCCCEEEECCCCCCC
T ss_pred             ------------------------------------------------------------HHHHcCCCCEEEECCCCCCC
Confidence                                                                        44445555555555554433


Q ss_pred             cc----ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh-----cCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AA----WEDIELEVDRELFELNVFSVLSLSRIATSYFLAR-----EQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~-----~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+    ..+.+.++|++.+++|+.|+++++++++|.|+++     +..|+||++||.++..+.++.+.|++||
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  167 (257)
T 3tpc_A           95 EKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASK  167 (257)
T ss_dssp             CCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchHHHH
Confidence            32    2367889999999999999999999999999875     2369999999999999999999999987

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.96  E-value=2.1e-29  Score=221.11  Aligned_cols=161  Identities=27%  Similarity=0.370  Sum_probs=135.8

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ++|.++++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.++.+|++|+++++++  
T Consensus        15 ~~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~~~~v~~~--   89 (277)
T 2rhc_B           15 SHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG---VEADGRTCDVRSVPEIEAL--   89 (277)
T ss_dssp             TTTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH--
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHH--
Confidence            34556889999999999999999999999999999999999877777666665433   4567777888877777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|++|||||.
T Consensus        90 ------------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~  109 (277)
T 2rhc_B           90 ------------------------------------------------------------VAAVVERYGPVDVLVNNAGR  109 (277)
T ss_dssp             ------------------------------------------------------------HHHHHHHTCSCSEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHhCCCCEEEECCCC
Confidence                                                                        66666666777777777776


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHH--hhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSY--FLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~--l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++.+++|+.|+++++++++|.  |++++ .|+||++||.++..+.++.+.|++||
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 2rhc_B          110 PGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSASK  177 (277)
T ss_dssp             CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCCCCCccHHHHH
Confidence            66667788999999999999999999999999999  88765 69999999999999999999999987

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.96  E-value=3e-29  Score=216.60  Aligned_cols=154  Identities=23%  Similarity=0.290  Sum_probs=129.2

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++||+++||||++|||+++|++|+++|++|++++|++ +.+++   .+.+.   +.++.++++|++|+++++++     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~---~~~~~~~~~Dv~~~~~v~~~-----   72 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL---GRRVLTVKCDVSQPGDVEAF-----   72 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT---TCCEEEEECCTTCHHHHHHH-----
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc---CCcEEEEEeecCCHHHHHHH-----
Confidence            47899999999999999999999999999999999987 54443   33332   24677777888887777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|++|||||....
T Consensus        73 ---------------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~   95 (249)
T 2ew8_A           73 ---------------------------------------------------------GKQVISTFGRCDILVNNAGIYPL   95 (249)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     66666666677777777776666


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  158 (249)
T 2ew8_A           96 IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTK  158 (249)
T ss_dssp             CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCchhHHHHH
Confidence            6788899999999999999999999999999998775 79999999999999999999999987

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.96  E-value=7.9e-30  Score=222.81  Aligned_cols=151  Identities=30%  Similarity=0.354  Sum_probs=127.2

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+.++++.         ..++.++.+|++|+++++++      
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dv~d~~~v~~~------   77 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN---------LPNTLCAQVDVTDKYTFDTA------   77 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC---------CTTEEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh---------cCCceEEEecCCCHHHHHHH------
Confidence            478999999999999999999999999999999999865443221         13566667777777776666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+.+|++|+||||||.....
T Consensus        78 --------------------------------------------------------~~~~~~~~g~iD~lvnnAg~~~~~  101 (266)
T 3p19_A           78 --------------------------------------------------------ITRAEKIYGPADAIVNNAGMMLLG  101 (266)
T ss_dssp             --------------------------------------------------------HHHHHHHHCSEEEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHCCCCCEEEECCCcCCCC
Confidence                                                                    666777777777777777777777


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       102 ~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~~~~~~Y~asK  163 (266)
T 3p19_A          102 QIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFPDHAAYCGTK  163 (266)
T ss_dssp             CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCCCCCchHHHHH
Confidence            888999999999999999999999999999998876 79999999999999999999999987

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=2.7e-29  Score=222.77  Aligned_cols=163  Identities=28%  Similarity=0.423  Sum_probs=131.7

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .+|.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+....++.++.+|++|+++++++  
T Consensus        19 ~~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~--   96 (297)
T 1xhl_A           19 SHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI--   96 (297)
T ss_dssp             ----CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH--
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHH--
Confidence            345568899999999999999999999999999999999998888777766655431112667777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|+||||||.
T Consensus        97 ------------------------------------------------------------~~~~~~~~g~iD~lvnnAG~  116 (297)
T 1xhl_A           97 ------------------------------------------------------------INTTLAKFGKIDILVNNAGA  116 (297)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHhcCCCCEEEECCCc
Confidence                                                                        55555566666666666666


Q ss_pred             ccccc--ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC-CCCCccccCC
Q psy9256         199 SQRAA--WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA-PYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~-~~~~~Y~asK  265 (265)
                      ....+  +.+.+.++|++++++|+.|+++++++++|.|++++  |+||++||.++..+. ++.+.|++||
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~~~~~~~~~~Y~asK  184 (297)
T 1xhl_A          117 NLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQAHSGYPYYACAK  184 (297)
T ss_dssp             CCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGSSSCCTTSHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhccCCCCCcchHHHHH
Confidence            55555  78889999999999999999999999999998754  999999999999888 8899999987

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.96  E-value=1.8e-29  Score=223.07  Aligned_cols=179  Identities=17%  Similarity=0.101  Sum_probs=126.4

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEe-cCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .|.++++|+++||||++|||+++|++|+++|++|++++ |+++.++++.+++....  +.++.++++|++|+++..... 
T Consensus         3 ~m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~~-   79 (291)
T 1e7w_A            3 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR--PNSAITVQADLSNVATAPVSG-   79 (291)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSCBCCCC--
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc--CCeeEEEEeecCCcccccccc-
Confidence            46678999999999999999999999999999999999 98888877777665222  357888999999987000000 


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                  .--.+..+..++++++++++.+++|++|+||||||.
T Consensus        80 --------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~  115 (291)
T 1e7w_A           80 --------------------------------------------ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS  115 (291)
T ss_dssp             -----------------------------------------------CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             --------------------------------------------cccccccchHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence                                                        000011111223333344444455555555555555


Q ss_pred             cccccccccc--------------hHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-----CceEEEEcccccccCCCCCC
Q psy9256         199 SQRAAWEDIE--------------LEVDRELFELNVFSVLSLSRIATSYFLAREQ-----GGHLVVTSSIAGIVGAPYSG  259 (265)
Q Consensus       199 ~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-----~g~IV~isS~ag~~~~~~~~  259 (265)
                      ....++.+.+              .++|++++++|+.++++++++++|.|.+++.     .|+||++||.++..+.|+.+
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~  195 (291)
T 1e7w_A          116 FYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYT  195 (291)
T ss_dssp             CCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCH
T ss_pred             CCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCc
Confidence            4444455555              8999999999999999999999999986531     48999999999999999999


Q ss_pred             ccccCC
Q psy9256         260 SYTDHL  265 (265)
Q Consensus       260 ~Y~asK  265 (265)
                      .|++||
T Consensus       196 ~Y~asK  201 (291)
T 1e7w_A          196 IYTMAK  201 (291)
T ss_dssp             HHHHHH
T ss_pred             hhHHHH
Confidence            999987

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.96  E-value=1.6e-29  Score=219.12  Aligned_cols=154  Identities=28%  Similarity=0.325  Sum_probs=129.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++      +.++.++.+|++|+++++++      
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~------   69 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQHLDVTIEEDWQRV------   69 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------GGGEEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceeEEEecCCCHHHHHHH------
Confidence            578999999999999999999999999999999999876665544332      24566777777777777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        70 --------------------------------------------------------~~~~~~~~g~iD~lv~nAg~~~~~   93 (254)
T 1hdc_A           70 --------------------------------------------------------VAYAREEFGSVDGLVNNAGISTGM   93 (254)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCS
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666666666777777777766666


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.|++++++.++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        94 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  155 (254)
T 1hdc_A           94 FLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASK  155 (254)
T ss_dssp             CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCchhHHHHH
Confidence            778889999999999999999999999999998775 79999999999999999999999987

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.96  E-value=3e-29  Score=217.97  Aligned_cols=158  Identities=29%  Similarity=0.334  Sum_probs=133.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||++++++|+++|++|++++|+++.++++.+++....  +.++.++++|++|+++++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~------   75 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF--GVRVLEVAVDVATPEGVDAV------   75 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTSHHHHHHH------
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHH------
Confidence            4789999999999999999999999999999999999877777666554431  23566777777777777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        76 --------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~~~~   99 (263)
T 3ai3_A           76 --------------------------------------------------------VESVRSSFGGADILVNNAGTGSNE   99 (263)
T ss_dssp             --------------------------------------------------------HHHHHHHHSSCSEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666666667777777777776667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       100 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  161 (263)
T 3ai3_A          100 TIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLWYEPIYNVTK  161 (263)
T ss_dssp             CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCcchHHHHH
Confidence            788899999999999999999999999999998765 79999999999999999999999987

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.96  E-value=1.8e-29  Score=220.72  Aligned_cols=153  Identities=24%  Similarity=0.357  Sum_probs=126.4

Q ss_pred             hhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          37 INKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        37 ~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ...+..+++||++|||||++|||+++|++|+++|++|++++|+++...             .....+++|++|+++++++
T Consensus         5 ~~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~Dv~~~~~v~~~   71 (269)
T 3vtz_A            5 HHHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-------------NVSDHFKIDVTNEEEVKEA   71 (269)
T ss_dssp             -----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-------------TSSEEEECCTTCHHHHHHH
T ss_pred             ccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-------------CceeEEEecCCCHHHHHHH
Confidence            345667889999999999999999999999999999999999865431             2345566777777776666


Q ss_pred             HHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecc
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA  196 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnA  196 (265)
                                                                                    ++++.+++|++|+|||||
T Consensus        72 --------------------------------------------------------------~~~~~~~~g~iD~lv~nA   89 (269)
T 3vtz_A           72 --------------------------------------------------------------VEKTTKKYGRIDILVNNA   89 (269)
T ss_dssp             --------------------------------------------------------------HHHHHHHHSCCCEEEECC
T ss_pred             --------------------------------------------------------------HHHHHHHcCCCCEEEECC
Confidence                                                                          666666677777777777


Q ss_pred             cccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         197 GRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       197 G~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |.....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++.+.|++||
T Consensus        90 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  157 (269)
T 3vtz_A           90 GIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATKNAAAYVTSK  157 (269)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCChhHHHHH
Confidence            777677888899999999999999999999999999998876 79999999999999999999999987

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.96  E-value=2.6e-29  Score=219.57  Aligned_cols=159  Identities=27%  Similarity=0.384  Sum_probs=132.0

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      ..+.+++||+++||||++|||+++|++|+++|++|++++++ .+.++++.+++...+   .++.++++|++|+++++++ 
T Consensus        11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~-   86 (270)
T 3is3_A           11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG---SDAIAIKADIRQVPEIVKL-   86 (270)
T ss_dssp             CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHH-
T ss_pred             cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHH-
Confidence            34567899999999999999999999999999999998765 445566666655543   5677777777777777777 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.+++|++|+||||||
T Consensus        87 -------------------------------------------------------------~~~~~~~~g~id~lvnnAg  105 (270)
T 3is3_A           87 -------------------------------------------------------------FDQAVAHFGHLDIAVSNSG  105 (270)
T ss_dssp             -------------------------------------------------------------HHHHHHHHSCCCEEECCCC
T ss_pred             -------------------------------------------------------------HHHHHHHcCCCCEEEECCC
Confidence                                                                         6666666777777777777


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc-cccCCCCCCccccCC
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA-GIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a-g~~~~~~~~~Y~asK  265 (265)
                      ....+++.+.+.++|++++++|+.|+++++++++|+|.+   +|+||++||.+ +..+.|+.+.|++||
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~Y~asK  171 (270)
T 3is3_A          106 VVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPKHSLYSGSK  171 (270)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTTTCCCTTCHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhccCCCCCCchhHHHH
Confidence            777778889999999999999999999999999999965   58999999988 567889999999987

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=2.6e-29  Score=220.54  Aligned_cols=160  Identities=29%  Similarity=0.454  Sum_probs=129.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+....++.++++|++|+++++++     
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~-----   76 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQI-----   76 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHH-----
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHH-----
Confidence            457899999999999999999999999999999999998877776666544321112677777888887777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||....
T Consensus        77 ---------------------------------------------------------~~~~~~~~g~iD~lv~nAg~~~~   99 (280)
T 1xkq_A           77 ---------------------------------------------------------INSTLKQFGKIDVLVNNAGAAIP   99 (280)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCCEEEECCCCCCC
Confidence                                                                     55555555556666666665544


Q ss_pred             cc----ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC-CCCCccccCC
Q psy9256         202 AA----WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA-PYSGSYTDHL  265 (265)
Q Consensus       202 ~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~-~~~~~Y~asK  265 (265)
                      .+    +.+.+.++|++.+++|+.+++++++.++|.|.+++  |+||++||.++..+. ++.+.|++||
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~~Y~asK  166 (280)
T 1xkq_A          100 DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQPDFLYYAIAK  166 (280)
T ss_dssp             CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSCCCSSHHHHHHH
T ss_pred             CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCccccCCCCCcccHHHHHH
Confidence            44    67888999999999999999999999999998764  999999999999887 8889999987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.96  E-value=1.7e-29  Score=221.34  Aligned_cols=157  Identities=27%  Similarity=0.384  Sum_probs=120.8

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC------------CCcHHHHHHHHHHhCCCCCcEEEEeecC
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS------------SSNLERVKNLCVQAGAHPQSIYTLTLDV  107 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~  107 (265)
                      +..++.||+++||||++|||+++|++|+++|++|++++|+            .+.+++..+.+...+   .++.++++|+
T Consensus         7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~   83 (278)
T 3sx2_A            7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG---SRIVARQADV   83 (278)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT---CCEEEEECCT
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC---CeEEEEeCCC
Confidence            4567899999999999999999999999999999999987            333333433333332   4566666777


Q ss_pred             CChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc
Q psy9256         108 TQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG  187 (265)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g  187 (265)
                      +|+++++++                                                              ++++.+++|
T Consensus        84 ~~~~~v~~~--------------------------------------------------------------~~~~~~~~g  101 (278)
T 3sx2_A           84 RDRESLSAA--------------------------------------------------------------LQAGLDELG  101 (278)
T ss_dssp             TCHHHHHHH--------------------------------------------------------------HHHHHHHHC
T ss_pred             CCHHHHHHH--------------------------------------------------------------HHHHHHHcC
Confidence            776666666                                                              555555556


Q ss_pred             cccEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC----CCCCcccc
Q psy9256         188 CLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA----PYSGSYTD  263 (265)
Q Consensus       188 ~ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~----~~~~~Y~a  263 (265)
                      ++|+||||||+....+    +.++|++++++|+.|+++++++++|+|.+++.+|+||++||.++..+.    |+.+.|++
T Consensus       102 ~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~Y~a  177 (278)
T 3sx2_A          102 RLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVA  177 (278)
T ss_dssp             CCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCCCchHhHH
Confidence            6666666666543322    478999999999999999999999999887546999999999999877    77788999


Q ss_pred             CC
Q psy9256         264 HL  265 (265)
Q Consensus       264 sK  265 (265)
                      ||
T Consensus       178 sK  179 (278)
T 3sx2_A          178 AK  179 (278)
T ss_dssp             HH
T ss_pred             HH
Confidence            87

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=2.8e-29  Score=219.74  Aligned_cols=161  Identities=30%  Similarity=0.447  Sum_probs=123.3

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |..+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++......+.++.++++|++|+++++++    
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~----   76 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI----   76 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH----
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHH----
Confidence            3457899999999999999999999999999999999998777776665543233345677777888887777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||...
T Consensus        77 ----------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~~   98 (278)
T 1spx_A           77 ----------------------------------------------------------LSTTLGKFGKLDILVNNAGAAI   98 (278)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSCCCEEEECCC---
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      4444455555555555555544


Q ss_pred             ccccccc----chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc-ccCCCCCCccccCC
Q psy9256         201 RAAWEDI----ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG-IVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~----~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag-~~~~~~~~~Y~asK  265 (265)
                      ..++.+.    +.++|++.+++|+.|+++++++++|.|++++  |+||++||.++ ..+.|+.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~~Y~~sK  166 (278)
T 1spx_A           99 PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFPYYSIAK  166 (278)
T ss_dssp             ----------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCTTSHHHHHHH
T ss_pred             CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccCCCCccHHHHHH
Confidence            4455556    8899999999999999999999999998764  99999999999 88889999999987

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.96  E-value=1.6e-29  Score=221.69  Aligned_cols=165  Identities=27%  Similarity=0.342  Sum_probs=129.2

Q ss_pred             HHHHhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH
Q psy9256          33 FIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        33 ~~~~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (265)
                      ....+...+.+|+ |+++||||++|||+++|++|+++|++|++++|+++.++++.+++..   . .++.++.+|++|+++
T Consensus         9 ~~~~~~~~~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~---~-~~~~~~~~Dv~d~~~   83 (272)
T 2nwq_A            9 HSSGLVPRGSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA---K-TRVLPLTLDVRDRAA   83 (272)
T ss_dssp             ------------C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT---T-SCEEEEECCTTCHHH
T ss_pred             ccCcccccCCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc---C-CcEEEEEcCCCCHHH
Confidence            3444555667788 9999999999999999999999999999999987776665554421   1 356677777777777


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEE
Q psy9256         113 HRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDIL  192 (265)
Q Consensus       113 ~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldil  192 (265)
                      ++++                                                              ++++.+++|++|+|
T Consensus        84 v~~~--------------------------------------------------------------~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           84 MSAA--------------------------------------------------------------VDNLPEEFATLRGL  101 (272)
T ss_dssp             HHHH--------------------------------------------------------------HHTCCGGGSSCCEE
T ss_pred             HHHH--------------------------------------------------------------HHHHHHHhCCCCEE
Confidence            7666                                                              66666677777777


Q ss_pred             Eeccccccc-ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCc-eEEEEcccccccCCCCCCccccCC
Q psy9256         193 INNAGRSQR-AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGG-HLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       193 VnnAG~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g-~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++ .| +||++||.++..+.|+.+.|++||
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~~~~~~Y~asK  175 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPYPGSHVYGGTK  175 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCCCCCchHHHHH
Confidence            777777653 6788899999999999999999999999999998776 57 999999999999999999999987

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.96  E-value=3.9e-29  Score=216.62  Aligned_cols=155  Identities=28%  Similarity=0.416  Sum_probs=131.6

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+   .++.++++|++|+++++++         
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~---------   69 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG---GHAVAVKVDVSDRDQVFAA---------   69 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHH---------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHH---------
Confidence            6899999999999999999999999999999999877777766665432   4567777788877777777         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.+++|++|++|||||.....++.
T Consensus        70 -----------------------------------------------------~~~~~~~~g~id~lv~nAg~~~~~~~~   96 (256)
T 1geg_A           70 -----------------------------------------------------VEQARKTLGGFDVIVNNAGVAPSTPIE   96 (256)
T ss_dssp             -----------------------------------------------------HHHHHHHTTCCCEEEECCCCCCCBCGG
T ss_pred             -----------------------------------------------------HHHHHHHhCCCCEEEECCCCCCCCChh
Confidence                                                                 666666667777777777776667788


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++++++|+.++++++++++|.|.+++..|+||++||.++..+.|+.+.|++||
T Consensus        97 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  156 (256)
T 1geg_A           97 SITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSK  156 (256)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHH
Confidence            899999999999999999999999999998764358999999999999999999999987

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.96  E-value=3.5e-29  Score=217.11  Aligned_cols=155  Identities=26%  Similarity=0.384  Sum_probs=129.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc--HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN--LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +|+++||||++|||++++++|+++|++|++++|+++.  ++++.+++...   +.++.++++|++|+++++++       
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~-------   71 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA---DQKAVFVGLDVTDKANFDSA-------   71 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT---TCCEEEEECCTTCHHHHHHH-------
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHH-------
Confidence            7899999999999999999999999999999998876  66555554432   34677777888887777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.+++|++|++|||||.....+
T Consensus        72 -------------------------------------------------------~~~~~~~~g~iD~lv~nAg~~~~~~   96 (258)
T 3a28_C           72 -------------------------------------------------------IDEAAEKLGGFDVLVNNAGIAQIKP   96 (258)
T ss_dssp             -------------------------------------------------------HHHHHHHHTCCCEEEECCCCCCCCC
T ss_pred             -------------------------------------------------------HHHHHHHhCCCCEEEECCCCCCCCC
Confidence                                                                   6666666666777777777666667


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++++++|+.|+++++++++|.|.+++.+|+||++||.++..+.|+.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (258)
T 3a28_C           97 LLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTK  158 (258)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             hhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHH
Confidence            88899999999999999999999999999998776239999999999999999999999987

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.96  E-value=4.1e-29  Score=216.77  Aligned_cols=160  Identities=26%  Similarity=0.354  Sum_probs=132.0

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ++..++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++.+|++|+++++++   
T Consensus         8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~---   81 (260)
T 2zat_A            8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG---LSVTGTVCHVGKAEDRERL---   81 (260)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH---
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHH---
Confidence            3456889999999999999999999999999999999999877777666655432   4677777888887777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+.+|++|++|||||..
T Consensus        82 -----------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~~  102 (260)
T 2zat_A           82 -----------------------------------------------------------VAMAVNLHGGVDILVSNAAVN  102 (260)
T ss_dssp             -----------------------------------------------------------HHHHHHHHSCCCEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCCC
Confidence                                                                       555555566666666666654


Q ss_pred             c-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 Q-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      . ..++.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  168 (260)
T 2zat_A          103 PFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFPNLGPYNVSK  168 (260)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCCCCchhHHHHH
Confidence            3 35677889999999999999999999999999998765 79999999999999999999999987

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.96  E-value=3.1e-29  Score=218.79  Aligned_cols=156  Identities=24%  Similarity=0.334  Sum_probs=134.0

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+. ..++..+.+|++++++++++     
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~-----   79 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP-DAILQPVVADLGTEQGCQDV-----   79 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT-TCEEEEEECCTTSHHHHHHH-----
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEecCCCCHHHHHHH-----
Confidence            357899999999999999999999999999999999998888888777766532 24566777788777665444     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                                   .+++|++|++|||||....
T Consensus        80 -------------------------------------------------------------~~~~g~id~lv~nAg~~~~   98 (267)
T 3t4x_A           80 -------------------------------------------------------------IEKYPKVDILINNLGIFEP   98 (267)
T ss_dssp             -------------------------------------------------------------HHHCCCCSEEEECCCCCCC
T ss_pred             -------------------------------------------------------------HHhcCCCCEEEECCCCCCC
Confidence                                                                         2346778888888888777


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  161 (267)
T 3t4x_A           99 VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQEMAHYSATK  161 (267)
T ss_dssp             CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCCcchHHHHHH
Confidence            7888999999999999999999999999999998775 79999999999999999999999987

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.96  E-value=1.6e-29  Score=226.46  Aligned_cols=162  Identities=25%  Similarity=0.355  Sum_probs=134.6

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC----------CCcHHHHHHHHHHhCCCCCcEEEEeecCC
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS----------SSNLERVKNLCVQAGAHPQSIYTLTLDVT  108 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~  108 (265)
                      ..|..++||+++||||++|||+++|++|+++|++|++++|+          .+.++++.+++...+   .++.++.+|++
T Consensus        20 ~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~   96 (322)
T 3qlj_A           20 GSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG---GEAVADGSNVA   96 (322)
T ss_dssp             --CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT---CEEEEECCCTT
T ss_pred             chhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC---CcEEEEECCCC
Confidence            34677899999999999999999999999999999999987          566666666555443   46666777777


Q ss_pred             ChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccc
Q psy9256         109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGC  188 (265)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~  188 (265)
                      |+++++++                                                              ++++.+++|+
T Consensus        97 d~~~v~~~--------------------------------------------------------------~~~~~~~~g~  114 (322)
T 3qlj_A           97 DWDQAAGL--------------------------------------------------------------IQTAVETFGG  114 (322)
T ss_dssp             SHHHHHHH--------------------------------------------------------------HHHHHHHHSC
T ss_pred             CHHHHHHH--------------------------------------------------------------HHHHHHHcCC
Confidence            77776666                                                              6777777777


Q ss_pred             ccEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-----CceEEEEcccccccCCCCCCcccc
Q psy9256         189 LDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ-----GGHLVVTSSIAGIVGAPYSGSYTD  263 (265)
Q Consensus       189 ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-----~g~IV~isS~ag~~~~~~~~~Y~a  263 (265)
                      +|+||||||.....++.+.+.++|++++++|+.|++++++++.|.|.+++.     +|+||++||.++..+.++.+.|++
T Consensus       115 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a  194 (322)
T 3qlj_A          115 LDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSA  194 (322)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTTCHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCCCccHHH
Confidence            777777777777778889999999999999999999999999999976431     379999999999999999999999


Q ss_pred             CC
Q psy9256         264 HL  265 (265)
Q Consensus       264 sK  265 (265)
                      ||
T Consensus       195 sK  196 (322)
T 3qlj_A          195 AK  196 (322)
T ss_dssp             HH
T ss_pred             HH
Confidence            87

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=3.8e-29  Score=216.80  Aligned_cols=153  Identities=24%  Similarity=0.376  Sum_probs=128.4

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |..|+||+++||||++|||++++++|+++|++|++++|+++. +++.+.+   .    + .++++|++|+++++++    
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~---~----~-~~~~~D~~~~~~~~~~----   67 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI---G----G-AFFQVDLEDERERVRF----   67 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH---T----C-EEEECCTTCHHHHHHH----
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh---h----C-CEEEeeCCCHHHHHHH----
Confidence            356789999999999999999999999999999999998876 5444332   1    3 5677888887777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||...
T Consensus        68 ----------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~~~   89 (256)
T 2d1y_A           68 ----------------------------------------------------------VEEAAYALGRVDVLVNNAAIAA   89 (256)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSCCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666666667777777777666


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus        90 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  153 (256)
T 2d1y_A           90 PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASK  153 (256)
T ss_dssp             CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCChhHHHHH
Confidence            67788899999999999999999999999999998765 69999999999999999999999987

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.7e-29  Score=220.84  Aligned_cols=155  Identities=28%  Similarity=0.335  Sum_probs=128.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEe-cCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++||+++||||++|||+++|++|+++|++|++++ |+.+..+++.+++...+   .++.++++|++|+++++++     
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~-----   95 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG---GKALTAQADVSDPAAVRRL-----   95 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH-----
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHH-----
Confidence            46799999999999999999999999999999985 45556666666655543   4677777788777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||+...
T Consensus        96 ---------------------------------------------------------~~~~~~~~g~iD~lvnnAG~~~~  118 (267)
T 3u5t_A           96 ---------------------------------------------------------FATAEEAFGGVDVLVNNAGIMPL  118 (267)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCEEEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     66666677777777777777777


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++++++|+.|+++++++++|.|.+   +|+||++||.++..+.|+.+.|++||
T Consensus       119 ~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK  179 (267)
T 3u5t_A          119 TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVGLLHPSYGIYAAAK  179 (267)
T ss_dssp             CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhccCCCCchHHHHHH
Confidence            78889999999999999999999999999999954   48999999999999999999999987

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.96  E-value=3.4e-29  Score=218.88  Aligned_cols=160  Identities=25%  Similarity=0.260  Sum_probs=133.6

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +..+++||+++||||++|||+++|++|+++|++|++++|+.+ ..+++.+++...   +.++.++++|++|++++.++  
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~--   97 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK---GYKAAVIKFDAASESDFIEA--   97 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHH--
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCceEEEECCCCCHHHHHHH--
Confidence            345688999999999999999999999999999999999544 444455544443   25677777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+.++++|++|||||.
T Consensus        98 ------------------------------------------------------------~~~~~~~~g~id~li~nAg~  117 (271)
T 4iin_A           98 ------------------------------------------------------------IQTIVQSDGGLSYLVNNAGV  117 (271)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSSCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHhcCCCCEEEECCCc
Confidence                                                                        66666667777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++.+++|+.|++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  183 (271)
T 4iin_A          118 VRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGNMGQTNYSASK  183 (271)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCCCCchHhHHHH
Confidence            7777788899999999999999999999999999998876 79999999999999999999999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.96  E-value=6.9e-29  Score=217.62  Aligned_cols=157  Identities=24%  Similarity=0.327  Sum_probs=129.8

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+ +..++..+++...   +.++.++++|++|+++++++    
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~----   97 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG---GGSAEAVVADLADLEGAANV----   97 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT---TCEEEEEECCTTCHHHHHHH----
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHH----
Confidence            357899999999999999999999999999999999965 4455555444332   35677777888877777666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                .+. .+++|++|+||||||...
T Consensus        98 ----------------------------------------------------------~~~-~~~~g~iD~lv~nAg~~~  118 (273)
T 3uf0_A           98 ----------------------------------------------------------AEE-LAATRRVDVLVNNAGIIA  118 (273)
T ss_dssp             ----------------------------------------------------------HHH-HHHHSCCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHH-HHhcCCCcEEEECCCCCC
Confidence                                                                      222 233467777777777777


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       119 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asK  182 (273)
T 3uf0_A          119 RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGRNVAAYAASK  182 (273)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCCCChhHHHHH
Confidence            77888999999999999999999999999999998876 79999999999999999999999987

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.96  E-value=1e-28  Score=213.20  Aligned_cols=155  Identities=28%  Similarity=0.368  Sum_probs=119.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.++.+|++|+++++++++.  
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~--   79 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG---GTAISVAVDVSDPESAKAMADR--   79 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHHH--
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHH--
Confidence            45789999999999999999999999999999999999888888777776543   5777888888888888888444  


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc---
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR---  198 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~---  198 (265)
                                                                                  +.++++++|++|||||.   
T Consensus        80 ------------------------------------------------------------~~~~~g~id~li~~Ag~~~~   99 (253)
T 3qiv_A           80 ------------------------------------------------------------TLAEFGGIDYLVNNAAIFGG   99 (253)
T ss_dssp             ------------------------------------------------------------HHHHHSCCCEEEECCCCCCG
T ss_pred             ------------------------------------------------------------HHHHcCCCCEEEECCCcCCC
Confidence                                                                        44445555555555554   


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.++++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++.   ++.+.|++||
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~---~~~~~Y~asK  162 (253)
T 3qiv_A          100 MKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW---LYSNYYGLAK  162 (253)
T ss_dssp             GGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------CCH
T ss_pred             CCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc---CCCchhHHHH
Confidence            3345677889999999999999999999999999998876 7999999999876   4567799987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.96  E-value=3.6e-29  Score=219.62  Aligned_cols=159  Identities=25%  Similarity=0.287  Sum_probs=132.0

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ++.+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++..   .+ ++.++.+|++|+++++++   
T Consensus        23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~---~~-~~~~~~~Dv~d~~~v~~~---   95 (276)
T 2b4q_A           23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA---YG-DCQAIPADLSSEAGARRL---   95 (276)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT---SS-CEEECCCCTTSHHHHHHH---
T ss_pred             cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cC-ceEEEEeeCCCHHHHHHH---
Confidence            34568899999999999999999999999999999999987766655554422   12 566666777777666666   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+.+|++|++|||||..
T Consensus        96 -----------------------------------------------------------~~~~~~~~g~iD~lvnnAg~~  116 (276)
T 2b4q_A           96 -----------------------------------------------------------AQALGELSARLDILVNNAGTS  116 (276)
T ss_dssp             -----------------------------------------------------------HHHHHHHCSCCSEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHhcCCCCEEEECCCCC
Confidence                                                                       666666777777777777776


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCC----ceEEEEcccccccCCCCCC-ccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG----GHLVVTSSIAGIVGAPYSG-SYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~----g~IV~isS~ag~~~~~~~~-~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.++++++++++|.|++++ .    |+||++||.++..+.++.. .|++||
T Consensus       117 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK  186 (276)
T 2b4q_A          117 WGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGISAMGEQAYAYGPSK  186 (276)
T ss_dssp             CCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTCCCCCSCTTHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcCCCCCCccccHHHH
Confidence            667788899999999999999999999999999998765 4    8999999999999988888 999987

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.96  E-value=6.9e-29  Score=214.91  Aligned_cols=155  Identities=26%  Similarity=0.370  Sum_probs=128.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|+||+++||||++|||++++++|+++|++|++++|+++  ++..+++...   +.++.++.+|++|+++++++      
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~------   69 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH---GVKAVHHPADLSDVAQIEAL------   69 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT---SCCEEEECCCTTSHHHHHHH------
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc---CCceEEEeCCCCCHHHHHHH------
Confidence            367999999999999999999999999999999999876  4444444322   24566677777777777766      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        70 --------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~~~~   93 (255)
T 2q2v_A           70 --------------------------------------------------------FALAEREFGGVDILVNNAGIQHVA   93 (255)
T ss_dssp             --------------------------------------------------------HHHHHHHHSSCSEEEECCCCCCCB
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666666667777777777776667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.|++++++.++|.|++++ .|+||++||.++..+.|+...|++||
T Consensus        94 ~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  155 (255)
T 2q2v_A           94 PVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAK  155 (255)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCCCchhHHHHH
Confidence            788889999999999999999999999999998765 69999999999999999999999987

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.96  E-value=5.3e-29  Score=215.53  Aligned_cols=153  Identities=22%  Similarity=0.247  Sum_probs=129.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|+||+++||||++|||++++++|+++|++|++++|+++.++++.+++      +.++.++++|++|+++++++      
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~------   70 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL------GERSMFVRHDVSSEADWTLV------   70 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH------CTTEEEECCCTTCHHHHHHH------
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCceEEEEccCCCHHHHHHH------
Confidence            578999999999999999999999999999999999877666555443      24677777888887777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        71 --------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~~~~   94 (253)
T 1hxh_A           71 --------------------------------------------------------MAAVQRRLGTLNVLVNNAGILLPG   94 (253)
T ss_dssp             --------------------------------------------------------HHHHHHHHCSCCEEEECCCCCCCB
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666666666677777777766666


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.+++++++.++|.|++++  |+||++||.++..+.++.+.|++||
T Consensus        95 ~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~~sK  155 (253)
T 1hxh_A           95 DMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIEQYAGYSASK  155 (253)
T ss_dssp             CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCCCCCccHHHHH
Confidence            788899999999999999999999999999998764  9999999999999999999999987

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.96  E-value=8.2e-29  Score=216.90  Aligned_cols=158  Identities=23%  Similarity=0.283  Sum_probs=130.6

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ...+++||+++||||++|||+++|++|+++|++|++++++. +.++++.+++...+   .++.++.+|++|+++++++  
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~--   99 (271)
T 3v2g_A           25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG---GRAVAIRADNRDAEAIEQA--   99 (271)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH--
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHH--
Confidence            34578999999999999999999999999999999997664 45555655555443   5677777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|+||||||.
T Consensus       100 ------------------------------------------------------------~~~~~~~~g~iD~lvnnAg~  119 (271)
T 3v2g_A          100 ------------------------------------------------------------IRETVEALGGLDILVNSAGI  119 (271)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCcEEEECCCC
Confidence                                                                        66666677777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC-CCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG-APYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~-~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++.+++|+.|+++++++++|.|.+   +|+||++||..+..+ .|+.+.|++||
T Consensus       120 ~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~Y~asK  184 (271)
T 3v2g_A          120 WHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAELVPWPGISLYSASK  184 (271)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGTCCCSTTCHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhccCCCCCchHHHHHH
Confidence            77778889999999999999999999999999999954   589999999877765 78899999987

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.96  E-value=1.2e-28  Score=213.95  Aligned_cols=158  Identities=22%  Similarity=0.224  Sum_probs=133.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.... .+.++.++.+|++|+++++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~------   76 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV-SGAQVDIVAGDIREPGDIDRL------   76 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-TTCCEEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCCeEEEEEccCCCHHHHHHH------
Confidence            4789999999999999999999999999999999999877777666654321 112566677777777777666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++| +|++|||||.....
T Consensus        77 --------------------------------------------------------~~~~~~~~g-id~lv~~Ag~~~~~   99 (260)
T 2z1n_A           77 --------------------------------------------------------FEKARDLGG-ADILVYSTGGPRPG   99 (260)
T ss_dssp             --------------------------------------------------------HHHHHHTTC-CSEEEECCCCCCCB
T ss_pred             --------------------------------------------------------HHHHHHhcC-CCEEEECCCCCCCC
Confidence                                                                    777777777 88888888877667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.|++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       100 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  161 (260)
T 2z1n_A          100 RFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQDLALSNIMR  161 (260)
T ss_dssp             CGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHT
T ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCchhHHHH
Confidence            788899999999999999999999999999998775 79999999999999999999999998

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.96  E-value=6e-29  Score=219.11  Aligned_cols=167  Identities=17%  Similarity=0.149  Sum_probs=124.0

Q ss_pred             HHhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCC----
Q psy9256          35 EKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQ----  109 (265)
Q Consensus        35 ~~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----  109 (265)
                      ++...++.+|+||+++||||++|||+++|++|+++|++|++++|+. +.++++.+++....  +.++.++++|++|    
T Consensus        12 ~~~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~~   89 (288)
T 2x9g_A           12 SGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER--SNTAVVCQADLTNSNVL   89 (288)
T ss_dssp             ----------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSCSTTH
T ss_pred             cccCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc--CCceEEEEeecCCccCC
Confidence            4445666778999999999999999999999999999999999998 77777766665222  3567888888888    


Q ss_pred             hHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccc
Q psy9256         110 TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  189 (265)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~l  189 (265)
                      +++++++++.+.+.+|++|+||||||                                                      
T Consensus        90 ~~~v~~~~~~~~~~~g~iD~lvnnAG------------------------------------------------------  115 (288)
T 2x9g_A           90 PASCEEIINSCFRAFGRCDVLVNNAS------------------------------------------------------  115 (288)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCC------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCC------------------------------------------------------
Confidence            78888885555555555555555555                                                      


Q ss_pred             cEEEecccccccccc-----cc-----cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-----CceEEEEcccccccC
Q psy9256         190 DILINNAGRSQRAAW-----ED-----IELEVDRELFELNVFSVLSLSRIATSYFLAREQ-----GGHLVVTSSIAGIVG  254 (265)
Q Consensus       190 dilVnnAG~~~~~~~-----~~-----~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-----~g~IV~isS~ag~~~  254 (265)
                              .....++     .+     .+.++|++.+++|+.+++++++.++|.|.+++.     .|+||++||.++..+
T Consensus       116 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  187 (288)
T 2x9g_A          116 --------AFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP  187 (288)
T ss_dssp             --------CCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSC
T ss_pred             --------CCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCC
Confidence                    4333333     44     788999999999999999999999999986531     589999999999999


Q ss_pred             CCCCCccccCC
Q psy9256         255 APYSGSYTDHL  265 (265)
Q Consensus       255 ~~~~~~Y~asK  265 (265)
                      .++.+.|++||
T Consensus       188 ~~~~~~Y~asK  198 (288)
T 2x9g_A          188 CMAFSLYNMGK  198 (288)
T ss_dssp             CTTCHHHHHHH
T ss_pred             CCCCchHHHHH
Confidence            99999999987

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.96  E-value=3.4e-29  Score=218.63  Aligned_cols=161  Identities=20%  Similarity=0.314  Sum_probs=128.4

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      .+...+++|+++||||++|||+++|++|+++|++|++++++ .+..++..+++..   .+.++.++.+|++|+++++++ 
T Consensus        18 ~p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~-   93 (269)
T 3gk3_A           18 GPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD---AGRDFKAYAVDVADFESCERC-   93 (269)
T ss_dssp             ------CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT---TTCCCEEEECCTTCHHHHHHH-
T ss_pred             CchhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHH-
Confidence            34445789999999999999999999999999999999854 3333333333322   235666777777777777766 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.+++|++|++|||||
T Consensus        94 -------------------------------------------------------------~~~~~~~~g~id~li~nAg  112 (269)
T 3gk3_A           94 -------------------------------------------------------------AEKVLADFGKVDVLINNAG  112 (269)
T ss_dssp             -------------------------------------------------------------HHHHHHHHSCCSEEEECCC
T ss_pred             -------------------------------------------------------------HHHHHHHcCCCCEEEECCC
Confidence                                                                         6666667777777777777


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .....++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  179 (269)
T 3gk3_A          113 ITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAFGQANYASAK  179 (269)
T ss_dssp             CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred             cCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCCCcchHHHHH
Confidence            77777888899999999999999999999999999998876 79999999999999999999999987

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.96  E-value=8.1e-29  Score=215.44  Aligned_cols=162  Identities=22%  Similarity=0.250  Sum_probs=133.1

Q ss_pred             hhccccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcH-HHHHHHHHHhCCCCCcEEEEeecCCChHHHHH
Q psy9256          39 KRLNYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRR  115 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (265)
                      +++.+++||+++||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++.+..  +.++.++++|++|++++++
T Consensus        13 ~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~   90 (267)
T 3gdg_A           13 LDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY--GIKAKAYKCQVDSYESCEK   90 (267)
T ss_dssp             HHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH--CCCEECCBCCTTCHHHHHH
T ss_pred             ccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc--CCceeEEecCCCCHHHHHH
Confidence            34567899999999999  9999999999999999999999887665 45544443322  2456666666666666666


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEec
Q psy9256         116 CFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       116 ~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn  195 (265)
                      +                                                              ++++.+++|++|++|||
T Consensus        91 ~--------------------------------------------------------------~~~~~~~~g~id~li~n  108 (267)
T 3gdg_A           91 L--------------------------------------------------------------VKDVVADFGQIDAFIAN  108 (267)
T ss_dssp             H--------------------------------------------------------------HHHHHHHTSCCSEEEEC
T ss_pred             H--------------------------------------------------------------HHHHHHHcCCCCEEEEC
Confidence            6                                                              77777777778888888


Q ss_pred             ccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC--CCCCccccCC
Q psy9256         196 AGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA--PYSGSYTDHL  265 (265)
Q Consensus       196 AG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~--~~~~~Y~asK  265 (265)
                      ||+....++.+.+.++|++.+++|+.|++++++.++|.|++++ .|+||++||.++..+.  ++.+.|++||
T Consensus       109 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sK  179 (267)
T 3gdg_A          109 AGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFPQEQTSYNVAK  179 (267)
T ss_dssp             CCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSSSCCHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCCCCCCcchHHH
Confidence            8877777788899999999999999999999999999998876 7999999999998875  5788999987

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.96  E-value=5.1e-29  Score=212.78  Aligned_cols=155  Identities=31%  Similarity=0.420  Sum_probs=131.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++....  +.++.++++|++|+++++++        
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~--------   70 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ--GVEVFYHHLDVSKAESVEEF--------   70 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTCHHHHHHH--------
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCeEEEEEeccCCHHHHHHH--------
Confidence            37899999999999999999999999999999999888888777665322  25677777888887777777        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++++.+++|++|++|||||.....++
T Consensus        71 ------------------------------------------------------~~~~~~~~g~id~li~~Ag~~~~~~~   96 (235)
T 3l77_A           71 ------------------------------------------------------SKKVLERFGDVDVVVANAGLGYFKRL   96 (235)
T ss_dssp             ------------------------------------------------------CC-HHHHHSSCSEEEECCCCCCCCCT
T ss_pred             ------------------------------------------------------HHHHHHhcCCCCEEEECCccccccCc
Confidence                                                                  66666667777777777777777788


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.+.++|++.+++|+.|+++++++++|.|.++  +|++|+++|..+..+.|+.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~~~~~~Y~~sK  155 (235)
T 3l77_A           97 EELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSARLIPYGGGYVSTK  155 (235)
T ss_dssp             TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSSCCTTCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhcccCCCcchHHHHH
Confidence            899999999999999999999999999999543  58999999999999999999999987

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.96  E-value=9e-29  Score=222.15  Aligned_cols=157  Identities=31%  Similarity=0.397  Sum_probs=125.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-----CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-----SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      +|++|+++||||++|||+++|++|+++|++|++++|+.     +.++++.+.+...   +.++.++.+|++|+++++++ 
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~---~~~~~~~~~Dvtd~~~v~~~-   77 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN---DVDLRTLELDVQSQVSVDRA-   77 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH---TCCEEEEECCTTCHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc---CCcEEEEEeecCCHHHHHHH-
Confidence            36789999999999999999999999999999988863     2333333333332   24566666676666666666 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.+++|++|++|||||
T Consensus        78 -------------------------------------------------------------~~~~~~~~g~iD~lVnnAG   96 (324)
T 3u9l_A           78 -------------------------------------------------------------IDQIIGEDGRIDVLIHNAG   96 (324)
T ss_dssp             -------------------------------------------------------------HHHHHHHHSCCSEEEECCC
T ss_pred             -------------------------------------------------------------HHHHHHHcCCCCEEEECCC
Confidence                                                                         7777777777888888888


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-CCCCCCccccCC
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-GAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-~~~~~~~Y~asK  265 (265)
                      +...+++++.++++|++++++|+.|+++++++++|+|++++ .|+||++||.++.. +.|+.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~~~~~~Y~asK  164 (324)
T 3u9l_A           97 HMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPPYLAPYFAAK  164 (324)
T ss_dssp             CCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCCSSCHHHHHHH
T ss_pred             cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCCCcchhHHHHH
Confidence            77778889999999999999999999999999999998876 79999999999985 456778899987

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=7.1e-29  Score=214.97  Aligned_cols=150  Identities=26%  Similarity=0.366  Sum_probs=126.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ||+++||||++|||+++|++|+++|  +.|++++|+++.++++.+++      +.++.++++|++|+++++++       
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~-------   68 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY------GDRFFYVVGDITEDSVLKQL-------   68 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH------GGGEEEEESCTTSHHHHHHH-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh------CCceEEEECCCCCHHHHHHH-------
Confidence            7999999999999999999999985  78999999877766655543      24677777888887777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-cc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RA  202 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~~  202 (265)
                                                                             ++++.+++|++|+||||||... ..
T Consensus        69 -------------------------------------------------------~~~~~~~~g~id~lvnnAg~~~~~~   93 (254)
T 3kzv_A           69 -------------------------------------------------------VNAAVKGHGKIDSLVANAGVLEPVQ   93 (254)
T ss_dssp             -------------------------------------------------------HHHHHHHHSCCCEEEEECCCCCCCT
T ss_pred             -------------------------------------------------------HHHHHHhcCCccEEEECCcccCCCC
Confidence                                                                   6666666666677777777643 36


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.|+++++++++|+|++++  |+||++||.++..+.++.+.|++||
T Consensus        94 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~~~~~Y~asK  154 (254)
T 3kzv_A           94 NVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFSSWGAYGSSK  154 (254)
T ss_dssp             TTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSCCSHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCCCcchHHHHH
Confidence            788899999999999999999999999999998764  9999999999999999999999987

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.96  E-value=7.4e-29  Score=215.07  Aligned_cols=161  Identities=26%  Similarity=0.263  Sum_probs=132.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHH---cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSK---CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +.|++|+++||||++|||+++|++|++   +|++|++++|+++.++++.+++.... .+.++.++++|++|+++++++  
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~--   78 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-PDLKVVLAAADLGTEAGVQRL--   78 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC-TTSEEEEEECCTTSHHHHHHH--
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC-CCCeEEEEecCCCCHHHHHHH--
Confidence            457899999999999999999999999   89999999999888877776665432 124677777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHh--hccccc--EEEe
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQ--QFGCLD--ILIN  194 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~--~~g~ld--ilVn  194 (265)
                                                                                  ++++.+  .+|++|  +|||
T Consensus        79 ------------------------------------------------------------~~~~~~~~~~g~~d~~~lvn   98 (259)
T 1oaa_A           79 ------------------------------------------------------------LSAVRELPRPEGLQRLLLIN   98 (259)
T ss_dssp             ------------------------------------------------------------HHHHHHSCCCTTCCEEEEEE
T ss_pred             ------------------------------------------------------------HHHHHhccccccCCccEEEE
Confidence                                                                        666655  456666  7777


Q ss_pred             ccccccc--ccccc-cchHHHHhhhhhhhhHHHHHHHHHHHHhhhh-cCCceEEEEcccccccCCCCCCccccCC
Q psy9256         195 NAGRSQR--AAWED-IELEVDRELFELNVFSVLSLSRIATSYFLAR-EQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       195 nAG~~~~--~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~-~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |||....  .++.+ .+.++|++++++|+.|+++++++++|.|+++ +..|+||++||.++..+.++.+.|++||
T Consensus        99 nAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  173 (259)
T 1oaa_A           99 NAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGK  173 (259)
T ss_dssp             CCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCCccHHHHHH
Confidence            7776533  45677 6889999999999999999999999999876 1268999999999999999999999987

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.96  E-value=4.5e-29  Score=217.99  Aligned_cols=150  Identities=27%  Similarity=0.342  Sum_probs=123.9

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +.|.+++||+++||||++|||+++|++|+++|++|++++|+.+.+++              ...+++|+++.++++++  
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~--------------~~~~~~Dv~~~~~~~~~--   84 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA--------------DLHLPGDLREAAYADGL--   84 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC--------------SEECCCCTTSHHHHHHH--
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh--------------hhccCcCCCCHHHHHHH--
Confidence            45678999999999999999999999999999999999997654321              12235566665555555  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|++|||||.
T Consensus        85 ------------------------------------------------------------~~~~~~~~g~iD~lvnnAg~  104 (266)
T 3uxy_A           85 ------------------------------------------------------------PGAVAAGLGRLDIVVNNAGV  104 (266)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHhcCCCCEEEECCCC
Confidence                                                                        77777777778888888887


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++.+++|+.|+++++++++|+|++++ .|+||++||.++..+.++.+.|++||
T Consensus       105 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  170 (266)
T 3uxy_A          105 ISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGPGHALYCLTK  170 (266)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCTTBHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCChHHHHHH
Confidence            7778888999999999999999999999999999998876 79999999999999999999999987

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.96  E-value=1.7e-28  Score=217.44  Aligned_cols=156  Identities=18%  Similarity=0.217  Sum_probs=127.7

Q ss_pred             ccccCCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        41 ~~~l~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +..++||+++||||++  |||+++|++|+++|++|++++|+++..+.+.+...+.+    +..++++|++|+++++++  
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~--   98 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG----VKLTVPCDVSDAESVDNM--   98 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT----CCEEEECCTTCHHHHHHH--
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC----CeEEEEcCCCCHHHHHHH--
Confidence            4568899999999986  99999999999999999999999776666655554443    356777888888777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|+||||||+
T Consensus        99 ------------------------------------------------------------~~~~~~~~g~iD~lVnnAG~  118 (296)
T 3k31_A           99 ------------------------------------------------------------FKVLAEEWGSLDFVVHAVAF  118 (296)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCSEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCc
Confidence                                                                        55555555555555555555


Q ss_pred             ccc----ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQR----AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...    .++.+.+.++|++.+++|+.++++++++++|.|.+   +|+||++||.++..+.++++.|++||
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~~~~~~~~~~~Y~asK  186 (296)
T 3k31_A          119 SDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYGAEKVVPHYNVMGVCK  186 (296)
T ss_dssp             CCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCTTTTHHHHHH
T ss_pred             CCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehhhccCCCCchhhHHHH
Confidence            443    56788999999999999999999999999999965   58999999999999999999999987

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.96  E-value=1.2e-28  Score=214.80  Aligned_cols=149  Identities=23%  Similarity=0.385  Sum_probs=128.0

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+.+|++|+++||||++|||++++++|+++|++|++++|+++.              +.++.++++|++|+++++++   
T Consensus         2 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~~Dl~~~~~v~~~---   64 (264)
T 2dtx_A            2 GFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------------EAKYDHIECDVTNPDQVKAS---   64 (264)
T ss_dssp             CCGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------------SCSSEEEECCTTCHHHHHHH---
T ss_pred             CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------------CCceEEEEecCCCHHHHHHH---
Confidence            3456889999999999999999999999999999999998754              13566777888888777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|++|||||..
T Consensus        65 -----------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~~   85 (264)
T 2dtx_A           65 -----------------------------------------------------------IDHIFKEYGSISVLVNNAGIE   85 (264)
T ss_dssp             -----------------------------------------------------------HHHHHHHHSCCCEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCCC
Confidence                                                                       666666666777777777766


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        86 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (264)
T 2dtx_A           86 SYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTSK  150 (264)
T ss_dssp             CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccCCCCchhHHHHH
Confidence            667788899999999999999999999999999998765 69999999999999999999999987

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.96  E-value=1e-28  Score=214.82  Aligned_cols=154  Identities=24%  Similarity=0.332  Sum_probs=129.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||++++++|+++|++|++++|+++.++++.+++   .   .++.++.+|++|+++++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~v~~~------   71 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---A---DAARYVHLDVTQPAQWKAA------   71 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---G---GGEEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---h---cCceEEEecCCCHHHHHHH------
Confidence            478999999999999999999999999999999999876665544432   1   2366677777777777766      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        72 --------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~~~~~   95 (260)
T 1nff_A           72 --------------------------------------------------------VDTAVTAFGGLHVLVNNAGILNIG   95 (260)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCB
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666666667777777777776667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.|++++++.++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (260)
T 1nff_A           96 TIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATK  157 (260)
T ss_dssp             CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCCCchhHHHHH
Confidence            788899999999999999999999999999998775 79999999999999999999999987

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.96  E-value=2.1e-28  Score=216.66  Aligned_cols=159  Identities=18%  Similarity=0.227  Sum_probs=125.2

Q ss_pred             hhhccccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHH
Q psy9256          38 NKRLNYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRR  115 (265)
Q Consensus        38 ~~~~~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (265)
                      ..+|..++||+++||||+  +|||+++|++|+++|++|++++|+++..+.+.+...+.    .++.++.+|++|++++++
T Consensus        23 ~~~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~   98 (293)
T 3grk_A           23 TAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL----GAFVAGHCDVADAASIDA   98 (293)
T ss_dssp             ----CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH----TCEEEEECCTTCHHHHHH
T ss_pred             CcccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc----CCceEEECCCCCHHHHHH
Confidence            345667899999999999  56999999999999999999999854444444433333    246677777777777777


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEec
Q psy9256         116 CFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       116 ~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn  195 (265)
                      +                                                              ++++.+++|++|+||||
T Consensus        99 ~--------------------------------------------------------------~~~~~~~~g~iD~lVnn  116 (293)
T 3grk_A           99 V--------------------------------------------------------------FETLEKKWGKLDFLVHA  116 (293)
T ss_dssp             H--------------------------------------------------------------HHHHHHHTSCCSEEEEC
T ss_pred             H--------------------------------------------------------------HHHHHHhcCCCCEEEEC
Confidence            7                                                              55555555556666666


Q ss_pred             ccccc----cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         196 AGRSQ----RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       196 AG~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ||+..    ..++.+.+.++|++.+++|+.++++++++++|.|.+   +|+||++||.++..+.++++.|++||
T Consensus       117 AG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~Y~asK  187 (293)
T 3grk_A          117 IGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGAEKVMPNYNVMGVAK  187 (293)
T ss_dssp             CCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhhccCCCchHHHHHHH
Confidence            66553    356788999999999999999999999999999964   58999999999999999999999987

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.96  E-value=8e-29  Score=218.93  Aligned_cols=181  Identities=21%  Similarity=0.248  Sum_probs=133.4

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh-HHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT-KYHRRCFD  118 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~  118 (265)
                      ++..+++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+  +.++.++.+|++|+ ++++++++
T Consensus         6 ~~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~v~~~~~   83 (311)
T 3o26_A            6 PNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN--HENVVFHQLDVTDPIATMSSLAD   83 (311)
T ss_dssp             ------CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCSEEEEECCTTSCHHHHHHHHH
T ss_pred             CCccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCceEEEEccCCCcHHHHHHHHH
Confidence            3456789999999999999999999999999999999999988888777776543  35789999999998 99999999


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                      .+.+.+|++|+||||||+.........                             ....+..+...   .+.++.--..
T Consensus        84 ~~~~~~g~iD~lv~nAg~~~~~~~~~~-----------------------------~~~~~~~~~~~---~~~~~~~~~~  131 (311)
T 3o26_A           84 FIKTHFGKLDILVNNAGVAGFSVDADR-----------------------------FKAMISDIGED---SEELVKIYEK  131 (311)
T ss_dssp             HHHHHHSSCCEEEECCCCCSCEECHHH-----------------------------HHHHHHHHCSS---TTHHHHHTTS
T ss_pred             HHHHhCCCCCEEEECCcccccccccch-----------------------------hhhcccccccc---hhhcchhhcc
Confidence            999999999999999998654321100                             00001111000   0000000001


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA  255 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~  255 (265)
                      ....++.+.+.++|++.+++|+.|++++++.++|.|++++ .|+||++||.++..+.
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~~IV~isS~~~~~~~  187 (311)
T 3o26_A          132 PEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD-SPRIVNVSSSTGSLKY  187 (311)
T ss_dssp             HHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGSGGG
T ss_pred             cchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCC-CCeEEEEecCCccccc
Confidence            1224566788999999999999999999999999998765 7999999999987653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.96  E-value=1.4e-28  Score=213.18  Aligned_cols=156  Identities=27%  Similarity=0.331  Sum_probs=130.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++      +.++.++.+|++|+++++++     
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~-----   73 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI------GDAALAVAADISKEADVDAA-----   73 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTTSHHHHHHH-----
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCceEEEEecCCCHHHHHHH-----
Confidence            4678999999999999999999999999999999999987777665543      24677778888888777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-  200 (265)
                                                                               ++++.++++++|++|||||... 
T Consensus        74 ---------------------------------------------------------~~~~~~~~g~id~li~~Ag~~~~   96 (261)
T 3n74_A           74 ---------------------------------------------------------VEAALSKFGKVDILVNNAGIGHK   96 (261)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCCEEEECCccCCC
Confidence                                                                     5555556666666666666654 


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc---CCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE---QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~---~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++++.+.++|++.+++|+.+++++++.++|.|.+++   ..|+||++||.++..+.|+.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK  164 (261)
T 3n74_A           97 PQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATK  164 (261)
T ss_dssp             SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHH
Confidence            46677889999999999999999999999999998763   147899999999999999999999987

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.96  E-value=1.2e-28  Score=213.00  Aligned_cols=150  Identities=23%  Similarity=0.356  Sum_probs=126.9

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||+++|++|+++|++|++++|+++.++++.+++   .   .++.++++|++|+++++++          
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~v~~~----------   64 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---G---DNLYIAQLDVRNRAAIEEM----------   64 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C---TTEEEEECCTTCHHHHHHH----------
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---c---CceEEEEcCCCCHHHHHHH----------
Confidence            68999999999999999999999999999999877666554443   2   3567777788777777777          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-ccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RAAWE  205 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~~~~~  205 (265)
                                                                          ++++.+++|++|+||||||+.. ..++.
T Consensus        65 ----------------------------------------------------~~~~~~~~g~iD~lvnnAg~~~~~~~~~   92 (248)
T 3asu_A           65 ----------------------------------------------------LASLPAEWCNIDILVNNAGLALGMEPAH   92 (248)
T ss_dssp             ----------------------------------------------------HHTSCTTTCCCCEEEECCCCCCCCSCGG
T ss_pred             ----------------------------------------------------HHHHHHhCCCCCEEEECCCcCCCCCchh
Confidence                                                                6666666777777777777653 46778


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        93 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  151 (248)
T 3asu_A           93 KASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATK  151 (248)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCCCCCchHHHHH
Confidence            899999999999999999999999999998765 79999999999999999999999987

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=1.2e-28  Score=212.39  Aligned_cols=151  Identities=23%  Similarity=0.326  Sum_probs=125.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||++++++|+++|++|++++|+++.++++.+++        .+.++.+|++|+++++++      
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~~~~~------   67 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--------GAHPVVMDVADPASVERG------   67 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------TCEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------CCEEEEecCCCHHHHHHH------
Confidence            367999999999999999999999999999999999876655443321        155667777777777766      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        68 --------------------------------------------------------~~~~~~~~g~id~lvn~Ag~~~~~   91 (245)
T 1uls_A           68 --------------------------------------------------------FAEALAHLGRLDGVVHYAGITRDN   91 (245)
T ss_dssp             --------------------------------------------------------HHHHHHHHSSCCEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666666667777777777776667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.+ ..+.++...|++||
T Consensus        92 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~~~~~~~Y~asK  152 (245)
T 1uls_A           92 FHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGNLGQANYAASM  152 (245)
T ss_dssp             CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCCTTCHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcCCCCchhHHHHH
Confidence            788899999999999999999999999999998765 79999999999 88889999999987

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.96  E-value=1e-28  Score=218.61  Aligned_cols=157  Identities=24%  Similarity=0.373  Sum_probs=127.5

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC--CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS--SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+.  +..+++.+.+.+.+   .++.++.+|++|+++++++  
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~--  118 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG---RKAVLLPGDLSDESFARSL--  118 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT---CCEEECCCCTTSHHHHHHH--
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC---CcEEEEEecCCCHHHHHHH--
Confidence            4568899999999999999999999999999999999873  33444444444432   4666677777777777766  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|++|||||.
T Consensus       119 ------------------------------------------------------------~~~~~~~~g~iD~lv~nAg~  138 (294)
T 3r3s_A          119 ------------------------------------------------------------VHKAREALGGLDILALVAGK  138 (294)
T ss_dssp             ------------------------------------------------------------HHHHHHHHTCCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCC
Confidence                                                                        66666666666667777666


Q ss_pred             cc-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQ-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .. ..++.+.+.++|++.+++|+.|+++++++++|.|.+   +|+||++||.++..+.++.+.|++||
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~Y~asK  203 (294)
T 3r3s_A          139 QTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAYQPSPHLLDYAATK  203 (294)
T ss_dssp             CCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhccCCCCchHHHHHH
Confidence            43 456888999999999999999999999999999954   48999999999999999999999987

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.96  E-value=1.3e-28  Score=215.19  Aligned_cols=158  Identities=22%  Similarity=0.169  Sum_probs=121.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec-CCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh----HHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR-SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT----KYHRRC  116 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~  116 (265)
                      ..|+||+++||||++|||+++|++|+++|++|++++| +++.++++.+++....  +.++.++.+|++|+    ++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   84 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLCKGDLSLSSSLLDCCEDI   84 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSTTHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc--CCceEEEeccCCCccccHHHHHHH
Confidence            3578999999999999999999999999999999999 8777777777665542  24677888888888    777777


Q ss_pred             HHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecc
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA  196 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnA  196 (265)
                      ++.+.+.+|++|++|||||                                                             
T Consensus        85 ~~~~~~~~g~id~lv~nAg-------------------------------------------------------------  103 (276)
T 1mxh_A           85 IDCSFRAFGRCDVLVNNAS-------------------------------------------------------------  103 (276)
T ss_dssp             HHHHHHHHSCCCEEEECCC-------------------------------------------------------------
T ss_pred             HHHHHHhcCCCCEEEECCC-------------------------------------------------------------
Confidence            5555555555555555555                                                             


Q ss_pred             cccccccccccch-----------HHHHhhhhhhhhHHHHHHHHHHHHhhhhcCC------ceEEEEcccccccCCCCCC
Q psy9256         197 GRSQRAAWEDIEL-----------EVDRELFELNVFSVLSLSRIATSYFLAREQG------GHLVVTSSIAGIVGAPYSG  259 (265)
Q Consensus       197 G~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~------g~IV~isS~ag~~~~~~~~  259 (265)
                       .....++.+.+.           ++|++.+++|+.++++++++++|.|. ++ .      |+||++||.++..+.++.+
T Consensus       104 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~-~~~~~~~g~iv~isS~~~~~~~~~~~  180 (276)
T 1mxh_A          104 -AYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EG-GAWRSRNLSVVNLCDAMTDLPLPGFC  180 (276)
T ss_dssp             -CCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCCEEEEEECCGGGGSCCTTCH
T ss_pred             -CCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cC-CCCCCCCcEEEEECchhhcCCCCCCe
Confidence             443344445555           89999999999999999999999997 43 4      8999999999999999999


Q ss_pred             ccccCC
Q psy9256         260 SYTDHL  265 (265)
Q Consensus       260 ~Y~asK  265 (265)
                      .|++||
T Consensus       181 ~Y~asK  186 (276)
T 1mxh_A          181 VYTMAK  186 (276)
T ss_dssp             HHHHHH
T ss_pred             ehHHHH
Confidence            999987

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.96  E-value=1.1e-28  Score=214.46  Aligned_cols=157  Identities=29%  Similarity=0.350  Sum_probs=128.9

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++   .   .++.++++|++|+++++++    
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~d~~~v~~~----   76 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL---E---NGGFAVEVDVTKRASVDAA----   76 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---T---TCCEEEECCTTCHHHHHHH----
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---h---cCCeEEEEeCCCHHHHHHH----
Confidence            45688999999999999999999999999999999999876555443321   1   1455667777777776666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||...
T Consensus        77 ----------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~~~   98 (263)
T 3ak4_A           77 ----------------------------------------------------------MQKAIDALGGFDLLCANAGVST   98 (263)
T ss_dssp             ----------------------------------------------------------HHHHHHHHTCCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCcCC
Confidence                                                                      6666666677777777777666


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.++++++++++|.|++++..|+||++||.++..+.|+.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (263)
T 3ak4_A           99 MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASK  163 (263)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHH
Confidence            66778899999999999999999999999999998764359999999999999999999999987

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.96  E-value=2.3e-28  Score=214.27  Aligned_cols=153  Identities=31%  Similarity=0.436  Sum_probs=131.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +++|+++||||++|||.++|++|+++|++|++++|+.+.++++.+..      +.++.++.+|++|+++++++       
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~~~~~-------   69 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY------PDRAEAISLDVTDGERIDVV-------   69 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC------TTTEEEEECCTTCHHHHHHH-------
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCceEEEeeCCCHHHHHHH-------
Confidence            56899999999999999999999999999999999988776654432      24677778888888777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.+++|++|++|||||.....+
T Consensus        70 -------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~~~~~   94 (281)
T 3m1a_A           70 -------------------------------------------------------AADVLARYGRVDVLVNNAGRTQVGA   94 (281)
T ss_dssp             -------------------------------------------------------HHHHHHHHSCCSEEEECCCCEEECC
T ss_pred             -------------------------------------------------------HHHHHHhCCCCCEEEECCCcCCCCC
Confidence                                                                   6666666777777777777777778


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++.+++|+.|++++++.++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        95 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (281)
T 3m1a_A           95 FEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSFAGFSAYSATK  155 (281)
T ss_dssp             TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCCCCchHHHHHH
Confidence            88999999999999999999999999999998876 79999999999999999999999987

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=6.3e-29  Score=216.67  Aligned_cols=153  Identities=27%  Similarity=0.361  Sum_probs=123.0

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |.+|++|+++||||++|||++++++|+++|++|++++|+++.++++.+++   .   .++.++++|++|+++++++    
T Consensus         1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~v~~~----   70 (263)
T 2a4k_A            1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---E---AEAIAVVADVSDPKAVEAV----   70 (263)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---C---SSEEEEECCTTSHHHHHHH----
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---c---CceEEEEcCCCCHHHHHHH----
Confidence            34678999999999999999999999999999999999876665544322   1   3566677777777777766    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||...
T Consensus        71 ----------------------------------------------------------~~~~~~~~g~iD~lvnnAg~~~   92 (263)
T 2a4k_A           71 ----------------------------------------------------------FAEALEEFGRLHGVAHFAGVAH   92 (263)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSCCCEEEEGGGGTT
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCcEEEECCCCCC
Confidence                                                                      6666666677777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++++++|+.|+++++++++|.| ++  .|+||++||.++. +.++.+.|++||
T Consensus        93 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~-~~~~~~~Y~asK  153 (263)
T 2a4k_A           93 SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL-GAFGLAHYAAGK  153 (263)
T ss_dssp             TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC-CHHHHHHHHHCS
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc-CCCCcHHHHHHH
Confidence            6677888999999999999999999999999999 44  5999999999998 878889999998

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.96  E-value=1.7e-28  Score=215.88  Aligned_cols=158  Identities=23%  Similarity=0.281  Sum_probs=124.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+.++++.+.   .   +.++.++.+|++|+++++++++.+.+
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---H---GGNAVGVVGDVRSLQDQKRAAERCLA   75 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---T---BTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH---c---CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999987766654433   2   35778888888888888888666655


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                      .+|++|+||||||+.....                                                         ....
T Consensus        76 ~~g~iD~lvnnAg~~~~~~---------------------------------------------------------~~~~   98 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIWDYST---------------------------------------------------------ALAD   98 (281)
T ss_dssp             HHSCCCEEECCCCCCCTTC---------------------------------------------------------CGGG
T ss_pred             hcCCCCEEEECCCcCcccc---------------------------------------------------------cccc
Confidence            5555555555555322110                                                         0011


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...+.+.++|++++++|+.|+++++++++|+|++++  |+||++||.++..+.++.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK  159 (281)
T 3zv4_A           99 LPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR--GSVVFTISNAGFYPNGGGPLYTATK  159 (281)
T ss_dssp             SCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSSSSSCHHHHHHH
T ss_pred             CChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CeEEEEecchhccCCCCCchhHHHH
Confidence            223456678999999999999999999999998764  9999999999999999999999987

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.95  E-value=2.2e-28  Score=219.85  Aligned_cols=180  Identities=17%  Similarity=0.101  Sum_probs=132.1

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEe-cCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      ..|..+++|+++||||++|||+++|++|+++|++|++++ |+++.++++.+++....  +.++.++++|++|++.+....
T Consensus        39 ~~m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~d~~~~~~~~  116 (328)
T 2qhx_A           39 SHMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR--PNSAITVQADLSNVATAPVSG  116 (328)
T ss_dssp             ------CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSCBCC---
T ss_pred             CcccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc--CCeEEEEEeeCCCchhccccc
Confidence            345568899999999999999999999999999999999 98888877777665222  357888999999987111100


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                   ..-.+.+++.++++++++++.+.+|++|+||||||
T Consensus       117 ---------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG  151 (328)
T 2qhx_A          117 ---------------------------------------------ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNAS  151 (328)
T ss_dssp             -------------------------------------------------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             ---------------------------------------------cccccccccHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence                                                         00012233444555556666666666666666666


Q ss_pred             ccccccccccc--------------hHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-----CceEEEEcccccccCCCCC
Q psy9256         198 RSQRAAWEDIE--------------LEVDRELFELNVFSVLSLSRIATSYFLAREQ-----GGHLVVTSSIAGIVGAPYS  258 (265)
Q Consensus       198 ~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-----~g~IV~isS~ag~~~~~~~  258 (265)
                      +....++.+.+              .++|++++++|+.++++++++++|.|.+++.     .|+||++||.++..+.+++
T Consensus       152 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~  231 (328)
T 2qhx_A          152 SFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGY  231 (328)
T ss_dssp             CCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTC
T ss_pred             CCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCCCCc
Confidence            65555555666              8999999999999999999999999976531     5899999999999999999


Q ss_pred             CccccCC
Q psy9256         259 GSYTDHL  265 (265)
Q Consensus       259 ~~Y~asK  265 (265)
                      ..|++||
T Consensus       232 ~~Y~asK  238 (328)
T 2qhx_A          232 TIYTMAK  238 (328)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999987

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.95  E-value=2.5e-28  Score=215.81  Aligned_cols=156  Identities=24%  Similarity=0.353  Sum_probs=126.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHH-HHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE-RVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+... .+.+.+...   +.++.++++|++|+++++++    
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~----  115 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE---GVKCVLLPGDLSDEQHCKDI----  115 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT---TCCEEEEESCTTSHHHHHHH----
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHH----
Confidence            4678999999999999999999999999999999999876433 333333322   35677777777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|+||||||...
T Consensus       116 ----------------------------------------------------------~~~~~~~~g~iD~lvnnAg~~~  137 (291)
T 3ijr_A          116 ----------------------------------------------------------VQETVRQLGSLNILVNNVAQQY  137 (291)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSSCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCcC
Confidence                                                                      6666666666666666666653


Q ss_pred             -cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 -RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 -~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                       ..++++.+.++|++.+++|+.|+++++++++|+|++   +|+||++||.++..+.++.+.|++||
T Consensus       138 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK  200 (291)
T 3ijr_A          138 PQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYEGNETLIDYSATK  200 (291)
T ss_dssp             CCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhcCCCCCChhHHHHH
Confidence             356788899999999999999999999999999953   48999999999999999999999987

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.95  E-value=2.5e-28  Score=212.77  Aligned_cols=159  Identities=25%  Similarity=0.332  Sum_probs=130.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEe-cCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++++|+++||||++|||+++|++|+++|++|++.. |+.+..++..+++...+   .++.++.+|++|+++++++    
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~----   94 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG---GNGRLLSFDVANREQCREV----   94 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH----
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHH----
Confidence            467899999999999999999999999999997754 55566666666555443   5677777888887777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||...
T Consensus        95 ----------------------------------------------------------~~~~~~~~g~id~li~nAg~~~  116 (267)
T 4iiu_A           95 ----------------------------------------------------------LEHEIAQHGAWYGVVSNAGIAR  116 (267)
T ss_dssp             ----------------------------------------------------------HHHHHHHHCCCSEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHhCCccEEEECCCCCC
Confidence                                                                      6666666677777777777776


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.|++++++.++|.|.+++..|+||++||.++..+.++++.|++||
T Consensus       117 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (267)
T 4iiu_A          117 DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAK  181 (267)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHH
Confidence            77788899999999999999999999999999997554479999999999999999999999987

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.95  E-value=2e-28  Score=213.17  Aligned_cols=152  Identities=24%  Similarity=0.265  Sum_probs=125.8

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .+|..+++|+++||||++|||+++|++|+++|++|++++|+.+..++            .++.++++|++|+++++++  
T Consensus        21 ~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~~~Dv~d~~~v~~~--   86 (260)
T 3un1_A           21 QSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD------------PDIHTVAGDISKPETADRI--   86 (260)
T ss_dssp             HHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS------------TTEEEEESCTTSHHHHHHH--
T ss_pred             hhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------------CceEEEEccCCCHHHHHHH--
Confidence            45567899999999999999999999999999999999998654321            2566677777777776666  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|++|||||+
T Consensus        87 ------------------------------------------------------------~~~~~~~~g~iD~lv~nAg~  106 (260)
T 3un1_A           87 ------------------------------------------------------------VREGIERFGRIDSLVNNAGV  106 (260)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHCCCCCEEEECCCC
Confidence                                                                        66666677777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC--CCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG--APYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~--~~~~~~Y~asK  265 (265)
                      ....++.+.++++|++.+++|+.|+++++++++|.|++++ .|+||++||.++..+  .++...|++||
T Consensus       107 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sK  174 (260)
T 3un1_A          107 FLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVGMPSALASLTK  174 (260)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTTCCCHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCCCccHHHHHHH
Confidence            7777888999999999999999999999999999998876 799999999888643  44557898887

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.95  E-value=1.7e-28  Score=237.10  Aligned_cols=155  Identities=26%  Similarity=0.402  Sum_probs=126.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC---------CcHHHHHHHHHHhCCCCCcEEEEeecCCChHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS---------SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.         +.++++.+++...+   .+.   .+|++|.++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g---~~~---~~d~~d~~~   77 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG---GVA---VADYNNVLD   77 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTT---CEE---EEECCCTTC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcC---CeE---EEEcCCHHH
Confidence            357899999999999999999999999999999998764         45555555554332   222   245555554


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEE
Q psy9256         113 HRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDIL  192 (265)
Q Consensus       113 ~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldil  192 (265)
                      ++++                                                              ++++.+++|++|+|
T Consensus        78 ~~~~--------------------------------------------------------------v~~~~~~~G~iDiL   95 (604)
T 2et6_A           78 GDKI--------------------------------------------------------------VETAVKNFGTVHVI   95 (604)
T ss_dssp             HHHH--------------------------------------------------------------HHHHHHHHSCCCEE
T ss_pred             HHHH--------------------------------------------------------------HHHHHHHcCCCCEE
Confidence            4544                                                              77777777778888


Q ss_pred             EecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         193 INNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       193 VnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |||||+....++.+++.++|++++++|+.|+++++|+++|+|++++ .|+|||+||.++..+.|+++.|++||
T Consensus        96 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~~~~~~Y~asK  167 (604)
T 2et6_A           96 INNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNFGQANYASAK  167 (604)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCCCchHHHHHH
Confidence            8888877777889999999999999999999999999999998876 79999999999999999999999998

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=2.7e-28  Score=213.25  Aligned_cols=161  Identities=27%  Similarity=0.349  Sum_probs=134.3

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +++.++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.+.+   .++.++.+|++|+++++++  
T Consensus        24 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~--   98 (272)
T 1yb1_A           24 KRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG---AKVHTFVVDCSNREDIYSS--   98 (272)
T ss_dssp             -CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH--
T ss_pred             CcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC---CeEEEEEeeCCCHHHHHHH--
Confidence            34567899999999999999999999999999999999999877777766665543   4677777888887777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+.++++|++|||||.
T Consensus        99 ------------------------------------------------------------~~~~~~~~g~iD~li~~Ag~  118 (272)
T 1yb1_A           99 ------------------------------------------------------------AKKVKAEIGDVSILVNNAGV  118 (272)
T ss_dssp             ------------------------------------------------------------HHHHHHHTCCCSEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHCCCCcEEEECCCc
Confidence                                                                        66666666777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  184 (272)
T 1yb1_A          119 VYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSK  184 (272)
T ss_dssp             CCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             CCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCchhHHHHH
Confidence            6666777888899999999999999999999999998765 79999999999998888888999887

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.95  E-value=8.7e-28  Score=211.14  Aligned_cols=156  Identities=26%  Similarity=0.370  Sum_probs=127.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+. .+++.+++...+   .++.++.+|++|+++++++    
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~----   97 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG---SDAACVKANVGVVEDIVRM----   97 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH----
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC---CCeEEEEcCCCCHHHHHHH----
Confidence            45789999999999999999999999999999999998754 344444444432   4667777777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.+|++|++|||||...
T Consensus        98 ----------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~~~  119 (283)
T 1g0o_A           98 ----------------------------------------------------------FEEAVKIFGKLDIVCSNSGVVS  119 (283)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSCCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCcCC
Confidence                                                                      6666666667777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCC-CCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY-SGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~-~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.|+++++++++|.|.  + .|+||++||.++..+.+. .+.|++||
T Consensus       120 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-~g~iv~isS~~~~~~~~~~~~~Y~asK  182 (283)
T 1g0o_A          120 FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I-GGRLILMGSITGQAKAVPKHAVYSGSK  182 (283)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T-TCEEEEECCGGGTCSSCSSCHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c-CCeEEEEechhhccCCCCCCcchHHHH
Confidence            66788899999999999999999999999999992  2 599999999999887764 88999987

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=1.2e-28  Score=216.38  Aligned_cols=157  Identities=25%  Similarity=0.430  Sum_probs=120.8

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC------------CCcHHHHHHHHHHhCCCCCcEEEEeec
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS------------SSNLERVKNLCVQAGAHPQSIYTLTLD  106 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~D  106 (265)
                      .+|.+++||+++||||++|||+++|++|+++|++|++++|+            .+.+++...++...   +.++.++++|
T Consensus         3 ~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D   79 (287)
T 3pxx_A            3 GSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT---GRKAYTAEVD   79 (287)
T ss_dssp             TSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT---TSCEEEEECC
T ss_pred             CcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc---CCceEEEEcc
Confidence            35678999999999999999999999999999999999987            23333333333322   2456666666


Q ss_pred             CCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc
Q psy9256         107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF  186 (265)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~  186 (265)
                      ++|+++++++                                                              ++++.+++
T Consensus        80 ~~~~~~v~~~--------------------------------------------------------------~~~~~~~~   97 (287)
T 3pxx_A           80 VRDRAAVSRE--------------------------------------------------------------LANAVAEF   97 (287)
T ss_dssp             TTCHHHHHHH--------------------------------------------------------------HHHHHHHH
T ss_pred             CCCHHHHHHH--------------------------------------------------------------HHHHHHHc
Confidence            6666666666                                                              66666666


Q ss_pred             ccccEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC-----------
Q psy9256         187 GCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA-----------  255 (265)
Q Consensus       187 g~ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~-----------  255 (265)
                      |++|+||||||+....  .+.+.++|++.+++|+.|+++++++++|+|.  + +|+||++||.++..+.           
T Consensus        98 g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-~g~iv~isS~~~~~~~~~~~~~~~~~~  172 (287)
T 3pxx_A           98 GKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT--S-GASIITTGSVAGLIAAAQPPGAGGPQG  172 (287)
T ss_dssp             SCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--T-TCEEEEECCHHHHHHHHCCC-----CH
T ss_pred             CCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--c-CcEEEEeccchhcccccccccccccCC
Confidence            6666666666665444  2377899999999999999999999999993  2 5899999999988765           


Q ss_pred             CCCCccccCC
Q psy9256         256 PYSGSYTDHL  265 (265)
Q Consensus       256 ~~~~~Y~asK  265 (265)
                      ++.+.|++||
T Consensus       173 ~~~~~Y~asK  182 (287)
T 3pxx_A          173 PGGAGYSYAK  182 (287)
T ss_dssp             HHHHHHHHHH
T ss_pred             CccchHHHHH
Confidence            6678899887

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.95  E-value=8.9e-28  Score=207.58  Aligned_cols=162  Identities=20%  Similarity=0.281  Sum_probs=134.0

Q ss_pred             hhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          38 NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        38 ~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      .++..++++|+++||||++|||++++++|+++|++|++++|+++..+++.+.+...+   .++.++.+|++|+++++++ 
T Consensus         5 ~~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~-   80 (260)
T 3awd_A            5 YMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG---HDVSSVVMDVTNTESVQNA-   80 (260)
T ss_dssp             TTGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH-
T ss_pred             cccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHH-
Confidence            345567889999999999999999999999999999999998877776666655432   4677778888888777777 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.++++++|++|||||
T Consensus        81 -------------------------------------------------------------~~~~~~~~~~id~vi~~Ag   99 (260)
T 3awd_A           81 -------------------------------------------------------------VRSVHEQEGRVDILVACAG   99 (260)
T ss_dssp             -------------------------------------------------------------HHHHHHHHSCCCEEEECCC
T ss_pred             -------------------------------------------------------------HHHHHHHcCCCCEEEECCC
Confidence                                                                         5556666666677777776


Q ss_pred             ccc-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCC--CccccCC
Q psy9256         198 RSQ-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS--GSYTDHL  265 (265)
Q Consensus       198 ~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~--~~Y~asK  265 (265)
                      ... ..++.+.+.++|++.+++|+.+++++++.+.|.|.+++ .|+||++||.++..+.++.  +.|++||
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~Y~~sK  169 (260)
T 3awd_A          100 ICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAAYNASK  169 (260)
T ss_dssp             CCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCCHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCCCCCccccHHHH
Confidence            655 56677888999999999999999999999999998765 7999999999998887777  8899887

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.95  E-value=9.9e-28  Score=207.57  Aligned_cols=159  Identities=26%  Similarity=0.358  Sum_probs=132.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec-CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR-SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++++|+++||||++|||++++++|+++|++|++++| +++.++++.+++...+   .++.++.+|++|+++++++    
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~----   75 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG---GEAIAVKGDVTVESDVINL----   75 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHH----
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHH----
Confidence            4578999999999999999999999999999999999 6666666666554432   4667777787777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||...
T Consensus        76 ----------------------------------------------------------~~~~~~~~g~id~li~~Ag~~~   97 (261)
T 1gee_A           76 ----------------------------------------------------------VQSAIKEFGKLDVMINNAGLEN   97 (261)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSCCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666666667777777777666


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.+++++++.++|.|.+++..|+||++||.++..+.++.+.|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (261)
T 1gee_A           98 PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK  162 (261)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHH
Confidence            66777888999999999999999999999999998754358999999999999999999999987

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=3.7e-28  Score=212.49  Aligned_cols=154  Identities=26%  Similarity=0.410  Sum_probs=126.7

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +.+++||+++||||++|||++++++|+++|++|++++|+++.++++.+++       .++.++++|++|+++++++    
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~----   72 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-------PGAVFILCDVTQEDDVKTL----   72 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------TTEEEEECCTTSHHHHHHH----
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------cCCeEEEcCCCCHHHHHHH----
Confidence            34688999999999999999999999999999999999876665544322       1356677777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||...
T Consensus        73 ----------------------------------------------------------~~~~~~~~g~iD~lv~nAg~~~   94 (270)
T 1yde_A           73 ----------------------------------------------------------VSETIRRFGRLDCVVNNAGHHP   94 (270)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSCCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      5666666666666666666653


Q ss_pred             -cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 -RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 -~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                       ..++.+.+.++|++.+++|+.++++++++++|+|.++  .|+||++||.++..+.++.+.|++||
T Consensus        95 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  158 (270)
T 1yde_A           95 PPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYVATK  158 (270)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCccccCCCCCCcccHHHH
Confidence             3567888999999999999999999999999999765  49999999999999999999999987

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.95  E-value=7.8e-28  Score=209.16  Aligned_cols=161  Identities=17%  Similarity=0.255  Sum_probs=125.9

Q ss_pred             HhhhhccccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHH
Q psy9256          36 KINKRLNYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYH  113 (265)
Q Consensus        36 ~~~~~~~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~  113 (265)
                      +...+...+++|+++||||+  +|||+++|++|+++|++|++++|+....+.+.+...+.+    ++.++.+|++|++++
T Consensus         4 ~~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~~~~~v   79 (271)
T 3ek2_A            4 HHHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG----SELVFPCDVADDAQI   79 (271)
T ss_dssp             -----CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT----CCCEEECCTTCHHHH
T ss_pred             CCCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC----CcEEEECCCCCHHHH
Confidence            34456678899999999998  999999999999999999999998655544444333332    366677777777777


Q ss_pred             HHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEE
Q psy9256         114 RRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILI  193 (265)
Q Consensus       114 ~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilV  193 (265)
                      +++                                                              ++++.+++|++|++|
T Consensus        80 ~~~--------------------------------------------------------------~~~~~~~~g~id~lv   97 (271)
T 3ek2_A           80 DAL--------------------------------------------------------------FASLKTHWDSLDGLV   97 (271)
T ss_dssp             HHH--------------------------------------------------------------HHHHHHHCSCEEEEE
T ss_pred             HHH--------------------------------------------------------------HHHHHHHcCCCCEEE
Confidence            777                                                              555555556666666


Q ss_pred             eccccccc----ccccc-cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         194 NNAGRSQR----AAWED-IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       194 nnAG~~~~----~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ||||+...    .++.+ .+.++|++.+++|+.++++++++++|.|.+   +|+||++||.++..+.|+++.|++||
T Consensus        98 ~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK  171 (271)
T 3ek2_A           98 HSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERAIPNYNTMGLAK  171 (271)
T ss_dssp             ECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             ECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEeccccccCCCCccchhHHH
Confidence            66665543    44555 889999999999999999999999999964   48999999999999999999999987

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.95  E-value=9.5e-28  Score=208.33  Aligned_cols=158  Identities=26%  Similarity=0.314  Sum_probs=126.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++.++++|++|+++++++++.+.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG---GQCVPVVCDSSQESEVRSLFEQVDR   78 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---SEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC---CceEEEECCCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999888777777665543   4677888888888888888555544


Q ss_pred             H-hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc--
Q psy9256         123 Q-FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS--  199 (265)
Q Consensus       123 ~-~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~--  199 (265)
                      . +|++|++|||||.                                                            |..  
T Consensus        79 ~~~g~id~lvnnAg~------------------------------------------------------------g~~~~   98 (260)
T 2qq5_A           79 EQQGRLDVLVNNAYA------------------------------------------------------------GVQTI   98 (260)
T ss_dssp             HHTTCCCEEEECCCT------------------------------------------------------------THHHH
T ss_pred             hcCCCceEEEECCcc------------------------------------------------------------ccccc
Confidence            3 4555555555531                                                            221  


Q ss_pred             ---ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 ---QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ---~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                         ...++.+.+.++|++++++|+.+++++++.++|.|++++ .|+||++||.++..+. ..+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-~~~~Y~asK  165 (260)
T 2qq5_A           99 LNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYM-FNVPYGVGK  165 (260)
T ss_dssp             HHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSCC-SSHHHHHHH
T ss_pred             cccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCCC-CCCchHHHH
Confidence               234667888899999999999999999999999998765 6999999999988754 457899987

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.95  E-value=1.5e-27  Score=209.90  Aligned_cols=157  Identities=18%  Similarity=0.222  Sum_probs=123.9

Q ss_pred             ccccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        41 ~~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      |..++||+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++....   +++.++++|++|+++++++  
T Consensus        16 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~--   89 (285)
T 2p91_A           16 MGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGF---GSDLVVKCDVSLDEDIKNL--   89 (285)
T ss_dssp             -CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT---TCCCEEECCTTCHHHHHHH--
T ss_pred             hhccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHH--
Confidence            345889999999999  99999999999999999999999875 333334333322   1255677777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+++|++|++|||||.
T Consensus        90 ------------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~  109 (285)
T 2p91_A           90 ------------------------------------------------------------KKFLEENWGSLDIIVHSIAY  109 (285)
T ss_dssp             ------------------------------------------------------------HHHHHHHTSCCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCC
Confidence                                                                        55555555566666666665


Q ss_pred             ccc----ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQR----AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...    .++.+.+.++|++.+++|+.|++++++.++|.|.++  +|+||++||.++..+.|+++.|++||
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK  178 (285)
T 2p91_A          110 APKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAEKVVPHYNVMGIAK  178 (285)
T ss_dssp             CCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhccCCCCccHHHHHH
Confidence            432    567788999999999999999999999999999754  59999999999999999999999987

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.95  E-value=7.4e-28  Score=207.03  Aligned_cols=158  Identities=30%  Similarity=0.433  Sum_probs=130.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.+++..+.+   .. ..++.++.+|++|+++++++     
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~~D~~~~~~~~~~-----   72 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---GT-PDQIQFFQHDSSDEDGWTKL-----   72 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CC-TTTEEEEECCTTCHHHHHHH-----
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---hc-cCceEEEECCCCCHHHHHHH-----
Confidence            4578999999999999999999999999999999999876665544433   11 14566777777777777766     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.++++++|++|||||....
T Consensus        73 ---------------------------------------------------------~~~~~~~~~~id~li~~Ag~~~~   95 (251)
T 1zk4_A           73 ---------------------------------------------------------FDATEKAFGPVSTLVNNAGIAVN   95 (251)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSSCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHhCCCCEEEECCCCCCC
Confidence                                                                     66666666777777777777666


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++++++.++|.|.+++.+|+||++||.++..+.++.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (251)
T 1zk4_A           96 KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHH
Confidence            6778889999999999999999999999999998765238999999999999999999999987

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.95  E-value=1.1e-27  Score=208.38  Aligned_cols=157  Identities=15%  Similarity=0.216  Sum_probs=125.9

Q ss_pred             cccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.+..+.+.+...+.+  ..++.++.+|++|+++++++   
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~---   77 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD--RNDSIILPCDVTNDAEIETC---   77 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS--SCCCEEEECCCSSSHHHHHH---
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC--CCCceEEeCCCCCHHHHHHH---
Confidence            36889999999999  779999999999999999999998765555555444333  23677777888887777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|++|||||..
T Consensus        78 -----------------------------------------------------------~~~~~~~~g~id~li~~Ag~~   98 (266)
T 3oig_A           78 -----------------------------------------------------------FASIKEQVGVIHGIAHCIAFA   98 (266)
T ss_dssp             -----------------------------------------------------------HHHHHHHHSCCCEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHhCCeeEEEEccccc
Confidence                                                                       444444555555555555554


Q ss_pred             c----cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 Q----RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .    ..++.+.+.++|++.+++|+.+++++++.++|.|.+   +|+||++||.++..+.|+.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK  165 (266)
T 3oig_A           99 NKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGELVMPNYNVMGVAK  165 (266)
T ss_dssp             CGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCTTTHHHHHHH
T ss_pred             cccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEecccccccCCCcchhHHHH
Confidence            3    356778899999999999999999999999999963   58999999999999999999999987

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.95  E-value=1.9e-27  Score=208.10  Aligned_cols=161  Identities=22%  Similarity=0.271  Sum_probs=131.7

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +++.++++|+++||||++|||.+++++|+++|++|++++|+.+..+++.+++...+   .++.++.+|++|+++++++  
T Consensus        27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~--  101 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG---VHSKAYKCNISDPKSVEET--  101 (279)
T ss_dssp             GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHC---SCEEEEECCTTCHHHHHHH--
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcceEEEeecCCHHHHHHH--
Confidence            34456899999999999999999999999999999999999888877776665543   4677778888888777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.+.++++|++|||||.
T Consensus       102 ------------------------------------------------------------~~~~~~~~g~id~li~~Ag~  121 (279)
T 3ctm_A          102 ------------------------------------------------------------ISQQEKDFGTIDVFVANAGV  121 (279)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCSEEEECGGG
T ss_pred             ------------------------------------------------------------HHHHHHHhCCCCEEEECCcc
Confidence                                                                        55555556666666666666


Q ss_pred             ccc-cccc-ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC--CCCCCccccCC
Q psy9256         199 SQR-AAWE-DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG--APYSGSYTDHL  265 (265)
Q Consensus       199 ~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~--~~~~~~Y~asK  265 (265)
                      ... .++. +.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+  .++.+.|++||
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~sK  191 (279)
T 3ctm_A          122 TWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQLQAPYNTAK  191 (279)
T ss_dssp             STTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC---CCHHHHHHHH
T ss_pred             cccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCCCCCcccHHHHH
Confidence            544 5566 788899999999999999999999999998765 799999999999888  78888999887

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.95  E-value=3.7e-28  Score=209.65  Aligned_cols=149  Identities=24%  Similarity=0.368  Sum_probs=116.7

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ...++++|+++||||++|||++++++|+++|++|++++|+++.++++              ..+.+|++|+++++++   
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------------~~~~~D~~~~~~~~~~---   71 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL--------------FGVEVDVTDSDAVDRA---   71 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS--------------EEEECCTTCHHHHHHH---
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh--------------cCeeccCCCHHHHHHH---
Confidence            34568899999999999999999999999999999999987654321              1266777777766666   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|++|||||..
T Consensus        72 -----------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~   92 (247)
T 1uzm_A           72 -----------------------------------------------------------FTAVEEHQGPVEVLVSNAGLS   92 (247)
T ss_dssp             -----------------------------------------------------------HHHHHHHHSSCSEEEEECSCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCCC
Confidence                                                                       666666667777777777776


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++++++|+.++++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        93 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (247)
T 1uzm_A           93 ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASK  157 (247)
T ss_dssp             C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCCCCChhHHHHH
Confidence            666778899999999999999999999999999998765 69999999999999999999999987

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.95  E-value=2e-28  Score=212.35  Aligned_cols=148  Identities=23%  Similarity=0.373  Sum_probs=120.5

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+++.++              ++.++++|++|+++++++    
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~Dl~d~~~v~~~----   77 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------------GFLAVKCDITDTEQVEQA----   77 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTSHHHHHHH----
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------------cceEEEecCCCHHHHHHH----
Confidence            35678999999999999999999999999999999999876542              245677777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||...
T Consensus        78 ----------------------------------------------------------~~~~~~~~g~iD~lv~nAg~~~   99 (253)
T 2nm0_A           78 ----------------------------------------------------------YKEIEETHGPVEVLIANAGVTK   99 (253)
T ss_dssp             ----------------------------------------------------------HHHHHHHTCSCSEEEEECSCCT
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCCC
Confidence                                                                      6666666677777777777666


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.++++|++.+++|+.++++++++++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus       100 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  163 (253)
T 2nm0_A          100 DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSAGQANYAASK  163 (253)
T ss_dssp             TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCHHHHHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCcHHHHHHH
Confidence            66778889999999999999999999999999998775 79999999999998888888999887

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.95  E-value=1.2e-27  Score=209.99  Aligned_cols=158  Identities=16%  Similarity=0.197  Sum_probs=122.7

Q ss_pred             hhccccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ..|..++||+++||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+..   .++.++.+|++|+++++++
T Consensus        19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~   93 (280)
T 3nrc_A           19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF---NPAAVLPCDVISDQEIKDL   93 (280)
T ss_dssp             ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG---CCSEEEECCTTCHHHHHHH
T ss_pred             CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc---CCceEEEeecCCHHHHHHH
Confidence            45678899999999988  8899999999999999999999987  223333333222   2466777788777777777


Q ss_pred             HHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecc
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA  196 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnA  196 (265)
                                                                                    ++++.++++++|++||||
T Consensus        94 --------------------------------------------------------------~~~~~~~~g~id~li~nA  111 (280)
T 3nrc_A           94 --------------------------------------------------------------FVELGKVWDGLDAIVHSI  111 (280)
T ss_dssp             --------------------------------------------------------------HHHHHHHCSSCCEEEECC
T ss_pred             --------------------------------------------------------------HHHHHHHcCCCCEEEECC
Confidence                                                                          555555555555555555


Q ss_pred             ccccc----ccccc-cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         197 GRSQR----AAWED-IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       197 G~~~~----~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |....    .++.+ .+.++|++.+++|+.++++++++++|.|.++  +|+||++||.++..+.|+.+.|++||
T Consensus       112 g~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  183 (280)
T 3nrc_A          112 AFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTYIGAEKAMPSYNTMGVAK  183 (280)
T ss_dssp             CCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECGGGTSCCTTTHHHHHHH
T ss_pred             ccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEeccccccCCCCchhhHHHH
Confidence            55432    34445 8889999999999999999999999999865  59999999999999999999999987

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.95  E-value=9.7e-28  Score=210.00  Aligned_cols=155  Identities=17%  Similarity=0.244  Sum_probs=124.6

Q ss_pred             cccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..++||+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..   +++.++++|++|+++++++   
T Consensus         2 ~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~---   74 (275)
T 2pd4_A            2 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL---NSPYVYELDVSKEEHFKSL---   74 (275)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT---TCCCEEECCTTCHHHHHHH---
T ss_pred             CCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc---CCcEEEEcCCCCHHHHHHH---
Confidence            45789999999999  99999999999999999999999886 444444443322   1256677777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|++|||||..
T Consensus        75 -----------------------------------------------------------~~~~~~~~g~id~lv~nAg~~   95 (275)
T 2pd4_A           75 -----------------------------------------------------------YNSVKKDLGSLDFIVHSVAFA   95 (275)
T ss_dssp             -----------------------------------------------------------HHHHHHHTSCEEEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCccC
Confidence                                                                       555555566666666666655


Q ss_pred             cc----ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QR----AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..    .++.+.+.++|++.+++|+.|+++++++++|.|++   +|+||++||.++..+.++.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK  162 (275)
T 2pd4_A           96 PKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTKYMAHYNVMGLAK  162 (275)
T ss_dssp             CGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             ccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhcCCCCCchhhHHHH
Confidence            43    56778899999999999999999999999999963   48999999999999999999999987

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.95  E-value=1.6e-27  Score=205.87  Aligned_cols=147  Identities=26%  Similarity=0.313  Sum_probs=125.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||++++++|+++|++|++++|+++.           ..  ..+.++.+|++|+++++++      
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----------~~--~~~~~~~~D~~d~~~~~~~------   64 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----------EQ--YPFATEVMDVADAAQVAQV------   64 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----------SC--CSSEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----------hc--CCceEEEcCCCCHHHHHHH------
Confidence            4789999999999999999999999999999999998652           00  1155666777777776666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|++|||||.....
T Consensus        65 --------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~~~~   88 (250)
T 2fwm_X           65 --------------------------------------------------------CQRLLAETERLDALVNAAGILRMG   88 (250)
T ss_dssp             --------------------------------------------------------HHHHHHHCSCCCEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCCC
Confidence                                                                    666667777777777777776667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        89 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (250)
T 2fwm_X           89 ATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPRIGMSAYGASK  150 (250)
T ss_dssp             CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCCchHHHHH
Confidence            788899999999999999999999999999998776 79999999999999999999999987

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.95  E-value=5.1e-28  Score=233.71  Aligned_cols=154  Identities=27%  Similarity=0.435  Sum_probs=127.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++.+|+  .++++.+++.+.+   .++..+.+|++  ++.+++     
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g---~~~~~~~~Dv~--~~~~~~-----  385 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAG---GEAWPDQHDVA--KDSEAI-----  385 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTT---CEEEEECCCHH--HHHHHH-----
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcC---CeEEEEEcChH--HHHHHH-----
Confidence            36889999999999999999999999999999998863  3455555555432   45666666763  333444     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||+...
T Consensus       386 ---------------------------------------------------------~~~~~~~~G~iDiLVnNAGi~~~  408 (604)
T 2et6_A          386 ---------------------------------------------------------IKNVIDKYGTIDILVNNAGILRD  408 (604)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCCEEEECCCCCCC
Confidence                                                                     66666677778888888887777


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.++++++|++++++|+.|+++++|+++|+|++++ +|+|||+||.+|..+.|+++.|++||
T Consensus       409 ~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~~~~~~Y~asK  471 (604)
T 2et6_A          409 RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNFGQANYSSSK  471 (604)
T ss_dssp             BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCCChhHHHHH
Confidence            7889999999999999999999999999999998765 79999999999999999999999998

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.95  E-value=1.7e-27  Score=204.18  Aligned_cols=155  Identities=26%  Similarity=0.386  Sum_probs=130.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-------eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-------KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      ++|+++||||++|||++++++|+++|+       +|++++|+++.++++.+++...   +.++.++.+|++|+++++++ 
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~-   76 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE---GALTDTITADISDMADVRRL-   76 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT---TCEEEEEECCTTSHHHHHHH-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc---CCeeeEEEecCCCHHHHHHH-
Confidence            378999999999999999999999999       9999999877776666555432   34677777788877777777 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.++++++|++|||||
T Consensus        77 -------------------------------------------------------------~~~~~~~~g~id~li~~Ag   95 (244)
T 2bd0_A           77 -------------------------------------------------------------TTHIVERYGHIDCLVNNAG   95 (244)
T ss_dssp             -------------------------------------------------------------HHHHHHHTSCCSEEEECCC
T ss_pred             -------------------------------------------------------------HHHHHHhCCCCCEEEEcCC
Confidence                                                                         6666666677777777777


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (244)
T 2bd0_A           96 VGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYCMSK  162 (244)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCCCCCchhHHHH
Confidence            76667778889999999999999999999999999998765 79999999999999999999999987

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.95  E-value=2.1e-27  Score=205.74  Aligned_cols=157  Identities=24%  Similarity=0.258  Sum_probs=126.9

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++      +.++.++++|++|+++++++++.+
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~   80 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCVFAPADVTSEKDVQTALALA   80 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh------CCceEEEEcCCCCHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999988877665544      246788888888888888885555


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                      .+.+|++|++|||||                                                              ...
T Consensus        81 ~~~~g~id~li~~Ag--------------------------------------------------------------~~~   98 (265)
T 2o23_A           81 KGKFGRVDVAVNCAG--------------------------------------------------------------IAV   98 (265)
T ss_dssp             HHHHSCCCEEEECCC--------------------------------------------------------------CCC
T ss_pred             HHHCCCCCEEEECCc--------------------------------------------------------------cCC
Confidence            555555555555554                                                              433


Q ss_pred             ccccc------ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc-----CCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWE------DIELEVDRELFELNVFSVLSLSRIATSYFLARE-----QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~------~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~-----~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.      +.+.++|++.+++|+.+++++++++.|.|.++.     ..|+||++||.++..+.++.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  174 (265)
T 2o23_A           99 ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASK  174 (265)
T ss_dssp             CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCchhHHHH
Confidence            32222      477899999999999999999999999998761     268999999999999999999999987

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.95  E-value=2e-27  Score=208.36  Aligned_cols=157  Identities=18%  Similarity=0.247  Sum_probs=129.4

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|+.+.++++.+++      +.++.++.+|++|+++++++   
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~---   94 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL------GNRAEFVSTNVTSEDSVLAA---   94 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTTCHHHHHHH---
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCceEEEEcCCCCHHHHHHH---
Confidence            456889999999999999999999999999999999999887777665554      24677888888888888777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEec-ccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN-AGR  198 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn-AG~  198 (265)
                                                                                 ++++ ++++++|++||| ||.
T Consensus        95 -----------------------------------------------------------~~~~-~~~~~id~lv~~aag~  114 (281)
T 3ppi_A           95 -----------------------------------------------------------IEAA-NQLGRLRYAVVAHGGF  114 (281)
T ss_dssp             -----------------------------------------------------------HHHH-TTSSEEEEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHH-HHhCCCCeEEEccCcc
Confidence                                                                       5555 556666666666 444


Q ss_pred             cccccc-----cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh-----cCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAW-----EDIELEVDRELFELNVFSVLSLSRIATSYFLAR-----EQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~-----~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~-----~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++     .+.+.++|++.+++|+.+++++++.++|.|.+.     +.+|+||++||.++..+.++.+.|++||
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  191 (281)
T 3ppi_A          115 GVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAK  191 (281)
T ss_dssp             CCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCcccHHHH
Confidence            333332     467889999999999999999999999999762     2368999999999999999999999987

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.95  E-value=1.9e-27  Score=206.44  Aligned_cols=159  Identities=27%  Similarity=0.319  Sum_probs=119.7

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ...+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+   .++.++.+|++++++++++    
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~----   81 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG---FQVTGSVCDASLRPEREKL----   81 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHH----
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeeEEEECCCCCHHHHHHH----
Confidence            346789999999999999999999999999999999998877777666655432   4577777788877777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc-ccccEEEeccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRS  199 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~-g~ldilVnnAG~~  199 (265)
                                                                                ++++.+.+ +++|++|||||..
T Consensus        82 ----------------------------------------------------------~~~~~~~~~~~id~li~~Ag~~  103 (266)
T 1xq1_A           82 ----------------------------------------------------------MQTVSSMFGGKLDILINNLGAI  103 (266)
T ss_dssp             ----------------------------------------------------------HHHHHHHHTTCCSEEEEECCC-
T ss_pred             ----------------------------------------------------------HHHHHHHhCCCCcEEEECCCCC
Confidence                                                                      55555555 6667777777766


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       104 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  168 (266)
T 1xq1_A          104 RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSATK  168 (266)
T ss_dssp             -----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCCCCchHHHHH
Confidence            566777889999999999999999999999999998765 79999999999999889999999987

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.95  E-value=3.1e-28  Score=211.05  Aligned_cols=152  Identities=22%  Similarity=0.291  Sum_probs=114.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+..   .+   +.   +.++.++++|++|+++++++++.+.
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~---~~---~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VA---DL---GDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HH---HT---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HH---hc---CCceEEEECCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999954322   22   12   2567788888888888888855444


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                      + +|+                                                              +|++|||||....
T Consensus        76 ~-~g~--------------------------------------------------------------id~lv~nAg~~~~   92 (257)
T 3tl3_A           76 T-MGT--------------------------------------------------------------LRIVVNCAGTGNA   92 (257)
T ss_dssp             H-HSC--------------------------------------------------------------EEEEEECGGGSHH
T ss_pred             H-hCC--------------------------------------------------------------CCEEEECCCCCCC
Confidence            3 444                                                              5555555554332


Q ss_pred             c----cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh-------cCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 A----AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAR-------EQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~-------~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .    +..+.+.++|++++++|+.|+++++++++|.|.++       +..|+||++||.++..+.++++.|++||
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  167 (257)
T 3tl3_A           93 IRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASK  167 (257)
T ss_dssp             HHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHHH
T ss_pred             cccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHHH
Confidence            2    23458899999999999999999999999999872       2368999999999999999999999987

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.95  E-value=1.9e-27  Score=206.42  Aligned_cols=157  Identities=20%  Similarity=0.260  Sum_probs=122.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHH-HHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER-VKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+.+...+ +.+...+.   +.++.++.+|++|+++++++     
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~-----   75 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV---EERLQFVQADVTKKEDLHKI-----   75 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG---GGGEEEEECCTTSHHHHHHH-----
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHH-----
Confidence            3457999999999999999999999999999999887654332 22222221   24566677777777666666     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc--cc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG--RS  199 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG--~~  199 (265)
                                                                               ++++.++++++|++|||||  ..
T Consensus        76 ---------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~~~   98 (264)
T 3i4f_A           76 ---------------------------------------------------------VEEAMSHFGKIDFLINNAGPYVF   98 (264)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEECCCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHhCCCCEEEECCccccc
Confidence                                                                     6666666667777777777  44


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccc-cc-ccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSI-AG-IVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~-ag-~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.|++++++.++|.|++++ .|+||++||. ++ ..+.++.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~~~Y~asK  165 (264)
T 3i4f_A           99 ERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYRSAFAAAK  165 (264)
T ss_dssp             SCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCCCTTCHHHHHHH
T ss_pred             CCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCCCCCCchhHHHH
Confidence            456788899999999999999999999999999998876 7999999998 44 55777888999987

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=7.8e-28  Score=207.22  Aligned_cols=150  Identities=28%  Similarity=0.331  Sum_probs=123.6

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |..|+||+++||||++|||++++++|+++|++|++++|+++.++++. +   .    .++.++.+|++|+++++      
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~---~----~~~~~~~~D~~~~~~~~------   66 (246)
T 2ag5_A            1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K---Y----PGIQTRVLDVTKKKQID------   66 (246)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G---S----TTEEEEECCTTCHHHHH------
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h---c----cCceEEEeeCCCHHHHH------
Confidence            34678999999999999999999999999999999999865554332 1   1    25666777777776644      


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                  ++.+.++++|++|||||...
T Consensus        67 ------------------------------------------------------------~~~~~~~~id~lv~~Ag~~~   86 (246)
T 2ag5_A           67 ------------------------------------------------------------QFANEVERLDVLFNVAGFVH   86 (246)
T ss_dssp             ------------------------------------------------------------HHHHHCSCCSEEEECCCCCC
T ss_pred             ------------------------------------------------------------HHHHHhCCCCEEEECCccCC
Confidence                                                                        23344567777888877776


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC-CCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP-YSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~-~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||.++..+.+ +.+.|++||
T Consensus        87 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~~sK  151 (246)
T 2ag5_A           87 HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTK  151 (246)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCCCCCccHHHHH
Confidence            67788899999999999999999999999999998775 79999999999998888 888999987

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.95  E-value=1.4e-27  Score=205.64  Aligned_cols=157  Identities=25%  Similarity=0.331  Sum_probs=117.7

Q ss_pred             HhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHH
Q psy9256          36 KINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRR  115 (265)
Q Consensus        36 ~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (265)
                      +...+..++++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++   .   .+..+..+|+++.+++.+
T Consensus         4 ~~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~~~~   77 (249)
T 3f9i_A            4 HHHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL---K---DNYTIEVCNLANKEECSN   77 (249)
T ss_dssp             -----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C---SSEEEEECCTTSHHHHHH
T ss_pred             CCccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---c---cCccEEEcCCCCHHHHHH
Confidence            3445667889999999999999999999999999999999999887776665543   2   467777888888777555


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEec
Q psy9256         116 CFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       116 ~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn  195 (265)
                      +                                                              +    ++.+++|++|||
T Consensus        78 ~--------------------------------------------------------------~----~~~~~id~li~~   91 (249)
T 3f9i_A           78 L--------------------------------------------------------------I----SKTSNLDILVCN   91 (249)
T ss_dssp             H--------------------------------------------------------------H----HTCSCCSEEEEC
T ss_pred             H--------------------------------------------------------------H----HhcCCCCEEEEC
Confidence            5                                                              3    234677888888


Q ss_pred             ccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         196 AGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       196 AG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ||.....++.+.+.++|++.+++|+.|++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus        92 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  160 (249)
T 3f9i_A           92 AGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNPGQANYCASK  160 (249)
T ss_dssp             CC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CCSCSHHHHHHH
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCCCCCchhHHHH
Confidence            8877777777888999999999999999999999999998776 79999999999999999999999987

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.95  E-value=1.7e-27  Score=204.37  Aligned_cols=157  Identities=25%  Similarity=0.404  Sum_probs=110.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++++|+++||||++|||++++++|+++|++|+++ .|+++.++++.+++...+   .++.++.+|++|+++++++     
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~-----   73 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG---INVVVAKGDVKNPEDVENM-----   73 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT---CCEEEEESCTTSHHHHHHH-----
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHH-----
Confidence            3678999999999999999999999999999999 567777776666655432   4677778888887777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+.++++|++|||||....
T Consensus        74 ---------------------------------------------------------~~~~~~~~~~~d~vi~~Ag~~~~   96 (247)
T 2hq1_A           74 ---------------------------------------------------------VKTAMDAFGRIDILVNNAGITRD   96 (247)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECC-----
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCCEEEECCCCCCC
Confidence                                                                     55555556666666666666555


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  159 (247)
T 2hq1_A           97 TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNAGQANYAASK  159 (247)
T ss_dssp             ----------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------CHHHHHHH
T ss_pred             CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcHhHHHH
Confidence            6667788899999999999999999999999998765 69999999999999989999999987

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.95  E-value=1.3e-27  Score=210.22  Aligned_cols=160  Identities=20%  Similarity=0.287  Sum_probs=134.1

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+..+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...   +.++.++.+|++|+++++++   
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~d~~~v~~~---  111 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF---GYESSGYAGDVSKKEEISEV---  111 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT---TCCEEEEECCTTCHHHHHHH---
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc---CCceeEEECCCCCHHHHHHH---
Confidence            345678999999999999999999999999999999998877776666555432   24566777777777777776   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+.++++|++|||||..
T Consensus       112 -----------------------------------------------------------~~~~~~~~~~id~li~~Ag~~  132 (285)
T 2c07_A          112 -----------------------------------------------------------INKILTEHKNVDILVNNAGIT  132 (285)
T ss_dssp             -----------------------------------------------------------HHHHHHHCSCCCEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHhcCCCCEEEECCCCC
Confidence                                                                       666666677777777777776


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.|++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       133 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK  197 (285)
T 2c07_A          133 RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSK  197 (285)
T ss_dssp             CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCCchHHHHH
Confidence            667788889999999999999999999999999998765 69999999999999999999999987

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.95  E-value=2.2e-27  Score=207.25  Aligned_cols=156  Identities=27%  Similarity=0.338  Sum_probs=127.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ++|+++||||++|||+++|++|+++|++|+++ .|+.+.++++.+++.+.+   .++.++.+|++|+++++++       
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~-------   94 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG---GEAVAIPGDVGNAADIAAM-------   94 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHH-------
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHH-------
Confidence            58999999999999999999999999999887 666666766666665543   5777788888888877777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc-c
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-A  202 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~-~  202 (265)
                                                                             ++++.+++|++|++|||||.... .
T Consensus        95 -------------------------------------------------------~~~~~~~~g~id~li~nAg~~~~~~  119 (272)
T 4e3z_A           95 -------------------------------------------------------FSAVDRQFGRLDGLVNNAGIVDYPQ  119 (272)
T ss_dssp             -------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             -------------------------------------------------------HHHHHHhCCCCCEEEECCCCCCCCC
Confidence                                                                   55666666666666666666543 6


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh--cCCceEEEEcccccccCCC-CCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAR--EQGGHLVVTSSIAGIVGAP-YSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~--~~~g~IV~isS~ag~~~~~-~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.|++++++.++|.|.++  +..|+||++||.++..+.+ ++..|++||
T Consensus       120 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  185 (272)
T 4e3z_A          120 RVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASK  185 (272)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHH
T ss_pred             ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHH
Confidence            78889999999999999999999999999999774  2368999999999988776 667899987

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.95  E-value=4.1e-27  Score=202.65  Aligned_cols=158  Identities=28%  Similarity=0.396  Sum_probs=130.8

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+   .++.++.+|++|+++++++    
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~----   78 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDITSEQELSAL----   78 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH----
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC---CceEEEEcCCCCHHHHHHH----
Confidence            345789999999999999999999999999999999999877776666655433   4667777888877777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||...
T Consensus        79 ----------------------------------------------------------~~~~~~~~~~~d~vi~~Ag~~~  100 (255)
T 1fmc_A           79 ----------------------------------------------------------ADFAISKLGKVDILVNNAGGGG  100 (255)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSSCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHhcCCCCEEEECCCCCC
Confidence                                                                      5555556666666677666655


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++ +.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus       101 ~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  163 (255)
T 1fmc_A          101 PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_dssp             CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCCcccHHHH
Confidence            5555 678899999999999999999999999998765 69999999999999888999999987

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=3.6e-27  Score=206.52  Aligned_cols=163  Identities=26%  Similarity=0.387  Sum_probs=133.6

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +|.++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+. +.++.++.+|++|+++++++   
T Consensus        26 ~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~---  101 (279)
T 1xg5_A           26 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-PGTLIPYRCDLSNEEDILSM---  101 (279)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-SSEEEEEECCTTCHHHHHHH---
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCC-CceEEEEEecCCCHHHHHHH---
Confidence            45678999999999999999999999999999999999998777777666654431 24566677777777777776   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+.++++|++|||||..
T Consensus       102 -----------------------------------------------------------~~~~~~~~g~iD~vi~~Ag~~  122 (279)
T 1xg5_A          102 -----------------------------------------------------------FSAIRSQHSGVDICINNAGLA  122 (279)
T ss_dssp             -----------------------------------------------------------HHHHHHHHCCCSEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHhCCCCCEEEECCCCC
Confidence                                                                       666666667777777777776


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-CceEEEEcccccc--cCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ-GGHLVVTSSIAGI--VGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-~g~IV~isS~ag~--~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.+++++++.++|.|.+++. +|+||++||.++.  .+.++...|++||
T Consensus       123 ~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK  191 (279)
T 1xg5_A          123 RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATK  191 (279)
T ss_dssp             CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHHHH
Confidence            6667788899999999999999999999999999987652 3899999999988  5667778899887

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.95  E-value=5.3e-29  Score=223.79  Aligned_cols=174  Identities=13%  Similarity=0.183  Sum_probs=140.2

Q ss_pred             CCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCC---------CcHHHHHHHHHHhCCCCCcEEEEeecCCCh--H
Q psy9256          45 NNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSS---------SNLERVKNLCVQAGAHPQSIYTLTLDVTQT--K  111 (265)
Q Consensus        45 ~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~  111 (265)
                      .+|+++||||++  |||+++|++|+++|++|++++|++         ++++...+.............++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999877654         222222221111122234578899999987  4


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccE
Q psy9256         112 YHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDI  191 (265)
Q Consensus       112 ~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldi  191 (265)
                      ....-                                    ..      .  ...+|++|+++++++++++.+++|++|+
T Consensus        81 ~~~~~------------------------------------~~------~--~~~~Dlsd~~~v~~~~~~~~~~~g~iDi  116 (329)
T 3lt0_A           81 DIDEE------------------------------------TK------N--NKRYNMLQNYTIEDVANLIHQKYGKINM  116 (329)
T ss_dssp             GCCHH------------------------------------HH------T--SHHHHTCCSCSHHHHHHHHHHHHCCEEE
T ss_pred             hhhhh------------------------------------hc------c--cccccccCHHHHHHHHHHHHHhcCCCcE
Confidence            32211                                    00      0  2678999999999999999999999999


Q ss_pred             EEeccccc--ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCC-ccccCC
Q psy9256         192 LINNAGRS--QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSG-SYTDHL  265 (265)
Q Consensus       192 lVnnAG~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~-~Y~asK  265 (265)
                      ||||||+.  ...++.+.+.++|++++++|+.|+++++++++|+|+++   |+||++||.++..+.|+++ +|++||
T Consensus       117 lVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~---g~Iv~isS~~~~~~~~~~~~~Y~asK  190 (329)
T 3lt0_A          117 LVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQ---SSIISLTYHASQKVVPGYGGGMSSAK  190 (329)
T ss_dssp             EEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE---EEEEEEECGGGTSCCTTCTTTHHHHH
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC---CeEEEEeCccccCCCCcchHHHHHHH
Confidence            99999975  46789999999999999999999999999999999763   8999999999999999996 999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.95  E-value=2.6e-27  Score=203.08  Aligned_cols=158  Identities=20%  Similarity=0.326  Sum_probs=132.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+..  +.++.++.+|++|+++++++      
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~------   75 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY--GVKAHGVEMNLLSEESINKA------   75 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--CCCEEEEECCTTCHHHHHHH------
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc--CCceEEEEccCCCHHHHHHH------
Confidence            5789999999999999999999999999999999998877776666554311  23566677777777777766      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+.++++|++|||||.....
T Consensus        76 --------------------------------------------------------~~~~~~~~~~~d~vi~~Ag~~~~~   99 (248)
T 2pnf_A           76 --------------------------------------------------------FEEIYNLVDGIDILVNNAGITRDK   99 (248)
T ss_dssp             --------------------------------------------------------HHHHHHHSSCCSEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHhcCCCCEEEECCCCCCCC
Confidence                                                                    666666777777777777776666


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+.++...|++||
T Consensus       100 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  161 (248)
T 2pnf_A          100 LFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNVGQVNYSTTK  161 (248)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             ccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCCCCchHHHHH
Confidence            778889999999999999999999999999998765 69999999999988888999999887

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.5e-27  Score=206.53  Aligned_cols=166  Identities=20%  Similarity=0.265  Sum_probs=128.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+|++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+...                        
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~------------------------   58 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKE------------------------   58 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC-------------------------------
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccc------------------------
Confidence            35789999999999999999999999999999999998776665544332211000                        


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccc-cEEEecccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCL-DILINNAGRSQ  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~l-dilVnnAG~~~  200 (265)
                                                        .....++..+.+|++|+++++++++++.+++|++ |++|||||...
T Consensus        59 ----------------------------------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~  104 (264)
T 2pd6_A           59 ----------------------------------GPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQ  104 (264)
T ss_dssp             ---------------------------------------CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCC
T ss_pred             ----------------------------------cccCcceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCC
Confidence                                              0001223344455555555555577777777887 88888888877


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.|++++++++.|.|.+++..|+||++||.++..+.++.+.|++||
T Consensus       105 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  169 (264)
T 2pd6_A          105 DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASK  169 (264)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHHHHHHH
T ss_pred             CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChhhHHHH
Confidence            77788899999999999999999999999999998764358999999999999999999999987

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.95  E-value=3e-27  Score=202.40  Aligned_cols=154  Identities=28%  Similarity=0.437  Sum_probs=129.6

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ||+++||||++|||++++++|+++|++|+++ +|+++..+++.+++...+   .++.++.+|++|+++++++        
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~--------   69 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG---GQAITFGGDVSKEADVEAM--------   69 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT---CEEEEEECCTTSHHHHHHH--------
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEeCCCCCHHHHHHH--------
Confidence            6899999999999999999999999999985 787777766666655443   4666777777777777776        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++++.++++++|++|||||.....++
T Consensus        70 ------------------------------------------------------~~~~~~~~g~id~li~~Ag~~~~~~~   95 (244)
T 1edo_A           70 ------------------------------------------------------MKTAIDAWGTIDVVVNNAGITRDTLL   95 (244)
T ss_dssp             ------------------------------------------------------HHHHHHHSSCCSEEEECCCCCCCCCG
T ss_pred             ------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCcCc
Confidence                                                                  66666667777777777777666777


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.+.++|++.+++|+.+++++++.+.|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (244)
T 1edo_A           96 IRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAK  155 (244)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             ccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCCCCCccchhhH
Confidence            8889999999999999999999999999998765 79999999999999999999999987

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.95  E-value=2.9e-27  Score=203.23  Aligned_cols=156  Identities=26%  Similarity=0.343  Sum_probs=125.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.  ...+.++.++.+|++|+++++++        
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~--------   70 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHW--HAYADKVLRVRADVADEGDVNAA--------   70 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHS--TTTGGGEEEEECCTTCHHHHHHH--------
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHH--------
Confidence            36899999999999999999999999999999998776666554431  11134677777777777777777        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc-
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-  203 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~-  203 (265)
                                                                            ++++.++++++|++|||||.....+ 
T Consensus        71 ------------------------------------------------------~~~~~~~~~~id~li~~Ag~~~~~~~   96 (250)
T 2cfc_A           71 ------------------------------------------------------IAATMEQFGAIDVLVNNAGITGNSEA   96 (250)
T ss_dssp             ------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCTTC
T ss_pred             ------------------------------------------------------HHHHHHHhCCCCEEEECCCCCCCCCc
Confidence                                                                  5555555556666666666554444 


Q ss_pred             --ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 --WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 --~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                        +.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           97 GVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             chhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCchhHHHHH
Confidence              77888999999999999999999999999998775 69999999999999989999999987

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.95  E-value=3.9e-27  Score=208.13  Aligned_cols=162  Identities=18%  Similarity=0.261  Sum_probs=135.0

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +..+++||+++||||++|||.+++++|+++|++|++++|+.+.++++.+++.+..  +.++.++.+|++|+++++++   
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~---   94 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT--GNKVHAIQCDVRDPDMVQNT---   94 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHH---
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCceEEEEeCCCCHHHHHHH---
Confidence            3456899999999999999999999999999999999999877777666655431  24577777777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+.++++|++|||||..
T Consensus        95 -----------------------------------------------------------~~~~~~~~g~id~li~~Ag~~  115 (302)
T 1w6u_A           95 -----------------------------------------------------------VSELIKVAGHPNIVINNAAGN  115 (302)
T ss_dssp             -----------------------------------------------------------HHHHHHHTCSCSEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCCC
Confidence                                                                       666666667777777777766


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.+++++++.++|.|.+++..|+||++||.++..+.++...|++||
T Consensus       116 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  181 (302)
T 1w6u_A          116 FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK  181 (302)
T ss_dssp             CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHH
Confidence            666777889999999999999999999999999997544468999999999999999999999987

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.95  E-value=4.1e-27  Score=202.70  Aligned_cols=154  Identities=23%  Similarity=0.302  Sum_probs=128.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcE-EEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI-YTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++   +   .++ .++.+|++|+++++++    
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~~D~~~~~~~~~~----   76 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---G---AAVAARIVADVTDAEAMTAA----   76 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G---GGEEEEEECCTTCHHHHHHH----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---c---ccceeEEEEecCCHHHHHHH----
Confidence            4588999999999999999999999999999999999877666554443   1   345 6677777777777766    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+ ++++|++|||||...
T Consensus        77 ----------------------------------------------------------~~~~~~-~~~id~li~~Ag~~~   97 (254)
T 2wsb_A           77 ----------------------------------------------------------AAEAEA-VAPVSILVNSAGIAR   97 (254)
T ss_dssp             ----------------------------------------------------------HHHHHH-HSCCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHh-hCCCcEEEECCccCC
Confidence                                                                      666655 667777777777766


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCC--CccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS--GSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~--~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.|++++++.++|.|++++ .|+||++||.++..+.|..  +.|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~sK  163 (254)
T 2wsb_A           98 LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNRPQFASSYMASK  163 (254)
T ss_dssp             CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCBHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCCCCcchHHHHHH
Confidence            67778889999999999999999999999999998775 7999999999998888887  8899887

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.94  E-value=2.3e-27  Score=204.54  Aligned_cols=155  Identities=23%  Similarity=0.267  Sum_probs=131.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++||+++||||++|||+++|++|+++|++|+++ +|+.+..++..+++...+   .++.++.+|++|.++++++     
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~-----   75 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG---GSAFSIGANLESLHGVEAL-----   75 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHH-----
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC---CceEEEecCcCCHHHHHHH-----
Confidence            3679999999999999999999999999999886 666777777666665543   5777888888888888777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc------ccccEEEec
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF------GCLDILINN  195 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~------g~ldilVnn  195 (265)
                                                                               ++++.+.+      +++|++|||
T Consensus        76 ---------------------------------------------------------~~~~~~~~~~~~~~~~id~lv~n   98 (255)
T 3icc_A           76 ---------------------------------------------------------YSSLDNELQNRTGSTKFDILINN   98 (255)
T ss_dssp             ---------------------------------------------------------HHHHHHHHHHHHSSSCEEEEEEC
T ss_pred             ---------------------------------------------------------HHHHHHHhcccccCCcccEEEEC
Confidence                                                                     44444333      358888888


Q ss_pred             ccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         196 AGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       196 AG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ||.....++.+.+.++|++++++|+.|++++++.++|.|.+   .|+||++||.++..+.|+.+.|++||
T Consensus        99 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~Y~asK  165 (255)
T 3icc_A           99 AGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLPDFIAYSMTK  165 (255)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC---CCEEEEeCChhhccCCCCcchhHHhH
Confidence            88887788889999999999999999999999999999932   48999999999999999999999987

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.94  E-value=3.7e-27  Score=205.13  Aligned_cols=155  Identities=15%  Similarity=0.199  Sum_probs=124.0

Q ss_pred             cccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..++||+++||||+  +|||+++|++|+++|++|++++|++ ..++..+++.+..   ++..++++|++|+++++++   
T Consensus         5 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~---   77 (265)
T 1qsg_A            5 GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL---GSDIVLQCDVAEDASIDTM---   77 (265)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHH---
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhc---CCcEEEEccCCCHHHHHHH---
Confidence            34789999999999  9999999999999999999999987 4444444433322   1225566777777766666   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|++|||||..
T Consensus        78 -----------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~~   98 (265)
T 1qsg_A           78 -----------------------------------------------------------FAELGKVWPKFDGFVHSIGFA   98 (265)
T ss_dssp             -----------------------------------------------------------HHHHHTTCSSEEEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCCC
Confidence                                                                       666666667777777777765


Q ss_pred             cc----ccccc-cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QR----AAWED-IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~----~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..    .++.+ .+.++|++.+++|+.++++++++++|.|.+   +|+||++||.++..+.|+++.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~sK  166 (265)
T 1qsg_A           99 PGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPNYNVMGLAK  166 (265)
T ss_dssp             CGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhccCCCCchHHHHHH
Confidence            43    56677 889999999999999999999999999963   48999999999999999999999987

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.94  E-value=3.8e-27  Score=204.74  Aligned_cols=155  Identities=22%  Similarity=0.255  Sum_probs=123.3

Q ss_pred             cccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..   +++.++++|++|+++++++   
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~---   76 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL---GGALLFRADVTQDEELDAL---   76 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT---TCCEEEECCTTCHHHHHHH---
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc---CCcEEEECCCCCHHHHHHH---
Confidence            45789999999999  99999999999999999999999875 333333333322   1256677777777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|++|||||..
T Consensus        77 -----------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~~   97 (261)
T 2wyu_A           77 -----------------------------------------------------------FAGVKEAFGGLDYLVHAIAFA   97 (261)
T ss_dssp             -----------------------------------------------------------HHHHHHHHSSEEEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCCCC
Confidence                                                                       555555556666666666654


Q ss_pred             cc----ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QR----AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..    .++.+.+.++|++.+++|+.++++++++++|.|.+   +|+||++||.++..+.++.+.|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK  164 (261)
T 2wyu_A           98 PREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVPKYNVMAIAK  164 (261)
T ss_dssp             CHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEecccccCCCCCchHHHHHH
Confidence            43    56778899999999999999999999999999963   48999999999999999999999987

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.94  E-value=6.2e-27  Score=205.87  Aligned_cols=157  Identities=29%  Similarity=0.423  Sum_probs=128.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..++||+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+  ..++.++.+|++|+++++++     
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~-----   96 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG--AASAHYIAGTMEDMTFAEQF-----   96 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CSEEEEEECCTTCHHHHHHH-----
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CCceEEEeCCCCCHHHHHHH-----
Confidence            45889999999999999999999999999999999999888887777666543  23677788888888887777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEec-ccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN-AGRSQ  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn-AG~~~  200 (265)
                                                                               ++++.+.+|++|++||| ||...
T Consensus        97 ---------------------------------------------------------~~~~~~~~g~iD~li~naag~~~  119 (286)
T 1xu9_A           97 ---------------------------------------------------------VAQAGKLMGGLDMLILNHITNTS  119 (286)
T ss_dssp             ---------------------------------------------------------HHHHHHHHTSCSEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCccCCC
Confidence                                                                     55555555556666666 34332


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                       .+..+.+.++|++.+++|+.|++.++++++|.|.++  .|+||++||.++..+.|+.+.|++||
T Consensus       120 -~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  181 (286)
T 1xu9_A          120 -LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAYSASK  181 (286)
T ss_dssp             -CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             -CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCcccccCCCCccHHHHHH
Confidence             234556889999999999999999999999998765  49999999999999999999999987

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.94  E-value=6.3e-27  Score=202.58  Aligned_cols=161  Identities=24%  Similarity=0.303  Sum_probs=130.1

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+..  +.++.++.+|++|+++++++    
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~----   82 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCDVSNTDIVTKT----   82 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHH----
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc--CCeeEEEEeeCCCHHHHHHH----
Confidence            346889999999999999999999999999999999998776665544443221  24566677777777766666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||...
T Consensus        83 ----------------------------------------------------------~~~~~~~~~~id~li~~Ag~~~  104 (265)
T 1h5q_A           83 ----------------------------------------------------------IQQIDADLGPISGLIANAGVSV  104 (265)
T ss_dssp             ----------------------------------------------------------HHHHHHHSCSEEEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHhcCCCCEEEECCCcCC
Confidence                                                                      6777777777888888888776


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCC-------CCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY-------SGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~-------~~~Y~asK  265 (265)
                      ..++.+.+.++|++.+++|+.++++++++++|.|.+++..|+||++||.++..+.+.       .+.|++||
T Consensus       105 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK  176 (265)
T 1h5q_A          105 VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSK  176 (265)
T ss_dssp             CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHH
T ss_pred             CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccHHHH
Confidence            677888899999999999999999999999999987653599999999988776542       67898887

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.94  E-value=6.3e-27  Score=201.61  Aligned_cols=159  Identities=29%  Similarity=0.407  Sum_probs=131.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .+++||+++||||++|||++++++|+++|++|++++|+ ++.++++.+++...+   .++.++.+|++|+++++++    
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~----   75 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG---GDAAFFAADLATSEACQQL----   75 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHH----
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC---CceEEEECCCCCHHHHHHH----
Confidence            45789999999999999999999999999999999999 788877776665442   4677788888888777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc-c
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR-S  199 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~-~  199 (265)
                                                                                ++++.++++++|++|||||. .
T Consensus        76 ----------------------------------------------------------~~~~~~~~g~id~vi~~Ag~~~   97 (258)
T 3afn_B           76 ----------------------------------------------------------VDEFVAKFGGIDVLINNAGGLV   97 (258)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSSCSEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCEEEECCCCcC
Confidence                                                                      56666666667777777776 4


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc----CCceEEEEccccccc-CCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE----QGGHLVVTSSIAGIV-GAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~----~~g~IV~isS~ag~~-~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.++++++++++|.|.+++    ..++||++||..+.. +.++.+.|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK  168 (258)
T 3afn_B           98 GRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAK  168 (258)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHHHHHH
T ss_pred             CcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHHHHHH
Confidence            556677888999999999999999999999999997542    128999999999988 888889999987

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.94  E-value=2.2e-27  Score=213.27  Aligned_cols=156  Identities=28%  Similarity=0.382  Sum_probs=129.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHh---CCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQA---GAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+.+...   ...+.++.++.+|++|+++++++     
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~-----   75 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA-----   75 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHH-----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHH-----
Confidence            4789999999999999999999999999999998877666555544332   12234566777777777776666     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++  .+|++|+||||||+...
T Consensus        76 ---------------------------------------------------------~~~~--~~g~iD~lVnnAG~~~~   96 (327)
T 1jtv_A           76 ---------------------------------------------------------RERV--TEGRVDVLVCNAGLGLL   96 (327)
T ss_dssp             ---------------------------------------------------------HHTC--TTSCCSEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHH--hcCCCCEEEECCCcCCC
Confidence                                                                     5555  24778888888887766


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++.+.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~aSK  159 (327)
T 1jtv_A           97 GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCASK  159 (327)
T ss_dssp             SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCCCCChHHHHHH
Confidence            7788899999999999999999999999999998765 79999999999999999999999987

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.94  E-value=5.6e-27  Score=199.84  Aligned_cols=151  Identities=30%  Similarity=0.333  Sum_probs=125.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ++|+++||||++|||++++++|+++|++|++++|+++.++++.+++       .++.++.+|++|+++++++        
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~--------   68 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL-------EGALPLPGDVREEGDWARA--------   68 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-------TTCEEEECCTTCHHHHHHH--------
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------hhceEEEecCCCHHHHHHH--------
Confidence            5789999999999999999999999999999999876655443322       1456677777777777766        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++++.+.++++|++|||||.....++
T Consensus        69 ------------------------------------------------------~~~~~~~~~~id~li~~Ag~~~~~~~   94 (234)
T 2ehd_A           69 ------------------------------------------------------VAAMEEAFGELSALVNNAGVGVMKPV   94 (234)
T ss_dssp             ------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCSCG
T ss_pred             ------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCCCCc
Confidence                                                                  66666666777777777777666677


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus        95 ~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  154 (234)
T 2ehd_A           95 HELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPFKGGAAYNASK  154 (234)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCCCCCchhhHHH
Confidence            8889999999999999999999999999998765 69999999999999989999999887

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.94  E-value=5.8e-27  Score=209.92  Aligned_cols=155  Identities=23%  Similarity=0.351  Sum_probs=126.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec---------CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR---------SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (265)
                      .++.||+++||||++|||+++|++|+++|++|++++|         +.+.++++.+++...+   ..   ..+|+++.++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~---~~---~~~D~~~~~~   78 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---GK---AVANYDSVEA   78 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---CE---EEEECCCGGG
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC---Ce---EEEeCCCHHH
Confidence            3578999999999999999999999999999999754         5555555555554332   11   2356666666


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEE
Q psy9256         113 HRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDIL  192 (265)
Q Consensus       113 ~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldil  192 (265)
                      ++++                                                              ++++.+.+|++|+|
T Consensus        79 ~~~~--------------------------------------------------------------~~~~~~~~g~iD~l   96 (319)
T 1gz6_A           79 GEKL--------------------------------------------------------------VKTALDTFGRIDVV   96 (319)
T ss_dssp             HHHH--------------------------------------------------------------HHHHHHHTSCCCEE
T ss_pred             HHHH--------------------------------------------------------------HHHHHHHcCCCCEE
Confidence            5555                                                              67777777777778


Q ss_pred             EecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         193 INNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       193 VnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |||||+....++.+.+.++|++.+++|+.|++++++.++|.|++++ .|+||++||.++..+.+++..|++||
T Consensus        97 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~~~~~~Y~aSK  168 (319)
T 1gz6_A           97 VNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQANYSAAK  168 (319)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCCCHHHHHHH
Confidence            8888777666788899999999999999999999999999998875 79999999999999999999999987

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.94  E-value=1.5e-26  Score=201.68  Aligned_cols=160  Identities=28%  Similarity=0.393  Sum_probs=126.7

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .+...+++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++   .. ..++.++.+|++|+++++++  
T Consensus         9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~~D~~~~~~~~~~--   82 (278)
T 2bgk_A            9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI---GS-PDVISFVHCDVTKDEDVRNL--   82 (278)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CC-TTTEEEEECCTTCHHHHHHH--
T ss_pred             CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHh---CC-CCceEEEECCCCCHHHHHHH--
Confidence            3345688999999999999999999999999999999999876555444333   21 12677777888887777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.++++++|++|||||.
T Consensus        83 ------------------------------------------------------------~~~~~~~~~~id~li~~Ag~  102 (278)
T 2bgk_A           83 ------------------------------------------------------------VDTTIAKHGKLDIMFGNVGV  102 (278)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCCCEEEECCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCcc
Confidence                                                                        55555555666666666665


Q ss_pred             cc--cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC-CCCccccCC
Q psy9256         199 SQ--RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP-YSGSYTDHL  265 (265)
Q Consensus       199 ~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~-~~~~Y~asK  265 (265)
                      ..  ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ .|+||++||.++..+.+ +...|++||
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~Y~~sK  171 (278)
T 2bgk_A          103 LSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATK  171 (278)
T ss_dssp             CCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTSCHHHHHHH
T ss_pred             cCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCCCCCCcchHHHH
Confidence            43  25677888999999999999999999999999998765 79999999999998887 788899887

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.94  E-value=7.6e-27  Score=200.20  Aligned_cols=145  Identities=19%  Similarity=0.285  Sum_probs=121.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||++|||++++++|+++|++|++++|+++.   +.+++   +     +.++++|++| ++++++         
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~-----~~~~~~D~~~-~~~~~~---------   60 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G-----AVPLPTDLEK-DDPKGL---------   60 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T-----CEEEECCTTT-SCHHHH---------
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C-----cEEEecCCch-HHHHHH---------
Confidence            6899999999999999999999999999999998754   22221   1     5567778877 777777         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.+.++++|++|||||.....++.
T Consensus        61 -----------------------------------------------------~~~~~~~~g~id~lv~~Ag~~~~~~~~   87 (239)
T 2ekp_A           61 -----------------------------------------------------VKRALEALGGLHVLVHAAAVNVRKPAL   87 (239)
T ss_dssp             -----------------------------------------------------HHHHHHHHTSCCEEEECCCCCCCCCTT
T ss_pred             -----------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCCChh
Confidence                                                                 566666666777777777766667788


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC--CCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA--PYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~--~~~~~Y~asK  265 (265)
                      +.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||.++..+.  ++.+.|++||
T Consensus        88 ~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sK  148 (239)
T 2ekp_A           88 ELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAK  148 (239)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTSCCHHHHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCCCCCCccHHHHH
Confidence            899999999999999999999999999998775 7999999999999887  8889999987

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1e-26  Score=205.64  Aligned_cols=162  Identities=17%  Similarity=0.281  Sum_probs=131.8

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCC--CCCcEEEEeecCCChHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGA--HPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      ....++||+++||||++|||+++|++|+++|++|++++|+.+.++++.+++.....  .+.++.++.+|++|+++++++ 
T Consensus        12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~-   90 (303)
T 1yxm_A           12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL-   90 (303)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH-
T ss_pred             CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH-
Confidence            34568899999999999999999999999999999999998877777766654211  134566777777777776666 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++++.+++|++|++|||||
T Consensus        91 -------------------------------------------------------------~~~~~~~~g~id~li~~Ag  109 (303)
T 1yxm_A           91 -------------------------------------------------------------VKSTLDTFGKINFLVNNGG  109 (303)
T ss_dssp             -------------------------------------------------------------HHHHHHHHSCCCEEEECCC
T ss_pred             -------------------------------------------------------------HHHHHHHcCCCCEEEECCC
Confidence                                                                         6666666677777777777


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .....++.+.+.++|++.+++|+.|+++++++++|.+.+++ .|+||++||.+ ..+.|+...|++||
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~~~~~~Y~~sK  175 (303)
T 1yxm_A          110 GQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGFPLAVHSGAAR  175 (303)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCCTTCHHHHHHH
T ss_pred             CCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccCCCcchhhHHHH
Confidence            66666778889999999999999999999999999766655 69999999998 77888888999876

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.94  E-value=8.4e-27  Score=199.53  Aligned_cols=154  Identities=26%  Similarity=0.380  Sum_probs=127.6

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEE-EeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYT-LTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +|+++||||++|||++++++|+++|++|+++ +|+++..+++.+++...+   .++.. +.+|++|+++++++       
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~-------   70 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRG---SPLVAVLGANLLEAEAATAL-------   70 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTT---CSCEEEEECCTTSHHHHHHH-------
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEeccCCCHHHHHHH-------
Confidence            4789999999999999999999999999998 888777766666554432   34444 67777777776666       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.+.++++|++|||||.....+
T Consensus        71 -------------------------------------------------------~~~~~~~~~~~d~li~~Ag~~~~~~   95 (245)
T 2ph3_A           71 -------------------------------------------------------VHQAAEVLGGLDTLVNNAGITRDTL   95 (245)
T ss_dssp             -------------------------------------------------------HHHHHHHHTCCCEEEECCCCCCCBC
T ss_pred             -------------------------------------------------------HHHHHHhcCCCCEEEECCCCCCCCC
Confidence                                                                   6666666677777777777766667


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.++..+.++.+.|++||
T Consensus        96 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  156 (245)
T 2ph3_A           96 LVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNPGQANYVASK  156 (245)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCSSBHHHHHHH
T ss_pred             cccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCCCCcchHHHH
Confidence            78889999999999999999999999999998765 69999999999999989999999887

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.94  E-value=9.5e-27  Score=203.09  Aligned_cols=152  Identities=20%  Similarity=0.211  Sum_probs=118.6

Q ss_pred             cccCCcEEEEcCC--CCchhHHHHHHHHHcCCeEEEEecCCCcH-HHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          42 NYFNNKVVWITGA--SSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        42 ~~l~gk~vlItGa--s~GIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ..++||+++||||  ++|||+++|++|+++|++|++++|+++.. +++.++   .   +.++.++++|++|+++++++  
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~~Dv~~~~~v~~~--   74 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---L---PAKAPLLELDVQNEEHLASL--   74 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---S---SSCCCEEECCTTCHHHHHHH--
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---c---CCCceEEEccCCCHHHHHHH--
Confidence            4578999999999  99999999999999999999999987542 332221   1   23566677777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc---cccEEEec
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG---CLDILINN  195 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g---~ldilVnn  195 (265)
                                                                                  ++++.+++|   ++|++|||
T Consensus        75 ------------------------------------------------------------~~~~~~~~g~~~~iD~lv~n   94 (269)
T 2h7i_A           75 ------------------------------------------------------------AGRVTEAIGAGNKLDGVVHS   94 (269)
T ss_dssp             ------------------------------------------------------------HHHHHHHHCTTCCEEEEEEC
T ss_pred             ------------------------------------------------------------HHHHHHHhCCCCCceEEEEC
Confidence                                                                        555555555   55555555


Q ss_pred             ccccc-----cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         196 AGRSQ-----RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       196 AG~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ||...     ..++.+.+.++|++.+++|+.++++++++++|.|.+   +|+||++||.++ .+.+.++.|++||
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~iss~~~-~~~~~~~~Y~asK  165 (269)
T 2h7i_A           95 IGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPS-RAMPAYNWMTVAK  165 (269)
T ss_dssp             CCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCS-SCCTTTHHHHHHH
T ss_pred             CccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCeEEEEcCccc-cccCchHHHHHHH
Confidence            55543     356778899999999999999999999999999964   389999999876 6778888999987

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.94  E-value=1.4e-26  Score=200.35  Aligned_cols=147  Identities=17%  Similarity=0.186  Sum_probs=121.6

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||+++|++|+++|++|++++|+++.++++.+ +...+   .++..+     |+++++++          
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~---~~~~~~-----d~~~v~~~----------   62 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETY---PQLKPM-----SEQEPAEL----------   62 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHC---TTSEEC-----CCCSHHHH----------
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcC---CcEEEE-----CHHHHHHH----------
Confidence            689999999999999999999999999999999888776655 44332   222222     44445555          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-cccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-QRAAWE  205 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-~~~~~~  205 (265)
                                                                          ++++.+++|++|++|||||.. ...++.
T Consensus        63 ----------------------------------------------------~~~~~~~~g~iD~lv~nAg~~~~~~~~~   90 (254)
T 1zmt_A           63 ----------------------------------------------------IEAVTSAYGQVDVLVSNDIFAPEFQPID   90 (254)
T ss_dssp             ----------------------------------------------------HHHHHHHHSCCCEEEEECCCCCCCCCGG
T ss_pred             ----------------------------------------------------HHHHHHHhCCCCEEEECCCcCCCCCChh
Confidence                                                                666666677777777777776 567788


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        91 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  149 (254)
T 1zmt_A           91 KYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSAR  149 (254)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHH
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCCCchHHHHHH
Confidence            899999999999999999999999999998775 79999999999999999999999987

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.94  E-value=6.6e-27  Score=226.44  Aligned_cols=158  Identities=24%  Similarity=0.317  Sum_probs=118.9

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec---------CCCcHHHHHHHHHHhCCCCCcEEEEeecCCC
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR---------SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ  109 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (265)
                      .+..+++||+++||||++|||+++|++|+++|++|++++|         +.+.++++.+++...+   ..   ..+|++|
T Consensus        12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~---~~---~~~D~~d   85 (613)
T 3oml_A           12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG---GE---AVADYNS   85 (613)
T ss_dssp             ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTT---CC---EEECCCC
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC---Ce---EEEEeCC
Confidence            3446789999999999999999999999999999999987         5555665555554432   11   1245555


Q ss_pred             hHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccc
Q psy9256         110 TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  189 (265)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~l  189 (265)
                      .++++++                                                              ++++.+++|++
T Consensus        86 ~~~~~~~--------------------------------------------------------------~~~~~~~~g~i  103 (613)
T 3oml_A           86 VIDGAKV--------------------------------------------------------------IETAIKAFGRV  103 (613)
T ss_dssp             GGGHHHH--------------------------------------------------------------HC---------
T ss_pred             HHHHHHH--------------------------------------------------------------HHHHHHHCCCC
Confidence            5554444                                                              77777788888


Q ss_pred             cEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         190 DILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       190 dilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..+.++++.|++||
T Consensus       104 DiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~~~~~~Y~asK  178 (613)
T 3oml_A          104 DILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGNFGQVNYTAAK  178 (613)
T ss_dssp             -CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCCCChHHHHHH
Confidence            8888888888778889999999999999999999999999999998876 79999999999999999999999987

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.94  E-value=6.3e-27  Score=199.44  Aligned_cols=146  Identities=22%  Similarity=0.238  Sum_probs=123.2

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||+++|++|+++|++|++++|+++.++++.+++      +.++.++.+|++++++++++          
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~----------   65 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL------SNNVGYRARDLASHQEVEQL----------   65 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC------SSCCCEEECCTTCHHHHHHH----------
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH------hhccCeEeecCCCHHHHHHH----------
Confidence            68999999999999999999999999999999887766555432      24566677777777766665          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++++.+.   .|++|||||....+++.+
T Consensus        66 ----------------------------------------------------~~~~~~~---~d~lv~~Ag~~~~~~~~~   90 (230)
T 3guy_A           66 ----------------------------------------------------FEQLDSI---PSTVVHSAGSGYFGLLQE   90 (230)
T ss_dssp             ----------------------------------------------------HHSCSSC---CSEEEECCCCCCCSCGGG
T ss_pred             ----------------------------------------------------HHHHhhc---CCEEEEeCCcCCCCcccc
Confidence                                                                5444332   388999999888888999


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.++|++.+++|+.|++++++.++|.|.+++  ++||++||.++..+.++.+.|++||
T Consensus        91 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asK  147 (230)
T 3guy_A           91 QDPEQIQTLIENNLSSAINVLRELVKRYKDQP--VNVVMIMSTAAQQPKAQESTYCAVK  147 (230)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--CEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEeecccCCCCCCCchhHHHH
Confidence            99999999999999999999999999998764  6999999999999999999999987

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.94  E-value=8.3e-27  Score=200.68  Aligned_cols=145  Identities=19%  Similarity=0.145  Sum_probs=120.5

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-e--cCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLS-A--RSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ||+++||||++|||++++++|+++|++|+++ +  |+++.++++.+++   .  +       .|+.|+++++++      
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~---~--~-------~~~~~~~~v~~~------   62 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN---P--G-------TIALAEQKPERL------   62 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS---T--T-------EEECCCCCGGGH------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh---C--C-------CcccCHHHHHHH------
Confidence            5899999999999999999999999999999 6  8876665544432   0  1       122244444444      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc-
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~-  201 (265)
                                                                              ++++.+++|++|++|||||.... 
T Consensus        63 --------------------------------------------------------~~~~~~~~g~iD~lv~~Ag~~~~~   86 (244)
T 1zmo_A           63 --------------------------------------------------------VDATLQHGEAIDTIVSNDYIPRPM   86 (244)
T ss_dssp             --------------------------------------------------------HHHHGGGSSCEEEEEECCCCCTTG
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCcCCCC
Confidence                                                                    77777788888888888888766 


Q ss_pred             --ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 --AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 --~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                        .++.+.+.++|++++++|+.++++++++++|.|++++ .|+||++||.++..+.|+.+.|++||
T Consensus        87 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  151 (244)
T 1zmo_A           87 NRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPLAYNPLYGPAR  151 (244)
T ss_dssp             GGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTCTTHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCCCCchHHHHHH
Confidence              7888999999999999999999999999999998765 79999999999999999999999987

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.94  E-value=3.7e-26  Score=198.66  Aligned_cols=158  Identities=27%  Similarity=0.393  Sum_probs=130.0

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec-CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR-SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +..++++|+++||||++|||.+++++|+++|++|++++| +++.++++.+++...+   .++.++.+|++|+++++++  
T Consensus        15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~--   89 (274)
T 1ja9_A           15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG---AQGVAIQADISKPSEVVAL--   89 (274)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHH--
T ss_pred             CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHH--
Confidence            345688999999999999999999999999999999999 6666666655554432   4566777777777777777  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++.++++++|++|||||.
T Consensus        90 ------------------------------------------------------------~~~~~~~~~~~d~vi~~Ag~  109 (274)
T 1ja9_A           90 ------------------------------------------------------------FDKAVSHFGGLDFVMSNSGM  109 (274)
T ss_dssp             ------------------------------------------------------------HHHHHHHHSCEEEEECCCCC
T ss_pred             ------------------------------------------------------------HHHHHHHcCCCCEEEECCCC
Confidence                                                                        66666667777777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-cCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-VGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++.+++|+.++++++++++|.|. +  +|+||++||.++. .+.++.+.|++||
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~--~~~iv~~sS~~~~~~~~~~~~~Y~~sK  174 (274)
T 1ja9_A          110 EVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R--GGRIILTSSIAAVMTGIPNHALYAGSK  174 (274)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E--EEEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--CCEEEEEcChHhccCCCCCCchHHHHH
Confidence            6666777889999999999999999999999999997 3  3899999999998 7788889999987

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=3e-26  Score=199.47  Aligned_cols=151  Identities=30%  Similarity=0.417  Sum_probs=119.1

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ++||+++||||++|||++++++|+++|++|++++|+++..+++.+++.+.. .+.++.++.+|++|+++++++       
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~v~~~-------   76 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVADQQQLRDT-------   76 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-CGGGEEEEECCTTSHHHHHHH-------
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc-CCCceEEEecCCCCHHHHHHH-------
Confidence            578999999999999999999999999999999998776665554443211 123566677777777777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.+++|++|++|||||..    
T Consensus        77 -------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~----   97 (267)
T 2gdz_A           77 -------------------------------------------------------FRKVVDHFGRLDILVNNAGVN----   97 (267)
T ss_dssp             -------------------------------------------------------HHHHHHHHSCCCEEEECCCCC----
T ss_pred             -------------------------------------------------------HHHHHHHcCCCCEEEECCCCC----
Confidence                                                                   555555555666666666643    


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc--CCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLARE--QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~--~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                          ++++|++.+++|+.+++++++.++|.|.+++  ..|+||++||.++..+.++.+.|++||
T Consensus        98 ----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (267)
T 2gdz_A           98 ----NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASK  157 (267)
T ss_dssp             ----CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             ----ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHH
Confidence                2467899999999999999999999998753  258999999999999999999999987

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=1.7e-26  Score=197.53  Aligned_cols=144  Identities=16%  Similarity=0.147  Sum_probs=119.2

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |++|+++||||++|||++++++|+++|++|++++|+++..+             .+..++.+|++|+++++++       
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~~~~~-------   60 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSI-------   60 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHH-------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------------cccEEEeCCCCCHHHHHHH-------
Confidence            46899999999999999999999999999999999876532             1244556666666666666       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc--ccccEEEeccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF--GCLDILINNAGRSQR  201 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~--g~ldilVnnAG~~~~  201 (265)
                                                                             ++++.+.+  +++|++|||||....
T Consensus        61 -------------------------------------------------------~~~~~~~~~~g~id~lv~~Ag~~~~   85 (236)
T 1ooe_A           61 -------------------------------------------------------LEQTASSLQGSQVDGVFCVAGGWAG   85 (236)
T ss_dssp             -------------------------------------------------------HHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred             -------------------------------------------------------HHHHHHHhCCCCCCEEEECCcccCC
Confidence                                                                   66666666  577777777776666


Q ss_pred             ccc-cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAW-EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++ .+.+.++|++.+++|+.+++++++.++|.|.+   +|+||++||.++..+.++.+.|++||
T Consensus        86 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~sK  147 (236)
T 1ooe_A           86 GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGPTPSMIGYGMAK  147 (236)
T ss_dssp             BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhccCCCCcHHHHHHH
Confidence            666 67888999999999999999999999999964   48999999999999999999999987

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.93  E-value=4.2e-26  Score=208.26  Aligned_cols=184  Identities=15%  Similarity=0.098  Sum_probs=132.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHH-cCCeEEEEecCCCcHH------------HHHHHHHHhCCCCCcEEEEeecCCC
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLE------------RVKNLCVQAGAHPQSIYTLTLDVTQ  109 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~-~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~~D~~~  109 (265)
                      .-.||++|||||++|||+++|++|++ +|++|++++|+.+..+            .+.+.+.+.   +.++..+.+|++|
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~---G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK---GLYAKSINGDAFS  120 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTTS
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc---CCceEEEECCCCC
Confidence            35799999999999999999999999 9999999998765532            123333333   3578889999999


Q ss_pred             hHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccc
Q psy9256         110 TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  189 (265)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~l  189 (265)
                      +++++++++.+.+++|++|+||||||+..+..+..-.               ...                   ....++
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~---------------~~~-------------------s~~~pi  166 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGE---------------VFN-------------------SALKPI  166 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCC---------------EEE-------------------CCCCCS
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccc---------------ccc-------------------cccccc
Confidence            9999999999999999999999999864221100000               000                   000000


Q ss_pred             c-----EEE-ecccccccccccccchHHHHhhhhhhhhHHH-HHHHHHHH-HhhhhcCCceEEEEcccccccCCCCC--C
Q psy9256         190 D-----ILI-NNAGRSQRAAWEDIELEVDRELFELNVFSVL-SLSRIATS-YFLAREQGGHLVVTSSIAGIVGAPYS--G  259 (265)
Q Consensus       190 d-----ilV-nnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~p-~l~~~~~~g~IV~isS~ag~~~~~~~--~  259 (265)
                      +     --+ .+-+.....++++.++++|++++++|..+++ ++++++.+ .|+++  +|+||++||+++..+.|.+  +
T Consensus       167 g~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~--gG~IVniSSi~~~~~~p~~~~~  244 (405)
T 3zu3_A          167 GNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAE--GAQTTAFTYLGEKITHDIYWNG  244 (405)
T ss_dssp             SSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEE--EEEEEEEECCCCGGGTTTTTTS
T ss_pred             ccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhC--CcEEEEEeCchhhCcCCCccch
Confidence            0     000 0111122234578999999999999999998 78888775 45543  5999999999999999988  9


Q ss_pred             ccccCC
Q psy9256         260 SYTDHL  265 (265)
Q Consensus       260 ~Y~asK  265 (265)
                      +|++||
T Consensus       245 aY~AaK  250 (405)
T 3zu3_A          245 SIGAAK  250 (405)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999987

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.93  E-value=2.3e-26  Score=197.46  Aligned_cols=144  Identities=13%  Similarity=0.087  Sum_probs=119.8

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .++|+++||||++|||++++++|+++|++|++++|+++..+             .+..++++|++|+++++++       
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~v~~~-------   64 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTEQADQV-------   64 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHH-------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------------CCcEEEEcCCCCHHHHHHH-------
Confidence            46899999999999999999999999999999999876532             1244566677776666666       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc--ccccEEEeccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF--GCLDILINNAGRSQR  201 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~--g~ldilVnnAG~~~~  201 (265)
                                                                             ++++.+++  |++|++|||||....
T Consensus        65 -------------------------------------------------------~~~~~~~~~~g~iD~lv~~Ag~~~~   89 (241)
T 1dhr_A           65 -------------------------------------------------------TAEVGKLLGDQKVDAILCVAGGWAG   89 (241)
T ss_dssp             -------------------------------------------------------HHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred             -------------------------------------------------------HHHHHHHhCCCCCCEEEEcccccCC
Confidence                                                                   66666666  577777777777666


Q ss_pred             ccc-cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAW-EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++ .+.+.++|++.+++|+.++++++++++|.|.+   +|+||++||.++..+.++...|++||
T Consensus        90 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK  151 (241)
T 1dhr_A           90 GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTPGMIGYGMAK  151 (241)
T ss_dssp             BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHccCCCCchHHHHHH
Confidence            666 77888999999999999999999999999964   48999999999999999999999987

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.93  E-value=8.1e-26  Score=195.21  Aligned_cols=150  Identities=21%  Similarity=0.242  Sum_probs=116.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh-HHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT-KYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~  120 (265)
                      +++||+++||||++|||+++|++|+++|++ |++++|+++. +. .+++.+... +.++.++.+|++|+ ++++++    
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~-~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~----   74 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TA-LAELKAINP-KVNITFHTYDVTVPVAESKKL----   74 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HH-HHHHHHHCT-TSEEEEEECCTTSCHHHHHHH----
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HH-HHHHHHhCC-CceEEEEEEecCCChHHHHHH----
Confidence            478999999999999999999999999997 9999998742 22 222332221 34667777777776 777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.++++++|++|||||.. 
T Consensus        75 ----------------------------------------------------------~~~~~~~~g~id~lv~~Ag~~-   95 (254)
T 1sby_A           75 ----------------------------------------------------------LKKIFDQLKTVDILINGAGIL-   95 (254)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSCCCEEEECCCCC-
T ss_pred             ----------------------------------------------------------HHHHHHhcCCCCEEEECCccC-
Confidence                                                                      555555555666666666642 


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC--CceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ--GGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~--~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                             +.++|++.+++|+.|+++++++++|.|.+++.  .|+||++||.++..+.++.+.|++||
T Consensus        96 -------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  155 (254)
T 1sby_A           96 -------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASK  155 (254)
T ss_dssp             -------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHH
T ss_pred             -------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHH
Confidence                   35789999999999999999999999977632  48999999999999999999999987

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.93  E-value=6e-26  Score=194.47  Aligned_cols=150  Identities=24%  Similarity=0.365  Sum_probs=124.2

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||++++++|+++|++|++++|+++.++++.++   ..    ...++.+|++|+++++++      
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~----~~~~~~~D~~~~~~~~~~------   70 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE---CP----GIEPVCVDLGDWEATERA------   70 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---ST----TCEEEECCTTCHHHHHHH------
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cC----CCCEEEEeCCCHHHHHHH------
Confidence            57899999999999999999999999999999999987665544332   11    234557777777765555      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++    .++++|++|||||.....
T Consensus        71 --------------------------------------------------------~~----~~~~id~vi~~Ag~~~~~   90 (244)
T 3d3w_A           71 --------------------------------------------------------LG----SVGPVDLLVNNAAVALLQ   90 (244)
T ss_dssp             --------------------------------------------------------HT----TCCCCCEEEECCCCCCCB
T ss_pred             --------------------------------------------------------HH----HcCCCCEEEECCccCCCc
Confidence                                                                    33    456788888888877667


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.+++++++.+.|.|.+++..|+||++||.++..+.++.+.|++||
T Consensus        91 ~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  153 (244)
T 3d3w_A           91 PFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK  153 (244)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHH
Confidence            788889999999999999999999999999998764358999999999999989999999987

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=8.1e-26  Score=193.39  Aligned_cols=154  Identities=25%  Similarity=0.250  Sum_probs=125.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      |++|+++||||++|||++++++|+++|  ++|++++|+.+.++++.+.      .+.++.++.+|++|+++++++     
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~------~~~~~~~~~~D~~~~~~~~~~-----   69 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI------KDSRVHVLPLTVTCDKSLDTF-----   69 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC------CCTTEEEEECCTTCHHHHHHH-----
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc------cCCceEEEEeecCCHHHHHHH-----
Confidence            468999999999999999999999999  9999999988776554321      135677778888888777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc--cccEEEeccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG--CLDILINNAGRS  199 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g--~ldilVnnAG~~  199 (265)
                                                                               ++++.+++|  ++|++|||||..
T Consensus        70 ---------------------------------------------------------~~~~~~~~g~~~id~li~~Ag~~   92 (250)
T 1yo6_A           70 ---------------------------------------------------------VSKVGEIVGSDGLSLLINNAGVL   92 (250)
T ss_dssp             ---------------------------------------------------------HHHHHHHHGGGCCCEEEECCCCC
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCCCcEEEECCccc
Confidence                                                                     555555565  677777777766


Q ss_pred             c-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh------cC----CceEEEEcccccccCC-------CCCCcc
Q psy9256         200 Q-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAR------EQ----GGHLVVTSSIAGIVGA-------PYSGSY  261 (265)
Q Consensus       200 ~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~------~~----~g~IV~isS~ag~~~~-------~~~~~Y  261 (265)
                      . ..++.+.+.++|++.+++|+.+++.++++++|.|.++      +.    .|+||++||.++..+.       ++...|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y  172 (250)
T 1yo6_A           93 LSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAY  172 (250)
T ss_dssp             CCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHH
T ss_pred             CCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcccccccCCccHH
Confidence            5 5677888899999999999999999999999999875      21    5899999999998876       567889


Q ss_pred             ccCC
Q psy9256         262 TDHL  265 (265)
Q Consensus       262 ~asK  265 (265)
                      ++||
T Consensus       173 ~~sK  176 (250)
T 1yo6_A          173 RMSK  176 (250)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9887

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.93  E-value=7.3e-26  Score=195.65  Aligned_cols=146  Identities=13%  Similarity=0.136  Sum_probs=118.9

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +..+.++|+++||||++|||+++|++|+++|++|++++|+++..+               ...+.+|++|+++++++   
T Consensus        16 ~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~d~~d~~~v~~~---   77 (251)
T 3orf_A           16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------------DHSFTIKDSGEEEIKSV---   77 (251)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------------SEEEECSCSSHHHHHHH---
T ss_pred             ccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------ccceEEEeCCHHHHHHH---
Confidence            345567899999999999999999999999999999999876532               12355666666666666   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.++++++|++|||||..
T Consensus        78 -----------------------------------------------------------~~~~~~~~g~iD~li~~Ag~~   98 (251)
T 3orf_A           78 -----------------------------------------------------------IEKINSKSIKVDTFVCAAGGW   98 (251)
T ss_dssp             -----------------------------------------------------------HHHHHTTTCCEEEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCCCEEEECCccC
Confidence                                                                       777777777888888888876


Q ss_pred             cccc-ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAA-WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...+ +.+.+.++|++.+++|+.|+++++++++|.|.+   +|+||++||.++..+.++.+.|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (251)
T 3orf_A           99 SGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALNRTSGMIAYGATK  162 (251)
T ss_dssp             CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             CCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhccCCCCCchhHHHH
Confidence            5554 677889999999999999999999999999964   48999999999999999999999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.93  E-value=9.7e-26  Score=192.98  Aligned_cols=151  Identities=25%  Similarity=0.335  Sum_probs=124.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++++|+++||||++|||++++++|+++|++|++++|+++.+++..++   .    ....++.+|++|+++++++     
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~----~~~~~~~~D~~~~~~~~~~-----   70 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---C----PGIEPVCVDLGDWDATEKA-----   70 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---S----TTCEEEECCTTCHHHHHHH-----
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---c----cCCCcEEecCCCHHHHHHH-----
Confidence            457899999999999999999999999999999999987665544332   1    1344557788877765555     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++    .++++|++|||||....
T Consensus        71 ---------------------------------------------------------~~----~~~~id~vi~~Ag~~~~   89 (244)
T 1cyd_A           71 ---------------------------------------------------------LG----GIGPVDLLVNNAALVIM   89 (244)
T ss_dssp             ---------------------------------------------------------HT----TCCCCSEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HH----HcCCCCEEEECCcccCC
Confidence                                                                     33    45678888888887766


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.+++++++.+.|.|.+++..|+||++||.++..+.++...|++||
T Consensus        90 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  153 (244)
T 1cyd_A           90 QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  153 (244)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHH
Confidence            7788899999999999999999999999999998764358999999999999989999999987

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.93  E-value=2.5e-26  Score=194.95  Aligned_cols=133  Identities=22%  Similarity=0.309  Sum_probs=113.8

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |.++++|+++||||++|||+++|++|+++|++|++++|+.+                       +|++|+++++++    
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------------~D~~~~~~v~~~----   53 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------------LDISDEKSVYHY----   53 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------------CCTTCHHHHHHH----
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------------cCCCCHHHHHHH----
Confidence            35678999999999999999999999999999999998753                       688888776666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-  199 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-  199 (265)
                                                                                +++    ++++|++|||||.. 
T Consensus        54 ----------------------------------------------------------~~~----~g~id~lv~nAg~~~   71 (223)
T 3uce_A           54 ----------------------------------------------------------FET----IGAFDHLIVTAGSYA   71 (223)
T ss_dssp             ----------------------------------------------------------HHH----HCSEEEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHH----hCCCCEEEECCCCCC
Confidence                                                                      433    36778888888876 


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..+++.+.+.++|++.+++|+.++++++++++|.|++   +|+||++||.++..+.++.+.|++||
T Consensus        72 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~Y~asK  134 (223)
T 3uce_A           72 PAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSRKVVANTYVKAAIN  134 (223)
T ss_dssp             CCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhccCCCCchHHHHHH
Confidence            5577889999999999999999999999999999964   48999999999999999999999987

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.93  E-value=3.5e-26  Score=196.62  Aligned_cols=142  Identities=20%  Similarity=0.220  Sum_probs=120.3

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHH-cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .++|+++||||++|||+++|++|++ .|++|++.+|+++..             ..++.++++|++|+++++++      
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~------   62 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------------AENLKFIKADLTKQQDITNV------   62 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------------CTTEEEEECCTTCHHHHHHH------
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------------cccceEEecCcCCHHHHHHH------
Confidence            3689999999999999999999999 789999998876521             13456777788777777766      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++.+ + ++++|++|||||.....
T Consensus        63 --------------------------------------------------------~~~~-~-~~~id~lv~nAg~~~~~   84 (244)
T 4e4y_A           63 --------------------------------------------------------LDII-K-NVSFDGIFLNAGILIKG   84 (244)
T ss_dssp             --------------------------------------------------------HHHT-T-TCCEEEEEECCCCCCCB
T ss_pred             --------------------------------------------------------HHHH-H-hCCCCEEEECCccCCCC
Confidence                                                                    5333 2 56788888888887778


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++++++|.|.++   |+||++||.++..+.|+.+.|++||
T Consensus        85 ~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---g~iv~~sS~~~~~~~~~~~~Y~asK  144 (244)
T 4e4y_A           85 SIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG---ASIVFNGSDQCFIAKPNSFAYTLSK  144 (244)
T ss_dssp             CTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE---EEEEEECCGGGTCCCTTBHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC---cEEEEECCHHHccCCCCCchhHHHH
Confidence            88999999999999999999999999999999653   8999999999999999999999987

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.93  E-value=2.4e-25  Score=193.11  Aligned_cols=161  Identities=17%  Similarity=0.191  Sum_probs=125.2

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcC---CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCG---AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRR  115 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (265)
                      ++..++++|+++||||++|||++++++|+++|   ++|++++|+.+..+.+.+. .+.+   .++.++.+|++|++++++
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l-~~~~---~~~~~~~~Dl~~~~~v~~   89 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL-AKNH---SNIHILEIDLRNFDAYDK   89 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHH-HHHC---TTEEEEECCTTCGGGHHH
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHh-hccC---CceEEEEecCCChHHHHH
Confidence            44567889999999999999999999999999   9999999998876654332 2222   467777778877777777


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc--cccEEE
Q psy9256         116 CFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG--CLDILI  193 (265)
Q Consensus       116 ~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g--~ldilV  193 (265)
                      +                                                              ++++.+.++  ++|++|
T Consensus        90 ~--------------------------------------------------------------~~~~~~~~g~~~id~li  107 (267)
T 1sny_A           90 L--------------------------------------------------------------VADIEGVTKDQGLNVLF  107 (267)
T ss_dssp             H--------------------------------------------------------------HHHHHHHHGGGCCSEEE
T ss_pred             H--------------------------------------------------------------HHHHHHhcCCCCccEEE
Confidence            7                                                              555655565  577777


Q ss_pred             ecccccc-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh------cC----CceEEEEcccccccCCC---CCC
Q psy9256         194 NNAGRSQ-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAR------EQ----GGHLVVTSSIAGIVGAP---YSG  259 (265)
Q Consensus       194 nnAG~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~------~~----~g~IV~isS~ag~~~~~---~~~  259 (265)
                      ||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.++      +.    .|+||++||.++..+.+   +..
T Consensus       108 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  187 (267)
T 1sny_A          108 NNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMY  187 (267)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCH
T ss_pred             ECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCCCCCch
Confidence            7777665 5677888899999999999999999999999999876      21    48999999999988753   667


Q ss_pred             ccccCC
Q psy9256         260 SYTDHL  265 (265)
Q Consensus       260 ~Y~asK  265 (265)
                      .|++||
T Consensus       188 ~Y~~sK  193 (267)
T 1sny_A          188 AYRTSK  193 (267)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            899887

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.93  E-value=1e-25  Score=210.88  Aligned_cols=154  Identities=27%  Similarity=0.357  Sum_probs=126.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .++||+++||||++|||+++|++|+++|++|++++|+.. .+++.+...+.+     ..++.||++|+++++++      
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~~-----~~~~~~Dvtd~~~v~~~------  277 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKVG-----GTALTLDVTADDAVDKI------  277 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHHT-----CEEEECCTTSTTHHHHH------
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHcC-----CeEEEEecCCHHHHHHH------
Confidence            468999999999999999999999999999999998643 233333333221     23455566555555555      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccc-ccEEEeccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGC-LDILINNAGRSQR  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~-ldilVnnAG~~~~  201 (265)
                                                                              ++++.+++++ +|++|||||+...
T Consensus       278 --------------------------------------------------------~~~~~~~~g~~id~lV~nAGv~~~  301 (454)
T 3u0b_A          278 --------------------------------------------------------TAHVTEHHGGKVDILVNNAGITRD  301 (454)
T ss_dssp             --------------------------------------------------------HHHHHHHSTTCCSEEEECCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHcCCCceEEEECCcccCC
Confidence                                                                    7777777765 8888888888878


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++.+++.++|++++++|+.|++++++.+.|.|.+++ .|+||++||+++..+.++++.|++||
T Consensus       302 ~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~~g~~~YaasK  364 (454)
T 3u0b_A          302 KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGNRGQTNYATTK  364 (454)
T ss_dssp             CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCCCCCHHHHHHH
Confidence            8889999999999999999999999999999998765 79999999999999999999999987

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.93  E-value=5.1e-26  Score=203.20  Aligned_cols=168  Identities=18%  Similarity=0.187  Sum_probs=112.0

Q ss_pred             ccCCcEEEEcCC--CCchhHHHHHHHHHcCCeEEEEecCC-----------CcHHHH-----------HHHHHHhCCCCC
Q psy9256          43 YFNNKVVWITGA--SSGIGEALALQLSKCGAKLVLSARSS-----------SNLERV-----------KNLCVQAGAHPQ   98 (265)
Q Consensus        43 ~l~gk~vlItGa--s~GIG~aia~~l~~~G~~V~~~~r~~-----------~~~~~~-----------~~~~~~~~~~~~   98 (265)
                      +|+||+++||||  ++|||+++|++|+++|++|++++|++           +.+++.           .+++.+.+....
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            478999999999  89999999999999999999998752           111111           000000000000


Q ss_pred             cEEEEeec--CCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccC-----
Q psy9256          99 SIYTLTLD--VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQ-----  171 (265)
Q Consensus        99 ~~~~~~~D--~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~-----  171 (265)
                      ...++.+|  +++++                                                    .+.||++|     
T Consensus        86 ~~~~~~~d~~~~~~~----------------------------------------------------~~~~Dv~~~~~~~  113 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQ----------------------------------------------------DVPPEVSSNKRYA  113 (319)
T ss_dssp             CSEEEECCTTCCSGG----------------------------------------------------GSCHHHHCC--CT
T ss_pred             ccccccccccccccc----------------------------------------------------cccchhccccccc
Confidence            01122222  11211                                                    14567776     


Q ss_pred             ---hhHHHHHHHHHHhhcccccEEEecccccc--cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEE
Q psy9256         172 ---TKYHRRCFDAVIQQFGCLDILINNAGRSQ--RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVT  246 (265)
Q Consensus       172 ---~~~v~~~~~~i~~~~g~ldilVnnAG~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~i  246 (265)
                         +++++++++++.+++|++|+||||||...  ..++.+.+.++|++++++|+.|+++++++++|+|.+   +|+||++
T Consensus       114 ~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~Iv~i  190 (319)
T 2ptg_A          114 GVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE---GGSALAL  190 (319)
T ss_dssp             TSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEE
T ss_pred             ccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc---CceEEEE
Confidence               67899999999999999999999999763  577889999999999999999999999999999964   3899999


Q ss_pred             cccccccCCCCC-CccccCC
Q psy9256         247 SSIAGIVGAPYS-GSYTDHL  265 (265)
Q Consensus       247 sS~ag~~~~~~~-~~Y~asK  265 (265)
                      ||.++..+.|++ +.|++||
T Consensus       191 sS~~~~~~~~~~~~~Y~asK  210 (319)
T 2ptg_A          191 SYIASEKVIPGYGGGMSSAK  210 (319)
T ss_dssp             EECC----------------
T ss_pred             eccccccccCccchhhHHHH
Confidence            999999998887 7999998

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.93  E-value=5.1e-26  Score=209.25  Aligned_cols=183  Identities=14%  Similarity=0.065  Sum_probs=130.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHH-cCCeEEEEecCCCcHHH------------HHHHHHHhCCCCCcEEEEeecCCChH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLER------------VKNLCVQAGAHPQSIYTLTLDVTQTK  111 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~-~G~~V~~~~r~~~~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~  111 (265)
                      .||++|||||++|||+++|++|++ +|++|++++|+.+..++            +.+++.+.   +.++..+.+|++|++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~---G~~a~~i~~Dvtd~~  136 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA---GLYSKSINGDAFSDA  136 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTTSHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc---CCcEEEEEecCCCHH
Confidence            599999999999999999999999 99999999998765432            22344443   367888999999999


Q ss_pred             HHHHHHHHHHHHh-CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccccc
Q psy9256         112 YHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  190 (265)
Q Consensus       112 ~~~~~~~~~~~~~-g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ld  190 (265)
                      +++++++.+.+++ |++|+||||||+..+..+..-.               .  +.                 ...+++.
T Consensus       137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~---------------~--~~-----------------~~~~p~~  182 (422)
T 3s8m_A          137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGE---------------V--KR-----------------SALKPIG  182 (422)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCC---------------E--EE-----------------CCCCCSS
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEcCcccccccccccc---------------c--cc-----------------ccccccc
Confidence            9999999999999 8999999999853211000000               0  00                 0000000


Q ss_pred             ------EEEecccccccccccccchHHHHhhhhhhhhHHH-HHHHHHHHHhhhhcCCceEEEEcccccccCCCCC--Ccc
Q psy9256         191 ------ILINNAGRSQRAAWEDIELEVDRELFELNVFSVL-SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS--GSY  261 (265)
Q Consensus       191 ------ilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~--~~Y  261 (265)
                            .+=.+........+++.++++|++++++|..+++ ++++.+.+.+..++ +|+||++||+++..+.|++  ++|
T Consensus       183 ~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~-gG~IVniSSi~g~~~~p~~~~~aY  261 (422)
T 3s8m_A          183 QTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLAD-GARSVAFSYIGTEITWPIYWHGAL  261 (422)
T ss_dssp             SCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE-EEEEEEEEECCCGGGHHHHTSHHH
T ss_pred             ccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhC-CCEEEEEeCchhhccCCCccchHH
Confidence                  0000111111223457899999999999999997 88888876433333 5999999999999988876  899


Q ss_pred             ccCC
Q psy9256         262 TDHL  265 (265)
Q Consensus       262 ~asK  265 (265)
                      ++||
T Consensus       262 ~ASK  265 (422)
T 3s8m_A          262 GKAK  265 (422)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9998

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.92  E-value=1e-26  Score=199.90  Aligned_cols=149  Identities=19%  Similarity=0.225  Sum_probs=104.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||+++||||++|||+++|++|++ |++|++++|+++.++++.+        ..++.++.+|+++.++ ...      
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~--------~~~~~~~~~D~~~~~~-~~~------   65 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE--------IEGVEPIESDIVKEVL-EEG------   65 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT--------STTEEEEECCHHHHHH-TSS------
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh--------hcCCcceecccchHHH-HHH------
Confidence            46799999999999999999999988 9999999998766554432        1357777888777654 222      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              +.+..+.++++|++|||||.....
T Consensus        66 --------------------------------------------------------~~~~~~~~~~id~lv~~Ag~~~~~   89 (245)
T 3e9n_A           66 --------------------------------------------------------GVDKLKNLDHVDTLVHAAAVARDT   89 (245)
T ss_dssp             --------------------------------------------------------SCGGGTTCSCCSEEEECC------
T ss_pred             --------------------------------------------------------HHHHHHhcCCCCEEEECCCcCCCC
Confidence                                                                    233445678899999999988888


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.|++++++.++|.|++++  |+||++||.++..+.++.+.|++||
T Consensus        90 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK  150 (245)
T 3e9n_A           90 TIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPHPGNTIYAASK  150 (245)
T ss_dssp             ----CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC----------CHHHHHHH
T ss_pred             chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCCCCchHHHHHH
Confidence            888999999999999999999999999999997764  9999999999999999999999987

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.92  E-value=3.9e-26  Score=203.76  Aligned_cols=169  Identities=18%  Similarity=0.179  Sum_probs=128.4

Q ss_pred             cccCCcEEEEcCC--CCchhHHHHHHHHHcCCeEEEEecCCCc------HHH-HHHHHHHhCCCC--CcEEEEeecC--C
Q psy9256          42 NYFNNKVVWITGA--SSGIGEALALQLSKCGAKLVLSARSSSN------LER-VKNLCVQAGAHP--QSIYTLTLDV--T  108 (265)
Q Consensus        42 ~~l~gk~vlItGa--s~GIG~aia~~l~~~G~~V~~~~r~~~~------~~~-~~~~~~~~~~~~--~~~~~~~~D~--~  108 (265)
                      .+|+||+++||||  ++|||+++|++|+++|++|++++|++..      .++ ..+...+.....  ....++.+|+  +
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            3578999999999  8999999999999999999999876310      000 000111111000  0012333432  2


Q ss_pred             ChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccC--------hhHHHHHHH
Q psy9256         109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQ--------TKYHRRCFD  180 (265)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~--------~~~v~~~~~  180 (265)
                      +.+                                                    .+.||++|        +++++++++
T Consensus        85 ~~~----------------------------------------------------~~~~Dv~~~~~~~~~d~~~v~~~~~  112 (315)
T 2o2s_A           85 KPE----------------------------------------------------DVPQDIKDNKRYAGVDGYTIKEVAV  112 (315)
T ss_dssp             STT----------------------------------------------------SSCHHHHTCGGGSSCCCCSHHHHHH
T ss_pred             ccc----------------------------------------------------hhhhhhhcccccccCCHHHHHHHHH
Confidence            221                                                    13456664        778999999


Q ss_pred             HHHhhcccccEEEecccccc--cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCC
Q psy9256         181 AVIQQFGCLDILINNAGRSQ--RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS  258 (265)
Q Consensus       181 ~i~~~~g~ldilVnnAG~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~  258 (265)
                      ++.+++|++|+||||||...  ..++.+.+.++|++++++|+.|+++++++++|+|.+   +|+||++||.++..+.|++
T Consensus       113 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~  189 (315)
T 2o2s_A          113 KVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE---GGSAVTLSYLAAERVVPGY  189 (315)
T ss_dssp             HHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE---EEEEEEEEEGGGTSCCTTC
T ss_pred             HHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc---CCEEEEEecccccccCCCc
Confidence            99999999999999999763  577889999999999999999999999999999964   3899999999999998887


Q ss_pred             -CccccCC
Q psy9256         259 -GSYTDHL  265 (265)
Q Consensus       259 -~~Y~asK  265 (265)
                       +.|++||
T Consensus       190 ~~~Y~asK  197 (315)
T 2o2s_A          190 GGGMSSAK  197 (315)
T ss_dssp             CTTHHHHH
T ss_pred             cHHHHHHH
Confidence             5899987

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.92  E-value=5.1e-26  Score=200.61  Aligned_cols=148  Identities=25%  Similarity=0.298  Sum_probs=119.6

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .++++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++      +.++.++.+|++|+++++++  
T Consensus         9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~v~~~--   80 (291)
T 3rd5_A            9 ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM------AGQVEVRELDLQDLSSVRRF--   80 (291)
T ss_dssp             GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS------SSEEEEEECCTTCHHHHHHH--
T ss_pred             hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------cCCeeEEEcCCCCHHHHHHH--
Confidence            4667899999999999999999999999999999999999887766554432      35778888888888877666  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++    +++|++|||||+
T Consensus        81 ------------------------------------------------------------~~~~----~~iD~lv~nAg~   96 (291)
T 3rd5_A           81 ------------------------------------------------------------ADGV----SGADVLINNAGI   96 (291)
T ss_dssp             ------------------------------------------------------------HHTC----CCEEEEEECCCC
T ss_pred             ------------------------------------------------------------HHhc----CCCCEEEECCcC
Confidence                                                                        3332    567777777776


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC-------------CCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG-------------APYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~-------------~~~~~~Y~asK  265 (265)
                      ..  +..+.+.++|++++++|+.|+++++++++|.|.     ++||++||.++..+             .++...|++||
T Consensus        97 ~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-----~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  169 (291)
T 3rd5_A           97 MA--VPYALTVDGFESQIGTNHLGHFALTNLLLPRLT-----DRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSK  169 (291)
T ss_dssp             CS--CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE-----EEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHH
T ss_pred             CC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hheeEeechhhccCCCCcccccccccCCCCcchHHHHH
Confidence            53  235677889999999999999999999999985     38999999998865             34456799887

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.92  E-value=2.7e-25  Score=191.95  Aligned_cols=146  Identities=23%  Similarity=0.248  Sum_probs=118.2

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .+..+++||+++||||++|||+++|++|+++|++|++++|+++..       .+.    .+..++ +|+  .++++++  
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-------~~~----~~~~~~-~D~--~~~~~~~--   75 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL-------KRS----GHRYVV-CDL--RKDLDLL--   75 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHT----CSEEEE-CCT--TTCHHHH--
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-------Hhh----CCeEEE-eeH--HHHHHHH--
Confidence            345678999999999999999999999999999999999976221       111    145556 787  3344444  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++++    .++|++|||||.
T Consensus        76 ------------------------------------------------------------~~~~----~~iD~lv~~Ag~   91 (249)
T 1o5i_A           76 ------------------------------------------------------------FEKV----KEVDILVLNAGG   91 (249)
T ss_dssp             ------------------------------------------------------------HHHS----CCCSEEEECCCC
T ss_pred             ------------------------------------------------------------HHHh----cCCCEEEECCCC
Confidence                                                                        3332    378888888888


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||.++..+.++.+.|++||
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (249)
T 1o5i_A           92 PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSAR  157 (249)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCCCCchHHHHH
Confidence            7777888999999999999999999999999999998875 69999999999999999999999987

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.92  E-value=2.7e-25  Score=196.37  Aligned_cols=166  Identities=18%  Similarity=0.206  Sum_probs=125.4

Q ss_pred             ccCCcEEEEcCCC--CchhHHHHHHHHHcCCeEEEEecCCC-----------cHHHHHHHHHHhCCCC--CcEEEEeecC
Q psy9256          43 YFNNKVVWITGAS--SGIGEALALQLSKCGAKLVLSARSSS-----------NLERVKNLCVQAGAHP--QSIYTLTLDV  107 (265)
Q Consensus        43 ~l~gk~vlItGas--~GIG~aia~~l~~~G~~V~~~~r~~~-----------~~~~~~~~~~~~~~~~--~~~~~~~~D~  107 (265)
                      +|+||+++||||+  +|||+++|++|+++|++|++++|++.           .++++ +   +.....  .....+++|+
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-R---VLPDGSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-G---BCTTSSBCCEEEEEEECT
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-h---hhccccccccccccccce
Confidence            5789999999999  99999999999999999999987531           11111 0   000000  0022333332


Q ss_pred             CChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeecccc--------ChhHHHHHH
Q psy9256         108 TQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVT--------QTKYHRRCF  179 (265)
Q Consensus       108 ~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~--------~~~~v~~~~  179 (265)
                      .-.                                                  ....+.+|++        +++++++++
T Consensus        81 ~~~--------------------------------------------------~~~dv~~Dv~~~~~~~~~~~~~v~~~~  110 (297)
T 1d7o_A           81 VFD--------------------------------------------------NPEDVPEDVKANKRYAGSSNWTVQEAA  110 (297)
T ss_dssp             TCC--------------------------------------------------SGGGSCHHHHTSHHHHHCCCCSHHHHH
T ss_pred             ecc--------------------------------------------------chhhhhhhhhccccccccCHHHHHHHH
Confidence            100                                                  0000223333        478899999


Q ss_pred             HHHHhhcccccEEEecccccc--cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCC
Q psy9256         180 DAVIQQFGCLDILINNAGRSQ--RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY  257 (265)
Q Consensus       180 ~~i~~~~g~ldilVnnAG~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~  257 (265)
                      +++.+++|++|+||||||+..  ..++.+.+.++|++++++|+.|+++++++++|+|.+   +|+||++||.++..+.|+
T Consensus       111 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~  187 (297)
T 1d7o_A          111 ECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP---GGASISLTYIASERIIPG  187 (297)
T ss_dssp             HHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSCCTT
T ss_pred             HHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc---CceEEEEeccccccCCCC
Confidence            999999999999999999754  567889999999999999999999999999999964   389999999999999888


Q ss_pred             C-CccccCC
Q psy9256         258 S-GSYTDHL  265 (265)
Q Consensus       258 ~-~~Y~asK  265 (265)
                      + +.|++||
T Consensus       188 ~~~~Y~asK  196 (297)
T 1d7o_A          188 YGGGMSSAK  196 (297)
T ss_dssp             CTTTHHHHH
T ss_pred             cchHHHHHH
Confidence            7 6999987

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.92  E-value=6.9e-25  Score=208.63  Aligned_cols=155  Identities=21%  Similarity=0.213  Sum_probs=124.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEE-ecCCCc-------------HHHHHHHHHHhCCCCCcEEEEeecCCC
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAK-LVLS-ARSSSN-------------LERVKNLCVQAGAHPQSIYTLTLDVTQ  109 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~-~r~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (265)
                      ++++++||||++|||+++|++|+++|++ |+++ +|+...             ++++.+++...                
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------  313 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL----------------  313 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH----------------
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc----------------
Confidence            6899999999999999999999999998 7777 888532             22222222222                


Q ss_pred             hHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccc
Q psy9256         110 TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  189 (265)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~l  189 (265)
                                                                       ..++..+.||++|+++++++++++. +++++
T Consensus       314 -------------------------------------------------g~~v~~~~~Dvtd~~~v~~~~~~i~-~~g~i  343 (525)
T 3qp9_A          314 -------------------------------------------------GATATVVTCDLTDAEAAARLLAGVS-DAHPL  343 (525)
T ss_dssp             -------------------------------------------------TCEEEEEECCTTSHHHHHHHHHTSC-TTSCE
T ss_pred             -------------------------------------------------CCEEEEEECCCCCHHHHHHHHHHHH-hcCCC
Confidence                                                             2345555666666666666688887 78899


Q ss_pred             cEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         190 DILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       190 dilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |++|||||+...+++.+.+.++|++++++|+.|++++.+.+.|.|++++..++||++||+++..+.++++.|+++|
T Consensus       344 d~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaaaK  419 (525)
T 3qp9_A          344 SAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQGAYAAGT  419 (525)
T ss_dssp             EEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTTCHHHHHHH
T ss_pred             cEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCCCHHHHHHH
Confidence            9999999998888999999999999999999999999999999997764358999999999999999999999987

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.91  E-value=2.2e-24  Score=186.87  Aligned_cols=142  Identities=24%  Similarity=0.261  Sum_probs=110.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHH-cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++|+++||||++|||++++++|++ .|++|++++|+.+..+++.+++...+   .++.++.+|++|+++++++      
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~------   72 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDIDDLQSIRAL------   72 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTCHHHHHHH------
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCCCHHHHHHH------
Confidence            4689999999999999999999999 99999999999877777766665442   4567778888888777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.++++++|++|||||.....
T Consensus        73 --------------------------------------------------------~~~~~~~~g~id~li~~Ag~~~~~   96 (276)
T 1wma_A           73 --------------------------------------------------------RDFLRKEYGGLDVLVNNAGIAFKV   96 (276)
T ss_dssp             --------------------------------------------------------HHHHHHHHSSEEEEEECCCCCCCT
T ss_pred             --------------------------------------------------------HHHHHHhcCCCCEEEECCcccccC
Confidence                                                                    555555555566666666654333


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      .......++|++.+++|+.|++++++.++|.|.+   .|+||++||.++..
T Consensus        97 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~  144 (276)
T 1wma_A           97 ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVR  144 (276)
T ss_dssp             TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHH
T ss_pred             CCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhc
Confidence            2222225889999999999999999999999864   38999999988764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.91  E-value=5.6e-24  Score=196.51  Aligned_cols=184  Identities=13%  Similarity=0.043  Sum_probs=133.4

Q ss_pred             cCCcEEEEcCCCCchhHH--HHHHHHHcCCeEEEEecCCCc------------HHHHHHHHHHhCCCCCcEEEEeecCCC
Q psy9256          44 FNNKVVWITGASSGIGEA--LALQLSKCGAKLVLSARSSSN------------LERVKNLCVQAGAHPQSIYTLTLDVTQ  109 (265)
Q Consensus        44 l~gk~vlItGas~GIG~a--ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (265)
                      ..||+++||||++|||++  ++++|+++|++|++++|+.+.            .+.+.+...+.   +.++..+.+|++|
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~Dvtd  134 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK---GLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc---CCcEEEEEeeCCC
Confidence            689999999999999999  999999999999999997654            23344444443   3678899999999


Q ss_pred             hHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccc
Q psy9256         110 TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  189 (265)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~l  189 (265)
                      +++++++++.+.+.+|++|+||||||+..+..+..-.               .  +.                 ....++
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~---------------~--~~-----------------s~~~p~  180 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGN---------------V--YT-----------------SRIKTI  180 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCC---------------E--EE-----------------CCCCBS
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcccccccccccc---------------c--cc-----------------cccccc
Confidence            9999999999999999999999999964322111000               0  00                 000000


Q ss_pred             c----E--EEecccccccccccccchHHHHhhhhhhhhHHH-HHHHHHHHHhhhhcCCceEEEEcccccccCCCCC--Cc
Q psy9256         190 D----I--LINNAGRSQRAAWEDIELEVDRELFELNVFSVL-SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS--GS  260 (265)
Q Consensus       190 d----i--lVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~-~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~--~~  260 (265)
                      .    .  +-..........+++.++++|++.+++|..+.+ ++++.+.+.+..++ +|+||++||+++..+.|.+  ++
T Consensus       181 ~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~~~~p~~~~~a  259 (418)
T 4eue_A          181 LGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSD-KATTIAYSYIGSPRTYKIYREGT  259 (418)
T ss_dssp             SSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCGGGTTTTTTSH
T ss_pred             ccccccccccccccccccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhcCCCCccccHH
Confidence            0    0  000011111234567899999999999999998 77888777544443 5999999999999999988  99


Q ss_pred             cccCC
Q psy9256         261 YTDHL  265 (265)
Q Consensus       261 Y~asK  265 (265)
                      |++||
T Consensus       260 Y~ASK  264 (418)
T 4eue_A          260 IGIAK  264 (418)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99987

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.91  E-value=2.4e-24  Score=219.40  Aligned_cols=165  Identities=21%  Similarity=0.286  Sum_probs=130.5

Q ss_pred             HhhhhccccCCcEEEEcCCCCc-hhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHH-hCCCCCcEEEEeecCCChHH
Q psy9256          36 KINKRLNYFNNKVVWITGASSG-IGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQ-AGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        36 ~~~~~~~~l~gk~vlItGas~G-IG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~  112 (265)
                      .......+++||+++||||++| ||+++|++|+++|++|+++ +|+.+.++++.+++.+ ....+.++.++++|++|+++
T Consensus       466 ~~a~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~es  545 (1688)
T 2pff_A          466 XXXXXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQD  545 (1688)
T ss_dssp             TTSSSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTH
T ss_pred             cccccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHH
Confidence            3344445689999999999998 9999999999999999998 5777666665554422 22223456666677776666


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhh-----cc
Q psy9256         113 HRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQ-----FG  187 (265)
Q Consensus       113 ~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~-----~g  187 (265)
                      ++++                                                              ++++.+.     +|
T Consensus       546 VeaL--------------------------------------------------------------Ve~I~e~~~~~GfG  563 (1688)
T 2pff_A          546 VEAL--------------------------------------------------------------IEFIYDTEKNGGLG  563 (1688)
T ss_dssp             HHHH--------------------------------------------------------------HHHHHSCTTSSSCC
T ss_pred             HHHH--------------------------------------------------------------HHHHHHhccccccC
Confidence            6666                                                              7777766     66


Q ss_pred             -cccEEEecccccccc-cccccc--hHHHHhhhhhhhhHHHHHHHHH--HHHhhhhcCCceEEEEcccccccCCCCCCcc
Q psy9256         188 -CLDILINNAGRSQRA-AWEDIE--LEVDRELFELNVFSVLSLSRIA--TSYFLAREQGGHLVVTSSIAGIVGAPYSGSY  261 (265)
Q Consensus       188 -~ldilVnnAG~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y  261 (265)
                       ++|+||||||+...+ ++.+.+  .++|++++++|+.+++.+++.+  .|.|.+++ .|+||++||.++..+  +.++|
T Consensus       564 ~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-gGrIVnISSiAG~~G--g~saY  640 (1688)
T 2pff_A          564 WDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPMSPNHGTFG--GDGMY  640 (1688)
T ss_dssp             CCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC-EEECCCCCSCTTTSS--CBTTH
T ss_pred             CCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC-CCEEEEEEChHhccC--CchHH
Confidence             788888888877666 788887  8999999999999999999999  89987764 689999999999887  67899


Q ss_pred             ccCC
Q psy9256         262 TDHL  265 (265)
Q Consensus       262 ~asK  265 (265)
                      ++||
T Consensus       641 aASK  644 (1688)
T 2pff_A          641 SESK  644 (1688)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9987

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.91  E-value=9.8e-24  Score=220.50  Aligned_cols=165  Identities=21%  Similarity=0.286  Sum_probs=133.0

Q ss_pred             HhhhhccccCCcEEEEcCCCCc-hhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHH-HhCCCCCcEEEEeecCCChHH
Q psy9256          36 KINKRLNYFNNKVVWITGASSG-IGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCV-QAGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        36 ~~~~~~~~l~gk~vlItGas~G-IG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~  112 (265)
                      .+......+.||++|||||++| ||+++|++|+++|++|+++ +|+.+.++++.+++. +....+.++.+++||++|+++
T Consensus       665 ~~~~~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~s  744 (1887)
T 2uv8_A          665 KAAFNGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQD  744 (1887)
T ss_dssp             HHHHTCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHH
T ss_pred             hcccccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHH
Confidence            3345556789999999999998 9999999999999999998 577767766665553 333334567777777777777


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhh-----cc
Q psy9256         113 HRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQ-----FG  187 (265)
Q Consensus       113 ~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~-----~g  187 (265)
                      ++++                                                              ++++.+.     +|
T Consensus       745 V~al--------------------------------------------------------------v~~i~~~~~~~G~G  762 (1887)
T 2uv8_A          745 VEAL--------------------------------------------------------------IEFIYDTEKNGGLG  762 (1887)
T ss_dssp             HHHH--------------------------------------------------------------HHHHHSCTTTTSCC
T ss_pred             HHHH--------------------------------------------------------------HHHHHHhccccccC
Confidence            7777                                                              6666666     55


Q ss_pred             -cccEEEecccccccc-cccccc--hHHHHhhhhhhhhHHHHHHHHH--HHHhhhhcCCceEEEEcccccccCCCCCCcc
Q psy9256         188 -CLDILINNAGRSQRA-AWEDIE--LEVDRELFELNVFSVLSLSRIA--TSYFLAREQGGHLVVTSSIAGIVGAPYSGSY  261 (265)
Q Consensus       188 -~ldilVnnAG~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y  261 (265)
                       ++|+||||||+...+ ++.+.+  .++|+++|++|+.+++++++.+  +|.|.+++ .|+||++||.++..+  +.+.|
T Consensus       763 ~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-~G~IVnISS~ag~~g--g~~aY  839 (1887)
T 2uv8_A          763 WDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPMSPNHGTFG--GDGMY  839 (1887)
T ss_dssp             CCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC-EEEEEEECSCTTCSS--CBTTH
T ss_pred             CCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC-CCEEEEEcChHhccC--CCchH
Confidence             777777777776666 788888  8999999999999999999988  78887654 689999999999887  77899


Q ss_pred             ccCC
Q psy9256         262 TDHL  265 (265)
Q Consensus       262 ~asK  265 (265)
                      ++||
T Consensus       840 aASK  843 (1887)
T 2uv8_A          840 SESK  843 (1887)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9987

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.90  E-value=2.9e-24  Score=183.17  Aligned_cols=142  Identities=25%  Similarity=0.305  Sum_probs=114.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||++|||++++++|+++|++|++++|+++ .              .++.++.+|++|+++++++         
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------------~~~~~~~~D~~~~~~~~~~---------   57 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------------EDLIYVEGDVTREEDVRRA---------   57 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------------SSSEEEECCTTCHHHHHHH---------
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------------cceEEEeCCCCCHHHHHHH---------
Confidence            689999999999999999999999999999999865 2              1346778888888887777         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++ ++++++|++|||||.....++.
T Consensus        58 -----------------------------------------------------~~~~-~~~~~~d~li~~ag~~~~~~~~   83 (242)
T 1uay_A           58 -----------------------------------------------------VARA-QEEAPLFAVVSAAGVGLAEKIL   83 (242)
T ss_dssp             -----------------------------------------------------HHHH-HHHSCEEEEEECCCCCCCCCSB
T ss_pred             -----------------------------------------------------HHHH-HhhCCceEEEEcccccCccccc
Confidence                                                                 5555 4455566666666655444444


Q ss_pred             ccc----hHHHHhhhhhhhhHHHHHHHHHHHHhhhhc-----CCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIE----LEVDRELFELNVFSVLSLSRIATSYFLARE-----QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~----~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~-----~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+    .++|++.+++|+.+++.+++.+.|.|.+++     ..|+||++||.++..+.++.+.|++||
T Consensus        84 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  152 (242)
T 1uay_A           84 GKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASK  152 (242)
T ss_dssp             CSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHH
Confidence            444    449999999999999999999999998653     135999999999999999999999987

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.89  E-value=8.6e-24  Score=199.54  Aligned_cols=150  Identities=20%  Similarity=0.227  Sum_probs=123.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCC---cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSS---NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .+|+++||||++|||+++|++|+++|+ +|++++|+..   ..+++.+++...   +.++.++.||++|++++.++    
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dvtd~~~v~~~----  310 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL---GVRVTIAACDAADREALAAL----  310 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHH----
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHH----
Confidence            359999999999999999999999999 7899999743   344444444443   35677777777777666666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-  199 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-  199 (265)
                                                                                ++++.+. +++|++|||||+. 
T Consensus       311 ----------------------------------------------------------~~~i~~~-g~ld~vVh~AGv~~  331 (496)
T 3mje_A          311 ----------------------------------------------------------LAELPED-APLTAVFHSAGVAH  331 (496)
T ss_dssp             ----------------------------------------------------------HHTCCTT-SCEEEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHh-CCCeEEEECCcccC
Confidence                                                                      6666655 6888899998887 


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..+++.+.++++|++++++|+.|++++.+.+.+.+     .++||++||+++..+.++++.|++||
T Consensus       332 ~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-----~~~iV~~SS~a~~~g~~g~~~YaAaK  392 (496)
T 3mje_A          332 DDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-----LDAFVLFSSGAAVWGSGGQPGYAAAN  392 (496)
T ss_dssp             SCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-----CSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-----CCEEEEEeChHhcCCCCCcHHHHHHH
Confidence            67889999999999999999999999998776642     58999999999999999999999987

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.89  E-value=4.6e-23  Score=215.08  Aligned_cols=161  Identities=19%  Similarity=0.277  Sum_probs=128.9

Q ss_pred             hccccCCcEEEEcCCCCc-hhHHHHHHHHHcCCeEEEEe-cCCCcHHHHHHHH-HHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSG-IGEALALQLSKCGAKLVLSA-RSSSNLERVKNLC-VQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~G-IG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ...++.||++|||||++| ||+++|++|+++|++|++++ |+.+.+++..+++ .+....+.++.+++||++|+++++++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            334689999999999999 99999999999999999996 5565665555544 33433345677777777777777766


Q ss_pred             HHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhh---cc-cccEE
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQ---FG-CLDIL  192 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~---~g-~ldil  192 (265)
                                                                                    ++++.+.   +| ++|+|
T Consensus       726 --------------------------------------------------------------v~~i~~~~~~~G~~IDiL  743 (1878)
T 2uv9_A          726 --------------------------------------------------------------VNYIYDTKNGLGWDLDYV  743 (1878)
T ss_dssp             --------------------------------------------------------------HHHHHCSSSSCCCCCSEE
T ss_pred             --------------------------------------------------------------HHHHHHhhcccCCCCcEE
Confidence                                                                          7777666   77 78888


Q ss_pred             Eecccccccc-cccccc--hHHHHhhhhhhhhHHHHHHHH--HHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         193 INNAGRSQRA-AWEDIE--LEVDRELFELNVFSVLSLSRI--ATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       193 VnnAG~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~--~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |||||+...+ ++.+.+  .++|++++++|+.+++++++.  ++|.|.+++ .|+||++||.++..+  +++.|++||
T Consensus       744 VnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-~G~IVnISS~ag~~g--g~~aYaASK  818 (1878)
T 2uv9_A          744 VPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-AQVILPLSPNHGTFG--NDGLYSESK  818 (1878)
T ss_dssp             EECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-EEECCEECSCSSSSS--CCSSHHHHH
T ss_pred             EeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-CCEEEEEcchhhccC--CchHHHHHH
Confidence            8888877666 788888  899999999999999999987  789887654 589999999999887  578899987

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.89  E-value=9.1e-24  Score=209.68  Aligned_cols=148  Identities=20%  Similarity=0.273  Sum_probs=125.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHH-HcCC-eEEEEecCC---CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLS-KCGA-KLVLSARSS---SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~-~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ++|+++||||++|||+++|++|+ ++|+ +|++++|+.   +..+++.+++...   +.++.++.||++|+++++++   
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---G~~v~~~~~Dvsd~~~v~~~---  602 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY---GAEVSLQACDVADRETLAKV---  602 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHH---
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc---CCcEEEEEeecCCHHHHHHH---
Confidence            58999999999999999999999 7999 599999984   4445555554443   35677777777777776666   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++ ++|++|||||+.
T Consensus       603 -----------------------------------------------------------~~~~~~~~-~id~lVnnAGv~  622 (795)
T 3slk_A          603 -----------------------------------------------------------LASIPDEH-PLTAVVHAAGVL  622 (795)
T ss_dssp             -----------------------------------------------------------HHTSCTTS-CEEEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHhC-CCEEEEECCCcC
Confidence                                                                       77776665 899999999998


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+++.++|++++++|+.|++++.+.+.|.|       +||++||+++..+.|+++.|++||
T Consensus       623 ~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~~g~~g~~~YaAak  681 (795)
T 3slk_A          623 DDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGVLGSGGQGNYAAAN  681 (795)
T ss_dssp             CCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHHHTCSSCHHHHHHH
T ss_pred             CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhcCCCCCCHHHHHHH
Confidence            88899999999999999999999999999997766       899999999999999999999987

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.87  E-value=2.6e-22  Score=166.97  Aligned_cols=128  Identities=17%  Similarity=0.240  Sum_probs=110.7

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      .++||||++|||.+++++|+ +|++|++++|+++                    .+.+|++|+++++++           
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------------~~~~D~~~~~~~~~~-----------   52 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------------DVTVDITNIDSIKKM-----------   52 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------------SEECCTTCHHHHHHH-----------
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------------ceeeecCCHHHHHHH-----------
Confidence            69999999999999999999 9999999999764                    267788887776666           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         ++++    +++|++|||||.....++.+.
T Consensus        53 ---------------------------------------------------~~~~----~~~d~vi~~ag~~~~~~~~~~   77 (202)
T 3d7l_A           53 ---------------------------------------------------YEQV----GKVDAIVSATGSATFSPLTEL   77 (202)
T ss_dssp             ---------------------------------------------------HHHH----CCEEEEEECCCCCCCCCGGGC
T ss_pred             ---------------------------------------------------HHHh----CCCCEEEECCCCCCCCChhhC
Confidence                                                               4432    678888888887766778888


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.++|++.+++|+.+++++++.+.|.|.+   +|+||++||.++..+.++.+.|++||
T Consensus        78 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK  132 (202)
T 3d7l_A           78 TPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMEDPIVQGASAAMAN  132 (202)
T ss_dssp             CHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhcCCCCccHHHHHHH
Confidence            99999999999999999999999999853   38999999999999989999999887

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.86  E-value=1.2e-22  Score=175.23  Aligned_cols=116  Identities=20%  Similarity=0.212  Sum_probs=92.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||+++|++|+++|++|++++|+++.++.             .   +.+|++|+++++++          
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~---~~~Dl~~~~~v~~~----------   55 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------D---LSTAEGRKQAIADV----------   55 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------C---TTSHHHHHHHHHHH----------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------c---cccCCCCHHHHHHH----------
Confidence            689999999999999999999999999999998765431             0   45666666665554          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc-ccccEEEeccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~-g~ldilVnnAG~~~~~~~~  205 (265)
                                                                          ++    ++ +++|++|||||....    
T Consensus        56 ----------------------------------------------------~~----~~~~~id~lv~~Ag~~~~----   75 (257)
T 1fjh_A           56 ----------------------------------------------------LA----KCSKGMDGLVLCAGLGPQ----   75 (257)
T ss_dssp             ----------------------------------------------------HT----TCTTCCSEEEECCCCCTT----
T ss_pred             ----------------------------------------------------HH----HhCCCCCEEEECCCCCCC----
Confidence                                                                33    33 677777777775431    


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                         .+.|++.+++|+.++++++++++|.|.+++ .|+||++||.++.
T Consensus        76 ---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  118 (257)
T 1fjh_A           76 ---TKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASA  118 (257)
T ss_dssp             ---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGG
T ss_pred             ---cccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhh
Confidence               123899999999999999999999998765 6999999999988

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.86  E-value=8.3e-22  Score=185.86  Aligned_cols=150  Identities=21%  Similarity=0.221  Sum_probs=121.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCc---HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSN---LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .+++++||||++|||.+++++|+++|++ |++++|+.+.   .+++.+++...   +.++.++.||++|++++.++    
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dv~d~~~v~~~----  297 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL---GARTTVAACDVTDRESVREL----  297 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc---CCEEEEEEeCCCCHHHHHHH----
Confidence            5799999999999999999999999995 9999998653   34444444333   24566666666666666655    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++.+ +.++++|++|||||...
T Consensus       298 ----------------------------------------------------------~~~i-~~~g~ld~VIh~AG~~~  318 (486)
T 2fr1_A          298 ----------------------------------------------------------LGGI-GDDVPLSAVFHAAATLD  318 (486)
T ss_dssp             ----------------------------------------------------------HHTS-CTTSCEEEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHH-HhcCCCcEEEECCccCC
Confidence                                                                      7766 45688899999999887


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+++.+.+.++|++++++|+.|++++.+.+.+    .+ .++||++||+++..+.++++.|+++|
T Consensus       319 ~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~-~~~~V~~SS~a~~~g~~g~~~Yaaak  378 (486)
T 2fr1_A          319 DGTVDTLTGERIERASRAKVLGARNLHELTRE----LD-LTAFVLFSSFASAFGAPGLGGYAPGN  378 (486)
T ss_dssp             CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC-CSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             CCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CC-CCEEEEEcChHhcCCCCCCHHHHHHH
Confidence            88888999999999999999999999987654    22 58999999999999999999999886

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.86  E-value=2.1e-22  Score=167.85  Aligned_cols=138  Identities=23%  Similarity=0.344  Sum_probs=109.6

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||++++++|+++  +|++++|+++..+++.+.+   .    . .++.+|++|+++++++          
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~---~----~-~~~~~D~~~~~~~~~~----------   60 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV---G----A-RALPADLADELEAKAL----------   60 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH---T----C-EECCCCTTSHHHHHHH----------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc---c----C-cEEEeeCCCHHHHHHH----------
Confidence            57999999999999999999998  9999999876665544432   1    1 5666777777666655          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          +++    ++++|++|||||.....++.+
T Consensus        61 ----------------------------------------------------~~~----~~~id~vi~~ag~~~~~~~~~   84 (207)
T 2yut_A           61 ----------------------------------------------------LEE----AGPLDLLVHAVGKAGRASVRE   84 (207)
T ss_dssp             ----------------------------------------------------HHH----HCSEEEEEECCCCCCCBCSCC
T ss_pred             ----------------------------------------------------HHh----cCCCCEEEECCCcCCCCChhh
Confidence                                                                544    577888888888777777888


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.++|++.+++|+.+++++++.+    .+++ .|+||++||.++..+.++.+.|++||
T Consensus        85 ~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  138 (207)
T 2yut_A           85 AGRDLVEEMLAAHLLTAAFVLKHA----RFQK-GARAVFFGAYPRYVQVPGFAAYAAAK  138 (207)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHC----CEEE-EEEEEEECCCHHHHSSTTBHHHHHHH
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHH----HhcC-CcEEEEEcChhhccCCCCcchHHHHH
Confidence            899999999999999999999987    2333 58999999999999989999999887

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.85  E-value=9.4e-22  Score=213.60  Aligned_cols=155  Identities=21%  Similarity=0.130  Sum_probs=112.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .+|+++||||++|||+++|++|+++|++ |++++|+.++.+...+.+.+....+.++.++.||++|+++++++       
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~------- 1955 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSL------- 1955 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHH-------
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHH-------
Confidence            6899999999999999999999999997 88889987766544443333222234666677777777766666       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++. ++|++|++|||||+....+
T Consensus      1956 -------------------------------------------------------~~~~~-~~g~id~lVnnAgv~~~~~ 1979 (2512)
T 2vz8_A         1956 -------------------------------------------------------ITEAT-QLGPVGGVFNLAMVLRDAV 1979 (2512)
T ss_dssp             -------------------------------------------------------HHHHH-HHSCEEEEEECCCC-----
T ss_pred             -------------------------------------------------------HHHHH-hcCCCcEEEECCCcCCCCc
Confidence                                                                   66654 3677888888888777778


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+++.++|++++++|+.|++++.+.+.|.|.+   .|+||++||+++..+.++++.|++||
T Consensus      1980 ~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iSS~ag~~g~~g~~~Y~aaK 2038 (2512)
T 2vz8_A         1980 LENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFVIFSSVSCGRGNAGQANYGFAN 2038 (2512)
T ss_dssp             -----------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEECCHHHHTTCTTCHHHHHHH
T ss_pred             hhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEecchhhcCCCCCcHHHHHHH
Confidence            889999999999999999999999999998854   38999999999999999999999987

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.84  E-value=7.7e-21  Score=180.17  Aligned_cols=147  Identities=22%  Similarity=0.226  Sum_probs=118.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCc---HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSN---LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .+++++||||++|||.+++++|+++|+ +|++++|+.+.   .+++.+++..   .+.++.++.||++|++++.++    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~---~g~~v~~~~~Dvtd~~~v~~~----  330 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG---HGCEVVHAACDVAERDALAAL----  330 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT---TTCEEEEEECCSSCHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh---cCCEEEEEEeCCCCHHHHHHH----
Confidence            579999999999999999999999999 59999998643   3333333332   235677777777777766655    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++.     +++|++|||||+..
T Consensus       331 ----------------------------------------------------------~~~-----~~ld~VVh~AGv~~  347 (511)
T 2z5l_A          331 ----------------------------------------------------------VTA-----YPPNAVFHTAGILD  347 (511)
T ss_dssp             ----------------------------------------------------------HHH-----SCCSEEEECCCCCC
T ss_pred             ----------------------------------------------------------Hhc-----CCCcEEEECCcccC
Confidence                                                                      544     67888888888887


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+++.+.+.++|++++++|+.|++++.+.+.+. .   ..++||++||+++..+.++++.|+++|
T Consensus       348 ~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~---~~~~~V~~SS~a~~~g~~g~~~YaaaK  408 (511)
T 2z5l_A          348 DAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K---GLDAFVLFSSVTGTWGNAGQGAYAAAN  408 (511)
T ss_dssp             CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T---TCCCEEEEEEGGGTTCCTTBHHHHHHH
T ss_pred             CcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c---CCCEEEEEeCHHhcCCCCCCHHHHHHH
Confidence            788889999999999999999999998865432 1   258999999999999999999999887

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.82  E-value=1.1e-19  Score=197.73  Aligned_cols=169  Identities=15%  Similarity=0.161  Sum_probs=119.3

Q ss_pred             cccCCcEEEEcCCCCc-hhHHHHHHHHHcCCeEEEEecCCCc-HHH-HHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSG-IGEALALQLSKCGAKLVLSARSSSN-LER-VKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        42 ~~l~gk~vlItGas~G-IG~aia~~l~~~G~~V~~~~r~~~~-~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ..++||+++||||++| ||+++|++|+++|++|++++|+.+. ..+ +.+...+....+.++..+++|++|+++++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence            3489999999999999 9999999999999999999998776 111 233333444456788899999999999999977


Q ss_pred             HHHH----HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEe
Q psy9256         119 AVIQ----QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILIN  194 (265)
Q Consensus       119 ~~~~----~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVn  194 (265)
                      .+.+    .+|++|+||||||+                                                    +|.++.
T Consensus      2212 ~i~~~~~~~fG~IDILVNNAGi----------------------------------------------------~d~~~~ 2239 (3089)
T 3zen_D         2212 WVGTEQTESLGPQSIHLKDAQT----------------------------------------------------PTLLFP 2239 (3089)
T ss_dssp             HHTSCCEEEESSSEEEECCCCC----------------------------------------------------CSEEEE
T ss_pred             HHHhhhhhhcCCCCEEEECCCc----------------------------------------------------ccccCc
Confidence            7776    66777777777762                                                    234444


Q ss_pred             cccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCC---ceEEEEcccccccCCCCCCccccCC
Q psy9256         195 NAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQG---GHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       195 nAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~---g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++.......++. .+.|+..+++|+.+++++++.+.|.|.+++.+   +.|++.++..+.  .++.++|++||
T Consensus      2240 ~a~~~~~~~~e~~-~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g~--~g~~~aYsASK 2310 (3089)
T 3zen_D         2240 FAAPRVAGDMSEV-GSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPNRGM--FGGDGAYGEAK 2310 (3089)
T ss_dssp             CCCCCCCCTTSCT-TSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSSTTS--CSSCSSHHHHG
T ss_pred             ccccccCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCccccc--CCCchHHHHHH
Confidence            4433222222221 12344459999999999999999999876522   233444444433  34567899998

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.80  E-value=6.2e-20  Score=159.53  Aligned_cols=128  Identities=19%  Similarity=0.171  Sum_probs=101.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |++|+++||||++|||.+++++|+++|++|++++|+++..+            ..++.++.+|++|++++.++       
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~-------   61 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLADANAVNAM-------   61 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHH-------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHH-------
Confidence            45789999999999999999999999999999999876543            25678888888888776666       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++       ++|++|||||..    
T Consensus        62 -------------------------------------------------------~~-------~~D~vi~~Ag~~----   75 (267)
T 3rft_A           62 -------------------------------------------------------VA-------GCDGIVHLGGIS----   75 (267)
T ss_dssp             -------------------------------------------------------HT-------TCSEEEECCSCC----
T ss_pred             -------------------------------------------------------Hc-------CCCEEEECCCCc----
Confidence                                                                   22       467777777752    


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc------------cCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI------------VGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~------------~~~~~~~~Y~asK  265 (265)
                          +.++|++.+++|+.|++++++++.+    ++ .++||++||.++.            .+.+..+.|++||
T Consensus        76 ----~~~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK  140 (267)
T 3rft_A           76 ----VEKPFEQILQGNIIGLYNLYEAARA----HG-QPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSK  140 (267)
T ss_dssp             ----SCCCHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHH
T ss_pred             ----CcCCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHH
Confidence                3456889999999999999998843    23 5899999998877            3345557898887

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.79  E-value=4.3e-20  Score=158.13  Aligned_cols=120  Identities=25%  Similarity=0.264  Sum_probs=93.2

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||++|||.+++++|+++|++|++++|+++..+.                .+.+|++++++++++          
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~D~~~~~~~~~~----------   55 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------------DLSTPGGRETAVAAV----------   55 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------------CTTSHHHHHHHHHHH----------
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------------cccCCcccHHHHHHH----------
Confidence            579999999999999999999999999999998765321                034566665555544          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++++   .+++|++|||||....     
T Consensus        56 ----------------------------------------------------~~~~---~~~~d~vi~~Ag~~~~-----   75 (255)
T 2dkn_A           56 ----------------------------------------------------LDRC---GGVLDGLVCCAGVGVT-----   75 (255)
T ss_dssp             ----------------------------------------------------HHHH---TTCCSEEEECCCCCTT-----
T ss_pred             ----------------------------------------------------HHHc---CCCccEEEECCCCCCc-----
Confidence                                                                4432   2567777777775431     


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA  255 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~  255 (265)
                        .++|++.+++|+.+++.+++.+.|.|.+++ .++||++||.++..+.
T Consensus        76 --~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~  121 (255)
T 2dkn_A           76 --AANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPG  121 (255)
T ss_dssp             --SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTT
T ss_pred             --chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEecccccccc
Confidence              234889999999999999999999998764 6899999999887654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.73  E-value=3.7e-18  Score=145.23  Aligned_cols=134  Identities=14%  Similarity=0.195  Sum_probs=96.5

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcE-EEEeecCCChHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSI-YTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~  117 (265)
                      .++++++||+++||||+++||.+++++|+++|++|++++|+++..+++..         .++ .++.+|++  +++    
T Consensus        14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~---------~~~~~~~~~Dl~--~~~----   78 (236)
T 3e8x_A           14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE---------RGASDIVVANLE--EDF----   78 (236)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---------TTCSEEEECCTT--SCC----
T ss_pred             ccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh---------CCCceEEEcccH--HHH----
Confidence            45567899999999999999999999999999999999999887665433         246 67888887  211    


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                       .+.++++|++|||||
T Consensus        79 -----------------------------------------------------------------~~~~~~~D~vi~~ag   93 (236)
T 3e8x_A           79 -----------------------------------------------------------------SHAFASIDAVVFAAG   93 (236)
T ss_dssp             -----------------------------------------------------------------GGGGTTCSEEEECCC
T ss_pred             -----------------------------------------------------------------HHHHcCCCEEEECCC
Confidence                                                                             122345677777776


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC---CCCCccccCC
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA---PYSGSYTDHL  265 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~---~~~~~Y~asK  265 (265)
                      ...        .++|++.+++|+.++..+++++..    .+ .++||++||..+..+.   +....|+++|
T Consensus        94 ~~~--------~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK  151 (236)
T 3e8x_A           94 SGP--------HTGADKTILIDLWGAIKTIQEAEK----RG-IKRFIMVSSVGTVDPDQGPMNMRHYLVAK  151 (236)
T ss_dssp             CCT--------TSCHHHHHHTTTHHHHHHHHHHHH----HT-CCEEEEECCTTCSCGGGSCGGGHHHHHHH
T ss_pred             CCC--------CCCccccchhhHHHHHHHHHHHHH----cC-CCEEEEEecCCCCCCCCChhhhhhHHHHH
Confidence            432        256889999999999999988733    33 5899999997776653   3556787776

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.70  E-value=3.9e-17  Score=145.66  Aligned_cols=144  Identities=14%  Similarity=0.102  Sum_probs=102.2

Q ss_pred             HhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHH
Q psy9256          36 KINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRR  115 (265)
Q Consensus        36 ~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (265)
                      ....+..++.+++++||||+++||.+++++|+++|++|++++|+.+...+..+.       -.++.++.+|++|++++.+
T Consensus        10 ~~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------l~~v~~~~~Dl~d~~~~~~   82 (330)
T 2pzm_A           10 HSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP-------VAGLSVIEGSVTDAGLLER   82 (330)
T ss_dssp             ----CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS-------CTTEEEEECCTTCHHHHHH
T ss_pred             cccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc-------cCCceEEEeeCCCHHHHHH
Confidence            344566788999999999999999999999999999999999976543211110       1356667777777776665


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEec
Q psy9256         116 CFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       116 ~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn  195 (265)
                      +                                                              ++++     ++|++||+
T Consensus        83 ~--------------------------------------------------------------~~~~-----~~D~vih~   95 (330)
T 2pzm_A           83 A--------------------------------------------------------------FDSF-----KPTHVVHS   95 (330)
T ss_dssp             H--------------------------------------------------------------HHHH-----CCSEEEEC
T ss_pred             H--------------------------------------------------------------Hhhc-----CCCEEEEC
Confidence            5                                                              4433     57778888


Q ss_pred             ccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC-----C------CCCccccC
Q psy9256         196 AGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA-----P------YSGSYTDH  264 (265)
Q Consensus       196 AG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~-----~------~~~~Y~as  264 (265)
                      ||.....     +.++++  +++|+.++..+++++..    .+ .+++|++||.+..-+.     |      ....|++|
T Consensus        96 A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~s  163 (330)
T 2pzm_A           96 AAAYKDP-----DDWAED--AATNVQGSINVAKAASK----AG-VKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGIS  163 (330)
T ss_dssp             CCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----HT-CSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHH
T ss_pred             CccCCCc-----cccChh--HHHHHHHHHHHHHHHHH----cC-CCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHH
Confidence            7764322     335555  99999999999998873    23 5899999998765433     2      45678877


Q ss_pred             C
Q psy9256         265 L  265 (265)
Q Consensus       265 K  265 (265)
                      |
T Consensus       164 K  164 (330)
T 2pzm_A          164 K  164 (330)
T ss_dssp             H
T ss_pred             H
Confidence            6

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.68  E-value=2.1e-17  Score=140.67  Aligned_cols=131  Identities=19%  Similarity=0.169  Sum_probs=95.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .|++|+++||||++|||.+++++|+++|+  +|++++|+++..++..         ..++.++.+|++|++++.++    
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~----   81 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---------YKNVNQEVVDFEKLDDYASA----   81 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---------GGGCEEEECCGGGGGGGGGG----
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc---------cCCceEEecCcCCHHHHHHH----
Confidence            36789999999999999999999999999  9999999876543221         02455667777776554433    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                +       .++|++|||||...
T Consensus        82 ----------------------------------------------------------~-------~~~d~vi~~ag~~~   96 (242)
T 2bka_A           82 ----------------------------------------------------------F-------QGHDVGFCCLGTTR   96 (242)
T ss_dssp             ----------------------------------------------------------G-------SSCSEEEECCCCCH
T ss_pred             ----------------------------------------------------------h-------cCCCEEEECCCccc
Confidence                                                                      2       25777777777542


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .       .+++++.+++|+.++..+++++.    +.+ .++||++||.++..  +....|++||
T Consensus        97 ~-------~~~~~~~~~~n~~~~~~~~~~~~----~~~-~~~iv~~SS~~~~~--~~~~~Y~~sK  147 (242)
T 2bka_A           97 G-------KAGAEGFVRVDRDYVLKSAELAK----AGG-CKHFNLLSSKGADK--SSNFLYLQVK  147 (242)
T ss_dssp             H-------HHHHHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEECCTTCCT--TCSSHHHHHH
T ss_pred             c-------cCCcccceeeeHHHHHHHHHHHH----HCC-CCEEEEEccCcCCC--CCcchHHHHH
Confidence            2       13467889999999988877643    333 58999999987764  3346788776

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.68  E-value=1.6e-16  Score=141.58  Aligned_cols=144  Identities=17%  Similarity=0.120  Sum_probs=101.1

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |++|+++||||+++||.+++++|+++|++|++++|+.+..+.  +.+.... ...++.++.+|++|++++.++       
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~-------   70 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELG-IENDVKIIHMDLLEFSNIIRT-------   70 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTT-CTTTEEECCCCTTCHHHHHHH-------
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhcc-ccCceeEEECCCCCHHHHHHH-------
Confidence            457899999999999999999999999999999998765432  1122222 123566677777777666655       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++..     ++|++||+||....  
T Consensus        71 -------------------------------------------------------~~~~-----~~d~vih~A~~~~~--   88 (345)
T 2z1m_A           71 -------------------------------------------------------IEKV-----QPDEVYNLAAQSFV--   88 (345)
T ss_dssp             -------------------------------------------------------HHHH-----CCSEEEECCCCCCH--
T ss_pred             -------------------------------------------------------HHhc-----CCCEEEECCCCcch--
Confidence                                                                   4333     56777777775421  


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-----------cCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-----------VGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-----------~~~~~~~~Y~asK  265 (265)
                        +.+.+++++.+++|+.++..+++++.+.    +..+++|++||.+..           .+.+....|++||
T Consensus        89 --~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK  155 (345)
T 2z1m_A           89 --GVSFEQPILTAEVDAIGVLRILEALRTV----KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAK  155 (345)
T ss_dssp             --HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             --hhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHH
Confidence              2334678899999999999999988752    213899999998542           2334456788776

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.67  E-value=2.4e-16  Score=140.61  Aligned_cols=130  Identities=21%  Similarity=0.203  Sum_probs=94.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .+++++||||+++||.+++++|+++|++|++++|+.+..++..+.+....  +.++.++.+|++|++++.++        
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~--------   73 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT--GKTPAFHETDVSDERALARI--------   73 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH--SCCCEEECCCTTCHHHHHHH--------
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc--CCCceEEEeecCCHHHHHHH--------
Confidence            46799999999999999999999999999999998877766655554432  24566778888887776666        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++.     +++|++||+||...... 
T Consensus        74 ------------------------------------------------------~~~-----~~~d~vih~A~~~~~~~-   93 (341)
T 3enk_A           74 ------------------------------------------------------FDA-----HPITAAIHFAALKAVGE-   93 (341)
T ss_dssp             ------------------------------------------------------HHH-----SCCCEEEECCCCCCHHH-
T ss_pred             ------------------------------------------------------Hhc-----cCCcEEEECccccccCc-
Confidence                                                                  332     35677777776543322 


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                         ..++.++.+++|+.++..++++    +.+.+ .+++|++||.+..
T Consensus        94 ---~~~~~~~~~~~n~~~~~~l~~~----~~~~~-~~~iv~~SS~~~~  133 (341)
T 3enk_A           94 ---SVAKPIEYYRNNLDSLLSLLRV----MRERA-VKRIVFSSSATVY  133 (341)
T ss_dssp             ---HHHCHHHHHHHHHHHHHHHHHH----HHHTT-CCEEEEEEEGGGB
T ss_pred             ---cccChHHHHHHHHHHHHHHHHH----HHhCC-CCEEEEEecceEe
Confidence               2234467788999998887665    34443 5899999997654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.67  E-value=1.3e-16  Score=144.72  Aligned_cols=187  Identities=12%  Similarity=0.067  Sum_probs=123.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHH-HcCCeEEEEecCCCcH------------HHHHHHHHHhCCCCCcEEEEeecCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLS-KCGAKLVLSARSSSNL------------ERVKNLCVQAGAHPQSIYTLTLDVT  108 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~~~D~~  108 (265)
                      ....+|++||||||+|||+|.+..++ +.|++|+++.+..+..            ....+.+.+.+   .+...++||++
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G---~~a~~i~~Dv~  122 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG---LYSVTIDGDAF  122 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT---CCEEEEESCTT
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC---CCceeEeCCCC
Confidence            45678999999999999999999998 7899999998765432            23344455544   78999999999


Q ss_pred             ChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc-c
Q psy9256         109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF-G  187 (265)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~-g  187 (265)
                      |+++++++++.+++++|++|+||||+|...+..+..-+..                               ....+-. .
T Consensus       123 d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~-------------------------------~S~LKpi~~  171 (401)
T 4ggo_A          123 SDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMH-------------------------------KSVLKPFGK  171 (401)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEE-------------------------------ECCCCCSSS
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCcee-------------------------------eeeeccccc
Confidence            9999999999999999999999999997655433221100                               0000000 0


Q ss_pred             cccEEEec--ccccccccccccchH---HHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC--CCCc
Q psy9256         188 CLDILINN--AGRSQRAAWEDIELE---VDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP--YSGS  260 (265)
Q Consensus       188 ~ldilVnn--AG~~~~~~~~~~~~~---~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~--~~~~  260 (265)
                      .+..-..+  ........++-.+.+   .+..+|.....+.+...+...|.|..   +++++.+|++.+....|  +.++
T Consensus       172 ~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla~---G~siva~SYiGse~t~P~Y~~G~  248 (401)
T 4ggo_A          172 TFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGEDWERWIKQLSKEGLLEE---GCITLAYSYIGPEATQALYRKGT  248 (401)
T ss_dssp             CEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE---EEEEEEEECCCCGGGHHHHTTSH
T ss_pred             ccccccccccccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhcccC---CceEEEEeccCcceeecCCCccH
Confidence            01110000  011111122223333   45566666677777777777777742   58999999998876555  4456


Q ss_pred             cccCC
Q psy9256         261 YTDHL  265 (265)
Q Consensus       261 Y~asK  265 (265)
                      ++++|
T Consensus       249 mG~AK  253 (401)
T 4ggo_A          249 IGKAK  253 (401)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77665

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.64  E-value=6.9e-16  Score=137.76  Aligned_cols=141  Identities=18%  Similarity=0.122  Sum_probs=102.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcC-------CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCG-------AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRR  115 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  115 (265)
                      .+++++++||||+++||.+++++|+++|       ++|++++|+.+...+         ....++.++.+|++|++++.+
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~   81 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------GFSGAVDARAADLSAPGEAEK   81 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------TCCSEEEEEECCTTSTTHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------ccCCceeEEEcCCCCHHHHHH
Confidence            4688999999999999999999999999       899999997654321         013466777788887776655


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEec
Q psy9256         116 CFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       116 ~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn  195 (265)
                      +                                                              ++      +++|++||+
T Consensus        82 ~--------------------------------------------------------------~~------~~~d~vih~   93 (342)
T 2hrz_A           82 L--------------------------------------------------------------VE------ARPDVIFHL   93 (342)
T ss_dssp             H--------------------------------------------------------------HH------TCCSEEEEC
T ss_pred             H--------------------------------------------------------------Hh------cCCCEEEEC
Confidence            5                                                              32      356777777


Q ss_pred             ccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC-C----------CCCccccC
Q psy9256         196 AGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA-P----------YSGSYTDH  264 (265)
Q Consensus       196 AG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~-~----------~~~~Y~as  264 (265)
                      ||....     .+.+++++.+++|+.++..+++++.+...+++..+++|++||.+...+. +          ....|++|
T Consensus        94 A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~s  168 (342)
T 2hrz_A           94 AAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQ  168 (342)
T ss_dssp             CCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHH
T ss_pred             CccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHH
Confidence            775431     2346789999999999999999887754322124799999998665432 1          45678877


Q ss_pred             C
Q psy9256         265 L  265 (265)
Q Consensus       265 K  265 (265)
                      |
T Consensus       169 K  169 (342)
T 2hrz_A          169 K  169 (342)
T ss_dssp             H
T ss_pred             H
Confidence            6

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.64  E-value=3.6e-16  Score=131.56  Aligned_cols=112  Identities=11%  Similarity=0.021  Sum_probs=84.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHH-HcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLS-KCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|+++||||++|||.+++++|+ ++|++|++++|+++ .++++.    ..   ..++.++.+|++|++++.++       
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~---~~~~~~~~~D~~d~~~~~~~-------   70 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID---HERVTVIEGSFQNPGXLEQA-------   70 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT---STTEEEEECCTTCHHHHHHH-------
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC---CCceEEEECCCCCHHHHHHH-------
Confidence            4789999999999999999999 89999999999876 554432    11   35677888888888776655       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             +       .++|++|||||..    
T Consensus        71 -------------------------------------------------------~-------~~~d~vv~~ag~~----   84 (221)
T 3r6d_A           71 -------------------------------------------------------V-------TNAEVVFVGAMES----   84 (221)
T ss_dssp             -------------------------------------------------------H-------TTCSEEEESCCCC----
T ss_pred             -------------------------------------------------------H-------cCCCEEEEcCCCC----
Confidence                                                                   2       1457777777632    


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS  258 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~  258 (265)
                                     |+.     ++.+++.|++++ .++||++||.++..+.|..
T Consensus        85 ---------------n~~-----~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~  118 (221)
T 3r6d_A           85 ---------------GSD-----MASIVKALSRXN-IRRVIGVSMAGLSGEFPVA  118 (221)
T ss_dssp             ---------------HHH-----HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHH
T ss_pred             ---------------Chh-----HHHHHHHHHhcC-CCeEEEEeeceecCCCCcc
Confidence                           222     788999988765 6899999999887765543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.64  E-value=8.9e-16  Score=137.96  Aligned_cols=130  Identities=15%  Similarity=0.128  Sum_probs=96.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .+++++++||||+++||..++++|+++|++|++++|+.+..+...+.+.    ...++.++.+|++|++++.++      
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~------   75 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIGDIRDQNKLLES------   75 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT----TTTTSEEEECCTTCHHHHHHH------
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc----cCCceEEEEccccCHHHHHHH------
Confidence            3568899999999999999999999999999999998776554433321    124566777777777766655      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++..     ++|++||+||..   
T Consensus        76 --------------------------------------------------------~~~~-----~~d~vih~A~~~---   91 (357)
T 1rkx_A           76 --------------------------------------------------------IREF-----QPEIVFHMAAQP---   91 (357)
T ss_dssp             --------------------------------------------------------HHHH-----CCSEEEECCSCC---
T ss_pred             --------------------------------------------------------HHhc-----CCCEEEECCCCc---
Confidence                                                                    4332     577788877742   


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                       ..+.+.+++++.+++|+.++..+++++.+.   . ..+++|++||.+.
T Consensus        92 -~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~-~~~~~v~~SS~~v  135 (357)
T 1rkx_A           92 -LVRLSYSEPVETYSTNVMGTVYLLEAIRHV---G-GVKAVVNITSDKC  135 (357)
T ss_dssp             -CHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---C-CCCEEEEECCGGG
T ss_pred             -ccccchhCHHHHHHHHHHHHHHHHHHHHHh---C-CCCeEEEecCHHH
Confidence             122345678899999999999999988763   2 1479999999763

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.63  E-value=8.6e-16  Score=138.56  Aligned_cols=147  Identities=19%  Similarity=0.108  Sum_probs=94.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcH--HHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL--ERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +|+++||||+++||.+++++|+++|++|++++|+.+..  +.+.+........+.++.++.+|++|++++.++       
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-------   73 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRI-------   73 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHH-------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHH-------
Confidence            36899999999999999999999999999999976532  111111000000113455556666665555444       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++..     ++|++||+||....  
T Consensus        74 -------------------------------------------------------~~~~-----~~d~vih~A~~~~~--   91 (372)
T 1db3_A           74 -------------------------------------------------------LREV-----QPDEVYNLGAMSHV--   91 (372)
T ss_dssp             -------------------------------------------------------HHHH-----CCSEEEECCCCCTT--
T ss_pred             -------------------------------------------------------HHhc-----CCCEEEECCcccCc--
Confidence                                                                   4443     57888888875432  


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC-----------CCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA-----------PYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~-----------~~~~~Y~asK  265 (265)
                        +.+.+++++.+++|+.++..+++++.+...+ + ++++|++||.+..-+.           .....|+.||
T Consensus        92 --~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK  160 (372)
T 1db3_A           92 --AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-K-KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (372)
T ss_dssp             --TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             --cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-C-CcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence              2334567889999999999999999886543 1 4899999997654321           2245687776

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.63  E-value=3e-15  Score=136.24  Aligned_cols=132  Identities=17%  Similarity=0.185  Sum_probs=91.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHH-HcCCeEEEEecCCCc---------HHHHHHHHHHhCCC--CCc---EEEEeecCCCh
Q psy9256          46 NKVVWITGASSGIGEALALQLS-KCGAKLVLSARSSSN---------LERVKNLCVQAGAH--PQS---IYTLTLDVTQT  110 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~-~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~--~~~---~~~~~~D~~~~  110 (265)
                      +++++||||+++||.+++++|+ ++|++|++++|+...         .+.+.+.+.+....  ..+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4579999999999999999999 999999999987654         34443333333211  113   56667777776


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccccc
Q psy9256         111 KYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  190 (265)
Q Consensus       111 ~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ld  190 (265)
                      +++.++                                                              ++    .++++|
T Consensus        82 ~~~~~~--------------------------------------------------------------~~----~~~~~d   95 (397)
T 1gy8_A           82 DFLNGV--------------------------------------------------------------FT----RHGPID   95 (397)
T ss_dssp             HHHHHH--------------------------------------------------------------HH----HSCCCC
T ss_pred             HHHHHH--------------------------------------------------------------HH----hcCCCC
Confidence            665544                                                              33    234577


Q ss_pred             EEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         191 ILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       191 ilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      ++||+||.....    .+.+++++.+++|+.++..+++++..    .+ .+++|++||.+..
T Consensus        96 ~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~iv~~SS~~v~  148 (397)
T 1gy8_A           96 AVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL----HK-CDKIIFSSSAAIF  148 (397)
T ss_dssp             EEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGT
T ss_pred             EEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHHH----hC-CCEEEEECCHHHh
Confidence            777777754322    13466788999999999999987532    33 5799999996543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.62  E-value=1.4e-15  Score=138.04  Aligned_cols=145  Identities=19%  Similarity=0.100  Sum_probs=100.2

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-----HHHHHHHHHHhCCCCC-cEEEEeecCCChHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-----LERVKNLCVQAGAHPQ-SIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |+++||||+++||.+++++|+++|++|++++|+.+.     ++.+......   .+. ++.++.+|++|++++.++    
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~----  101 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN---VNKALMKLHYADLTDASSLRRW----  101 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-----------CCEEEEECCTTCHHHHHHH----
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc---ccccceEEEECCCCCHHHHHHH----
Confidence            789999999999999999999999999999998654     2211111100   011 455566666666555544    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++..     ++|++||+||...
T Consensus       102 ----------------------------------------------------------~~~~-----~~d~Vih~A~~~~  118 (381)
T 1n7h_A          102 ----------------------------------------------------------IDVI-----KPDEVYNLAAQSH  118 (381)
T ss_dssp             ----------------------------------------------------------HHHH-----CCSEEEECCSCCC
T ss_pred             ----------------------------------------------------------HHhc-----CCCEEEECCcccC
Confidence                                                                      4433     5778888877543


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc----------CCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV----------GAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~----------~~~~~~~Y~asK  265 (265)
                      ..    .+.+++++.+++|+.++..+++++.+...+++.++++|++||.+..-          +......|+.||
T Consensus       119 ~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK  189 (381)
T 1n7h_A          119 VA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASK  189 (381)
T ss_dssp             HH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHH
T ss_pred             cc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHH
Confidence            21    33467889999999999999999999876544357999999976432          123356687765

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.61  E-value=1.3e-15  Score=129.70  Aligned_cols=136  Identities=17%  Similarity=0.117  Sum_probs=94.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKC--GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +++|+++||||+++||.+++++|+++  |++|++++|+++..+++          ..++.++.+|++|++++.++     
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~D~~d~~~~~~~-----   66 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----------GGEADVFIGDITDADSINPA-----   66 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----------TCCTTEEECCTTSHHHHHHH-----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc----------CCCeeEEEecCCCHHHHHHH-----
Confidence            45789999999999999999999999  89999999976443221          13456778888887766655     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++       .+|++||+||....
T Consensus        67 ---------------------------------------------------------~~-------~~d~vi~~a~~~~~   82 (253)
T 1xq6_A           67 ---------------------------------------------------------FQ-------GIDALVILTSAVPK   82 (253)
T ss_dssp             ---------------------------------------------------------HT-------TCSEEEECCCCCCE
T ss_pred             ---------------------------------------------------------Hc-------CCCEEEEecccccc
Confidence                                                                     21       35666666654422


Q ss_pred             cc---------ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCcccc
Q psy9256         202 AA---------WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTD  263 (265)
Q Consensus       202 ~~---------~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~a  263 (265)
                      ..         ..+...+++++.+++|+.++..+++++..    .+ .+++|++||.++..+.+....|+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~~  148 (253)
T 1xq6_A           83 MKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AG-VKHIVVVGSMGGTNPDHPLNKLGN  148 (253)
T ss_dssp             ECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HT-CSEEEEEEETTTTCTTCGGGGGGG
T ss_pred             ccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cC-CCEEEEEcCccCCCCCCccccccc
Confidence            11         12233355667899999999888876643    33 579999999987655444445543

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.61  E-value=1.6e-15  Score=134.13  Aligned_cols=135  Identities=15%  Similarity=0.117  Sum_probs=98.2

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ..+-++++||||+++||.+++++|+++|++|++++|+.+. +.    +        ++.++.+|++|++++.++      
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l--------~~~~~~~Dl~d~~~~~~~------   69 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P--------NVEMISLDIMDSQRVKKV------   69 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T--------TEEEEECCTTCHHHHHHH------
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c--------eeeEEECCCCCHHHHHHH------
Confidence            3456789999999999999999999999999999998654 21    0        466778888888776666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++.     +++|++||+||.... 
T Consensus        70 --------------------------------------------------------~~~-----~~~d~vih~A~~~~~-   87 (321)
T 2pk3_A           70 --------------------------------------------------------ISD-----IKPDYIFHLAAKSSV-   87 (321)
T ss_dssp             --------------------------------------------------------HHH-----HCCSEEEECCSCCCH-
T ss_pred             --------------------------------------------------------HHh-----cCCCEEEEcCcccch-
Confidence                                                                    332     356777777775432 


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC-------------CCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA-------------PYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~-------------~~~~~Y~asK  265 (265)
                         +.+.+++++.+++|+.++..+++++ +.+.  + .+++|++||.+..-+.             +....|+.||
T Consensus        88 ---~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~-~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK  156 (321)
T 2pk3_A           88 ---KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L-DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSK  156 (321)
T ss_dssp             ---HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C-CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHH
T ss_pred             ---hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C-CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHH
Confidence               1233567899999999999999988 6552  2 5899999998654322             3456788776

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.61  E-value=2.4e-15  Score=135.45  Aligned_cols=137  Identities=14%  Similarity=0.148  Sum_probs=101.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHc-CC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKC-GA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .+++|+++||||+++||.+++++|++. |+ +|++.+|++++.+++.+.+   .  ..++.++.+|++|++++.++    
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~---~--~~~v~~~~~Dl~d~~~l~~~----   88 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEF---N--DPRMRFFIGDVRDLERLNYA----   88 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHH---C--CTTEEEEECCTTCHHHHHHH----
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHh---c--CCCEEEEECCCCCHHHHHHH----
Confidence            467899999999999999999999999 98 9999999876655554433   1  24677888888887766555    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                +       .++|++||+||...
T Consensus        89 ----------------------------------------------------------~-------~~~D~Vih~Aa~~~  103 (344)
T 2gn4_A           89 ----------------------------------------------------------L-------EGVDICIHAAALKH  103 (344)
T ss_dssp             ----------------------------------------------------------T-------TTCSEEEECCCCCC
T ss_pred             ----------------------------------------------------------H-------hcCCEEEECCCCCC
Confidence                                                                      2       24667777776543


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..    ....+..+.+++|+.|+..+++++.+.    + .+++|++||..+..|   ...|++||
T Consensus       104 ~~----~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~-v~~~V~~SS~~~~~p---~~~Y~~sK  156 (344)
T 2gn4_A          104 VP----IAEYNPLECIKTNIMGASNVINACLKN----A-ISQVIALSTDKAANP---INLYGATK  156 (344)
T ss_dssp             HH----HHHHSHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEECCGGGSSC---CSHHHHHH
T ss_pred             CC----chhcCHHHHHHHHHHHHHHHHHHHHhC----C-CCEEEEecCCccCCC---ccHHHHHH
Confidence            21    112335688999999999999998874    2 579999999776543   46788776

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.61  E-value=1.5e-15  Score=135.59  Aligned_cols=128  Identities=14%  Similarity=0.056  Sum_probs=88.6

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      .+...+++++++||||+++||.+++++|+++|++|++++|+.+...+...       .-.++.++.+|++|++++.++  
T Consensus        14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~-------~~~~~~~~~~Dl~d~~~~~~~--   84 (333)
T 2q1w_A           14 LVPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK-------DHPNLTFVEGSIADHALVNQL--   84 (333)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-------CCTTEEEEECCTTCHHHHHHH--
T ss_pred             eeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh-------hcCCceEEEEeCCCHHHHHHH--
Confidence            34556788999999999999999999999999999999997643211100       003566677777777665555  


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                  ++.     +++|++||+||.
T Consensus        85 ------------------------------------------------------------~~~-----~~~D~vih~A~~   99 (333)
T 2q1w_A           85 ------------------------------------------------------------IGD-----LQPDAVVHTAAS   99 (333)
T ss_dssp             ------------------------------------------------------------HHH-----HCCSEEEECCCC
T ss_pred             ------------------------------------------------------------Hhc-----cCCcEEEECcee
Confidence                                                                        332     357888888876


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      ....     +.++++  +++|+.++..+++++.+.    + .+++|++||.+..
T Consensus       100 ~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~-~~~iV~~SS~~~~  141 (333)
T 2q1w_A          100 YKDP-----DDWYND--TLTNCVGGSNVVQAAKKN----N-VGRFVYFQTALCY  141 (333)
T ss_dssp             CSCT-----TCHHHH--HHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGG
T ss_pred             cCCC-----ccCChH--HHHHHHHHHHHHHHHHHh----C-CCEEEEECcHHHh
Confidence            4332     234444  999999999999988762    2 5899999997654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.60  E-value=1.7e-15  Score=137.04  Aligned_cols=144  Identities=17%  Similarity=0.071  Sum_probs=96.9

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-----HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-----LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      |+++||||+++||.+++++|+++|++|++++|+.+.     ++.+.+.....  ...++.++.+|++|++++.++     
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~-----   97 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH--IEGNMKLHYGDLTDSTCLVKI-----   97 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTTCHHHHHHH-----
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc--cCCCceEEEccCCCHHHHHHH-----
Confidence            789999999999999999999999999999997653     21111100000  013455566666666555544     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++..     ++|++||+||....
T Consensus        98 ---------------------------------------------------------~~~~-----~~d~vih~A~~~~~  115 (375)
T 1t2a_A           98 ---------------------------------------------------------INEV-----KPTEIYNLGAQSHV  115 (375)
T ss_dssp             ---------------------------------------------------------HHHH-----CCSEEEECCSCCCH
T ss_pred             ---------------------------------------------------------HHhc-----CCCEEEECCCcccc
Confidence                                                                     4433     57778888775432


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC-----------CCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA-----------PYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~-----------~~~~~Y~asK  265 (265)
                      .    .+.+++++.+++|+.++..+++++.+...++  .+++|++||.+.....           .....|+.||
T Consensus       116 ~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  184 (375)
T 1t2a_A          116 K----ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN--SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK  184 (375)
T ss_dssp             H----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             c----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCc--cceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHH
Confidence            1    2346678899999999999999998765421  3799999997664321           2345687765

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.59  E-value=5.5e-15  Score=131.74  Aligned_cols=126  Identities=17%  Similarity=0.109  Sum_probs=91.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |+++||||+++||.+++++|+++|++|++++|+. +..+...+.+..    ..++.++.+|++|++++.++         
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~----~~~~~~~~~Dl~d~~~~~~~---------   68 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS----LGNFEFVHGDIRNKNDVTRL---------   68 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT----TCCCEEEECCTTCHHHHHHH---------
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc----CCceEEEEcCCCCHHHHHHH---------
Confidence            4799999999999999999999999999999854 222222222221    13566777888877766655         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++.     .++|++||+||....    
T Consensus        69 -----------------------------------------------------~~~-----~~~d~vih~A~~~~~----   86 (347)
T 1orr_A           69 -----------------------------------------------------ITK-----YMPDSCFHLAGQVAM----   86 (347)
T ss_dssp             -----------------------------------------------------HHH-----HCCSEEEECCCCCCH----
T ss_pred             -----------------------------------------------------Hhc-----cCCCEEEECCcccCh----
Confidence                                                                 332     257777777775321    


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      +.+.+++++.+++|+.++..+++++.+.+.    ++++|++||.+.
T Consensus        87 ~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v  128 (347)
T 1orr_A           87 TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKV  128 (347)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGG
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHH
Confidence            223457788999999999999999988652    369999999764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.59  E-value=1.3e-15  Score=135.51  Aligned_cols=128  Identities=20%  Similarity=0.112  Sum_probs=95.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEE-eecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL-TLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++++++||||+++||..++++|+++|++|++++|+.+..+.+.+.+....  +.++.++ .+|++|++++.++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~-----   80 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY--PGRFETAVVEDMLKQGAYDEV-----   80 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS--TTTEEEEECSCTTSTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC--CCceEEEEecCCcChHHHHHH-----
Confidence            4678999999999999999999999999999999998776655555443322  1356666 6788876654433     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               +       .++|++||+||....
T Consensus        81 ---------------------------------------------------------~-------~~~d~vih~A~~~~~   96 (342)
T 1y1p_A           81 ---------------------------------------------------------I-------KGAAGVAHIASVVSF   96 (342)
T ss_dssp             ---------------------------------------------------------T-------TTCSEEEECCCCCSC
T ss_pred             ---------------------------------------------------------H-------cCCCEEEEeCCCCCC
Confidence                                                                     2       257778888775432


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      .       +++++.+++|+.++..+++++.+.   .+ .+++|++||.+..
T Consensus        97 ~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~-~~~iv~~SS~~~~  136 (342)
T 1y1p_A           97 S-------NKYDEVVTPAIGGTLNALRAAAAT---PS-VKRFVLTSSTVSA  136 (342)
T ss_dssp             C-------SCHHHHHHHHHHHHHHHHHHHHTC---TT-CCEEEEECCGGGT
T ss_pred             C-------CCHHHHHHHHHHHHHHHHHHHHhC---CC-CcEEEEeccHHHh
Confidence            1       346789999999999999988762   22 5899999998765

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.59  E-value=5.3e-15  Score=132.16  Aligned_cols=142  Identities=18%  Similarity=0.207  Sum_probs=97.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc------HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN------LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +|+++||||+++||.+++++|+++|++|++++|+...      .++..+.+....  +.++.++.+|++|++++.++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~---   76 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRL---   76 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHH---
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHH---
Confidence            5789999999999999999999999999999986543      222222222211  13566677777777665555   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 +++    . ++|++||+||..
T Consensus        77 -----------------------------------------------------------~~~----~-~~d~vih~A~~~   92 (348)
T 1ek6_A           77 -----------------------------------------------------------FKK----Y-SFMAVIHFAGLK   92 (348)
T ss_dssp             -----------------------------------------------------------HHH----C-CEEEEEECCSCC
T ss_pred             -----------------------------------------------------------HHh----c-CCCEEEECCCCc
Confidence                                                                       332    1 577777777754


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC------------CCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG------------APYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~------------~~~~~~Y~asK  265 (265)
                      ....    +.+++++.+++|+.++..+++++.    +.+ .+++|++||.+..-.            .|....|+.||
T Consensus        93 ~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK  161 (348)
T 1ek6_A           93 AVGE----SVQKPLDYYRVNLTGTIQLLEIMK----AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (348)
T ss_dssp             CHHH----HHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             Cccc----hhhchHHHHHHHHHHHHHHHHHHH----HhC-CCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHH
Confidence            3221    345678899999999999988643    233 579999999765421            12356788776

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.59  E-value=5.2e-15  Score=132.77  Aligned_cols=145  Identities=14%  Similarity=0.062  Sum_probs=99.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHH-HHHHHHHHhCC-CCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE-RVKNLCVQAGA-HPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .+++++++||||+++||..++++|+++|++|++++|+..... .+.+....... ...++.++.+|++|++++.++    
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~----   99 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA----   99 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH----
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHH----
Confidence            456789999999999999999999999999999999765322 22211111100 013566677777776655544    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++       ++|++||+||...
T Consensus       100 ----------------------------------------------------------~~-------~~d~vih~A~~~~  114 (352)
T 1sb8_A          100 ----------------------------------------------------------CA-------GVDYVLHQAALGS  114 (352)
T ss_dssp             ----------------------------------------------------------HT-------TCSEEEECCSCCC
T ss_pred             ----------------------------------------------------------hc-------CCCEEEECCcccC
Confidence                                                                      32       5677777777542


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC-----------CCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP-----------YSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~-----------~~~~Y~asK  265 (265)
                      ..    .+.+++++.+++|+.++..+++++.+.    + .+++|++||.+...+.+           ....|+.||
T Consensus       115 ~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  181 (352)
T 1sb8_A          115 VP----RSINDPITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTK  181 (352)
T ss_dssp             HH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHH
T ss_pred             ch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHH
Confidence            21    134678899999999999999988652    2 57999999987654332           245677765

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.58  E-value=2.3e-15  Score=135.76  Aligned_cols=134  Identities=22%  Similarity=0.188  Sum_probs=88.0

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHH--cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSK--CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .++++|+++||||+++||.+++++|++  .|++|++++|+.+............              ....        
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~--------   63 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSL--------------GHFK--------   63 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCC--------------CCGG--------
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhh--------------hhhh--------
Confidence            367899999999999999999999999  8999999999765221110000000              0000        


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                          ......+..+.+|++|+++++++      ...++|++||+||..
T Consensus        64 ------------------------------------~~~~~~~~~~~~Dl~d~~~~~~~------~~~~~D~vih~A~~~  101 (362)
T 3sxp_A           64 ------------------------------------NLIGFKGEVIAADINNPLDLRRL------EKLHFDYLFHQAAVS  101 (362)
T ss_dssp             ------------------------------------GGTTCCSEEEECCTTCHHHHHHH------TTSCCSEEEECCCCC
T ss_pred             ------------------------------------hccccCceEEECCCCCHHHHHHh------hccCCCEEEECCccC
Confidence                                                00012334455555555555443      345788888888843


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      .      .+.+++++.+++|+.++..+++++..    .  ++++|++||.+.
T Consensus       102 ~------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~--~~~~V~~SS~~v  141 (362)
T 3sxp_A          102 D------TTMLNQELVMKTNYQAFLNLLEIARS----K--KAKVIYASSAGV  141 (362)
T ss_dssp             G------GGCCCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGG
T ss_pred             C------ccccCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEeCcHHH
Confidence            2      24567889999999999999998732    2  356999999543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.58  E-value=4.1e-15  Score=132.26  Aligned_cols=139  Identities=14%  Similarity=0.069  Sum_probs=96.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCC--cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCG--AKLVLSARSSS--NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ++++++||||+++||.+++++|+++|  ++|++++|+..  ..+.+.+    .. ...++.++.+|++|++++.++    
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~Dl~d~~~~~~~----   72 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKD----LE-DDPRYTFVKGDVADYELVKEL----   72 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTT----TT-TCTTEEEEECCTTCHHHHHHH----
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhh----hc-cCCceEEEEcCCCCHHHHHHH----
Confidence            45679999999999999999999986  89999998642  2222111    11 124566777777777665554    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                +       +++|++||+||...
T Consensus        73 ----------------------------------------------------------~-------~~~d~vih~A~~~~   87 (336)
T 2hun_A           73 ----------------------------------------------------------V-------RKVDGVVHLAAESH   87 (336)
T ss_dssp             ----------------------------------------------------------H-------HTCSEEEECCCCCC
T ss_pred             ----------------------------------------------------------h-------hCCCEEEECCCCcC
Confidence                                                                      3       35677777777542


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-----------CCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-----------GAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-----------~~~~~~~Y~asK  265 (265)
                      .    +.+.+++++.+++|+.++..+++++.+.    +..+++|++||.+..-           +.+....|+.||
T Consensus        88 ~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK  155 (336)
T 2hun_A           88 V----DRSISSPEIFLHSNVIGTYTLLESIRRE----NPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATK  155 (336)
T ss_dssp             H----HHHHHCTHHHHHHHHHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHH
T ss_pred             h----hhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHH
Confidence            1    2334567889999999999999999876    2147999999975321           233456788776

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.57  E-value=2e-15  Score=126.77  Aligned_cols=121  Identities=17%  Similarity=0.316  Sum_probs=92.4

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCC-hHHHHHHHHHHHHHhCC
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ-TKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~  126 (265)
                      .++||||+++||.+++++|+++|++|++++|+++..++.           .++.++.+|++| ++++.++          
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~----------   60 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----------NNVKAVHFDVDWTPEEMAKQ----------   60 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----------TTEEEEECCTTSCHHHHHTT----------
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----------CCceEEEecccCCHHHHHHH----------
Confidence            589999999999999999999999999999987654322           467788888888 7665544          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          +       .++|++||+||...      
T Consensus        61 ----------------------------------------------------~-------~~~d~vi~~ag~~~------   75 (219)
T 3dqp_A           61 ----------------------------------------------------L-------HGMDAIINVSGSGG------   75 (219)
T ss_dssp             ----------------------------------------------------T-------TTCSEEEECCCCTT------
T ss_pred             ----------------------------------------------------H-------cCCCEEEECCcCCC------
Confidence                                                                1       24677777777543      


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCC-------CCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY-------SGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~-------~~~Y~asK  265 (265)
                            .+.+++|+.++..+++++.    +.+ .+++|++||..+..+.+.       ...|+.+|
T Consensus        76 ------~~~~~~n~~~~~~l~~a~~----~~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK  130 (219)
T 3dqp_A           76 ------KSLLKVDLYGAVKLMQAAE----KAE-VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAK  130 (219)
T ss_dssp             ------SSCCCCCCHHHHHHHHHHH----HTT-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHH
T ss_pred             ------CCcEeEeHHHHHHHHHHHH----HhC-CCEEEEECcccccCCCcccccccccccHHHHHH
Confidence                  2278899999998888763    333 579999999888776555       56777765

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.56  E-value=4.2e-15  Score=133.47  Aligned_cols=127  Identities=20%  Similarity=0.218  Sum_probs=90.6

Q ss_pred             EEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCC--CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          48 VVWITGASSGIGEALALQLSKC-GAKLVLSARSS--SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .++||||+++||.+++++|++. |++|++++|+.  +..+.+.+    .. ...++.++.+|++|++++.++        
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~Dl~d~~~~~~~--------   68 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD----IS-ESNRYNFEHADICDSAEITRI--------   68 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT----TT-TCTTEEEEECCTTCHHHHHHH--------
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhh----hh-cCCCeEEEECCCCCHHHHHHH--------
Confidence            4899999999999999999998 79999999865  22322211    11 124566777777777666555        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            +++     +++|++||+||....   
T Consensus        69 ------------------------------------------------------~~~-----~~~d~vih~A~~~~~---   86 (361)
T 1kew_A           69 ------------------------------------------------------FEQ-----YQPDAVMHLAAESHV---   86 (361)
T ss_dssp             ------------------------------------------------------HHH-----HCCSEEEECCSCCCH---
T ss_pred             ------------------------------------------------------Hhh-----cCCCEEEECCCCcCh---
Confidence                                                                  332     257777777775431   


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh----cCCceEEEEcccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAR----EQGGHLVVTSSIA  250 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~----~~~g~IV~isS~a  250 (265)
                       +.+.+++++.+++|+.++..+++++.+.|...    +.+|++|++||.+
T Consensus        87 -~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~  135 (361)
T 1kew_A           87 -DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE  135 (361)
T ss_dssp             -HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG
T ss_pred             -hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHH
Confidence             23446778999999999999999999987431    1126999999965

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.56  E-value=3.2e-14  Score=129.64  Aligned_cols=133  Identities=17%  Similarity=0.143  Sum_probs=87.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHH-----------------HHHHHHHHhCCCCCcEEEEeec
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE-----------------RVKNLCVQAGAHPQSIYTLTLD  106 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~D  106 (265)
                      ..++.++||||+|.||.+++++|+++|++|++++|+.....                 .+.+.....   ..++.++.+|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~v~~~~~D   85 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT---GKSIELYVGD   85 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH---CCCCEEEESC
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc---CCceEEEECC
Confidence            46789999999999999999999999999999988543211                 111110001   1234445555


Q ss_pred             CCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc
Q psy9256         107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF  186 (265)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~  186 (265)
                      ++|++++.++                                                              ++..    
T Consensus        86 l~d~~~~~~~--------------------------------------------------------------~~~~----   99 (404)
T 1i24_A           86 ICDFEFLAES--------------------------------------------------------------FKSF----   99 (404)
T ss_dssp             TTSHHHHHHH--------------------------------------------------------------HHHH----
T ss_pred             CCCHHHHHHH--------------------------------------------------------------Hhcc----
Confidence            5555444433                                                              5443    


Q ss_pred             ccccEEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         187 GCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       187 g~ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                       ++|++||+||....... ..+++++++.+++|+.|+..+++++.+.    +.++++|++||.+.
T Consensus       100 -~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~v  158 (404)
T 1i24_A          100 -EPDSVVHFGEQRSAPYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGE  158 (404)
T ss_dssp             -CCSEEEECCSCCCHHHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGG
T ss_pred             -CCCEEEECCCCCCccch-hhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHHH
Confidence             57888888886533222 2356778889999999999999987653    21259999999754

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.56  E-value=2e-14  Score=128.03  Aligned_cols=140  Identities=18%  Similarity=0.186  Sum_probs=92.7

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      +++||||+++||.+++++|+++|++|++++|......+..+.+....  +.++.++.+|++|++++.++           
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~-----------   68 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEI-----------   68 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHH-----------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHH-----------
Confidence            58999999999999999999999999998875432222222222211  13456677777777665555           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         ++.     .++|++||+||......    
T Consensus        69 ---------------------------------------------------~~~-----~~~D~vih~A~~~~~~~----   88 (338)
T 1udb_A           69 ---------------------------------------------------LHD-----HAIDTVIHFAGLKAVGE----   88 (338)
T ss_dssp             ---------------------------------------------------HHH-----TTCSEEEECCSCCCHHH----
T ss_pred             ---------------------------------------------------hhc-----cCCCEEEECCccCcccc----
Confidence                                                               332     14677777777542211    


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC-----------C-CCCCccccCC
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG-----------A-PYSGSYTDHL  265 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~-----------~-~~~~~Y~asK  265 (265)
                      ..+++++.+++|+.++..+++++    .+.+ .+++|++||.+..-.           . |....|++||
T Consensus        89 ~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK  153 (338)
T 1udb_A           89 SVQKPLEYYDNNVNGTLRLISAM----RAAN-VKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSK  153 (338)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHH----HHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHH
T ss_pred             chhcHHHHHHHHHHHHHHHHHHH----HhcC-CCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHH
Confidence            22445778999999999988754    3333 579999999765321           1 2356788776

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.54  E-value=2.2e-14  Score=128.26  Aligned_cols=119  Identities=13%  Similarity=0.070  Sum_probs=85.9

Q ss_pred             hhhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          38 NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        38 ~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      ..++.+.++|+++||||+++||..++++|+++|++|++++|+.+.               .++.++.+|++|++++.++ 
T Consensus        11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~~~~~~-   74 (347)
T 4id9_A           11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQALSDA-   74 (347)
T ss_dssp             ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHHHHHHH-
T ss_pred             CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHHHHHHH-
Confidence            345567889999999999999999999999999999999998754               2466778888887766555 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   +       .++|++||+||
T Consensus        75 -------------------------------------------------------------~-------~~~d~vih~A~   86 (347)
T 4id9_A           75 -------------------------------------------------------------I-------MGVSAVLHLGA   86 (347)
T ss_dssp             -------------------------------------------------------------H-------TTCSEEEECCC
T ss_pred             -------------------------------------------------------------H-------hCCCEEEECCc
Confidence                                                                         2       15777777777


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      ...      .+.+++++.+++|+.++..+++++..    .+ .+++|++||.+.
T Consensus        87 ~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~V~~SS~~v  129 (347)
T 4id9_A           87 FMS------WAPADRDRMFAVNVEGTRRLLDAASA----AG-VRRFVFASSGEV  129 (347)
T ss_dssp             CCC------SSGGGHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGG
T ss_pred             ccC------cchhhHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEECCHHH
Confidence            432      33455689999999999998887744    22 579999999644

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.54  E-value=2.6e-14  Score=127.99  Aligned_cols=134  Identities=13%  Similarity=0.043  Sum_probs=95.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCC--CCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAH--PQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..+++|+++||||++.||..++++|+++|++|++++|+..........+......  ..++.++.+|++|++++.++   
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---   97 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV---   97 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH---
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH---
Confidence            3467899999999999999999999999999999999876554444443332110  03567777777777665544   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++       ++|++||+||..
T Consensus        98 -----------------------------------------------------------~~-------~~d~Vih~A~~~  111 (351)
T 3ruf_A           98 -----------------------------------------------------------MK-------GVDHVLHQAALG  111 (351)
T ss_dssp             -----------------------------------------------------------TT-------TCSEEEECCCCC
T ss_pred             -----------------------------------------------------------hc-------CCCEEEECCccC
Confidence                                                                       22       567777777753


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      ..    ..+.+++++.+++|+.++..+++++...    + .+++|++||.+..-
T Consensus       112 ~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vyg  156 (351)
T 3ruf_A          112 SV----PRSIVDPITTNATNITGFLNILHAAKNA----Q-VQSFTYAASSSTYG  156 (351)
T ss_dssp             CH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGT
T ss_pred             Cc----chhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEecHHhcC
Confidence            22    1234567788999999999998877442    2 47999999986553

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.54  E-value=8.9e-15  Score=129.07  Aligned_cols=126  Identities=17%  Similarity=0.148  Sum_probs=70.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||+++||.+++++|+++|++|++++|+.+.           .    +  ++.+|++|++++.++         
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~----~--~~~~Dl~d~~~~~~~---------   55 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P----K--FEQVNLLDSNAVHHI---------   55 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHH---------
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C----C--eEEecCCCHHHHHHH---------
Confidence            6789999999999999999999999999999986532           0    1  466788887766555         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++..     ++|++||+||....    
T Consensus        56 -----------------------------------------------------~~~~-----~~d~vih~A~~~~~----   73 (315)
T 2ydy_A           56 -----------------------------------------------------IHDF-----QPHVIVHCAAERRP----   73 (315)
T ss_dssp             -----------------------------------------------------HHHH-----CCSEEEECC---------
T ss_pred             -----------------------------------------------------HHhh-----CCCEEEECCcccCh----
Confidence                                                                 3322     46777777775432    


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC----------CCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG----------APYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~----------~~~~~~Y~asK  265 (265)
                      +.+.+++++.+++|+.++..+++++.+.      ++++|++||.+...+          ......|+.||
T Consensus        74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK  137 (315)
T 2ydy_A           74 DVVENQPDAASQLNVDASGNLAKEAAAV------GAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTK  137 (315)
T ss_dssp             --------------CHHHHHHHHHHHHH------TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHH
Confidence            1245678899999999999999988762      259999999876543          23345687765

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.53  E-value=2.8e-14  Score=126.79  Aligned_cols=132  Identities=14%  Similarity=-0.001  Sum_probs=90.2

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .-+++.++||||+++||.+++++|+++|++|++++|+.+.....  .+.... ...++.++.+|++|++++.++      
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~-~~~~~~~~~~Dl~d~~~~~~~------   81 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRW--RLRELG-IEGDIQYEDGDMADACSVQRA------   81 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCH--HHHHTT-CGGGEEEEECCTTCHHHHHHH------
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccccc--chhhcc-ccCceEEEECCCCCHHHHHHH------
Confidence            34678899999999999999999999999999999986542211  111111 124566777777777766655      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++..     ++|++||+||.....
T Consensus        82 --------------------------------------------------------~~~~-----~~d~Vih~A~~~~~~  100 (335)
T 1rpn_A           82 --------------------------------------------------------VIKA-----QPQEVYNLAAQSFVG  100 (335)
T ss_dssp             --------------------------------------------------------HHHH-----CCSEEEECCSCCCHH
T ss_pred             --------------------------------------------------------HHHc-----CCCEEEECccccchh
Confidence                                                                    4332     567777777753221


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                          .+.+++++.+++|+.++..+++++.+.    +..+++|++||.+..
T Consensus       101 ----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~  142 (335)
T 1rpn_A          101 ----ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMF  142 (335)
T ss_dssp             ----HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGG
T ss_pred             ----hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHh
Confidence                123456889999999999999987653    213799999997654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.53  E-value=4.4e-15  Score=128.37  Aligned_cols=126  Identities=18%  Similarity=0.147  Sum_probs=94.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      .|+++||||+++||.+++++|+++|++|++++|+++...            ..++.++.+|++|++++.++         
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~---------   60 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------------EAHEEIVACDLADAQAVHDL---------   60 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC------------CTTEEECCCCTTCHHHHHHH---------
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc------------CCCccEEEccCCCHHHHHHH---------
Confidence            368999999999999999999999999999999865321            12456777888877665554         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++       ++|++||+||..      
T Consensus        61 -----------------------------------------------------~~-------~~d~vi~~a~~~------   74 (267)
T 3ay3_A           61 -----------------------------------------------------VK-------DCDGIIHLGGVS------   74 (267)
T ss_dssp             -----------------------------------------------------HT-------TCSEEEECCSCC------
T ss_pred             -----------------------------------------------------Hc-------CCCEEEECCcCC------
Confidence                                                                 22       467788877754      


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC------------CCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP------------YSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~------------~~~~Y~asK  265 (265)
                        +.+++++.+++|+.++..+++++.+    .+ .+++|++||.+...+.+            ....|+.||
T Consensus        75 --~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  139 (267)
T 3ay3_A           75 --VERPWNDILQANIIGAYNLYEAARN----LG-KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSK  139 (267)
T ss_dssp             --SCCCHHHHHHHTHHHHHHHHHHHHH----TT-CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHH
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHH
Confidence              2345788999999999999998764    22 57999999987654322            236687765

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.53  E-value=3e-14  Score=126.83  Aligned_cols=121  Identities=17%  Similarity=0.099  Sum_probs=85.5

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      ++++||||+++||.+++++|+++|++|++++|+++..+++..         .++.++.+|++|++++.++          
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---------~~~~~~~~Dl~d~~~~~~~----------   74 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY---------LEPECRVAEMLDHAGLERA----------   74 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG---------GCCEEEECCTTCHHHHHHH----------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc---------CCeEEEEecCCCHHHHHHH----------
Confidence            379999999999999999999999999999998776543211         2466778888887665554          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          +       .++|++||+||...      
T Consensus        75 ----------------------------------------------------~-------~~~d~vih~a~~~~------   89 (342)
T 2x4g_A           75 ----------------------------------------------------L-------RGLDGVIFSAGYYP------   89 (342)
T ss_dssp             ----------------------------------------------------T-------TTCSEEEEC-----------
T ss_pred             ----------------------------------------------------H-------cCCCEEEECCccCc------
Confidence                                                                2       24677777777432      


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP  256 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~  256 (265)
                      .+.+++++.+++|+.++..+++++.+.    + .+++|++||.+...+.+
T Consensus        90 ~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~  134 (342)
T 2x4g_A           90 SRPRRWQEEVASALGQTNPFYAACLQA----R-VPRILYVGSAYAMPRHP  134 (342)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHH----T-CSCEEEECCGGGSCCCT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEECCHHhhCcCC
Confidence            223567889999999999999988763    2 47999999987765433

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.53  E-value=5.9e-15  Score=130.35  Aligned_cols=128  Identities=13%  Similarity=0.112  Sum_probs=82.1

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec-CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSAR-SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ||+++||||+++||.+++++|+++|++|+++.| +++..++... +.+......++.++.+|++|++++.++        
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~--------   71 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSF-LTNLPGASEKLHFFNADLSNPDSFAAA--------   71 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHH-HHTSTTHHHHEEECCCCTTCGGGGHHH--------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHH-HHhhhccCCceEEEecCCCCHHHHHHH--------
Confidence            688999999999999999999999999999888 5432111111 111100012345555666665554433        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++       .+|++||+|+..     
T Consensus        72 ------------------------------------------------------~~-------~~d~vih~A~~~-----   85 (322)
T 2p4h_X           72 ------------------------------------------------------IE-------GCVGIFHTASPI-----   85 (322)
T ss_dssp             ------------------------------------------------------HT-------TCSEEEECCCCC-----
T ss_pred             ------------------------------------------------------Hc-------CCCEEEEcCCcc-----
Confidence                                                                  32       468888888632     


Q ss_pred             cccchH-HHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         205 EDIELE-VDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       205 ~~~~~~-~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                       +.+.+ .+++.+++|+.|+..+++++.+..   + .+++|++||.++..
T Consensus        86 -~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~-~~~iV~~SS~~~~~  130 (322)
T 2p4h_X           86 -DFAVSEPEEIVTKRTVDGALGILKACVNSK---T-VKRFIYTSSGSAVS  130 (322)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHTTCS---S-CCEEEEEEEGGGTS
T ss_pred             -cCCCCChHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeccHHHcc
Confidence             11112 245689999999999999887641   2 47999999987554

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.52  E-value=2.1e-14  Score=122.17  Aligned_cols=66  Identities=23%  Similarity=0.173  Sum_probs=50.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ..+..|+++||||++|||.+++++|+++| ++|++++|+++.+++.         ...++.++.+|++|++++.++
T Consensus        19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~---------~~~~~~~~~~Dl~d~~~~~~~   85 (236)
T 3qvo_A           19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP---------YPTNSQIIMGDVLNHAALKQA   85 (236)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS---------CCTTEEEEECCTTCHHHHHHH
T ss_pred             ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc---------ccCCcEEEEecCCCHHHHHHH
Confidence            34556899999999999999999999999 8999999987654331         124677788888887766655

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.52  E-value=2.9e-14  Score=127.02  Aligned_cols=130  Identities=19%  Similarity=0.234  Sum_probs=89.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ++|+++||||+++||..++++|+++|++|+++.|+.+..++.... .+......++.++.+|++|++++.++        
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~--------   74 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHL-LDLPKAETHLTLWKADLADEGSFDEA--------   74 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHH-HTSTTHHHHEEEEECCTTSTTTTHHH--------
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHH-HhcccCCCeEEEEEcCCCCHHHHHHH--------
Confidence            578999999999999999999999999999999987755443321 11110012456667777776654444        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            +       ..+|++||+|+..   ..
T Consensus        75 ------------------------------------------------------~-------~~~d~Vih~A~~~---~~   90 (337)
T 2c29_D           75 ------------------------------------------------------I-------KGCTGVFHVATPM---DF   90 (337)
T ss_dssp             ------------------------------------------------------H-------TTCSEEEECCCCC---CS
T ss_pred             ------------------------------------------------------H-------cCCCEEEEecccc---CC
Confidence                                                                  3       1468888888743   11


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      ..  .+..++.+++|+.++..+++++.+..    ..+++|++||.++..
T Consensus        91 ~~--~~~~~~~~~~nv~gt~~ll~a~~~~~----~~~riV~~SS~~~~~  133 (337)
T 2c29_D           91 ES--KDPENEVIKPTIEGMLGIMKSCAAAK----TVRRLVFTSSAGTVN  133 (337)
T ss_dssp             SC--SSHHHHTHHHHHHHHHHHHHHHHHHS----CCCEEEEECCGGGTS
T ss_pred             CC--CChHHHHHHHHHHHHHHHHHHHHhCC----CccEEEEeeeHhhcc
Confidence            11  12345789999999999999887642    147999999987544

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.52  E-value=1.8e-14  Score=133.02  Aligned_cols=129  Identities=17%  Similarity=0.135  Sum_probs=87.6

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc---HHHHHHHHHHhCC------CCCcEEEEeecCCCh
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN---LERVKNLCVQAGA------HPQSIYTLTLDVTQT  110 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~------~~~~~~~~~~D~~~~  110 (265)
                      .+....+++++||||+++||.+++++|++.|++|++++|+++.   .+++.+.+.....      ...++.++.+|++|+
T Consensus        63 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  142 (427)
T 4f6c_A           63 SLSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  142 (427)
T ss_dssp             SSCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred             cCCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence            3445678899999999999999999999999999999999873   3333333322210      013455555555554


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccccc
Q psy9256         111 KYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  190 (265)
Q Consensus       111 ~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ld  190 (265)
                      +                                                              ++.        ..+++|
T Consensus       143 ~--------------------------------------------------------------~l~--------~~~~~d  152 (427)
T 4f6c_A          143 D--------------------------------------------------------------DVV--------LPENMD  152 (427)
T ss_dssp             C--------------------------------------------------------------CCC--------CSSCCS
T ss_pred             c--------------------------------------------------------------cCC--------CcCCCC
Confidence            3                                                              332        346778


Q ss_pred             EEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         191 ILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       191 ilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      ++||+||...       ..+++++.+++|+.++..+++++.+     + .+++|++||...
T Consensus       153 ~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~-~~~~v~~SS~~~  200 (427)
T 4f6c_A          153 TIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISV  200 (427)
T ss_dssp             EEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----T-TCEEEEEEEGGG
T ss_pred             EEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----c-CCcEEEECchHh
Confidence            8888877542       2356788999999999999998876     2 479999999876

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.50  E-value=5.7e-14  Score=121.15  Aligned_cols=123  Identities=22%  Similarity=0.149  Sum_probs=91.4

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      +++||||+++||.+++++|+ +|++|++++|+++. +         .    +   +.+|++|++++.++           
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~---------~----~---~~~Dl~~~~~~~~~-----------   52 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q---------G----G---YKLDLTDFPRLEDF-----------   52 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T---------T----C---EECCTTSHHHHHHH-----------
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C---------C----C---ceeccCCHHHHHHH-----------
Confidence            58999999999999999999 48999999998642 0         0    1   67888888776666           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         ++..     ++|++||+||....    +.
T Consensus        53 ---------------------------------------------------~~~~-----~~d~vi~~a~~~~~----~~   72 (273)
T 2ggs_A           53 ---------------------------------------------------IIKK-----RPDVIINAAAMTDV----DK   72 (273)
T ss_dssp             ---------------------------------------------------HHHH-----CCSEEEECCCCCCH----HH
T ss_pred             ---------------------------------------------------HHhc-----CCCEEEECCcccCh----hh
Confidence                                                               3332     46777777775432    12


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC----------CCCccccCC
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP----------YSGSYTDHL  265 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~----------~~~~Y~asK  265 (265)
                      +.+++++.+++|+.++..+++++.+    .  ++++|++||.+...+.+          ....|++||
T Consensus        73 ~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK  134 (273)
T 2ggs_A           73 CEIEKEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSK  134 (273)
T ss_dssp             HHHCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHH
T ss_pred             hhhCHHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHH
Confidence            3467889999999999999998854    2  36999999988765433          245787776

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.50  E-value=2.6e-14  Score=117.95  Aligned_cols=63  Identities=24%  Similarity=0.217  Sum_probs=49.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ++++++||||+++||.+++++|+++|++|++++|+++..+..         ...++.++.+|++|++++.++
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~   64 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---------GPRPAHVVVGDVLQAADVDKT   64 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---------SCCCSEEEESCTTSHHHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc---------cCCceEEEEecCCCHHHHHHH
Confidence            347899999999999999999999999999999987654221         024567778888887665554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.49  E-value=4.3e-14  Score=125.87  Aligned_cols=126  Identities=15%  Similarity=0.199  Sum_probs=84.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|+++||||+++||..++++|+++|++|+++.|+.+..++.... .... ...++.++.+|++|++++.++         
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~---------   77 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHL-LELQ-ELGDLKIFRADLTDELSFEAP---------   77 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHH-HHHG-GGSCEEEEECCTTTSSSSHHH---------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHH-HhcC-CCCcEEEEecCCCChHHHHHH---------
Confidence            68899999999999999999999999999988876654322211 1111 113566677777776654444         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++       .+|++||+||...   ..
T Consensus        78 -----------------------------------------------------~~-------~~D~Vih~A~~~~---~~   94 (338)
T 2rh8_A           78 -----------------------------------------------------IA-------GCDFVFHVATPVH---FA   94 (338)
T ss_dssp             -----------------------------------------------------HT-------TCSEEEEESSCCC---C-
T ss_pred             -----------------------------------------------------Hc-------CCCEEEEeCCccC---CC
Confidence                                                                 21       3688888887431   11


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                        ..+..++.+++|+.|+..+++++.+..   + .+++|++||.++
T Consensus        95 --~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~r~V~~SS~~~  134 (338)
T 2rh8_A           95 --SEDPENDMIKPAIQGVVNVMKACTRAK---S-VKRVILTSSAAA  134 (338)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHCT---T-CCEEEEECCHHH
T ss_pred             --CCCcHHHHHHHHHHHHHHHHHHHHHcC---C-cCEEEEEecHHH
Confidence              112234589999999999999887642   1 479999999874

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.49  E-value=3.2e-14  Score=125.42  Aligned_cols=117  Identities=18%  Similarity=0.193  Sum_probs=83.6

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      +++||||+++||.+++++|+++|++|++++|..+...+.      .   ..++.++.+|++|++++.++           
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~------~---~~~~~~~~~Dl~~~~~~~~~-----------   61 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKREN------V---PKGVPFFRVDLRDKEGVERA-----------   61 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGG------S---CTTCCEECCCTTCHHHHHHH-----------
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhh------c---ccCeEEEECCCCCHHHHHHH-----------
Confidence            589999999999999999999999999998854321110      0   02345566777776665555           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         +++     .++|+++|+||....    ..
T Consensus        62 ---------------------------------------------------~~~-----~~~d~vi~~a~~~~~----~~   81 (311)
T 2p5y_A           62 ---------------------------------------------------FRE-----FRPTHVSHQAAQASV----KV   81 (311)
T ss_dssp             ---------------------------------------------------HHH-----HCCSEEEECCSCCCH----HH
T ss_pred             ---------------------------------------------------HHh-----cCCCEEEECccccCc----hh
Confidence                                                               332     256777777775322    12


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccc
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSI  249 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~  249 (265)
                      +.+++++.+++|+.++..+++++..    .+ .+++|++||.
T Consensus        82 ~~~~~~~~~~~N~~g~~~l~~a~~~----~~-~~~iv~~SS~  118 (311)
T 2p5y_A           82 SVEDPVLDFEVNLLGGLNLLEACRQ----YG-VEKLVFASTG  118 (311)
T ss_dssp             HHHCHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEH
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCCC
Confidence            3466788999999999999998753    22 4799999998

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.48  E-value=7.1e-14  Score=126.98  Aligned_cols=123  Identities=15%  Similarity=0.020  Sum_probs=89.2

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ..+++++||||+++||..++++|+++|++|++++|+.+......         ..++.++.+|++|++++.++       
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~v~~~~~Dl~d~~~~~~~-------   90 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED---------MFCDEFHLVDLRVMENCLKV-------   90 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG---------GTCSEEEECCTTSHHHHHHH-------
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc---------cCCceEEECCCCCHHHHHHH-------
Confidence            35689999999999999999999999999999999865432110         12456677777777665544       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             +       .++|++||+||......
T Consensus        91 -------------------------------------------------------~-------~~~d~Vih~A~~~~~~~  108 (379)
T 2c5a_A           91 -------------------------------------------------------T-------EGVDHVFNLAADMGGMG  108 (379)
T ss_dssp             -------------------------------------------------------H-------TTCSEEEECCCCCCCHH
T ss_pred             -------------------------------------------------------h-------CCCCEEEECceecCccc
Confidence                                                                   2       15677777777543211


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                         .+.+++++.+++|+.++..+++++..    .+ .+++|++||.+..
T Consensus       109 ---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~~V~~SS~~v~  149 (379)
T 2c5a_A          109 ---FIQSNHSVIMYNNTMISFNMIEAARI----NG-IKRFFYASSACIY  149 (379)
T ss_dssp             ---HHTTCHHHHHHHHHHHHHHHHHHHHH----TT-CSEEEEEEEGGGS
T ss_pred             ---ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEeehhee
Confidence               11356788999999999999998753    22 4799999997643

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.47  E-value=6.1e-14  Score=117.96  Aligned_cols=115  Identities=13%  Similarity=0.143  Sum_probs=84.0

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      ++++||||+++||..++++|+++|++|++++|+++..+..          ..++.++.+|++|++++.++          
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~Dl~d~~~~~~~----------   64 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE----------NEHLKVKKADVSSLDEVCEV----------   64 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC----------CTTEEEECCCTTCHHHHHHH----------
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc----------cCceEEEEecCCCHHHHHHH----------
Confidence            6799999999999999999999999999999987654321          14677788888887766555          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++       .+|++||+||....     
T Consensus        65 ----------------------------------------------------~~-------~~d~vi~~a~~~~~-----   80 (227)
T 3dhn_A           65 ----------------------------------------------------CK-------GADAVISAFNPGWN-----   80 (227)
T ss_dssp             ----------------------------------------------------HT-------TCSEEEECCCC--------
T ss_pred             ----------------------------------------------------hc-------CCCEEEEeCcCCCC-----
Confidence                                                                22       46777777764311     


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGA  255 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~  255 (265)
                           ..+.+++|+.++..+++++..    .+ .+++|++||.+...+.
T Consensus        81 -----~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~  119 (227)
T 3dhn_A           81 -----NPDIYDETIKVYLTIIDGVKK----AG-VNRFLMVGGAGSLFIA  119 (227)
T ss_dssp             --------CCSHHHHHHHHHHHHHHH----TT-CSEEEEECCSTTSEEE
T ss_pred             -----ChhHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCChhhccCC
Confidence                 123788999998888776643    33 4799999998765543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.47  E-value=3.3e-14  Score=127.78  Aligned_cols=129  Identities=12%  Similarity=0.141  Sum_probs=84.8

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      +.|..+++++++||||+++||.+++++|+++| ++|++++|+.+... . +   ...    ++. +.+|++++++++.+ 
T Consensus        39 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~-~---~~~----~~~-~~~d~~~~~~~~~~-  107 (357)
T 2x6t_A           39 GGGSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F-V---NLV----DLN-IADYMDKEDFLIQI-  107 (357)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-G-G---GTT----TSC-CSEEEEHHHHHHHH-
T ss_pred             cccccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-h-h---ccc----Cce-EeeecCcHHHHHHH-
Confidence            44566788999999999999999999999999 99999998765421 0 0   000    111 44565555544433 


Q ss_pred             HHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  197 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG  197 (265)
                                                                                   ++.  ..++++|++||+||
T Consensus       108 -------------------------------------------------------------~~~--~~~~~~d~Vih~A~  124 (357)
T 2x6t_A          108 -------------------------------------------------------------MAG--EEFGDVEAIFHEGA  124 (357)
T ss_dssp             -------------------------------------------------------------HTT--CCCSSCCEEEECCS
T ss_pred             -------------------------------------------------------------Hhh--cccCCCCEEEECCc
Confidence                                                                         332  12457888888888


Q ss_pred             ccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         198 RSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      ....      +.+++++.+++|+.++..+++++.+    .+ . ++|++||.+..-
T Consensus       125 ~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~-r~V~~SS~~v~g  168 (357)
T 2x6t_A          125 CSST------TEWDGKYMMDNNYQYSKELLHYCLE----RE-I-PFLYASSAATYG  168 (357)
T ss_dssp             CCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HT-C-CEEEEEEGGGGC
T ss_pred             ccCC------ccCCHHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEEcchHHhC
Confidence            6432      2346788999999999999998876    23 4 999999986543

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.47  E-value=1.6e-13  Score=121.58  Aligned_cols=121  Identities=17%  Similarity=0.247  Sum_probs=87.8

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      ++++||||+++||.+++++|+++|++|++++|+.....+      ..   ..++.++.+|++|++++.++          
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~---~~~~~~~~~D~~~~~~~~~~----------   62 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED------AI---TEGAKFYNGDLRDKAFLRDV----------   62 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG------GS---CTTSEEEECCTTCHHHHHHH----------
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh------hc---CCCcEEEECCCCCHHHHHHH----------
Confidence            579999999999999999999999999999987644321      01   12466677777777665555          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          +++     +++|++||+||.....    
T Consensus        63 ----------------------------------------------------~~~-----~~~d~vih~a~~~~~~----   81 (330)
T 2c20_A           63 ----------------------------------------------------FTQ-----ENIEAVMHFAADSLVG----   81 (330)
T ss_dssp             ----------------------------------------------------HHH-----SCEEEEEECCCCCCHH----
T ss_pred             ----------------------------------------------------Hhh-----cCCCEEEECCcccCcc----
Confidence                                                                332     3577777777754322    


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      .+.+++++.+++|+.++..+++++..    .+ .+++|++||.+..
T Consensus        82 ~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~  122 (330)
T 2c20_A           82 VSMEKPLQYYNNNVYGALCLLEVMDE----FK-VDKFIFSSTAATY  122 (330)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGG
T ss_pred             ccccCHHHHHHHHhHHHHHHHHHHHH----cC-CCEEEEeCCceee
Confidence            13456788999999999999887532    22 5799999997654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.46  E-value=3.7e-14  Score=124.78  Aligned_cols=130  Identities=17%  Similarity=0.080  Sum_probs=93.2

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      ++++||||+++||.+++++|+++|++|++++|+.+...+..         ..++.++.+|++|++ +.+.          
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dl~d~~-~~~~----------   60 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLKDYS-WGAG----------   60 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---------CTTSEEECCCTTSTT-TTTT----------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---------CCCceEEECccccHH-HHhh----------
Confidence            46999999999999999999999999999999776543221         235666777777765 3322          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          +       .. |++||+||..    ..+
T Consensus        61 ----------------------------------------------------~-------~~-d~vih~A~~~----~~~   76 (312)
T 3ko8_A           61 ----------------------------------------------------I-------KG-DVVFHFAANP----EVR   76 (312)
T ss_dssp             ----------------------------------------------------C-------CC-SEEEECCSSC----SSS
T ss_pred             ----------------------------------------------------c-------CC-CEEEECCCCC----Cch
Confidence                                                                1       12 7888888742    223


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC-----------CCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG-----------APYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~-----------~~~~~~Y~asK  265 (265)
                      .+.+++++.+++|+.++..+++++..    .+ .+++|++||.+..-.           ......|+.||
T Consensus        77 ~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK  141 (312)
T 3ko8_A           77 LSTTEPIVHFNENVVATFNVLEWARQ----TG-VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAK  141 (312)
T ss_dssp             GGGSCHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHH
Confidence            45567889999999999999997743    23 579999999765422           22346677765

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.46  E-value=7.4e-14  Score=123.14  Aligned_cols=130  Identities=18%  Similarity=0.143  Sum_probs=88.8

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |+++||||+++||.+++++|+++|..|++..|+....+..          ...+.++.+|+++ +++.++          
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~----------~~~~~~~~~Dl~~-~~~~~~----------   60 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV----------NEAARLVKADLAA-DDIKDY----------   60 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS----------CTTEEEECCCTTT-SCCHHH----------
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc----------CCCcEEEECcCCh-HHHHHH----------
Confidence            4799999999999999999999995555444444332211          2356677788777 554444          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          +       .++|++||+||..    ..+
T Consensus        61 ----------------------------------------------------~-------~~~d~vih~a~~~----~~~   77 (313)
T 3ehe_A           61 ----------------------------------------------------L-------KGAEEVWHIAANP----DVR   77 (313)
T ss_dssp             ----------------------------------------------------H-------TTCSEEEECCCCC----CCC
T ss_pred             ----------------------------------------------------h-------cCCCEEEECCCCC----Chh
Confidence                                                                2       2577778777742    223


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-----------CCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-----------GAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-----------~~~~~~~Y~asK  265 (265)
                      .+.+++++.+++|+.++..+++++.    +.+ .+++|++||.+..-           +......|+.||
T Consensus        78 ~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK  142 (313)
T 3ehe_A           78 IGAENPDEIYRNNVLATYRLLEAMR----KAG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASK  142 (313)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHH----HHT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHH----HcC-CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHH
Confidence            4557788999999999999988743    333 57999999976542           223345677765

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.46  E-value=2.2e-13  Score=113.67  Aligned_cols=55  Identities=16%  Similarity=0.268  Sum_probs=45.2

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (265)
                      .++||||+++||.+++++|+++|++|++++|+++..+++.          .++.++.+|++|+++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----------~~~~~~~~D~~d~~~   56 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH----------KDINILQKDIFDLTL   56 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC----------SSSEEEECCGGGCCH
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc----------CCCeEEeccccChhh
Confidence            4899999999999999999999999999999876544321          356778888887765

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.45  E-value=1.3e-13  Score=115.53  Aligned_cols=56  Identities=14%  Similarity=0.175  Sum_probs=45.0

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (265)
                      .++||||+++||.+++++|+++|++|++++|+++..+++.         ..++.++.+|++|+++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~~D~~d~~~   57 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL---------GATVATLVKEPLVLTE   57 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT---------CTTSEEEECCGGGCCH
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc---------CCCceEEecccccccH
Confidence            4899999999999999999999999999999865543221         1356777888887765

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.45  E-value=1.8e-13  Score=119.36  Aligned_cols=122  Identities=20%  Similarity=0.209  Sum_probs=89.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .-..++++||||+++||.+++++|+++|++|++++|+                        .+|++|++++.++      
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~Dl~d~~~~~~~------   58 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKF------   58 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHH------
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------------cCCCCCHHHHHHH------
Confidence            3456899999999999999999999999999999885                        2578877766655      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++..     ++|++||+||.... 
T Consensus        59 --------------------------------------------------------~~~~-----~~d~vih~A~~~~~-   76 (292)
T 1vl0_A           59 --------------------------------------------------------FNEK-----KPNVVINCAAHTAV-   76 (292)
T ss_dssp             --------------------------------------------------------HHHH-----CCSEEEECCCCCCH-
T ss_pred             --------------------------------------------------------HHhc-----CCCEEEECCccCCH-
Confidence                                                                    3322     56777777775322 


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCC-----------CCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAP-----------YSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~-----------~~~~Y~asK  265 (265)
                         +.+.+++++.+++|+.++..+++++.+    .+  .++|++||.+...+.+           ....|+.||
T Consensus        77 ---~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~--~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK  141 (292)
T 1vl0_A           77 ---DKCEEQYDLAYKINAIGPKNLAAAAYS----VG--AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTK  141 (292)
T ss_dssp             ---HHHHHCHHHHHHHHTHHHHHHHHHHHH----HT--CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHH
T ss_pred             ---HHHhcCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHH
Confidence               223467889999999999999998765    23  4999999986543322           245677765

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.45  E-value=1.1e-13  Score=125.56  Aligned_cols=127  Identities=13%  Similarity=0.053  Sum_probs=90.2

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ...+++++++||||+++||..++++|+++| ++|++++|+.+...+...       ...++.++.+|++|++++.++   
T Consensus        27 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~-------~~~~v~~~~~Dl~d~~~l~~~---   96 (377)
T 2q1s_A           27 ASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-------DHPAVRFSETSITDDALLASL---   96 (377)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC-------CCTTEEEECSCTTCHHHHHHC---
T ss_pred             hHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc-------CCCceEEEECCCCCHHHHHHH---
Confidence            345788999999999999999999999999 999999997654321100       124577777888877655444   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 +       .++|++||+||..
T Consensus        97 -----------------------------------------------------------~-------~~~d~Vih~A~~~  110 (377)
T 2q1s_A           97 -----------------------------------------------------------Q-------DEYDYVFHLATYH  110 (377)
T ss_dssp             -----------------------------------------------------------C-------SCCSEEEECCCCS
T ss_pred             -----------------------------------------------------------h-------hCCCEEEECCCcc
Confidence                                                                       1       2567777777754


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      ...    .+.+++++.+++|+.++..+++++..    ..+.+++|++||.+.
T Consensus       111 ~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~v  154 (377)
T 2q1s_A          111 GNQ----SSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCS  154 (377)
T ss_dssp             CHH----HHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC--
T ss_pred             Cch----hhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHH
Confidence            221    23456788999999999998887632    212479999999753

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.44  E-value=3.1e-13  Score=132.21  Aligned_cols=132  Identities=17%  Similarity=0.175  Sum_probs=88.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+++|+++||||+++||.+++++|+++|++|++++|+.+...+..+.+....  ..++.++.+|++|++++.++     
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~-----   79 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKV-----   79 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHH-----
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHH-----
Confidence            34678999999999999999999999999999999987654333322222221  13456677777777665555     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               +++.     ++|++||+||....
T Consensus        80 ---------------------------------------------------------~~~~-----~~D~Vih~A~~~~~   97 (699)
T 1z45_A           80 ---------------------------------------------------------FKEY-----KIDSVIHFAGLKAV   97 (699)
T ss_dssp             ---------------------------------------------------------HHHS-----CCCEEEECCSCCCH
T ss_pred             ---------------------------------------------------------HHhC-----CCCEEEECCcccCc
Confidence                                                                     3321     56777777775432


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      ...    .++.++.+++|+.++..+++++    .+.+ .+++|++||.+.
T Consensus        98 ~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~~~iV~~SS~~v  138 (699)
T 1z45_A           98 GES----TQIPLRYYHNNILGTVVLLELM----QQYN-VSKFVFSSSATV  138 (699)
T ss_dssp             HHH----HHSHHHHHHHHHHHHHHHHHHH----HHHT-CCEEEEEEEGGG
T ss_pred             Ccc----ccCHHHHHHHHHHHHHHHHHHH----HHcC-CCEEEEECcHHH
Confidence            211    1234567899999999887654    3333 589999999764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.44  E-value=1.5e-13  Score=122.67  Aligned_cols=132  Identities=16%  Similarity=0.165  Sum_probs=84.0

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCC--cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCG--AKLVLSARSSS--NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      +..+++++++||||+++||..++++|+++|  .+|+..+|+..  ..+.+    .... ...++.++.+|++|++++.++
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l----~~~~-~~~~~~~~~~Dl~d~~~~~~~   93 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNV----KSIQ-DHPNYYFVKGEIQNGELLEHV   93 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGG----TTTT-TCTTEEEEECCTTCHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhh----hhhc-cCCCeEEEEcCCCCHHHHHHH
Confidence            345678999999999999999999999999  66777776532  11111    1111 124566677777777665555


Q ss_pred             HHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecc
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA  196 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnA  196 (265)
                                                                                    ++.     .++|++||+|
T Consensus        94 --------------------------------------------------------------~~~-----~~~d~Vih~A  106 (346)
T 4egb_A           94 --------------------------------------------------------------IKE-----RDVQVIVNFA  106 (346)
T ss_dssp             --------------------------------------------------------------HHH-----HTCCEEEECC
T ss_pred             --------------------------------------------------------------Hhh-----cCCCEEEECC
Confidence                                                                          433     1477788877


Q ss_pred             cccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         197 GRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       197 G~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      |.....    .+.+++++.+++|+.++..+++++...    + .+++|++||.+..-
T Consensus       107 ~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vy~  154 (346)
T 4egb_A          107 AESHVD----RSIENPIPFYDTNVIGTVTLLELVKKY----P-HIKLVQVSTDEVYG  154 (346)
T ss_dssp             CCC-------------CHHHHHHTHHHHHHHHHHHHS----T-TSEEEEEEEGGGGC
T ss_pred             cccchh----hhhhCHHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeCchHHhC
Confidence            764322    234567889999999999988877542    2 57899999975543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.43  E-value=4.7e-14  Score=117.41  Aligned_cols=124  Identities=16%  Similarity=0.113  Sum_probs=91.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++++||||+++||.+++++|+++|+  +|++++|+++.             ...++.++.+|++|++++.++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-------------~~~~~~~~~~D~~~~~~~~~~------   64 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------------EHPRLDNPVGPLAELLPQLDG------   64 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------------CCTTEECCBSCHHHHGGGCCS------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-------------cCCCceEEeccccCHHHHHHh------
Confidence            468899999999999999999999998  99999998764             013566666776665543322      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              +         +|++||+||.... 
T Consensus        65 --------------------------------------------------------~---------~d~vi~~a~~~~~-   78 (215)
T 2a35_A           65 --------------------------------------------------------S---------IDTAFCCLGTTIK-   78 (215)
T ss_dssp             --------------------------------------------------------C---------CSEEEECCCCCHH-
T ss_pred             --------------------------------------------------------h---------hcEEEECeeeccc-
Confidence                                                                    1         6777777775422 


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                           +.+++++.+++|+.++..+++++.+    .+ .+++|++||.....+  ....|+.+|
T Consensus        79 -----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~--~~~~y~~sK  129 (215)
T 2a35_A           79 -----EAGSEEAFRAVDFDLPLAVGKRALE----MG-ARHYLVVSALGADAK--SSIFYNRVK  129 (215)
T ss_dssp             -----HHSSHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCCTT--CSSHHHHHH
T ss_pred             -----cCCCHHHHHHhhHHHHHHHHHHHHH----cC-CCEEEEECCcccCCC--CccHHHHHH
Confidence                 1356788899999999998887654    22 579999999876542  345687765

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.43  E-value=4.1e-13  Score=121.17  Aligned_cols=126  Identities=17%  Similarity=0.181  Sum_probs=89.8

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCC-ChHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT-QTKYHRRC  116 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~  116 (265)
                      ..|..|++++++||||++.||..++++|+++ |++|++++|+.+..+.+..        ..++.++.+|++ |.+++.++
T Consensus        17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--------~~~v~~~~~Dl~~d~~~~~~~   88 (372)
T 3slg_A           17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK--------HERMHFFEGDITINKEWVEYH   88 (372)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG--------STTEEEEECCTTTCHHHHHHH
T ss_pred             cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc--------CCCeEEEeCccCCCHHHHHHH
Confidence            3455678899999999999999999999998 9999999998766544322        246777888888 77666555


Q ss_pred             HHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecc
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA  196 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnA  196 (265)
                                                                                    ++       ++|++||+|
T Consensus        89 --------------------------------------------------------------~~-------~~d~Vih~A   99 (372)
T 3slg_A           89 --------------------------------------------------------------VK-------KCDVILPLV   99 (372)
T ss_dssp             --------------------------------------------------------------HH-------HCSEEEECB
T ss_pred             --------------------------------------------------------------hc-------cCCEEEEcC
Confidence                                                                          32       467777777


Q ss_pred             cccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         197 GRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       197 G~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      |......    ..++.++.+++|+.++..+++++..    .+  +++|++||.+.
T Consensus       100 ~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~----~~--~~~v~~SS~~v  144 (372)
T 3slg_A          100 AIATPAT----YVKQPLRVFELDFEANLPIVRSAVK----YG--KHLVFPSTSEV  144 (372)
T ss_dssp             CCCCHHH----HHHCHHHHHHHHTTTTHHHHHHHHH----HT--CEEEEECCGGG
T ss_pred             ccccHHH----HhhCHHHHHHHHHHHHHHHHHHHHH----hC--CcEEEeCcHHH
Confidence            7543321    2345567889999999888877643    22  79999999643

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.43  E-value=1.9e-13  Score=122.07  Aligned_cols=120  Identities=13%  Similarity=0.130  Sum_probs=86.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCc--HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKC--GAKLVLSARSSSN--LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      |+++||||+++||..++++|+++  |++|++++|+...  .+.+    ....  ..++.++.+|++|++++.++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~----~~~~--~~~~~~~~~Dl~d~~~~~~~------   72 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----EAIL--GDRVELVVGDIADAELVDKL------   72 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----GGGC--SSSEEEEECCTTCHHHHHHH------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH----hhhc--cCCeEEEECCCCCHHHHHHH------
Confidence            67999999999999999999998  8999999986531  1111    1111  24566777777777665544      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++       .+|++||+||.... 
T Consensus        73 --------------------------------------------------------~~-------~~d~vih~A~~~~~-   88 (348)
T 1oc2_A           73 --------------------------------------------------------AA-------KADAIVHYAAESHN-   88 (348)
T ss_dssp             --------------------------------------------------------HT-------TCSEEEECCSCCCH-
T ss_pred             --------------------------------------------------------hh-------cCCEEEECCcccCc-
Confidence                                                                    21       24777777775431 


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                         +.+.+++++.+++|+.++..+++++.+.    +  +++|++||.+.
T Consensus        89 ---~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~--~~~v~~SS~~v  128 (348)
T 1oc2_A           89 ---DNSLNDPSPFIHTNFIGTYTLLEAARKY----D--IRFHHVSTDEV  128 (348)
T ss_dssp             ---HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGG
T ss_pred             ---cchhhCHHHHHHHHHHHHHHHHHHHHHh----C--CeEEEecccce
Confidence               2234567889999999999999988774    2  49999999753

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.42  E-value=2.7e-13  Score=119.08  Aligned_cols=120  Identities=18%  Similarity=0.124  Sum_probs=88.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKC--GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +++++||||+++||..++++|+++  |++|++++|+.+..+ ..          .++.++.+|++|++++.++       
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~----------~~~~~~~~D~~d~~~~~~~-------   63 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV----------NSGPFEVVNALDFNQIEHL-------   63 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH----------HSSCEEECCTTCHHHHHHH-------
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc----------CCCceEEecCCCHHHHHHH-------
Confidence            478999999999999999999998  899999999876521 11          1345677888887766555       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             +++.     ++|++||+||..... 
T Consensus        64 -------------------------------------------------------~~~~-----~~d~vih~a~~~~~~-   82 (312)
T 2yy7_A           64 -------------------------------------------------------VEVH-----KITDIYLMAALLSAT-   82 (312)
T ss_dssp             -------------------------------------------------------HHHT-----TCCEEEECCCCCHHH-
T ss_pred             -------------------------------------------------------Hhhc-----CCCEEEECCccCCCc-
Confidence                                                                   3221     577778877754321 


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                          ..+++++.+++|+.++..+++++.+    .+ .+++|++||.+...
T Consensus        83 ----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~  123 (312)
T 2yy7_A           83 ----AEKNPAFAWDLNMNSLFHVLNLAKA----KK-IKKIFWPSSIAVFG  123 (312)
T ss_dssp             ----HHHCHHHHHHHHHHHHHHHHHHHHT----TS-CSEEECCEEGGGCC
T ss_pred             ----hhhChHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeccHHHhC
Confidence                1256788899999999999887754    22 47999999976543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.42  E-value=4e-13  Score=119.47  Aligned_cols=135  Identities=16%  Similarity=0.128  Sum_probs=93.3

Q ss_pred             EEEEcCCCCchhHHHHHHHHHc---C---CeEEEEecCCC--cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKC---G---AKLVLSARSSS--NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~---G---~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .++||||+++||..++++|+++   |   ++|++++|+..  ..+.+.    ... ...++.++.+|++|++++.++   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~Dl~d~~~~~~~---   73 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA----PVD-ADPRLRFVHGDIRDAGLLARE---   73 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG----GGT-TCTTEEEEECCTTCHHHHHHH---
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhh----hcc-cCCCeEEEEcCCCCHHHHHHH---
Confidence            5899999999999999999997   8   89999998642  111111    111 124567777888877665554   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 +       +++|++||+||..
T Consensus        74 -----------------------------------------------------------~-------~~~d~Vih~A~~~   87 (337)
T 1r6d_A           74 -----------------------------------------------------------L-------RGVDAIVHFAAES   87 (337)
T ss_dssp             -----------------------------------------------------------T-------TTCCEEEECCSCC
T ss_pred             -----------------------------------------------------------h-------cCCCEEEECCCcc
Confidence                                                                       2       3567777777653


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-----------CCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-----------GAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-----------~~~~~~~Y~asK  265 (265)
                      ..    +.+.+++++.+++|+.++..+++++.+.    + .+++|++||.+..-           +.+....|+.||
T Consensus        88 ~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK  155 (337)
T 1r6d_A           88 HV----DRSIAGASVFTETNVQGTQTLLQCAVDA----G-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASK  155 (337)
T ss_dssp             CH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred             Cc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHH
Confidence            21    1234567889999999999999988774    2 47999999975432           223356687766

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.41  E-value=7.4e-13  Score=124.24  Aligned_cols=142  Identities=20%  Similarity=0.180  Sum_probs=90.3

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHc---CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKC---GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      +.....+|+++||||+++||..++++|++.   |++|++++|+.+..+...+.......            .+++....+
T Consensus        67 ~~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~------------~~~~~~~~~  134 (478)
T 4dqv_A           67 PGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDS------------GDPELLRHF  134 (478)
T ss_dssp             CCCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCS------------SCHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHh------------cchhhhhhh
Confidence            335578999999999999999999999999   99999999988765443332222211            000000000


Q ss_pred             HHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccCh------hHHHHHHHHHHhhccccc
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQT------KYHRRCFDAVIQQFGCLD  190 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~------~~v~~~~~~i~~~~g~ld  190 (265)
                                                            ......++..+.+|++++      +++++++       .++|
T Consensus       135 --------------------------------------~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~-------~~~D  169 (478)
T 4dqv_A          135 --------------------------------------KELAADRLEVVAGDKSEPDLGLDQPMWRRLA-------ETVD  169 (478)
T ss_dssp             --------------------------------------HHHHTTTEEEEECCTTSGGGGCCHHHHHHHH-------HHCC
T ss_pred             --------------------------------------hhhccCceEEEEeECCCcccCCCHHHHHHHH-------cCCC
Confidence                                                  000112344444555422      2222222       2589


Q ss_pred             EEEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         191 ILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       191 ilVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      ++||+||....        +.+++.+++|+.++..+++.+..    .+ .+++|++||.+.
T Consensus       170 ~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~----~~-~~~~V~iSS~~v  217 (478)
T 4dqv_A          170 LIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT----TK-LKPFTYVSTADV  217 (478)
T ss_dssp             EEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS----SS-CCCEEEEEEGGG
T ss_pred             EEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh----CC-CCeEEEEeehhh
Confidence            99999987532        34567899999999998887643    22 468999999654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.39  E-value=8.1e-13  Score=116.40  Aligned_cols=114  Identities=19%  Similarity=0.221  Sum_probs=85.1

Q ss_pred             EEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          49 VWITGASSGIGEALALQLSKC--GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      ++||||+++||..++++|+++  |++|++++|+.+..+              ++.++.+|++|++++.++          
T Consensus         2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------------~~~~~~~D~~d~~~~~~~----------   57 (317)
T 3ajr_A            2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------------GIKFITLDVSNRDEIDRA----------   57 (317)
T ss_dssp             EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------------TCCEEECCTTCHHHHHHH----------
T ss_pred             EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------------CceEEEecCCCHHHHHHH----------
Confidence            799999999999999999998  899999998765421              244677888887776655          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++.     .++|++||+||....     
T Consensus        58 ----------------------------------------------------~~~-----~~~d~vih~a~~~~~-----   75 (317)
T 3ajr_A           58 ----------------------------------------------------VEK-----YSIDAIFHLAGILSA-----   75 (317)
T ss_dssp             ----------------------------------------------------HHH-----TTCCEEEECCCCCHH-----
T ss_pred             ----------------------------------------------------Hhh-----cCCcEEEECCcccCC-----
Confidence                                                                322     256777777775422     


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      ...+++++.+++|+.++..+++++.+    .+ .+++|++||.+...
T Consensus        76 ~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~~v~~SS~~~~~  117 (317)
T 3ajr_A           76 KGEKDPALAYKVNMNGTYNILEAAKQ----HR-VEKVVIPSTIGVFG  117 (317)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGCC
T ss_pred             ccccChHHHhhhhhHHHHHHHHHHHH----cC-CCEEEEecCHHHhC
Confidence            12355788899999999999987754    22 47999999987654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.38  E-value=1.8e-12  Score=115.22  Aligned_cols=119  Identities=14%  Similarity=0.103  Sum_probs=85.5

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh-HHHHHHHHHHHHHh
Q psy9256          47 KVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT-KYHRRCFDAVIQQF  124 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~  124 (265)
                      ++++||||+++||..++++|+++ |++|++++|+.+..++..        ...++.++.+|++|. +.+.++        
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~--------   64 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDISIHSEWIEYH--------   64 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT--------TCTTEEEEECCTTTCSHHHHHH--------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh--------cCCCeEEEeccccCcHHHHHhh--------
Confidence            36899999999999999999998 899999999876554321        124577778888874 334333        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++       .+|++||+||...+.. 
T Consensus        65 ------------------------------------------------------~~-------~~d~vih~A~~~~~~~-   82 (345)
T 2bll_A           65 ------------------------------------------------------VK-------KCDVVLPLVAIATPIE-   82 (345)
T ss_dssp             ------------------------------------------------------HH-------HCSEEEECBCCCCHHH-
T ss_pred             ------------------------------------------------------cc-------CCCEEEEcccccCccc-
Confidence                                                                  21       4677888877543221 


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                         ..+++++.+++|+.++..+++++..    .  ++++|++||.+..
T Consensus        83 ---~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~SS~~v~  121 (345)
T 2bll_A           83 ---YTRNPLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVY  121 (345)
T ss_dssp             ---HHHSHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGG
T ss_pred             ---hhcCHHHHHHHHHHHHHHHHHHHHH----h--CCeEEEEecHHHc
Confidence               1245678899999999988887643    2  2799999997654

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.33  E-value=1.7e-12  Score=115.95  Aligned_cols=126  Identities=14%  Similarity=0.125  Sum_probs=81.3

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +.+..+++++++||||+++||..++++|+++|++|++++|+.+...+..+   ... ...++.++.+|+++..       
T Consensus        20 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~~~D~~~~~-------   88 (343)
T 2b69_A           20 QGHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE---HWI-GHENFELINHDVVEPL-------   88 (343)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG---GGT-TCTTEEEEECCTTSCC-------
T ss_pred             ccccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhh---hhc-cCCceEEEeCccCChh-------
Confidence            34456788999999999999999999999999999999987543221111   010 1234556666665531       


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                                                                                         +.++|++||+||.
T Consensus        89 -------------------------------------------------------------------~~~~d~vih~A~~  101 (343)
T 2b69_A           89 -------------------------------------------------------------------YIEVDQIYHLASP  101 (343)
T ss_dssp             -------------------------------------------------------------------CCCCSEEEECCSC
T ss_pred             -------------------------------------------------------------------hcCCCEEEECccc
Confidence                                                                               2356777777775


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      ......    .+++++.+++|+.++..+++++..    .+  .++|++||.+..
T Consensus       102 ~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~----~~--~~~v~~SS~~v~  145 (343)
T 2b69_A          102 ASPPNY----MYNPIKTLKTNTIGTLNMLGLAKR----VG--ARLLLASTSEVY  145 (343)
T ss_dssp             CSHHHH----TTCHHHHHHHHHHHHHHHHHHHHH----HT--CEEEEEEEGGGG
T ss_pred             cCchhh----hhCHHHHHHHHHHHHHHHHHHHHH----hC--CcEEEECcHHHh
Confidence            432211    234567899999999999987754    22  489999997543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.32  E-value=4.3e-12  Score=111.77  Aligned_cols=112  Identities=15%  Similarity=0.118  Sum_probs=82.6

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +++++||||++.||..++++|+++|++|++++|+++..+ .           .++.++.+|++ ++++.++         
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-----------~~~~~~~~Dl~-~~~~~~~---------   59 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-----------NDYEYRVSDYT-LEDLINQ---------   59 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHH---------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-----------CceEEEEcccc-HHHHHHh---------
Confidence            478999999999999999999999999999999843322 1           15677888888 7765555         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           +       .++|++||+||.....   
T Consensus        60 -----------------------------------------------------~-------~~~d~Vih~a~~~~~~---   76 (311)
T 3m2p_A           60 -----------------------------------------------------L-------NDVDAVVHLAATRGSQ---   76 (311)
T ss_dssp             -----------------------------------------------------T-------TTCSEEEECCCCCCSS---
T ss_pred             -----------------------------------------------------h-------cCCCEEEEccccCCCC---
Confidence                                                                 2       2577777777754332   


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                           ++++.+++|+.++..+++++..    .+ .+++|++||.+..
T Consensus        77 -----~~~~~~~~n~~~~~~ll~a~~~----~~-~~r~v~~SS~~vy  113 (311)
T 3m2p_A           77 -----GKISEFHDNEILTQNLYDACYE----NN-ISNIVYASTISAY  113 (311)
T ss_dssp             -----SCGGGTHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGC
T ss_pred             -----ChHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEccHHHh
Confidence                 4466889999999888887643    23 5789999995543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.32  E-value=1.6e-12  Score=113.02  Aligned_cols=104  Identities=18%  Similarity=0.187  Sum_probs=79.7

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      +++||||+++||.+++++|+++|++|++++|.                        ++|++|++++.++           
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~D~~d~~~~~~~-----------   51 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------------LLDITNISQVQQV-----------   51 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------------TSCTTCHHHHHHH-----------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------------ccCCCCHHHHHHH-----------
Confidence            79999999999999999999999999999882                        2577777766655           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         ++..     ++|++||+||.....    .
T Consensus        52 ---------------------------------------------------~~~~-----~~d~vi~~a~~~~~~----~   71 (287)
T 3sc6_A           52 ---------------------------------------------------VQEI-----RPHIIIHCAAYTKVD----Q   71 (287)
T ss_dssp             ---------------------------------------------------HHHH-----CCSEEEECCCCCCHH----H
T ss_pred             ---------------------------------------------------HHhc-----CCCEEEECCcccChH----H
Confidence                                                               3332     567777777754321    2


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      ..+++++.+++|+.++..+++.+.+.      +.++|++||.+..
T Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~SS~~vy  110 (287)
T 3sc6_A           72 AEKERDLAYVINAIGARNVAVASQLV------GAKLVYISTDYVF  110 (287)
T ss_dssp             HTTCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGS
T ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchhhhc
Confidence            23567889999999999999987542      2489999997654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.32  E-value=1e-12  Score=115.45  Aligned_cols=85  Identities=11%  Similarity=0.107  Sum_probs=67.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||+++||||++|+|+++++.|++.|++|++++|+.++.+++.+++....    ++.++.+|+++++++.+++    
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~----~~~~~~~D~~~~~~~~~~~----  186 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF----KVNVTAAETADDASRAEAV----  186 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH----TCCCEEEECCSHHHHHHHT----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEecCCCHHHHHHHH----
Confidence            45789999999999999999999999999999999999887777766654321    3456788999988766552    


Q ss_pred             HHhCCccEEEeCCCCC
Q psy9256         122 QQFGCLDILINNAGRS  137 (265)
Q Consensus       122 ~~~g~ldilinnAg~~  137 (265)
                         ..+|++|||||+.
T Consensus       187 ---~~~DvlVn~ag~g  199 (287)
T 1lu9_A          187 ---KGAHFVFTAGAIG  199 (287)
T ss_dssp             ---TTCSEEEECCCTT
T ss_pred             ---HhCCEEEECCCcc
Confidence               3468888888753

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.30  E-value=4.9e-12  Score=111.59  Aligned_cols=111  Identities=14%  Similarity=0.160  Sum_probs=81.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |++++++||||++.||..++++|+++|++|+++.|+.                       .+|++|++++.++       
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------------~~D~~d~~~~~~~-------   50 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDF-------   50 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHH-------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------------cCCccCHHHHHHH-------
Confidence            3467899999999999999999999999998887652                       2577777666555       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             +++.     ++|++||+||..... 
T Consensus        51 -------------------------------------------------------~~~~-----~~d~vih~a~~~~~~-   69 (321)
T 1e6u_A           51 -------------------------------------------------------FASE-----RIDQVYLAAAKVGGI-   69 (321)
T ss_dssp             -------------------------------------------------------HHHH-----CCSEEEECCCCCCCH-
T ss_pred             -------------------------------------------------------HHhc-----CCCEEEEcCeecCCc-
Confidence                                                                   3322     567777777754211 


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                        ....++.++.+++|+.++..+++++..    .+ .+++|++||.+..
T Consensus        70 --~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~vy  111 (321)
T 1e6u_A           70 --VANNTYPADFIYQNMMIESNIIHAAHQ----ND-VNKLLFLGSSCIY  111 (321)
T ss_dssp             --HHHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGS
T ss_pred             --chhhhCHHHHHHHHHHHHHHHHHHHHH----hC-CCeEEEEccHHHc
Confidence              122345678899999999998887754    22 4799999997654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.29  E-value=1.7e-12  Score=113.07  Aligned_cols=113  Identities=20%  Similarity=0.152  Sum_probs=80.9

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |++++++||| ++.||..++++|+++|++|++++|+.+..             ..++.++.+|++|++++.++       
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------~~~~~~~~~Dl~d~~~~~~~-------   59 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-------------PAGVQTLIADVTRPDTLASI-------   59 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-------------CTTCCEEECCTTCGGGCTTG-------
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccCCceEEccCCChHHHHHh-------
Confidence            3457899999 59999999999999999999999987652             24567788888887765544       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++      +++|++||+||..    
T Consensus        60 -------------------------------------------------------~~------~~~d~vih~a~~~----   74 (286)
T 3gpi_A           60 -------------------------------------------------------VH------LRPEILVYCVAAS----   74 (286)
T ss_dssp             -------------------------------------------------------GG------GCCSEEEECHHHH----
T ss_pred             -------------------------------------------------------hc------CCCCEEEEeCCCC----
Confidence                                                                   21      3578888887742    


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                           ..++++.+++|+.++..+++++.    +.+ .+++|++||.+..
T Consensus        75 -----~~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~v~~SS~~vy  113 (286)
T 3gpi_A           75 -----EYSDEHYRLSYVEGLRNTLSALE----GAP-LQHVFFVSSTGVY  113 (286)
T ss_dssp             -----HHC-----CCSHHHHHHHHHHTT----TSC-CCEEEEEEEGGGC
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHh----hCC-CCEEEEEcccEEE
Confidence                 24457788999999888887654    232 5799999997543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.28  E-value=9.1e-12  Score=121.21  Aligned_cols=122  Identities=14%  Similarity=0.076  Sum_probs=88.2

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH-HHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY-HRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~  121 (265)
                      +++++++||||+++||.+++++|+++ |++|++++|+.+..++..        ...++.++.+|++|.++ +..+     
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~--------~~~~v~~v~~Dl~d~~~~~~~~-----  379 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDISIHSEWIEYH-----  379 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT--------TCTTEEEEECCTTTCHHHHHHH-----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc--------cCCceEEEECCCCCcHHHHHHh-----
Confidence            56889999999999999999999998 899999999876543321        12457777888887643 3323     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++       ++|++||+||....
T Consensus       380 ---------------------------------------------------------~~-------~~D~Vih~Aa~~~~  395 (660)
T 1z7e_A          380 ---------------------------------------------------------VK-------KCDVVLPLVAIATP  395 (660)
T ss_dssp             ---------------------------------------------------------HH-------HCSEEEECCCCCCT
T ss_pred             ---------------------------------------------------------hc-------CCCEEEECceecCc
Confidence                                                                     21       46778887775432


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      ..    ..+++++.+++|+.++..+++++..    .  ++++|++||.+..
T Consensus       396 ~~----~~~~~~~~~~~Nv~gt~~ll~aa~~----~--~~r~V~~SS~~vy  436 (660)
T 1z7e_A          396 IE----YTRNPLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVY  436 (660)
T ss_dssp             HH----HHHSHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGG
T ss_pred             cc----cccCHHHHHHhhhHHHHHHHHHHHH----h--CCEEEEEecHHHc
Confidence            11    1345678999999999988887754    2  2799999997654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.27  E-value=1.4e-11  Score=106.88  Aligned_cols=61  Identities=16%  Similarity=0.224  Sum_probs=49.0

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKC--GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      |+++||||+++||..++++|+++  |++|++++|+++..+.+..         .++.++.+|++|++++.++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~---------~~~~~~~~D~~d~~~l~~~   63 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD---------QGVEVRHGDYNQPESLQKA   63 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH---------TTCEEEECCTTCHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh---------cCCeEEEeccCCHHHHHHH
Confidence            46899999999999999999998  9999999998776544321         2466788888887766555

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.26  E-value=5.5e-12  Score=110.14  Aligned_cols=107  Identities=18%  Similarity=0.129  Sum_probs=79.4

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      .++||||++.||..++++|+ +|++|++++|+.+                    .+.+|++|++++.++           
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------------~~~~D~~d~~~~~~~-----------   49 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------------EFCGDFSNPKGVAET-----------   49 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------------SSCCCTTCHHHHHHH-----------
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------------cccccCCCHHHHHHH-----------
Confidence            58999999999999999999 8999999998751                    145677777665555           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         ++..     ++|++||+||.....    .
T Consensus        50 ---------------------------------------------------~~~~-----~~d~vih~a~~~~~~----~   69 (299)
T 1n2s_A           50 ---------------------------------------------------VRKL-----RPDVIVNAAAHTAVD----K   69 (299)
T ss_dssp             ---------------------------------------------------HHHH-----CCSEEEECCCCCCHH----H
T ss_pred             ---------------------------------------------------HHhc-----CCCEEEECcccCCHh----h
Confidence                                                               3322     477788877754321    1


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      +.+++++.+++|+.++..+++++..    .  +.++|++||.+..
T Consensus        70 ~~~~~~~~~~~n~~~~~~l~~a~~~----~--~~~~v~~SS~~vy  108 (299)
T 1n2s_A           70 AESEPELAQLLNATSVEAIAKAANE----T--GAWVVHYSTDYVF  108 (299)
T ss_dssp             HTTCHHHHHHHHTHHHHHHHHHHTT----T--TCEEEEEEEGGGS
T ss_pred             hhcCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEEecccEE
Confidence            2345678899999999999887743    2  2489999997654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.24  E-value=1e-11  Score=108.78  Aligned_cols=119  Identities=14%  Similarity=0.171  Sum_probs=81.9

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          48 VVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      +++||||+++||..++++|+++| ++|++++|+.+... . ..+.  .     +. +.+|+++.++++.+          
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~-~~~~--~-----~~-~~~d~~~~~~~~~~----------   60 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F-VNLV--D-----LN-IADYMDKEDFLIQI----------   60 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-G-HHHH--T-----SC-CSEEEEHHHHHHHH----------
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-h-hhcC--c-----ce-eccccccHHHHHHH----------
Confidence            37999999999999999999999 89999998765421 1 1111  0     11 45666665554443          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++..  .++++|++||+||....     
T Consensus        61 ----------------------------------------------------~~~~--~~~~~d~vi~~a~~~~~-----   81 (310)
T 1eq2_A           61 ----------------------------------------------------MAGE--EFGDVEAIFHEGACSST-----   81 (310)
T ss_dssp             ----------------------------------------------------HTTC--CCSSCCEEEECCSCCCT-----
T ss_pred             ----------------------------------------------------Hhcc--ccCCCcEEEECcccccC-----
Confidence                                                                2210  02367888888885432     


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                       +.+++++.+++|+.++..+++++.+    .+ . ++|++||.+..
T Consensus        82 -~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~-~~v~~SS~~v~  120 (310)
T 1eq2_A           82 -TEWDGKYMMDNNYQYSKELLHYCLE----RE-I-PFLYASSAATY  120 (310)
T ss_dssp             -TCCCHHHHHHHTHHHHHHHHHHHHH----HT-C-CEEEEEEGGGG
T ss_pred             -cccCHHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEEeeHHHh
Confidence             2345688999999999999987754    23 4 99999997653

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.18  E-value=5.4e-11  Score=103.00  Aligned_cols=60  Identities=20%  Similarity=0.251  Sum_probs=48.2

Q ss_pred             EEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKC--GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      +++||||+++||.+++++|+++  |++|++++|+++..+.+..         .++.++.+|++|++++.++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~D~~d~~~~~~~   62 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA---------QGITVRQADYGDEAALTSA   62 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH---------TTCEEEECCTTCHHHHHHH
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc---------CCCeEEEcCCCCHHHHHHH
Confidence            3799999999999999999998  9999999998776544322         2466788898888776555

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.17  E-value=3.5e-11  Score=113.41  Aligned_cols=124  Identities=17%  Similarity=0.123  Sum_probs=83.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHH---HHHHHHHhC------CCCCcEEEEeecCCChHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER---VKNLCVQAG------AHPQSIYTLTLDVTQTKYHRR  115 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~  115 (265)
                      ..++++||||+|.||..++++|.+.|++|+++.|+....+.   +.+.+....      ....++.++.+|++++++   
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~---  225 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD---  225 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSS---
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccccc---
Confidence            35799999999999999999999999999999998874332   323222211      012345555555555432   


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEec
Q psy9256         116 CFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       116 ~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn  195 (265)
                                                                                 +.        ...++|++||+
T Consensus       226 -----------------------------------------------------------l~--------~~~~~D~Vih~  238 (508)
T 4f6l_B          226 -----------------------------------------------------------VV--------LPENMDTIIHA  238 (508)
T ss_dssp             -----------------------------------------------------------CC--------CSSCCSEEEEC
T ss_pred             -----------------------------------------------------------CC--------CccCCCEEEEC
Confidence                                                                       22        23567888888


Q ss_pred             ccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         196 AGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       196 AG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      ||...       ...++++.+++|+.++..+++.+..     + .+++|++||.+.
T Consensus       239 Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~-~~~~v~iSS~~v  281 (508)
T 4f6l_B          239 GARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISV  281 (508)
T ss_dssp             CCC---------------CCHHHHHHHHHHHHHHHHT-----T-TCEEEEEEESCT
T ss_pred             Cceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----C-CCcEEEeCChhh
Confidence            87542       1235678889999999999997755     2 479999999876

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.16  E-value=1.4e-11  Score=107.73  Aligned_cols=115  Identities=17%  Similarity=0.133  Sum_probs=76.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|++++++||||++.||..++++|+++|+      +....              ...+..+.+|++|++++.++      
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~--------------~~~~~~~~~D~~d~~~~~~~------   56 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED--------------WVFVSSKDADLTDTAQTRAL------   56 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE--------------EEECCTTTCCTTSHHHHHHH------
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc--------------ccccCceecccCCHHHHHHH------
Confidence            36778999999999999999999999997      11000              01112234566555554444      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++.     .++|++||+||.....
T Consensus        57 --------------------------------------------------------~~~-----~~~d~Vih~A~~~~~~   75 (319)
T 4b8w_A           57 --------------------------------------------------------FEK-----VQPTHVIHLAAMVGGL   75 (319)
T ss_dssp             --------------------------------------------------------HHH-----SCCSEEEECCCCCCCH
T ss_pred             --------------------------------------------------------Hhh-----cCCCEEEECceecccc
Confidence                                                                    433     1578888888863211


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                         ..+.++.++.+++|+.++..+++++..    .+ .+++|++||.+..
T Consensus        76 ---~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~-~~~~v~~SS~~vy  117 (319)
T 4b8w_A           76 ---FRNIKYNLDFWRKNVHMNDNVLHSAFE----VG-ARKVVSCLSTCIF  117 (319)
T ss_dssp             ---HHHTTCHHHHHHHHHHHHHHHHHHHHH----TT-CSEEEEECCGGGS
T ss_pred             ---cccccCHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEEcchhhc
Confidence               123345677899999999998887643    22 4699999997543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.16  E-value=2.7e-10  Score=102.69  Aligned_cols=66  Identities=12%  Similarity=0.094  Sum_probs=50.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeec-CCChHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD-VTQTKYHRRC  116 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~  116 (265)
                      .+++++||||+++||.+++++|+++|++|++++|+++....  +.+..    ..++.++.+| ++|++++.++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~----~~~v~~v~~D~l~d~~~l~~~   70 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA----IPNVTLFQGPLLNNVPLMDTL   70 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT----STTEEEEESCCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhh----cCCcEEEECCccCCHHHHHHH
Confidence            46789999999999999999999999999999998876521  11111    1356778888 8888776655

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.12  E-value=2.1e-10  Score=100.33  Aligned_cols=76  Identities=14%  Similarity=0.076  Sum_probs=57.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|+++||||+++||.+++++|+++| ++|++++|+++....  +.+..     ..+.++.+|++|++++.+++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~-----~~~~~~~~D~~d~~~l~~~~-------   70 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL-----QGAEVVQGDQDDQVIMELAL-------   70 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH-----TTCEEEECCTTCHHHHHHHH-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH-----CCCEEEEecCCCHHHHHHHH-------
Confidence            5789999999999999999999998 999999998776432  11211     24677889999988766552       


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                      .+.|.+|||||
T Consensus        71 ~~~d~vi~~a~   81 (299)
T 2wm3_A           71 NGAYATFIVTN   81 (299)
T ss_dssp             TTCSEEEECCC
T ss_pred             hcCCEEEEeCC
Confidence            23566666665

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.09  E-value=4.8e-10  Score=97.43  Aligned_cols=60  Identities=13%  Similarity=0.117  Sum_probs=48.5

Q ss_pred             EEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      +++||||+++||..++++|.+. |++|++++|+++..+.+.         ..++.++.+|++|++++.++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~---------~~~v~~~~~D~~d~~~l~~~   62 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW---------RGKVSVRQLDYFNQESMVEA   62 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG---------BTTBEEEECCTTCHHHHHHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh---------hCCCEEEEcCCCCHHHHHHH
Confidence            4899999999999999999987 999999999876654321         24677888888888776655

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.09  E-value=1.1e-10  Score=98.96  Aligned_cols=79  Identities=24%  Similarity=0.257  Sum_probs=62.1

Q ss_pred             ccCCcEEEEcCC----------------CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeec
Q psy9256          43 YFNNKVVWITGA----------------SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD  106 (265)
Q Consensus        43 ~l~gk~vlItGa----------------s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D  106 (265)
                      +|.||+++||||                |+|||.++|++++++|++|++++++.. ++        .   +..+  -.+|
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~---~~g~--~~~d   70 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------T---PPFV--KRVD   70 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------C---CTTE--EEEE
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------c---CCCC--eEEc
Confidence            578999999999                588999999999999999999987652 11        0   1112  2457


Q ss_pred             CCChHHHHHHHHHHHHHhCCccEEEeCCCCCc
Q psy9256         107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  138 (265)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~  138 (265)
                      +++.   ..+++.+.+.+|++|++|||||+..
T Consensus        71 v~~~---~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           71 VMTA---LEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             CCSH---HHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             cCcH---HHHHHHHHHhcCCCCEEEECCcccC
Confidence            7664   5567778889999999999999864

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.06  E-value=2.9e-10  Score=101.73  Aligned_cols=117  Identities=15%  Similarity=0.089  Sum_probs=84.8

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcC-----CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCG-----AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +++++||||++.||..++++|+++|     ++|++++|+.+...        .  ...++.++.+|++|++++.++    
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------~--~~~~~~~~~~Dl~d~~~~~~~----   66 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------H--EDNPINYVQCDISDPDDSQAK----   66 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------C--CSSCCEEEECCTTSHHHHHHH----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------c--ccCceEEEEeecCCHHHHHHH----
Confidence            4789999999999999999999999     99999999876532        0  124566777888877665444    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                +    +..+++|++||+||...
T Consensus        67 ----------------------------------------------------------~----~~~~~~d~vih~a~~~~   84 (364)
T 2v6g_A           67 ----------------------------------------------------------L----SPLTDVTHVFYVTWANR   84 (364)
T ss_dssp             ----------------------------------------------------------H----TTCTTCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------H----hcCCCCCEEEECCCCCc
Confidence                                                                      2    22234788888888541


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEE-------EEcccc
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLV-------VTSSIA  250 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV-------~isS~a  250 (265)
                               ++.++.+++|+.++..+++++.+...  + ..++|       ++||.+
T Consensus        85 ---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~-~~~~v~~~g~~i~~Ss~~  129 (364)
T 2v6g_A           85 ---------STEQENCEANSKMFRNVLDAVIPNCP--N-LKHISLQTGRKHYMGPFE  129 (364)
T ss_dssp             ---------SSHHHHHHHHHHHHHHHHHHHTTTCT--T-CCEEEEECCTHHHHCCGG
T ss_pred             ---------chHHHHHHHhHHHHHHHHHHHHHhcc--c-cceEEeccCceEEEechh
Confidence                     24577889999999999998866421  1 34665       677764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.04  E-value=1.2e-10  Score=102.26  Aligned_cols=39  Identities=23%  Similarity=0.226  Sum_probs=34.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      ++++++++||||++.||..++++|+++|++|++++|+.+
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            356789999999999999999999999999999999765

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.03  E-value=5.8e-10  Score=97.53  Aligned_cols=79  Identities=20%  Similarity=0.266  Sum_probs=61.6

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-------CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-------SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      +++++||||+++||.+++++|++.|++|++.+|+.       ++.+.+. .+..     ..+.++.+|++|++++.+++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~-~l~~-----~~v~~v~~D~~d~~~l~~~~-   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELID-NYQS-----LGVILLEGDINDHETLVKAI-   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHH-HHHH-----TTCEEEECCTTCHHHHHHHH-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHH-HHHh-----CCCEEEEeCCCCHHHHHHHH-
Confidence            46799999999999999999999999999999986       2222221 1111     34778999999998877664 


Q ss_pred             HHHHHhCCccEEEeCCCCC
Q psy9256         119 AVIQQFGCLDILINNAGRS  137 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~  137 (265)
                            .+.|++|||||..
T Consensus        75 ------~~~d~vi~~a~~~   87 (307)
T 2gas_A           75 ------KQVDIVICAAGRL   87 (307)
T ss_dssp             ------TTCSEEEECSSSS
T ss_pred             ------hCCCEEEECCccc
Confidence                  3689999999964

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.97  E-value=2.7e-10  Score=91.28  Aligned_cols=83  Identities=19%  Similarity=0.196  Sum_probs=66.8

Q ss_pred             CchhHHHHHHHHHcCCeEEEEecCCCcHHH---HHHHHHHhCCCCCcEEEEeecCCCh--HHHHHHHHHHHHHhCCccEE
Q psy9256          56 SGIGEALALQLSKCGAKLVLSARSSSNLER---VKNLCVQAGAHPQSIYTLTLDVTQT--KYHRRCFDAVIQQFGCLDIL  130 (265)
Q Consensus        56 ~GIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~ldil  130 (265)
                      +-++.++++.|+++|++|++..|+.+..+.   ..+.+.+.   +.+...+++|++++  ++++++++.+.+.+|+ |+|
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~---G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVL  101 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA---GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVL  101 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT---TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc---CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEE
Confidence            357899999999999999999887654432   34444444   36788999999999  9999999999999999 999


Q ss_pred             EeCCCCCccccc
Q psy9256         131 INNAGRSQRAAW  142 (265)
Q Consensus       131 innAg~~~~~~~  142 (265)
                      |||||+...+.+
T Consensus       102 VnnAgg~r~~~l  113 (157)
T 3gxh_A          102 VHCLANYRASAF  113 (157)
T ss_dssp             EECSBSHHHHHH
T ss_pred             EECCCCCCHHHH
Confidence            999998654433

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.93  E-value=3e-09  Score=92.16  Aligned_cols=53  Identities=13%  Similarity=0.181  Sum_probs=44.5

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ  109 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (265)
                      +.++|||| +.||..++++|.++|++|++++|+++..+.+..         .++.++.+|++|
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~D~~d   58 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA---------SGAEPLLWPGEE   58 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH---------TTEEEEESSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh---------CCCeEEEecccc
Confidence            67999998 999999999999999999999998876654432         357778888877

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=98.93  E-value=2.3e-09  Score=93.71  Aligned_cols=82  Identities=16%  Similarity=0.172  Sum_probs=62.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcH--HHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL--ERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .++++||||+++||.+++++|++.|++|++++|+.+..  .+..+.+....  ...+.++.+|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc-----
Confidence            46799999999999999999999999999999986532  11112222221  2457789999999988776643     


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                        +.|++||+||.
T Consensus        77 --~~d~vi~~a~~   87 (308)
T 1qyc_A           77 --NVDVVISTVGS   87 (308)
T ss_dssp             --TCSEEEECCCG
T ss_pred             --CCCEEEECCcc
Confidence              58999999985

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=98.93  E-value=1.4e-09  Score=95.77  Aligned_cols=77  Identities=13%  Similarity=0.117  Sum_probs=61.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      ++++||||+++||.+++++|++.|++|++++|+.+ ..+.+ +.+..     ..+.++.+|++|++++.+++       .
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-~~l~~-----~~v~~v~~Dl~d~~~l~~a~-------~   78 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLL-DEFQS-----LGAIIVKGELDEHEKLVELM-------K   78 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHH-HHHHH-----TTCEEEECCTTCHHHHHHHH-------T
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHH-HHhhc-----CCCEEEEecCCCHHHHHHHH-------c
Confidence            57999999999999999999999999999999875 33222 22221     34778999999998877664       3


Q ss_pred             CccEEEeCCCC
Q psy9256         126 CLDILINNAGR  136 (265)
Q Consensus       126 ~ldilinnAg~  136 (265)
                      +.|++||+||.
T Consensus        79 ~~d~vi~~a~~   89 (318)
T 2r6j_A           79 KVDVVISALAF   89 (318)
T ss_dssp             TCSEEEECCCG
T ss_pred             CCCEEEECCch
Confidence            58999999985

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=98.92  E-value=1.6e-09  Score=95.56  Aligned_cols=82  Identities=13%  Similarity=0.113  Sum_probs=61.1

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-Cc--HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SN--LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .++++||||+++||.+++++|++.|++|++++|+. +.  .++. +.+....  ..++.++.+|++|++++.+++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~l~~~~--~~~v~~v~~D~~d~~~l~~a~-----   75 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSV-QLREEFR--SMGVTIIEGEMEEHEKMVSVL-----   75 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHH-HHHHHHH--HTTCEEEECCTTCHHHHHHHH-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHH-HHHHHhh--cCCcEEEEecCCCHHHHHHHH-----
Confidence            35799999999999999999999999999999986 21  1111 1111111  135778999999998877664     


Q ss_pred             HhCCccEEEeCCCCC
Q psy9256         123 QFGCLDILINNAGRS  137 (265)
Q Consensus       123 ~~g~ldilinnAg~~  137 (265)
                        .+.|++||+||..
T Consensus        76 --~~~d~vi~~a~~~   88 (321)
T 3c1o_A           76 --KQVDIVISALPFP   88 (321)
T ss_dssp             --TTCSEEEECCCGG
T ss_pred             --cCCCEEEECCCcc
Confidence              3589999999953

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.91  E-value=5.6e-09  Score=91.45  Aligned_cols=81  Identities=12%  Similarity=0.132  Sum_probs=57.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcH--HHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL--ERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .++++||||+++||.+++++|++.|++|++++|+.+..  ++. +.+....  ..++.++.+|++|++++.+++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~--~~~~~~~~~D~~d~~~l~~~~------   74 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKV-QMLLYFK--QLGAKLIEASLDDHQRLVDAL------   74 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHH-HHHHHHH--TTTCEEECCCSSCHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHH-HHHHHHH--hCCeEEEeCCCCCHHHHHHHH------
Confidence            46799999999999999999999999999999986431  121 1122111  135778889999987766552      


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                       .+.|++||+||.
T Consensus        75 -~~~d~vi~~a~~   86 (313)
T 1qyd_A           75 -KQVDVVISALAG   86 (313)
T ss_dssp             -TTCSEEEECCCC
T ss_pred             -hCCCEEEECCcc
Confidence             246666666664

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.90  E-value=5.6e-09  Score=98.67  Aligned_cols=111  Identities=19%  Similarity=0.198  Sum_probs=78.8

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +++++||||+|.||..++++|++.|++|++++|+.+..+                 .+.+|+.+..              
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~-----------------~v~~d~~~~~--------------  195 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG-----------------KRFWDPLNPA--------------  195 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT-----------------CEECCTTSCC--------------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc-----------------ceeecccchh--------------
Confidence            678999999999999999999999999999999876421                 1445554321              


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                               .+.+.++|++||+||.....   
T Consensus       196 ---------------------------------------------------------~~~l~~~D~Vih~A~~~~~~---  215 (516)
T 3oh8_A          196 ---------------------------------------------------------SDLLDGADVLVHLAGEPIFG---  215 (516)
T ss_dssp             ---------------------------------------------------------TTTTTTCSEEEECCCC-------
T ss_pred             ---------------------------------------------------------HHhcCCCCEEEECCCCcccc---
Confidence                                                                     11124677888887764332   


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      ..+.+..++.+++|+.++..+++++..    ..+.+++|++||.+.
T Consensus       216 ~~~~~~~~~~~~~Nv~gt~~ll~a~a~----~~~~~r~V~~SS~~v  257 (516)
T 3oh8_A          216 RFNDSHKEAIRESRVLPTKFLAELVAE----STQCTTMISASAVGF  257 (516)
T ss_dssp             -CCGGGHHHHHHHTHHHHHHHHHHHHH----CSSCCEEEEEEEGGG
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHh----cCCCCEEEEeCcceE
Confidence            344566788999999999999986432    222579999999654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.89  E-value=1.4e-09  Score=92.41  Aligned_cols=83  Identities=12%  Similarity=0.176  Sum_probs=63.1

Q ss_pred             CCcEEEEcCC----------------CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCC
Q psy9256          45 NNKVVWITGA----------------SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT  108 (265)
Q Consensus        45 ~gk~vlItGa----------------s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~  108 (265)
                      .||+++||||                |+++|.++|+++++.|++|++++|..+....          .+..     +|+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~----------~~~~-----~~~~   66 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE----------PHPN-----LSIR   66 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC----------CCTT-----EEEE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc----------CCCC-----eEEE
Confidence            5899999999                6679999999999999999999986532110          0112     3444


Q ss_pred             ChHHHHHHHHHHHHHhCCccEEEeCCCCCccccc
Q psy9256         109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  142 (265)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~  142 (265)
                      +.++.....+.+.+.+++.|++|||||++.....
T Consensus        67 ~v~s~~em~~~v~~~~~~~Dili~aAAvsD~~p~  100 (232)
T 2gk4_A           67 EITNTKDLLIEMQERVQDYQVLIHSMAVSDYTPV  100 (232)
T ss_dssp             ECCSHHHHHHHHHHHGGGCSEEEECSBCCSEEEE
T ss_pred             EHhHHHHHHHHHHHhcCCCCEEEEcCccccccch
Confidence            5556777888889999999999999998755433

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.85  E-value=3.1e-09  Score=95.74  Aligned_cols=32  Identities=25%  Similarity=0.319  Sum_probs=28.4

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCC-eEEEEecC
Q psy9256          48 VVWITGASSGIGEALALQLSKCGA-KLVLSARS   79 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~   79 (265)
                      .++||||++.||..++++|+++|+ +|+..+|+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~   34 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ   34 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence            589999999999999999999998 88776653

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.85  E-value=6.6e-09  Score=92.73  Aligned_cols=87  Identities=14%  Similarity=0.125  Sum_probs=65.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |..++++||||+|.||..++++|++.|++|++++|+.....+..+.+....  ..++.++.+|++|.+++.++++.    
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~----   81 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKE----   81 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHH----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhh----
Confidence            456789999999999999999999999999999998733222222222221  14688899999999888877544    


Q ss_pred             hCCccEEEeCCCCC
Q psy9256         124 FGCLDILINNAGRS  137 (265)
Q Consensus       124 ~g~ldilinnAg~~  137 (265)
                       .++|++||+||..
T Consensus        82 -~~~d~Vi~~a~~~   94 (346)
T 3i6i_A           82 -HEIDIVVSTVGGE   94 (346)
T ss_dssp             -TTCCEEEECCCGG
T ss_pred             -CCCCEEEECCchh
Confidence             2799999999973

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.69  E-value=1.9e-10  Score=107.39  Aligned_cols=44  Identities=18%  Similarity=0.328  Sum_probs=38.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVK   87 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   87 (265)
                      .+.||+++|||++ |||+++|+.|...|++|+++++++.+.+++.
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            5899999999998 9999999999999999999998876554443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.62  E-value=8e-08  Score=71.74  Aligned_cols=75  Identities=17%  Similarity=0.230  Sum_probs=60.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +++.++|+|+ +++|.++++.|.+.| ++|++++|++++.+.+.         ...+..+.+|+++.+++.+.       
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~-------   66 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN---------RMGVATKQVDAKDEAGLAKA-------   66 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH---------TTTCEEEECCTTCHHHHHHH-------
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH---------hCCCcEEEecCCCHHHHHHH-------
Confidence            4578999999 999999999999999 88999999876665443         13456788999998766655       


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                      ..+.|++||++|.
T Consensus        67 ~~~~d~vi~~~~~   79 (118)
T 3ic5_A           67 LGGFDAVISAAPF   79 (118)
T ss_dssp             TTTCSEEEECSCG
T ss_pred             HcCCCEEEECCCc
Confidence            3579999999974

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.62  E-value=1e-08  Score=97.26  Aligned_cols=46  Identities=30%  Similarity=0.417  Sum_probs=34.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNL   89 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~   89 (265)
                      ++.||+++||||+ |+|+++++.|++.|++|++++|+.++++++.+.
T Consensus       361 ~l~~k~vlV~GaG-Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~  406 (523)
T 2o7s_A          361 PLASKTVVVIGAG-GAGKALAYGAKEKGAKVVIANRTYERALELAEA  406 (523)
T ss_dssp             -----CEEEECCS-HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHH
T ss_pred             ccCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence            5789999999995 999999999999999999999987766655443

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.57  E-value=2.3e-08  Score=87.56  Aligned_cols=83  Identities=18%  Similarity=0.261  Sum_probs=62.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .++.+|+++|||++ |+|+++++.|++.| +|++++|+.++++++.+.+......  . ..+.+|+++.          .
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~--~-~~~~~d~~~~----------~  188 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNK--K-FGEEVKFSGL----------D  188 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTC--C-HHHHEEEECT----------T
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccc--c-cceeEEEeeH----------H
Confidence            36789999999997 99999999999999 9999999988777776665432100  0 0123455542          3


Q ss_pred             HHhCCccEEEeCCCCCcc
Q psy9256         122 QQFGCLDILINNAGRSQR  139 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~  139 (265)
                      +.+++.|++|||+|+...
T Consensus       189 ~~~~~~DilVn~ag~~~~  206 (287)
T 1nvt_A          189 VDLDGVDIIINATPIGMY  206 (287)
T ss_dssp             CCCTTCCEEEECSCTTCT
T ss_pred             HhhCCCCEEEECCCCCCC
Confidence            456899999999998654

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.56  E-value=8e-08  Score=78.99  Aligned_cols=79  Identities=19%  Similarity=0.231  Sum_probs=57.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|++++||||++|||.++++.+...|++|+.++|++++.+.+.    +.+   ..   ..+|.++.+..+.+.+...  .
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g---~~---~~~d~~~~~~~~~~~~~~~--~  105 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLG---VE---YVGDSRSVDFADEILELTD--G  105 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTC---CS---EEEETTCSTHHHHHHHHTT--T
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcC---CC---EEeeCCcHHHHHHHHHHhC--C
Confidence            6899999999999999999999999999999998766554332    222   12   2357777655444422211  1


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                      +++|++|||+|
T Consensus       106 ~~~D~vi~~~g  116 (198)
T 1pqw_A          106 YGVDVVLNSLA  116 (198)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCeEEEECCc
Confidence            36999999998

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.53  E-value=3.4e-07  Score=84.07  Aligned_cols=83  Identities=20%  Similarity=0.216  Sum_probs=68.5

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcC---CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCG---AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +.++|+|| +|||.++++.|++.|   ..|++.+|+.++++++.+.+....  +.++..+.+|++|.++++++++..   
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~--~~~~~~~~~D~~d~~~l~~~l~~~---   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG--YGEIDITTVDADSIEELVALINEV---   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT--CCCCEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc--CCceEEEEecCCCHHHHHHHHHhh---
Confidence            46888899 799999999999998   489999999988888777665432  246788999999999988887665   


Q ss_pred             hCCccEEEeCCCCC
Q psy9256         124 FGCLDILINNAGRS  137 (265)
Q Consensus       124 ~g~ldilinnAg~~  137 (265)
                        ++|++|||||..
T Consensus        76 --~~DvVin~ag~~   87 (405)
T 4ina_A           76 --KPQIVLNIALPY   87 (405)
T ss_dssp             --CCSEEEECSCGG
T ss_pred             --CCCEEEECCCcc
Confidence              799999999853

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.47  E-value=1.5e-07  Score=83.65  Aligned_cols=81  Identities=16%  Similarity=0.225  Sum_probs=59.9

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|++++||||++|||.++++.+...|++|++++|++++++.+    ++.+.   .   ..+|.++.+++.+.+..... 
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~---~---~~~d~~~~~~~~~~~~~~~~-  212 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL----KQIGF---D---AAFNYKTVNSLEEALKKASP-  212 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTC---S---EEEETTSCSCHHHHHHHHCT-
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HhcCC---c---EEEecCCHHHHHHHHHHHhC-
Confidence            3689999999999999999999999999999999987666544    22331   1   34588774444444333332 


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                       +++|++|||+|.
T Consensus       213 -~~~d~vi~~~g~  224 (333)
T 1v3u_A          213 -DGYDCYFDNVGG  224 (333)
T ss_dssp             -TCEEEEEESSCH
T ss_pred             -CCCeEEEECCCh
Confidence             689999999993

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.35  E-value=5.3e-07  Score=83.90  Aligned_cols=80  Identities=18%  Similarity=0.170  Sum_probs=60.3

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |++|.++|+| ++|+|.++++.|++.|++|++++|+.++.+++.+.       -.+...+.+|++|.+++.+++      
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~-------~~~~~~~~~Dv~d~~~l~~~l------   66 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG-------VQHSTPISLDVNDDAALDAEV------   66 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT-------CTTEEEEECCTTCHHHHHHHH------
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh-------cCCceEEEeecCCHHHHHHHH------
Confidence            3578899998 79999999999999999999999986554433221       123667889999988776653      


Q ss_pred             hCCccEEEeCCCCCc
Q psy9256         124 FGCLDILINNAGRSQ  138 (265)
Q Consensus       124 ~g~ldilinnAg~~~  138 (265)
                       .++|++||+||...
T Consensus        67 -~~~DvVIn~a~~~~   80 (450)
T 1ff9_A           67 -AKHDLVISLIPYTF   80 (450)
T ss_dssp             -TTSSEEEECCC--C
T ss_pred             -cCCcEEEECCcccc
Confidence             37999999999743

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.29  E-value=1.3e-06  Score=78.10  Aligned_cols=81  Identities=19%  Similarity=0.183  Sum_probs=60.8

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|++++|+|+++|||.++++.+...|++|+.++|++++++.+.    +.+.   .   ..+|.++.+++.+.+.+... 
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~----~~g~---~---~~~d~~~~~~~~~~~~~~~~-  236 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR----SIGG---E---VFIDFTKEKDIVGAVLKATD-  236 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH----HTTC---C---EEEETTTCSCHHHHHHHHHT-
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH----HcCC---c---eEEecCccHhHHHHHHHHhC-
Confidence            36899999999999999999999999999999999887765443    2332   1   23587765555555444433 


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                       +++|++|||+|.
T Consensus       237 -~~~D~vi~~~g~  248 (347)
T 2hcy_A          237 -GGAHGVINVSVS  248 (347)
T ss_dssp             -SCEEEEEECSSC
T ss_pred             -CCCCEEEECCCc
Confidence             379999999995

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.29  E-value=6.5e-06  Score=71.51  Aligned_cols=34  Identities=29%  Similarity=0.409  Sum_probs=31.3

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      .++||||+|=||..++++|.++|++|+.+.|++.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~   35 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG   35 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            3899999999999999999999999999998753

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.27  E-value=2.4e-06  Score=75.90  Aligned_cols=80  Identities=15%  Similarity=0.265  Sum_probs=58.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++||||++|||.++++.+...|++|+.++|++++++.+.+    .+.   .   ..+|.++.+..+.+.+...  .
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~g~---~---~~~d~~~~~~~~~i~~~~~--~  212 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----LGC---H---HTINYSTQDFAEVVREITG--G  212 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTC---S---EEEETTTSCHHHHHHHHHT--T
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---C---EEEECCCHHHHHHHHHHhC--C
Confidence            58999999999999999999999999999999998766655433    332   1   2357776655444432221  1


Q ss_pred             CCccEEEeCCCC
Q psy9256         125 GCLDILINNAGR  136 (265)
Q Consensus       125 g~ldilinnAg~  136 (265)
                      +++|++|||+|.
T Consensus       213 ~~~d~vi~~~g~  224 (333)
T 1wly_A          213 KGVDVVYDSIGK  224 (333)
T ss_dssp             CCEEEEEECSCT
T ss_pred             CCCeEEEECCcH
Confidence            369999999995

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.27  E-value=1.1e-06  Score=76.33  Aligned_cols=78  Identities=17%  Similarity=0.221  Sum_probs=57.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++.+|+++|+|+ +|+|+++++.|++.|++|++++|+.++++++.+.+...    .+     +++.+.+++       .+
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~----~~-----~~~~~~~~~-------~~  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT----GS-----IQALSMDEL-------EG  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG----SS-----EEECCSGGG-------TT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc----CC-----eeEecHHHh-------cc
Confidence            578999999998 69999999999999999999999887776665543221    12     222332221       11


Q ss_pred             HhCCccEEEeCCCCCcc
Q psy9256         123 QFGCLDILINNAGRSQR  139 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~  139 (265)
                        ++.|++|||+|....
T Consensus       179 --~~~DivVn~t~~~~~  193 (271)
T 1nyt_A          179 --HEFDLIINATSSGIS  193 (271)
T ss_dssp             --CCCSEEEECCSCGGG
T ss_pred             --CCCCEEEECCCCCCC
Confidence              789999999998654

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.23  E-value=1.5e-06  Score=76.99  Aligned_cols=79  Identities=15%  Similarity=0.183  Sum_probs=58.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++||||++|||.++++.+...|++|+.++|++++++.+.+    .+.   .   ..+|.++.+..+.+.+...  .
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~---~---~~~~~~~~~~~~~~~~~~~--~  207 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGA---W---QVINYREEDLVERLKEITG--G  207 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTC---S---EEEETTTSCHHHHHHHHTT--T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC---C---EEEECCCccHHHHHHHHhC--C
Confidence            58999999999999999999999999999999998766655443    332   1   2357777655444432211  1


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                      +++|++|||+|
T Consensus       208 ~~~D~vi~~~g  218 (327)
T 1qor_A          208 KKVRVVYDSVG  218 (327)
T ss_dssp             CCEEEEEECSC
T ss_pred             CCceEEEECCc
Confidence            36999999999

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.18  E-value=1.9e-06  Score=77.96  Aligned_cols=78  Identities=15%  Similarity=0.141  Sum_probs=54.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+.+++++|+|+ ++||.++++.+...|++|++++|++++++.+.+.   .+   ..   +.+|.++.+++.+.+    
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~---~g---~~---~~~~~~~~~~l~~~~----  227 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV---FG---GR---VITLTATEANIKKSV----  227 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---TT---TS---EEEEECCHHHHHHHH----
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh---cC---ce---EEEecCCHHHHHHHH----
Confidence            3588999999999 8999999999999999999999987666544332   22   12   345666665544432    


Q ss_pred             HHhCCccEEEeCCCC
Q psy9256         122 QQFGCLDILINNAGR  136 (265)
Q Consensus       122 ~~~g~ldilinnAg~  136 (265)
                         .+.|++||++|.
T Consensus       228 ---~~~DvVi~~~g~  239 (369)
T 2eez_A          228 ---QHADLLIGAVLV  239 (369)
T ss_dssp             ---HHCSEEEECCC-
T ss_pred             ---hCCCEEEECCCC
Confidence               245666666653

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.16  E-value=4.2e-06  Score=75.09  Aligned_cols=78  Identities=18%  Similarity=0.304  Sum_probs=58.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++|+||++|||.++++.+...|++|+.++|++++++.+.    +.+.   .   ..+|.++.+..+.+    .+..
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~g~---~---~~~~~~~~~~~~~~----~~~~  227 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE----KLGA---A---AGFNYKKEDFSEAT----LKFT  227 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HHTC---S---EEEETTTSCHHHHH----HHHT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCC---c---EEEecCChHHHHHH----HHHh
Confidence            5899999999999999999999999999999999877665552    2332   1   23577665544443    3333


Q ss_pred             --CCccEEEeCCCC
Q psy9256         125 --GCLDILINNAGR  136 (265)
Q Consensus       125 --g~ldilinnAg~  136 (265)
                        +++|++|||+|.
T Consensus       228 ~~~~~d~vi~~~G~  241 (354)
T 2j8z_A          228 KGAGVNLILDCIGG  241 (354)
T ss_dssp             TTSCEEEEEESSCG
T ss_pred             cCCCceEEEECCCc
Confidence              369999999994

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.15  E-value=2.1e-06  Score=76.51  Aligned_cols=81  Identities=19%  Similarity=0.296  Sum_probs=58.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++|+||++|+|.++++.+...|++|+.++|++++++.+.+   +.+.   .   ..+|.++.+++.+.+.....  
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~g~---~---~~~d~~~~~~~~~~~~~~~~--  223 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KFGF---D---DAFNYKEESDLTAALKRCFP--  223 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TSCC---S---EEEETTSCSCSHHHHHHHCT--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCC---c---eEEecCCHHHHHHHHHHHhC--
Confidence            68999999999999999999999999999999998766654432   2231   1   23477665444443333321  


Q ss_pred             CCccEEEeCCCC
Q psy9256         125 GCLDILINNAGR  136 (265)
Q Consensus       125 g~ldilinnAg~  136 (265)
                      +++|++|+|+|.
T Consensus       224 ~~~d~vi~~~g~  235 (345)
T 2j3h_A          224 NGIDIYFENVGG  235 (345)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCCcEEEECCCH
Confidence            579999999994

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.11  E-value=1.6e-06  Score=66.68  Aligned_cols=78  Identities=12%  Similarity=0.174  Sum_probs=55.3

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++++.++|+|+ +++|..+++.|.+.|++|++++|+++..+.+.+         .....+..|.++++.+.++      
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~---------~~~~~~~~d~~~~~~l~~~------   66 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---------YATHAVIANATEENELLSL------   66 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT---------TCSEEEECCTTCHHHHHTT------
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---------hCCEEEEeCCCCHHHHHhc------
Confidence            456778999998 999999999999999999999987654332211         1234567888886544322      


Q ss_pred             HhCCccEEEeCCCC
Q psy9256         123 QFGCLDILINNAGR  136 (265)
Q Consensus       123 ~~g~ldilinnAg~  136 (265)
                      ..++.|++|++++.
T Consensus        67 ~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 GIRNFEYVIVAIGA   80 (144)
T ss_dssp             TGGGCSEEEECCCS
T ss_pred             CCCCCCEEEECCCC
Confidence            24678999999983

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.11  E-value=2.1e-05  Score=60.79  Aligned_cols=75  Identities=15%  Similarity=0.278  Sum_probs=57.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .++.++|+|+ +.+|..+++.|.+.|++|++++++++..+++.+         ....++..|.++++.+.++      ..
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~---------~~~~~~~gd~~~~~~l~~~------~~   68 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED---------EGFDAVIADPTDESFYRSL------DL   68 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---------TTCEEEECCTTCHHHHHHS------CC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH---------CCCcEEECCCCCHHHHHhC------Cc
Confidence            4567999998 669999999999999999999998776655443         1356788999998876543      23


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                      .+.|.+|...+
T Consensus        69 ~~~d~vi~~~~   79 (141)
T 3llv_A           69 EGVSAVLITGS   79 (141)
T ss_dssp             TTCSEEEECCS
T ss_pred             ccCCEEEEecC
Confidence            46777777766

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.10  E-value=1.8e-05  Score=70.17  Aligned_cols=85  Identities=19%  Similarity=0.196  Sum_probs=60.2

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecC---CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARS---SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      ..++.||+++|+|+ +|+|+++++.|++.|+ +|++++|+   .++.+++.+++....  +  ..+...+..+.+++.  
T Consensus       149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~--~--~~~~~~~~~~~~~l~--  221 (315)
T 3tnl_A          149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT--D--CKAQLFDIEDHEQLR--  221 (315)
T ss_dssp             TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS--S--CEEEEEETTCHHHHH--
T ss_pred             CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc--C--CceEEeccchHHHHH--
Confidence            35688999999998 6999999999999999 89999999   555555555554432  1  223344555544332  


Q ss_pred             HHHHHHHhCCccEEEeCCCCC
Q psy9256         117 FDAVIQQFGCLDILINNAGRS  137 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~  137 (265)
                           +.....|++||.....
T Consensus       222 -----~~l~~aDiIINaTp~G  237 (315)
T 3tnl_A          222 -----KEIAESVIFTNATGVG  237 (315)
T ss_dssp             -----HHHHTCSEEEECSSTT
T ss_pred             -----hhhcCCCEEEECccCC
Confidence                 2345689999988653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.10  E-value=5.1e-06  Score=73.79  Aligned_cols=80  Identities=18%  Similarity=0.235  Sum_probs=58.6

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -+|++++|+||++|||.+.++.+...|++|+.++|++++++.+.+   +.+.   .   ...|.++.+..+.+    .+.
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~---~---~~~~~~~~~~~~~~----~~~  214 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---ELGF---D---GAIDYKNEDLAAGL----KRE  214 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCC---S---EEEETTTSCHHHHH----HHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCC---C---EEEECCCHHHHHHH----HHh
Confidence            368999999999999999999999999999999998776655422   2331   1   23566665544443    333


Q ss_pred             h-CCccEEEeCCCC
Q psy9256         124 F-GCLDILINNAGR  136 (265)
Q Consensus       124 ~-g~ldilinnAg~  136 (265)
                      . +++|++|+|+|.
T Consensus       215 ~~~~~d~vi~~~g~  228 (336)
T 4b7c_A          215 CPKGIDVFFDNVGG  228 (336)
T ss_dssp             CTTCEEEEEESSCH
T ss_pred             cCCCceEEEECCCc
Confidence            3 579999999994

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.09  E-value=3.8e-06  Score=75.27  Aligned_cols=78  Identities=13%  Similarity=0.184  Sum_probs=56.7

Q ss_pred             CC--cEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          45 NN--KVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        45 ~g--k~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .|  ++++||||++|||.++++.+...|+ +|+.+++++++++.+.++   .+.   .   ..+|.++.+..+.+    .
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~---~---~~~d~~~~~~~~~~----~  224 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGF---D---AAINYKKDNVAEQL----R  224 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCC---S---EEEETTTSCHHHHH----H
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCC---c---eEEecCchHHHHHH----H
Confidence            47  9999999999999999999999999 999999987665544331   331   1   23577665433333    3


Q ss_pred             HHh-CCccEEEeCCC
Q psy9256         122 QQF-GCLDILINNAG  135 (265)
Q Consensus       122 ~~~-g~ldilinnAg  135 (265)
                      +.. +++|++|||+|
T Consensus       225 ~~~~~~~d~vi~~~G  239 (357)
T 2zb4_A          225 ESCPAGVDVYFDNVG  239 (357)
T ss_dssp             HHCTTCEEEEEESCC
T ss_pred             HhcCCCCCEEEECCC
Confidence            333 37999999999

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.09  E-value=8.8e-06  Score=72.95  Aligned_cols=78  Identities=23%  Similarity=0.319  Sum_probs=58.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++|+||++|+|.++++.+...|++|+.++|++++++.+    .+.+.   .   ..+|.++.+..+.+    .+..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga---~---~~~d~~~~~~~~~~----~~~~  235 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGA---H---EVFNHREVNYIDKI----KKYV  235 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTC---S---EEEETTSTTHHHHH----HHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH----HHcCC---C---EEEeCCCchHHHHH----HHHc
Confidence            589999999999999999999999999999999987666533    23332   1   23577765544433    3334


Q ss_pred             --CCccEEEeCCCC
Q psy9256         125 --GCLDILINNAGR  136 (265)
Q Consensus       125 --g~ldilinnAg~  136 (265)
                        +++|++|||+|.
T Consensus       236 ~~~~~D~vi~~~G~  249 (351)
T 1yb5_A          236 GEKGIDIIIEMLAN  249 (351)
T ss_dssp             CTTCEEEEEESCHH
T ss_pred             CCCCcEEEEECCCh
Confidence              379999999994

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.08  E-value=6.3e-06  Score=76.98  Aligned_cols=79  Identities=15%  Similarity=0.190  Sum_probs=60.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +++++.++|+|+ +|+|.++++.|++. |++|++++|+.++++++.+.        ..+..+.+|++|.+++.+++    
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~--------~~~~~~~~D~~d~~~l~~~l----   86 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP--------SGSKAISLDVTDDSALDKVL----   86 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG--------GTCEEEECCTTCHHHHHHHH----
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh--------cCCcEEEEecCCHHHHHHHH----
Confidence            566789999997 99999999999998 78999999987666554332        12456788999987766553    


Q ss_pred             HHhCCccEEEeCCCCC
Q psy9256         122 QQFGCLDILINNAGRS  137 (265)
Q Consensus       122 ~~~g~ldilinnAg~~  137 (265)
                         .+.|++||+++..
T Consensus        87 ---~~~DvVIn~tp~~   99 (467)
T 2axq_A           87 ---ADNDVVISLIPYT   99 (467)
T ss_dssp             ---HTSSEEEECSCGG
T ss_pred             ---cCCCEEEECCchh
Confidence               2689999999964

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.06  E-value=8.3e-06  Score=72.82  Aligned_cols=78  Identities=18%  Similarity=0.240  Sum_probs=57.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|++++|+|+++|+|.+.+..+... |++|+.+++++++++.+++    .+.   .   ..+|.++.+..+.+    .+.
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~g~---~---~~~~~~~~~~~~~~----~~~  235 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGA---D---YVINASMQDPLAEI----RRI  235 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTC---S---EEEETTTSCHHHHH----HHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC---C---EEecCCCccHHHHH----HHH
Confidence            6899999999999999999999998 9999999998776655432    332   1   23466665443333    233


Q ss_pred             h--CCccEEEeCCCC
Q psy9256         124 F--GCLDILINNAGR  136 (265)
Q Consensus       124 ~--g~ldilinnAg~  136 (265)
                      .  +++|++|||+|.
T Consensus       236 ~~~~~~d~vi~~~g~  250 (347)
T 1jvb_A          236 TESKGVDAVIDLNNS  250 (347)
T ss_dssp             TTTSCEEEEEESCCC
T ss_pred             hcCCCceEEEECCCC
Confidence            3  589999999995

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.00  E-value=5e-05  Score=65.28  Aligned_cols=91  Identities=18%  Similarity=0.104  Sum_probs=71.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-..+.++.+.+.|.++....-+-...+.+.+..++.                           .+++
T Consensus        32 ~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~~~   84 (255)
T 4g81_D           32 AGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKL---------------------------DAEG   84 (255)
T ss_dssp             TTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH---------------------------HHTT
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH---------------------------HHHC
Confidence            5778899988877778888899888888776655555555554443322                           4678


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++|+..++.|.....
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~  122 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAF  122 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence            99999999999999999999999999999988886544

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.94  E-value=1.5e-05  Score=71.43  Aligned_cols=79  Identities=22%  Similarity=0.289  Sum_probs=58.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++|+||++|+|.+.+..+...|++|+.+++++++++.+++    .+.   .   ..+|.++.+..+.+.+..   .
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa---~---~~~~~~~~~~~~~~~~~~---~  233 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LGA---K---RGINYRSEDFAAVIKAET---G  233 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTC---S---EEEETTTSCHHHHHHHHH---S
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCC---C---EEEeCCchHHHHHHHHHh---C
Confidence            68999999999999999999999999999999998877765543    332   1   224666655444432222   3


Q ss_pred             CCccEEEeCCCC
Q psy9256         125 GCLDILINNAGR  136 (265)
Q Consensus       125 g~ldilinnAg~  136 (265)
                      +++|++|+|+|.
T Consensus       234 ~g~Dvvid~~g~  245 (353)
T 4dup_A          234 QGVDIILDMIGA  245 (353)
T ss_dssp             SCEEEEEESCCG
T ss_pred             CCceEEEECCCH
Confidence            579999999994

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.94  E-value=0.00013  Score=62.58  Aligned_cols=91  Identities=14%  Similarity=0.203  Sum_probs=69.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-..++++.+...|.++....-+-...+.+.+..++.                           .+++
T Consensus        30 ~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~---------------------------~~~~   82 (254)
T 4fn4_A           30 NDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRT---------------------------FETY   82 (254)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH---------------------------HHHH
T ss_pred             cCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH---------------------------HHHc
Confidence            5777888887777777888888888888777666666666655544332                           4678


Q ss_pred             CCccEEEeCCCCCcc-cccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQR-AAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+... ..+.+.+.++|+..+..|-....
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~  121 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAF  121 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence            999999999998754 56889999999999988876544

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.93  E-value=2.1e-05  Score=70.08  Aligned_cols=77  Identities=25%  Similarity=0.334  Sum_probs=57.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++|+|+++|+|.+.++.+...|++|+.+++++++++.+.+    .+.   .   ..+|.++.+..+.    +.+..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~ga---~---~~~d~~~~~~~~~----~~~~~  231 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA----LGA---D---ETVNYTHPDWPKE----VRRLT  231 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTC---S---EEEETTSTTHHHH----HHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC---C---EEEcCCcccHHHH----HHHHh
Confidence            58999999999999999999999999999999998776665532    332   1   1257766543332    33333


Q ss_pred             --CCccEEEeCCC
Q psy9256         125 --GCLDILINNAG  135 (265)
Q Consensus       125 --g~ldilinnAg  135 (265)
                        +++|++|+|+|
T Consensus       232 ~~~~~d~vi~~~g  244 (343)
T 2eih_A          232 GGKGADKVVDHTG  244 (343)
T ss_dssp             TTTCEEEEEESSC
T ss_pred             CCCCceEEEECCC
Confidence              37999999999

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.91  E-value=5.2e-05  Score=66.15  Aligned_cols=82  Identities=20%  Similarity=0.214  Sum_probs=59.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++.+|+++|+|+ +|+|+++++.|++.|+ +|++++|+.++.+++.+.+.....   ...+...+..+.   ..     
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~---~~~i~~~~~~~l---~~-----  190 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG---REAVVGVDARGI---ED-----  190 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT---SCCEEEECSTTH---HH-----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC---CceEEEcCHHHH---HH-----
Confidence            4688999999998 7999999999999999 699999999888888777665421   112223333232   21     


Q ss_pred             HHHhCCccEEEeCCCCC
Q psy9256         121 IQQFGCLDILINNAGRS  137 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~  137 (265)
                        .....|++||.....
T Consensus       191 --~l~~~DiVInaTp~G  205 (283)
T 3jyo_A          191 --VIAAADGVVNATPMG  205 (283)
T ss_dssp             --HHHHSSEEEECSSTT
T ss_pred             --HHhcCCEEEECCCCC
Confidence              123469999988653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=97.89  E-value=2.6e-05  Score=69.23  Aligned_cols=34  Identities=26%  Similarity=0.266  Sum_probs=29.8

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCC-------eEEEEecCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGA-------KLVLSARSS   80 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~-------~V~~~~r~~   80 (265)
                      +.++||||++.||..++++|+++|.       .|++.++.+
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~   45 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ   45 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence            3699999999999999999999886       788888754

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.82  E-value=3.8e-05  Score=70.92  Aligned_cols=86  Identities=23%  Similarity=0.284  Sum_probs=60.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEee--cCC---------ChHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL--DVT---------QTKY  112 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--D~~---------~~~~  112 (265)
                      -.|++++|+||++|||.+.+..+...|++|+++++++++++.+    ++.+.   ...+-..  |..         +.++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~----~~lGa---~~~i~~~~~~~~~~~~~~~~~~~~~  291 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV----RALGC---DLVINRAELGITDDIADDPRRVVET  291 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTC---CCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCC---CEEEecccccccccccccccccchh
Confidence            4689999999999999999998889999999999877666544    33442   1111111  111         1234


Q ss_pred             HHHHHHHHHHHhC-CccEEEeCCCC
Q psy9256         113 HRRCFDAVIQQFG-CLDILINNAGR  136 (265)
Q Consensus       113 ~~~~~~~~~~~~g-~ldilinnAg~  136 (265)
                      .+.+.+.+.+.+| ++|++|+|+|.
T Consensus       292 ~~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          292 GRKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             hhHHHHHHHHHhCCCceEEEECCCc
Confidence            5556677777775 69999999994

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.81  E-value=1.9e-05  Score=70.45  Aligned_cols=78  Identities=27%  Similarity=0.362  Sum_probs=56.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|++++|+||++|+|.+.+..+...|++|+.+++++++.+.+++    .+.  ..    ..|.. .+    +.+.+.+.
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga--~~----v~~~~-~~----~~~~v~~~  222 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----VGA--DI----VLPLE-EG----WAKAVREA  222 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTC--SE----EEESS-TT----HHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCC--cE----EecCc-hh----HHHHHHHH
Confidence            368999999999999999999999999999999998888765544    332  11    12433 22    23344555


Q ss_pred             hC--CccEEEeCCCC
Q psy9256         124 FG--CLDILINNAGR  136 (265)
Q Consensus       124 ~g--~ldilinnAg~  136 (265)
                      .+  ++|++|+|+|.
T Consensus       223 ~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          223 TGGAGVDMVVDPIGG  237 (342)
T ss_dssp             TTTSCEEEEEESCC-
T ss_pred             hCCCCceEEEECCch
Confidence            53  69999999995

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.81  E-value=1.5e-05  Score=69.12  Aligned_cols=78  Identities=22%  Similarity=0.275  Sum_probs=56.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++.+|+++|+|+ +|+|+++++.|++.|++|++++|+.++.+++.+.+...+    ++.  ..|+   +++.       +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~----~~~--~~~~---~~~~-------~  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG----NIQ--AVSM---DSIP-------L  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS----CEE--EEEG---GGCC-------C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC----CeE--EeeH---HHhc-------c
Confidence            578999999998 799999999999999999999999887777766543211    221  2232   1110       1


Q ss_pred             HhCCccEEEeCCCCCcc
Q psy9256         123 QFGCLDILINNAGRSQR  139 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~  139 (265)
                        ++.|++||+++....
T Consensus       179 --~~~DivIn~t~~~~~  193 (272)
T 1p77_A          179 --QTYDLVINATSAGLS  193 (272)
T ss_dssp             --SCCSEEEECCCC---
T ss_pred             --CCCCEEEECCCCCCC
Confidence              589999999998644

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.76  E-value=8.2e-05  Score=66.12  Aligned_cols=79  Identities=20%  Similarity=0.271  Sum_probs=58.9

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -+|++++|+||++|+|.+.+..+...|++|+.+++++++++.+++    .+.   .   ...|.++.+..+    .+.+.
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga---~---~~~~~~~~~~~~----~~~~~  208 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGA---A---YVIDTSTAPLYE----TVMEL  208 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTC---S---EEEETTTSCHHH----HHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCC---c---EEEeCCcccHHH----HHHHH
Confidence            368999999999999999999888899999999999988876654    332   1   224655544333    33444


Q ss_pred             h--CCccEEEeCCCC
Q psy9256         124 F--GCLDILINNAGR  136 (265)
Q Consensus       124 ~--g~ldilinnAg~  136 (265)
                      .  .++|++|+|+|.
T Consensus       209 ~~~~g~Dvvid~~g~  223 (340)
T 3gms_A          209 TNGIGADAAIDSIGG  223 (340)
T ss_dssp             TTTSCEEEEEESSCH
T ss_pred             hCCCCCcEEEECCCC
Confidence            4  379999999994

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.75  E-value=4.5e-05  Score=67.40  Aligned_cols=79  Identities=20%  Similarity=0.296  Sum_probs=58.3

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -+|++++|+||++|+|.+.+..+...|++|+.+++++++++.+++    .+.   .   ...|.++.+..+.    +.+.
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga---~---~~~~~~~~~~~~~----~~~~  204 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA----LGA---W---ETIDYSHEDVAKR----VLEL  204 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTC---S---EEEETTTSCHHHH----HHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---C---EEEeCCCccHHHH----HHHH
Confidence            368999999999999999999999999999999998777665543    332   1   2346555544333    3444


Q ss_pred             h--CCccEEEeCCCC
Q psy9256         124 F--GCLDILINNAGR  136 (265)
Q Consensus       124 ~--g~ldilinnAg~  136 (265)
                      .  .++|++|+|+|.
T Consensus       205 ~~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          205 TDGKKCPVVYDGVGQ  219 (325)
T ss_dssp             TTTCCEEEEEESSCG
T ss_pred             hCCCCceEEEECCCh
Confidence            4  369999999995

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.73  E-value=3.4e-05  Score=68.43  Aligned_cols=79  Identities=22%  Similarity=0.318  Sum_probs=57.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -+|++++|+||++|+|.+.+..+...|++|+.+++++++++.++    +.+.   .   ...|.++.+..+.    +.+.
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~ga---~---~~~~~~~~~~~~~----~~~~  212 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK----EYGA---E---YLINASKEDILRQ----VLKF  212 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTC---S---EEEETTTSCHHHH----HHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCC---c---EEEeCCCchHHHH----HHHH
Confidence            36899999999999999999999999999999999877665433    3332   1   2345555443333    3444


Q ss_pred             h--CCccEEEeCCCC
Q psy9256         124 F--GCLDILINNAGR  136 (265)
Q Consensus       124 ~--g~ldilinnAg~  136 (265)
                      .  .++|++|+|+|.
T Consensus       213 ~~~~g~D~vid~~g~  227 (334)
T 3qwb_A          213 TNGKGVDASFDSVGK  227 (334)
T ss_dssp             TTTSCEEEEEECCGG
T ss_pred             hCCCCceEEEECCCh
Confidence            4  369999999994

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.72  E-value=0.00017  Score=63.71  Aligned_cols=84  Identities=17%  Similarity=0.155  Sum_probs=57.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecC---CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARS---SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      .++.||.++|+|+ +|.|++++..|++.|+ +|++++|+   .++.+++.+++....  +..  +...+..+.+..    
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~--~~~--v~~~~~~~l~~~----  214 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT--DCV--VTVTDLADQHAF----  214 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS--SCE--EEEEETTCHHHH----
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc--Ccc--eEEechHhhhhh----
Confidence            5678999999998 7999999999999998 79999999   555555555554332  122  233444443221    


Q ss_pred             HHHHHHhCCccEEEeCCCCC
Q psy9256         118 DAVIQQFGCLDILINNAGRS  137 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~  137 (265)
                         .+.....|++||+....
T Consensus       215 ---~~~l~~~DiIINaTp~G  231 (312)
T 3t4e_A          215 ---TEALASADILTNGTKVG  231 (312)
T ss_dssp             ---HHHHHHCSEEEECSSTT
T ss_pred             ---HhhccCceEEEECCcCC
Confidence               12223469999987764

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.70  E-value=0.00024  Score=78.82  Aligned_cols=80  Identities=10%  Similarity=0.003  Sum_probs=68.1

Q ss_pred             CCceeeeeccccChhHHHHHHHHHHh----hcccccEEEecccc----ccc-ccccccchHHHHhhhhhhhhHHHHHHHH
Q psy9256         159 RPSIYTLTLDVTQTKYHRRCFDAVIQ----QFGCLDILINNAGR----SQR-AAWEDIELEVDRELFELNVFSVLSLSRI  229 (265)
Q Consensus       159 ~~~v~~~~~dv~~~~~v~~~~~~i~~----~~g~ldilVnnAG~----~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~  229 (265)
                      ..++..+.||++|+++++++++++.+    ++|++|+||||||+    ... ....+.+.++|++.++.|+...+..+..
T Consensus      2190 G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~ 2269 (3089)
T 3zen_D         2190 DATLWVVPANMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQR 2269 (3089)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHH
T ss_pred             CCeEEEEEecCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            35788899999999999999999998    89999999999998    222 3456678889999999999999998888


Q ss_pred             HHHHhhhhc
Q psy9256         230 ATSYFLARE  238 (265)
Q Consensus       230 ~~p~l~~~~  238 (265)
                      +...+...-
T Consensus      2270 l~~~~~~~m 2278 (3089)
T 3zen_D         2270 LISGLSKIG 2278 (3089)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            888876553

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.67  E-value=0.00067  Score=57.90  Aligned_cols=87  Identities=14%  Similarity=0.189  Sum_probs=61.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+    ..-...+++++.++....-+-...+...+..++                       .    .+++
T Consensus        25 ~Ga~V~~~~~~----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~-----------------------~----~~~~   73 (247)
T 3ged_A           25 AGDKVCFIDID----EKRSADFAKERPNLFYFHGDVADPLTLKKFVEY-----------------------A----MEKL   73 (247)
T ss_dssp             TTCEEEEEESC----HHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCCEEEEEeCC----HHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHH-----------------------H----HHHc
Confidence            46667777654    344455666666666555555555554444332                       2    4678


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++++..++.|.....
T Consensus        74 g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~  111 (247)
T 3ged_A           74 QRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPY  111 (247)
T ss_dssp             SCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH
Confidence            99999999999999999999999999999988876554

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.66  E-value=8.7e-05  Score=66.66  Aligned_cols=75  Identities=17%  Similarity=0.294  Sum_probs=53.6

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC---CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS---SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +.|++++|+|+ +|+|...+..+...|++|+.+++++   ++.+.+    .+.+     ...+  | .+ +..+.+.+  
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----~~~g-----a~~v--~-~~-~~~~~~~~--  242 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI----EETK-----TNYY--N-SS-NGYDKLKD--  242 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH----HHHT-----CEEE--E-CT-TCSHHHHH--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH----HHhC-----Ccee--c-hH-HHHHHHHH--
Confidence            44999999999 9999999999988999999999987   554333    2333     2223  5 44 32333322  


Q ss_pred             HHHhCCccEEEeCCCC
Q psy9256         121 IQQFGCLDILINNAGR  136 (265)
Q Consensus       121 ~~~~g~ldilinnAg~  136 (265)
                      . . ++.|++|+++|.
T Consensus       243 ~-~-~~~d~vid~~g~  256 (366)
T 2cdc_A          243 S-V-GKFDVIIDATGA  256 (366)
T ss_dssp             H-H-CCEEEEEECCCC
T ss_pred             h-C-CCCCEEEECCCC
Confidence            1 2 789999999995

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.65  E-value=0.00023  Score=61.72  Aligned_cols=88  Identities=22%  Similarity=0.288  Sum_probs=59.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.|++++-+..-..+.++++   |.++....-+....+.+.+..++                       .    .+++
T Consensus        52 ~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~  101 (273)
T 4fgs_A           52 EGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEK-----------------------V----KAEA  101 (273)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHH-----------------------H----HHHc
Confidence            5778888876544333344433   44444443344444444443322                       2    4678


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++|+..++.|.....
T Consensus       102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~  139 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVL  139 (273)
T ss_dssp             SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHH
Confidence            99999999999999999999999999999988876544

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.64  E-value=7.5e-05  Score=65.94  Aligned_cols=98  Identities=13%  Similarity=0.127  Sum_probs=64.8

Q ss_pred             ccCCcE-EEEcCCCC-----------------c-hhHHHHHHHHHcCCeEEEEecCCCcHHH-----HHHHHHHh---CC
Q psy9256          43 YFNNKV-VWITGASS-----------------G-IGEALALQLSKCGAKLVLSARSSSNLER-----VKNLCVQA---GA   95 (265)
Q Consensus        43 ~l~gk~-vlItGas~-----------------G-IG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~~---~~   95 (265)
                      ++.||. ++||+|++                 | +|.++|+.+++.|+.|+++.+..+-...     ....+...   ..
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            468888 99998876                 7 9999999999999999999875331110     00001100   01


Q ss_pred             CCCcEEEEeecCCChHHHHHHHHHH------------------------------HHHhCCccEEEeCCCCCccc
Q psy9256          96 HPQSIYTLTLDVTQTKYHRRCFDAV------------------------------IQQFGCLDILINNAGRSQRA  140 (265)
Q Consensus        96 ~~~~~~~~~~D~~~~~~~~~~~~~~------------------------------~~~~g~ldilinnAg~~~~~  140 (265)
                      .+.....+..|+.+.+...+.+...                              .+.+++.|++|.+|+++.-.
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence            1233456677777776666655443                              24468899999999997544

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.59  E-value=0.00023  Score=65.98  Aligned_cols=86  Identities=23%  Similarity=0.234  Sum_probs=62.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEe--ec--------CCChHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT--LD--------VTQTKYH  113 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~D--------~~~~~~~  113 (265)
                      -.|++++|+||++|+|...+..+...|++|+++++++++++.++    +.+.   ...+-.  .|        .++.++.
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~----~lGa---~~vi~~~~~d~~~~~~~~~~~~~~~  299 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR----AMGA---EAIIDRNAEGYRFWKDENTQDPKEW  299 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HHTC---CEEEETTTTTCCSEEETTEECHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH----hhCC---cEEEecCcCcccccccccccchHHH
Confidence            46899999999999999999888889999999988776665443    3442   111111  11        2345566


Q ss_pred             HHHHHHHHHHhC--CccEEEeCCCC
Q psy9256         114 RRCFDAVIQQFG--CLDILINNAGR  136 (265)
Q Consensus       114 ~~~~~~~~~~~g--~ldilinnAg~  136 (265)
                      +++.+.+++..+  +.|++|+++|.
T Consensus       300 ~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          300 KRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            777788888774  79999999994

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.57  E-value=0.00019  Score=63.74  Aligned_cols=77  Identities=19%  Similarity=0.226  Sum_probs=55.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++|+|+ +|+|...+..+...|++|+.+++++++++.++    +.+.   .   ..+|.++.+..+.+    .+..
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa---~---~~~d~~~~~~~~~~----~~~~  228 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----ELGA---D---LVVNPLKEDAAKFM----KEKV  228 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTC---S---EEECTTTSCHHHHH----HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HCCC---C---EEecCCCccHHHHH----HHHh
Confidence            5889999999 88999999999899999999999877665443    3332   1   23566654433332    2223


Q ss_pred             CCccEEEeCCCC
Q psy9256         125 GCLDILINNAGR  136 (265)
Q Consensus       125 g~ldilinnAg~  136 (265)
                      ++.|++|+++|.
T Consensus       229 ~~~d~vid~~g~  240 (339)
T 1rjw_A          229 GGVHAAVVTAVS  240 (339)
T ss_dssp             SSEEEEEESSCC
T ss_pred             CCCCEEEECCCC
Confidence            789999999995

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.55  E-value=0.00024  Score=63.24  Aligned_cols=77  Identities=13%  Similarity=0.203  Sum_probs=56.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh-
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF-  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-  124 (265)
                      +++++|+||++|+|.+.+..+...|++|+.+++++++++.+++    .+.   .   ...|..+.+..+.+    .+.. 
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----~Ga---~---~~~~~~~~~~~~~v----~~~~~  230 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD----IGA---A---HVLNEKAPDFEATL----REVMK  230 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH----HTC---S---EEEETTSTTHHHHH----HHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---C---EEEECCcHHHHHHH----HHHhc
Confidence            4899999999999999999888899999999998888766543    332   1   22455554433333    3333 


Q ss_pred             -CCccEEEeCCCC
Q psy9256         125 -GCLDILINNAGR  136 (265)
Q Consensus       125 -g~ldilinnAg~  136 (265)
                       .++|++++++|.
T Consensus       231 ~~g~D~vid~~g~  243 (349)
T 3pi7_A          231 AEQPRIFLDAVTG  243 (349)
T ss_dssp             HHCCCEEEESSCH
T ss_pred             CCCCcEEEECCCC
Confidence             379999999994

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.54  E-value=0.00012  Score=65.83  Aligned_cols=78  Identities=17%  Similarity=0.259  Sum_probs=55.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++|+||++|+|...+..+...|++|+.+++++++++.+++    .+.   .   ...|.++.+..+    .+++..
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga---~---~~~~~~~~~~~~----~~~~~~  228 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGC---D---RPINYKTEPVGT----VLKQEY  228 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC---S---EEEETTTSCHHH----HHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCC---c---EEEecCChhHHH----HHHHhc
Confidence            58999999999999999999998999999999998766654433    332   1   123554433222    223333


Q ss_pred             -CCccEEEeCCCC
Q psy9256         125 -GCLDILINNAGR  136 (265)
Q Consensus       125 -g~ldilinnAg~  136 (265)
                       ++.|++|+|+|.
T Consensus       229 ~~g~D~vid~~g~  241 (362)
T 2c0c_A          229 PEGVDVVYESVGG  241 (362)
T ss_dssp             TTCEEEEEECSCT
T ss_pred             CCCCCEEEECCCH
Confidence             479999999994

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.47  E-value=0.0016  Score=50.81  Aligned_cols=78  Identities=9%  Similarity=0.145  Sum_probs=54.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ..+.++|.|+ +.+|..+++.|.+.|++|+++++++ +..+.+.+..      .....++..|.++++.+.+.      .
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~------~~~~~~i~gd~~~~~~l~~a------~   68 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL------GDNADVIPGDSNDSSVLKKA------G   68 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH------CTTCEEEESCTTSHHHHHHH------T
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh------cCCCeEEEcCCCCHHHHHHc------C
Confidence            4567888886 9999999999999999999999974 3333333221      12466788999998765543      2


Q ss_pred             hCCccEEEeCCC
Q psy9256         124 FGCLDILINNAG  135 (265)
Q Consensus       124 ~g~ldilinnAg  135 (265)
                      ..+-|.+|...+
T Consensus        69 i~~ad~vi~~~~   80 (153)
T 1id1_A           69 IDRCRAILALSD   80 (153)
T ss_dssp             TTTCSEEEECSS
T ss_pred             hhhCCEEEEecC
Confidence            345666665554

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.46  E-value=0.00025  Score=61.82  Aligned_cols=73  Identities=16%  Similarity=0.264  Sum_probs=53.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCC-hHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ-TKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~  123 (265)
                      .|++++|+|+++|+|.+.+..+...|++|+.+++++++.+.+++    .+.   .   ...|..+ .+..+        .
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga---~---~~~~~~~~~~~~~--------~  186 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGA---E---EAATYAEVPERAK--------A  186 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTC---S---EEEEGGGHHHHHH--------H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC---C---EEEECCcchhHHH--------H
Confidence            58999999999999999999988899999999998887765532    332   1   1235444 22211        1


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                      .++.|++|+ +|.
T Consensus       187 ~~~~d~vid-~g~  198 (302)
T 1iz0_A          187 WGGLDLVLE-VRG  198 (302)
T ss_dssp             TTSEEEEEE-CSC
T ss_pred             hcCceEEEE-CCH
Confidence            268999999 984

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=97.43  E-value=8.8e-05  Score=65.68  Aligned_cols=57  Identities=7%  Similarity=0.096  Sum_probs=49.1

Q ss_pred             EeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCC--cccccchhhhHHHHHhhhcccC
Q psy9256         103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS--QRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       103 ~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~--~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +.+|++|+++++++++.+.+.+|++|+||||||+.  ....+.+.+.+.++..+..|..
T Consensus        90 ~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~  148 (329)
T 3lt0_A           90 KRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSY  148 (329)
T ss_dssp             HHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTH
T ss_pred             ccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhH
Confidence            67899999999999999999999999999999985  3557778888888877776654

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.41  E-value=0.00013  Score=63.96  Aligned_cols=79  Identities=16%  Similarity=0.244  Sum_probs=56.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++.+|+++|+|+ +|+|+++++.|++.|+ +|++++|+.++.+++.+.+   +....+       +.+.+       ...
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~---~~~~~~-------~~~~~-------~~~  199 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG---DERRSA-------YFSLA-------EAE  199 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS---CSSSCC-------EECHH-------HHH
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh---hhccCc-------eeeHH-------HHH
Confidence            578999999998 6899999999999998 8999999877766555432   211001       11111       233


Q ss_pred             HHhCCccEEEeCCCCCcc
Q psy9256         122 QQFGCLDILINNAGRSQR  139 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~  139 (265)
                      +..++.|++||+.+....
T Consensus       200 ~~~~~aDivIn~t~~~~~  217 (297)
T 2egg_A          200 TRLAEYDIIINTTSVGMH  217 (297)
T ss_dssp             HTGGGCSEEEECSCTTCS
T ss_pred             hhhccCCEEEECCCCCCC
Confidence            445789999999997543

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.40  E-value=0.0006  Score=59.32  Aligned_cols=76  Identities=17%  Similarity=0.295  Sum_probs=55.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++.+|+++|+|+ +|+|+++++.|++.|+ +|++++|+.++.+++.+.+...+    .+.....  .+.          
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~----~~~~~~~--~~l----------  184 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG----EVKAQAF--EQL----------  184 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS----CEEEEEG--GGC----------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC----CeeEeeH--HHh----------
Confidence            4678999999998 6999999999999996 89999999888777766654321    2322221  111          


Q ss_pred             HHHhCCccEEEeCCCCC
Q psy9256         121 IQQFGCLDILINNAGRS  137 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~  137 (265)
                         ....|++||+.+..
T Consensus       185 ---~~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 ---KQSYDVIINSTSAS  198 (281)
T ss_dssp             ---CSCEEEEEECSCCC
T ss_pred             ---cCCCCEEEEcCcCC
Confidence               04689999988664

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.38  E-value=0.00034  Score=62.25  Aligned_cols=75  Identities=21%  Similarity=0.351  Sum_probs=52.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++|+||++|+|.+.+..+...|++|+.+ +++++++.+    ++.+.   .  .  +| .+.+..+.    +.+..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~----~~lGa---~--~--i~-~~~~~~~~----~~~~~  212 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV----RDLGA---T--P--ID-ASREPEDY----AAEHT  212 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH----HHHTS---E--E--EE-TTSCHHHH----HHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH----HHcCC---C--E--ec-cCCCHHHH----HHHHh
Confidence            68999999999999999999999999999988 766555433    33442   1  1  45 33332222    23333


Q ss_pred             --CCccEEEeCCCC
Q psy9256         125 --GCLDILINNAGR  136 (265)
Q Consensus       125 --g~ldilinnAg~  136 (265)
                        .++|++++++|.
T Consensus       213 ~~~g~D~vid~~g~  226 (343)
T 3gaz_A          213 AGQGFDLVYDTLGG  226 (343)
T ss_dssp             TTSCEEEEEESSCT
T ss_pred             cCCCceEEEECCCc
Confidence              369999999993

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.37  E-value=0.0016  Score=50.20  Aligned_cols=76  Identities=14%  Similarity=0.241  Sum_probs=54.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ++++ .++|.|+ +.+|..+++.|.+.|++|++++++++..+++.+         ....++..|.++++.+.++      
T Consensus         5 ~~~~-~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~---------~g~~~i~gd~~~~~~l~~a------   67 (140)
T 3fwz_A            5 DICN-HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE---------RGVRAVLGNAANEEIMQLA------   67 (140)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---------TTCEEEESCTTSHHHHHHT------
T ss_pred             cCCC-CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---------cCCCEEECCCCCHHHHHhc------
Confidence            4444 4666687 779999999999999999999998877665543         2355688899998765543      


Q ss_pred             HhCCccEEEeCCC
Q psy9256         123 QFGCLDILINNAG  135 (265)
Q Consensus       123 ~~g~ldilinnAg  135 (265)
                      ...+-|.+|...+
T Consensus        68 ~i~~ad~vi~~~~   80 (140)
T 3fwz_A           68 HLECAKWLILTIP   80 (140)
T ss_dssp             TGGGCSEEEECCS
T ss_pred             CcccCCEEEEECC
Confidence            2234566665554

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.36  E-value=0.0016  Score=55.78  Aligned_cols=113  Identities=15%  Similarity=0.127  Sum_probs=69.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-...- .+.+..+.+.|.++....-+-...+.+.+...+                       .    .+++
T Consensus        30 ~Ga~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~-----------------------~----~~~~   81 (258)
T 4gkb_A           30 ERAIPVVFARHAPD-GAFLDALAQRQPRATYLPVELQDDAQCRDAVAQ-----------------------T----IATF   81 (258)
T ss_dssp             TTCEEEEEESSCCC-HHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             cCCEEEEEECCccc-HHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHH-----------------------H----HHHh
Confidence            46677777765543 455666777776665555455555554443322                       2    4678


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                      |++|+||||||+.... +.+.+.++++..++.|.......          .+.++...+++.|   .+||.+...
T Consensus        82 G~iDiLVNnAGi~~~~-~~~~~~e~~~~~~~vNl~g~~~~----------~~~~~p~m~~~~G---~IVnisS~~  142 (258)
T 4gkb_A           82 GRLDGLVNNAGVNDGI-GLDAGRDAFVASLERNLIHYYAM----------AHYCVPHLKATRG---AIVNISSKT  142 (258)
T ss_dssp             SCCCEEEECCCCCCCC-CTTSCHHHHHHHHHHHTHHHHHH----------HHHHHHHHHHHTC---EEEEECCTH
T ss_pred             CCCCEEEECCCCCCCC-CccCCHHHHHHHHHHHhHHHHHH----------HHHHHHHHHhcCC---eEEEEeehh
Confidence            9999999999986544 44677888998888776543322          3333444444444   466666554

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.36  E-value=0.00045  Score=62.17  Aligned_cols=79  Identities=16%  Similarity=0.091  Sum_probs=56.3

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .+.+++++|+|+ +|+|+++++.+...|++|++++|++++++.+.+...      ..+.   .+..+.+++.       +
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~------~~~~---~~~~~~~~~~-------~  226 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG------SRVE---LLYSNSAEIE-------T  226 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGSE---EEECCHHHHH-------H
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC------ceeE---eeeCCHHHHH-------H
Confidence            467799999999 999999999999999999999999877766654321      1111   1222333322       2


Q ss_pred             HhCCccEEEeCCCCCc
Q psy9256         123 QFGCLDILINNAGRSQ  138 (265)
Q Consensus       123 ~~g~ldilinnAg~~~  138 (265)
                      ...+.|++||++|...
T Consensus       227 ~~~~~DvVI~~~~~~~  242 (361)
T 1pjc_A          227 AVAEADLLIGAVLVPG  242 (361)
T ss_dssp             HHHTCSEEEECCCCTT
T ss_pred             HHcCCCEEEECCCcCC
Confidence            2347899999998743

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.34  E-value=0.0015  Score=51.16  Aligned_cols=77  Identities=18%  Similarity=0.278  Sum_probs=53.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ..++.++|.|+ +.+|..+++.|.+.|++|++++|+++..+.+.+        ......+..|.++++.+...      .
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~--------~~g~~~~~~d~~~~~~l~~~------~   81 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS--------EFSGFTVVGDAAEFETLKEC------G   81 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT--------TCCSEEEESCTTSHHHHHTT------T
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh--------cCCCcEEEecCCCHHHHHHc------C
Confidence            35677888886 999999999999999999999998877654321        01234566777775433211      1


Q ss_pred             hCCccEEEeCCC
Q psy9256         124 FGCLDILINNAG  135 (265)
Q Consensus       124 ~g~ldilinnAg  135 (265)
                      ..+.|++|.+.+
T Consensus        82 ~~~ad~Vi~~~~   93 (155)
T 2g1u_A           82 MEKADMVFAFTN   93 (155)
T ss_dssp             GGGCSEEEECSS
T ss_pred             cccCCEEEEEeC
Confidence            345677777776

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.27  E-value=0.00099  Score=50.48  Aligned_cols=75  Identities=21%  Similarity=0.250  Sum_probs=53.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      ++.++|+|+ +.+|..+++.|.+.|++|++++|+++..+.+.+   ..     ....+..|.++++.+..      ....
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~-----~~~~~~~d~~~~~~l~~------~~~~   68 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EI-----DALVINGDCTKIKTLED------AGIE   68 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HC-----SSEEEESCTTSHHHHHH------TTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hc-----CcEEEEcCCCCHHHHHH------cCcc
Confidence            356888887 999999999999999999999997765544332   11     23456778887665432      1245


Q ss_pred             CccEEEeCCC
Q psy9256         126 CLDILINNAG  135 (265)
Q Consensus       126 ~ldilinnAg  135 (265)
                      +.|++|.+.+
T Consensus        69 ~~d~vi~~~~   78 (140)
T 1lss_A           69 DADMYIAVTG   78 (140)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEeeC
Confidence            7888888876

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.18  E-value=0.00077  Score=59.92  Aligned_cols=77  Identities=17%  Similarity=0.266  Sum_probs=54.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|++++|+||++++|.+.+..+...|++|+.+++++++++.+++    .+.  ..    ..|..+ +    +.+.+++..
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa--~~----vi~~~~-~----~~~~~~~~~  214 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGA--DI----VLNHKE-S----LLNQFKTQG  214 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTC--SE----EECTTS-C----HHHHHHHHT
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCC--cE----EEECCc-c----HHHHHHHhC
Confidence            68999999999999999999888899999999988776655443    332  11    233332 2    223333333


Q ss_pred             -CCccEEEeCCCC
Q psy9256         125 -GCLDILINNAGR  136 (265)
Q Consensus       125 -g~ldilinnAg~  136 (265)
                       +..|++++++|.
T Consensus       215 ~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          215 IELVDYVFCTFNT  227 (346)
T ss_dssp             CCCEEEEEESSCH
T ss_pred             CCCccEEEECCCc
Confidence             479999999983

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.14  E-value=0.002  Score=51.73  Aligned_cols=78  Identities=14%  Similarity=0.133  Sum_probs=54.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++.++.++|.|+ +.+|..+++.|.+. |++|++++++++..+.+.+    .     ....+..|.++++.+.++     
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~-----g~~~~~gd~~~~~~l~~~-----  100 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E-----GRNVISGDATDPDFWERI-----  100 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T-----TCCEEECCTTCHHHHHTB-----
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C-----CCCEEEcCCCCHHHHHhc-----
Confidence            466777888885 89999999999999 9999999998766554432    2     234567788887643321     


Q ss_pred             HHhCCccEEEeCCC
Q psy9256         122 QQFGCLDILINNAG  135 (265)
Q Consensus       122 ~~~g~ldilinnAg  135 (265)
                      ....+.|++|...+
T Consensus       101 ~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 LDTGHVKLVLLAMP  114 (183)
T ss_dssp             CSCCCCCEEEECCS
T ss_pred             cCCCCCCEEEEeCC
Confidence            01346777777665

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.13  E-value=0.0011  Score=59.70  Aligned_cols=78  Identities=24%  Similarity=0.298  Sum_probs=53.8

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|++++|+||++|+|...+..+...|++|+.++ ++++.+.+    ++.+.   .   ...|..+.+..+.+    .+ 
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~----~~lGa---~---~v~~~~~~~~~~~~----~~-  245 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV----RKLGA---D---DVIDYKSGSVEEQL----KS-  245 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH----HHTTC---S---EEEETTSSCHHHHH----HT-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH----HHcCC---C---EEEECCchHHHHHH----hh-
Confidence            3689999999999999999988888999998887 44444333    34442   1   12355554433332    22 


Q ss_pred             hCCccEEEeCCCCC
Q psy9256         124 FGCLDILINNAGRS  137 (265)
Q Consensus       124 ~g~ldilinnAg~~  137 (265)
                      .++.|++|+++|..
T Consensus       246 ~~g~D~vid~~g~~  259 (375)
T 2vn8_A          246 LKPFDFILDNVGGS  259 (375)
T ss_dssp             SCCBSEEEESSCTT
T ss_pred             cCCCCEEEECCCCh
Confidence            36799999999954

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.13  E-value=0.00066  Score=61.45  Aligned_cols=79  Identities=14%  Similarity=0.039  Sum_probs=56.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ..+.|++++|+|+ ++||.++++.+...|++|+..+|++++++.+.+.   .+   ...   ..+.++.+++...     
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~---~g---~~~---~~~~~~~~~l~~~-----  228 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAE---FC---GRI---HTRYSSAYELEGA-----  228 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---TT---TSS---EEEECCHHHHHHH-----
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHh---cC---Cee---EeccCCHHHHHHH-----
Confidence            4688999999998 9999999999999999999999987766554432   22   111   2333444443332     


Q ss_pred             HHhCCccEEEeCCCCC
Q psy9256         122 QQFGCLDILINNAGRS  137 (265)
Q Consensus       122 ~~~g~ldilinnAg~~  137 (265)
                        .++.|++|++++..
T Consensus       229 --l~~aDvVi~~~~~p  242 (377)
T 2vhw_A          229 --VKRADLVIGAVLVP  242 (377)
T ss_dssp             --HHHCSEEEECCCCT
T ss_pred             --HcCCCEEEECCCcC
Confidence              23689999999863

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=97.07  E-value=0.00032  Score=60.87  Aligned_cols=50  Identities=14%  Similarity=0.155  Sum_probs=39.4

Q ss_pred             ChHHHHHHHHHHHHHhCCccEEEeCCCCCc--ccccchhhhHHHHHhhhccc
Q psy9256         109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQ--RAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ldilinnAg~~~--~~~~~~~~~~~~~~~~~~~~  158 (265)
                      ++++++++++.+.+.+|++|+||||||+..  ...+.+.+.+.++..+..|.
T Consensus       102 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~  153 (297)
T 1d7o_A          102 SNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASS  153 (297)
T ss_dssp             CCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhh
Confidence            478999999999999999999999999854  44556667777766665544

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.03  E-value=0.0017  Score=58.25  Aligned_cols=76  Identities=22%  Similarity=0.241  Sum_probs=55.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++|+|+ +|+|...+..+...|++|+.+++++++.+.+.+   +.+.   .   ...|..+.+.+       .+..
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~lGa---~---~v~~~~~~~~~-------~~~~  249 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NFGA---D---SFLVSRDQEQM-------QAAA  249 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TSCC---S---EEEETTCHHHH-------HHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCC---c---eEEeccCHHHH-------HHhh
Confidence            6899999996 899999999888899999999998877665442   2331   1   12465554332       2334


Q ss_pred             CCccEEEeCCCCC
Q psy9256         125 GCLDILINNAGRS  137 (265)
Q Consensus       125 g~ldilinnAg~~  137 (265)
                      ++.|++|+++|..
T Consensus       250 ~~~D~vid~~g~~  262 (366)
T 1yqd_A          250 GTLDGIIDTVSAV  262 (366)
T ss_dssp             TCEEEEEECCSSC
T ss_pred             CCCCEEEECCCcH
Confidence            6899999999963

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=97.01  E-value=0.00025  Score=62.30  Aligned_cols=56  Identities=13%  Similarity=0.096  Sum_probs=44.2

Q ss_pred             EeecCCC--------hHHHHHHHHHHHHHhCCccEEEeCCCCCc--ccccchhhhHHHHHhhhccc
Q psy9256         103 LTLDVTQ--------TKYHRRCFDAVIQQFGCLDILINNAGRSQ--RAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       103 ~~~D~~~--------~~~~~~~~~~~~~~~g~ldilinnAg~~~--~~~~~~~~~~~~~~~~~~~~  158 (265)
                      +.+|++|        +++++++++.+.+.+|++|+||||||+..  ...+.+.+.+.++..+..|.
T Consensus        89 ~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~  154 (315)
T 2o2s_A           89 VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSA  154 (315)
T ss_dssp             SCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred             hhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhh
Confidence            4567775        77999999999999999999999999863  45566777777776665554

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.01  E-value=0.00042  Score=54.83  Aligned_cols=43  Identities=16%  Similarity=0.170  Sum_probs=38.0

Q ss_pred             CCceeeeeccccCh--hHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         159 RPSIYTLTLDVTQT--KYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       159 ~~~v~~~~~dv~~~--~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                      +.+...+++|++++  ++++++++.+.+.+|+ |+||||||+...+
T Consensus        67 G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnnAgg~r~~  111 (157)
T 3gxh_A           67 GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHCLANYRAS  111 (157)
T ss_dssp             TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEECSBSHHHH
T ss_pred             CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEECCCCCCHH
Confidence            46788899999999  9999999999999999 9999999975443

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.00  E-value=0.0036  Score=55.78  Aligned_cols=85  Identities=16%  Similarity=0.141  Sum_probs=54.4

Q ss_pred             CC-cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NN-KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~g-k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .| ++++|+||++++|...+......|++|+.+.++.++.++..+.+++.++  ..+    .|..+. ....+.+.+++.
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa--~~v----i~~~~~-~~~~~~~~i~~~  238 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA--TQV----ITEDQN-NSREFGPTIKEW  238 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC--SEE----EEHHHH-HCGGGHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCC--eEE----EecCcc-chHHHHHHHHHH
Confidence            57 9999999999999998887777899999998877664443344455553  111    222210 001122233332


Q ss_pred             ----hCCccEEEeCCCC
Q psy9256         124 ----FGCLDILINNAGR  136 (265)
Q Consensus       124 ----~g~ldilinnAg~  136 (265)
                          -++.|++|+++|.
T Consensus       239 t~~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          239 IKQSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHHHTCCEEEEEESSCH
T ss_pred             hhccCCCceEEEECCCc
Confidence                2479999999983

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.98  E-value=0.00086  Score=59.01  Aligned_cols=76  Identities=18%  Similarity=0.239  Sum_probs=51.1

Q ss_pred             Cc-EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NK-VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk-~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |+ +++|+|+++|+|...+..+...|++|+.+++++++++.+++    .+.  ..    .+|..+.+  ...   +++..
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa--~~----~i~~~~~~--~~~---~~~~~  213 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGA--KE----VLAREDVM--AER---IRPLD  213 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTC--SE----EEECC--------------CC
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCC--cE----EEecCCcH--HHH---HHHhc
Confidence            54 79999999999999998888899999999999888766543    332  11    23544432  111   11212


Q ss_pred             -CCccEEEeCCCC
Q psy9256         125 -GCLDILINNAGR  136 (265)
Q Consensus       125 -g~ldilinnAg~  136 (265)
                       ++.|++|+++|.
T Consensus       214 ~~~~d~vid~~g~  226 (328)
T 1xa0_A          214 KQRWAAAVDPVGG  226 (328)
T ss_dssp             SCCEEEEEECSTT
T ss_pred             CCcccEEEECCcH
Confidence             479999999994

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.96  E-value=0.00017  Score=62.63  Aligned_cols=44  Identities=23%  Similarity=0.310  Sum_probs=38.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERV   86 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~   86 (265)
                      .++.||.++|+|+ +|+|+++++.|++.|+ +|++++|+.++.+++
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            4578999999998 6999999999999999 899999998776544

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=96.96  E-value=0.00022  Score=62.68  Aligned_cols=56  Identities=13%  Similarity=0.083  Sum_probs=44.5

Q ss_pred             EeecCCC--------hHHHHHHHHHHHHHhCCccEEEeCCCCCc--ccccchhhhHHHHHhhhccc
Q psy9256         103 LTLDVTQ--------TKYHRRCFDAVIQQFGCLDILINNAGRSQ--RAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       103 ~~~D~~~--------~~~~~~~~~~~~~~~g~ldilinnAg~~~--~~~~~~~~~~~~~~~~~~~~  158 (265)
                      +.+|++|        +++++++++.+.+.+|++|+||||||+..  ...+.+.+.+.++..+..|.
T Consensus       102 ~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~  167 (319)
T 2ptg_A          102 VPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSS  167 (319)
T ss_dssp             SCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHT
T ss_pred             ccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhh
Confidence            4678887        67899999999999999999999999863  45566777777776665554

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.95  E-value=0.0036  Score=53.78  Aligned_cols=89  Identities=19%  Similarity=0.184  Sum_probs=63.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-...++..+...|.++....-+....+.+.+.+.+                       +    .+++
T Consensus        55 ~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----------------------~----~~~~  107 (276)
T 3r1i_A           55 AGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQ-----------------------M----TGEL  107 (276)
T ss_dssp             TTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH-----------------------H----HHHc
Confidence            356677887777777788888887777766555555555554443332                       2    3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      |++|++|||||+.....+.+.+.++++..+..|...
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g  143 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTG  143 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence            999999999999988888888888888777766543

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.93  E-value=0.0012  Score=57.12  Aligned_cols=76  Identities=20%  Similarity=0.281  Sum_probs=54.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++.||+++|+|+ +|+|+++++.|++.|+ +|++++|+.++.+++.+.+..     .++....  ..+.+         
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-----~~~~~~~--~~~l~---------  178 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-----SRLRISR--YEALE---------  178 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-----TTEEEEC--SGGGT---------
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-----CCeeEee--HHHhc---------
Confidence            4678999999998 6999999999999996 899999988777766655421     1233222  21111         


Q ss_pred             HHHhCCccEEEeCCCCC
Q psy9256         121 IQQFGCLDILINNAGRS  137 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~  137 (265)
                       +  ...|++||.....
T Consensus       179 -~--~~~DivInaTp~g  192 (272)
T 3pwz_A          179 -G--QSFDIVVNATSAS  192 (272)
T ss_dssp             -T--CCCSEEEECSSGG
T ss_pred             -c--cCCCEEEECCCCC
Confidence             1  5689999987653

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.92  E-value=0.004  Score=53.23  Aligned_cols=87  Identities=14%  Similarity=0.265  Sum_probs=62.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...++..+...|.++....-+....+.+.+...+                       +    .+.+|
T Consensus        28 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~~g   80 (264)
T 3tfo_A           28 GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA-----------------------A----VDTWG   80 (264)
T ss_dssp             TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH-----------------------H----HHHHS
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----------------------H----HHHcC
Confidence            56677777665556677778877787876665555555554443322                       2    35679


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      ++|+||||||+.....+.+.+.+.++..+..|..
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~  114 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIK  114 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            9999999999988888888888888877776654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.92  E-value=0.011  Score=50.43  Aligned_cols=90  Identities=20%  Similarity=0.267  Sum_probs=63.0

Q ss_pred             CcEEEEcCCC-CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGAS-SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.+++++.. ..-...++..+...|.++....-+....+.+.+...+.                           .+++
T Consensus        42 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~~~   94 (270)
T 3is3_A           42 GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQA---------------------------VAHF   94 (270)
T ss_dssp             TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH---------------------------HHHH
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH---------------------------HHHc
Confidence            5566666554 34456677777777877766655555555554443322                           3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++++..+..|.....
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~  132 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQF  132 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH
Confidence            99999999999998888888899998888877765433

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.91  E-value=0.016  Score=49.54  Aligned_cols=78  Identities=17%  Similarity=0.150  Sum_probs=54.5

Q ss_pred             hhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCC
Q psy9256          58 IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  137 (265)
Q Consensus        58 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~  137 (265)
                      -..++++.+...|.++....-+....+.+.+...+                       +    .+.+|++|+||||||+.
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~g~id~lvnnAg~~  116 (280)
T 3pgx_A           64 DLDETARLVEDQGRKALTRVLDVRDDAALRELVAD-----------------------G----MEQFGRLDVVVANAGVL  116 (280)
T ss_dssp             HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH-----------------------H----HHHcCCCCEEEECCCCC
Confidence            34556666666777776665555555554443322                       2    35679999999999999


Q ss_pred             cccccchhhhHHHHHhhhcccCCce
Q psy9256         138 QRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      ....+.+.+.++++..+..|.....
T Consensus       117 ~~~~~~~~~~~~~~~~~~~N~~g~~  141 (280)
T 3pgx_A          117 SWGRVWELTDEQWDTVIGVNLTGTW  141 (280)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCcccCCHHHHHHHHhhhhHHHH
Confidence            8888888888988888877765433

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.88  E-value=0.0036  Score=53.67  Aligned_cols=89  Identities=16%  Similarity=0.111  Sum_probs=63.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-....++.+...|.++....-+....+.+.+...+                       +    .+.+
T Consensus        49 ~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~~  101 (271)
T 4ibo_A           49 AGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFAR-----------------------L----DEQG  101 (271)
T ss_dssp             TTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH-----------------------H----HHHT
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH-----------------------H----HHHC
Confidence            366788887766666777778877787776665555555554443322                       2    3568


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      |++|++|||||+.....+.+.+.++++..+..|...
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g  137 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTS  137 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHH
Confidence            999999999999888888888888888777766543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.86  E-value=0.0018  Score=58.11  Aligned_cols=70  Identities=24%  Similarity=0.323  Sum_probs=54.1

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      .++|.|| +++|..+++.|++ ..+|.+++|+.++++++.          .....+.+|++|.+++.++       ..+.
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~----------~~~~~~~~d~~d~~~l~~~-------~~~~   78 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK----------EFATPLKVDASNFDKLVEV-------MKEF   78 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT----------TTSEEEECCTTCHHHHHHH-------HTTC
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh----------ccCCcEEEecCCHHHHHHH-------HhCC
Confidence            4777798 9999999998865 578999999876665543          2355678999998876655       3567


Q ss_pred             cEEEeCCCC
Q psy9256         128 DILINNAGR  136 (265)
Q Consensus       128 dilinnAg~  136 (265)
                      |++||.++-
T Consensus        79 DvVi~~~p~   87 (365)
T 3abi_A           79 ELVIGALPG   87 (365)
T ss_dssp             SEEEECCCG
T ss_pred             CEEEEecCC
Confidence            999999974

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.86  E-value=0.0047  Score=52.42  Aligned_cols=86  Identities=19%  Similarity=0.190  Sum_probs=60.3

Q ss_pred             CcEEEEc-CCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWIT-GASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlIt-Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.++++ +-+..-...+++.+.+.|.++....-+....+.+.+.....                           .+.+
T Consensus        28 G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~~~   80 (258)
T 3oid_A           28 GYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQI---------------------------DETF   80 (258)
T ss_dssp             TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH---------------------------HHHH
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH---------------------------HHHc
Confidence            5566665 55555666777777777877776665655555555443322                           3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      |++|++|||||+.....+.+.+.++++..+..|.
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~  114 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINA  114 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            9999999999998888888888888777776654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.85  E-value=0.0042  Score=53.39  Aligned_cols=88  Identities=17%  Similarity=0.213  Sum_probs=62.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-....+..+...|.++....-+....+.+.+.+.+                       +    .+.+
T Consensus        47 ~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~~   99 (279)
T 3sju_A           47 RGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAA-----------------------A----VERF   99 (279)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----------------------H----HHHc
Confidence            366777777766666677777877787777766565555555444332                       2    3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      |++|++|||||+.....+.+.+.+.++..+..|..
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~  134 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLT  134 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            99999999999988888888888888777666654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.82  E-value=0.0078  Score=49.63  Aligned_cols=73  Identities=14%  Similarity=0.064  Sum_probs=54.2

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      .++|.|+ +.+|..+++.|.+.|.+|++++++++..+++.+.        ....++..|.++++.+...      ...+-
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~--------~~~~~i~gd~~~~~~l~~a------~i~~a   66 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK--------LKATIIHGDGSHKEILRDA------EVSKN   66 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH--------SSSEEEESCTTSHHHHHHH------TCCTT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH--------cCCeEEEcCCCCHHHHHhc------CcccC
Confidence            3788897 8899999999999999999999988766554332        1355788999998766543      23456


Q ss_pred             cEEEeCCC
Q psy9256         128 DILINNAG  135 (265)
Q Consensus       128 dilinnAg  135 (265)
                      |++|...+
T Consensus        67 d~vi~~~~   74 (218)
T 3l4b_C           67 DVVVILTP   74 (218)
T ss_dssp             CEEEECCS
T ss_pred             CEEEEecC
Confidence            66665554

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.82  E-value=0.016  Score=49.20  Aligned_cols=88  Identities=22%  Similarity=0.261  Sum_probs=58.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHH-cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.+++++-+..-....++.+.+ .|.++....-+....+.+.+...                       .+    .+.+
T Consensus        44 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~-----------------------~~----~~~~   96 (266)
T 4egf_A           44 GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELAR-----------------------RA----AEAF   96 (266)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHH-----------------------HH----HHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-----------------------HH----HHHc
Confidence            55677777655555556666655 46666555444333333333222                       12    3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      |++|++|||||+.....+.+.+.+.++..+..|...
T Consensus        97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g  132 (266)
T 4egf_A           97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRA  132 (266)
T ss_dssp             TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHH
Confidence            999999999999888888888888888887777654

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.81  E-value=0.0026  Score=56.23  Aligned_cols=78  Identities=15%  Similarity=0.213  Sum_probs=55.6

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|++++|+|+ +|+|...+..+...|++|+.+++++++.+.++    +.+.   .   ...|..+.+..+.    +.+.
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa---~---~~i~~~~~~~~~~----~~~~  229 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR----RLGA---E---VAVNARDTDPAAW----LQKE  229 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTC---S---EEEETTTSCHHHH----HHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----HcCC---C---EEEeCCCcCHHHH----HHHh
Confidence            36899999997 89999998888889999999999877665443    3442   1   1245555443333    3344


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                      .|+.|++|.++|.
T Consensus       230 ~g~~d~vid~~g~  242 (340)
T 3s2e_A          230 IGGAHGVLVTAVS  242 (340)
T ss_dssp             HSSEEEEEESSCC
T ss_pred             CCCCCEEEEeCCC
Confidence            5789999999883

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.81  E-value=0.0028  Score=54.02  Aligned_cols=84  Identities=17%  Similarity=0.073  Sum_probs=58.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.|++++-...  .+.+..+.+.|.++....-+....+.+.+                  +-+      .        
T Consensus        32 ~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~------------------~~~------~--------   77 (247)
T 4hp8_A           32 AGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKD------------------SFT------D--------   77 (247)
T ss_dssp             TTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTT------------------SST------T--------
T ss_pred             cCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHH------------------HHH------h--------
Confidence            5667888765433  56677778888776555433322211111                  001      1        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++|+..++.|.....
T Consensus        78 g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f  115 (247)
T 4hp8_A           78 AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALF  115 (247)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHH
Confidence            68999999999999999999999999999988886554

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.80  E-value=0.0064  Score=51.94  Aligned_cols=87  Identities=21%  Similarity=0.277  Sum_probs=60.6

Q ss_pred             CcEEEEc-CCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWIT-GASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlIt-Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.++++ .....-...++..+...|.++....-+....+.+.+...+                       +    .+.+
T Consensus        51 G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----------------------~----~~~~  103 (267)
T 3u5t_A           51 GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFAT-----------------------A----EEAF  103 (267)
T ss_dssp             TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH-----------------------H----HHHc
Confidence            5556666 4455566777777777787776665555555554443322                       2    3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      |++|+||||||+.....+.+.+.+.++..+..|..
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~  138 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLK  138 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHH
Confidence            99999999999988888888888888877766654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.79  E-value=0.0054  Score=52.41  Aligned_cols=88  Identities=19%  Similarity=0.286  Sum_probs=61.0

Q ss_pred             CCcEEEEcCC-CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGA-SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++. +..-...++..+...|.++....-+....+.+.+.+.+                       +    .+.
T Consensus        51 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~-----------------------~----~~~  103 (269)
T 4dmm_A           51 AGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAA-----------------------V----IER  103 (269)
T ss_dssp             TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH-----------------------H----HHH
T ss_pred             CCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----------------------H----HHH
Confidence            3556777666 44555667777777777776665555555554443322                       2    356


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +|++|+||||||+.....+.+.+.++++..+..|..
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~  139 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLG  139 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            799999999999988888888888888877776654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.77  E-value=0.00063  Score=60.51  Aligned_cols=77  Identities=23%  Similarity=0.293  Sum_probs=54.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|++++|+|+ +++|...+..+...|+ +|+.+++++++++.++    +.+.   .   ...|..+.+..    +.+.+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~----~~Ga---~---~~~~~~~~~~~----~~v~~~  231 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK----KVGA---D---YVINPFEEDVV----KEVMDI  231 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH----HHTC---S---EEECTTTSCHH----HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCC---C---EEECCCCcCHH----HHHHHH
Confidence            7999999999 9999999998888999 8999998876655443    3332   1   12455544322    333444


Q ss_pred             hC--CccEEEeCCCC
Q psy9256         124 FG--CLDILINNAGR  136 (265)
Q Consensus       124 ~g--~ldilinnAg~  136 (265)
                      .+  ..|++|+++|.
T Consensus       232 ~~g~g~D~vid~~g~  246 (348)
T 2d8a_A          232 TDGNGVDVFLEFSGA  246 (348)
T ss_dssp             TTTSCEEEEEECSCC
T ss_pred             cCCCCCCEEEECCCC
Confidence            42  69999999994

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.76  E-value=0.0036  Score=53.16  Aligned_cols=37  Identities=27%  Similarity=0.440  Sum_probs=30.0

Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      +|++|+||||||+..  ...+.+.++|+..++.|.....
T Consensus        76 ~g~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~  112 (242)
T 4b79_A           76 LPRLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAM  112 (242)
T ss_dssp             CSCCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHH
T ss_pred             cCCCCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHH
Confidence            378999999999865  3567888999999988876554

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.76  E-value=0.0073  Score=51.69  Aligned_cols=88  Identities=20%  Similarity=0.322  Sum_probs=61.5

Q ss_pred             CCcEEEEcCCCC-chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASS-GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++... .-...++..+.+.|.++....-+....+.+.+.+.+                       +    .+.
T Consensus        54 ~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~  106 (271)
T 3v2g_A           54 EGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRE-----------------------T----VEA  106 (271)
T ss_dssp             TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----------------------H----HHH
Confidence            366677765543 455667777777787776665555555555443322                       2    356


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +|++|++|||||+.....+.+.+.++++..+..|..
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  142 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFR  142 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            799999999999988888888888888887776654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.73  E-value=0.006  Score=51.23  Aligned_cols=88  Identities=20%  Similarity=0.265  Sum_probs=60.5

Q ss_pred             CcEEEEcCC-CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGA-SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.++++.. +..-...+++.+...|.++....-+....+.+.+.+.+                       +    .+++
T Consensus        28 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~~   80 (246)
T 3osu_A           28 GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKE-----------------------V----VSQF   80 (246)
T ss_dssp             TCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----------------------H----HHHc
Confidence            555666555 34556677777877787776665555555555443332                       2    3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      |++|++|||||+.....+.+.+.++++..+..|...
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g  116 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKG  116 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence            999999999999888878888888888777666543

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.73  E-value=0.0016  Score=57.67  Aligned_cols=77  Identities=22%  Similarity=0.280  Sum_probs=52.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|++++|+|+ +|+|...+..+...|+ +|+.+++++++++.+++.     .  .    ...|..+.+..+.+ .+..  
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-----a--~----~v~~~~~~~~~~~~-~~~~--  228 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-----A--D----RLVNPLEEDLLEVV-RRVT--  228 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-----C--S----EEECTTTSCHHHHH-HHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-----H--H----hccCcCccCHHHHH-HHhc--
Confidence            7999999999 9999999988888899 899999887665544321     1  1    12455543322222 2222  


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                      .++.|++|+++|.
T Consensus       229 ~~g~D~vid~~g~  241 (343)
T 2dq4_A          229 GSGVEVLLEFSGN  241 (343)
T ss_dssp             SSCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            3469999999984

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.72  E-value=0.009  Score=50.46  Aligned_cols=87  Identities=15%  Similarity=0.153  Sum_probs=64.1

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...++..+...|.++....-+....+.+.+....                       +    .+. |
T Consensus        31 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~-g   82 (252)
T 3h7a_A           31 GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNA-----------------------A----DAH-A   82 (252)
T ss_dssp             TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH-----------------------H----HHH-S
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHH-----------------------H----Hhh-C
Confidence            56678888777777888888888888877766565555555443322                       2    244 8


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      ++|++|||||+.....+.+.+.+.++..+..|...
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g  117 (252)
T 3h7a_A           83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWA  117 (252)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHH
Confidence            99999999999888888888888888877776643

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.71  E-value=0.0036  Score=55.99  Aligned_cols=77  Identities=18%  Similarity=0.223  Sum_probs=53.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|++++|+| ++++|...+..+...|++|+.+++++++++.++    +.+.   .   ...| .+.++.   .+.+.+.
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa---~---~vi~-~~~~~~---~~~v~~~  252 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF----ALGA---D---HGIN-RLEEDW---VERVYAL  252 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HHTC---S---EEEE-TTTSCH---HHHHHHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH----HcCC---C---EEEc-CCcccH---HHHHHHH
Confidence            3689999999 789999999888889999999998877665543    3442   1   1235 332222   2233444


Q ss_pred             h-C-CccEEEeCCC
Q psy9256         124 F-G-CLDILINNAG  135 (265)
Q Consensus       124 ~-g-~ldilinnAg  135 (265)
                      . + +.|++++++|
T Consensus       253 ~~g~g~D~vid~~g  266 (363)
T 3uog_A          253 TGDRGADHILEIAG  266 (363)
T ss_dssp             HTTCCEEEEEEETT
T ss_pred             hCCCCceEEEECCC
Confidence            4 2 6999999999

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.71  E-value=0.0043  Score=55.57  Aligned_cols=80  Identities=15%  Similarity=0.248  Sum_probs=53.8

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh-HHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT-KYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~  121 (265)
                      -.|++++|+|+ +++|...+......|+ +|+.+++++++++.++    +.+.   .   ...|.++. +++...+....
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa---~---~vi~~~~~~~~~~~~~~~~~  259 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGA---T---DFVNPNDHSEPISQVLSKMT  259 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTC---C---EEECGGGCSSCHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HhCC---c---eEEeccccchhHHHHHHHHh
Confidence            36899999996 8999999888888899 7999999888776554    3332   1   12354431 22322222222


Q ss_pred             HHhCCccEEEeCCCC
Q psy9256         122 QQFGCLDILINNAGR  136 (265)
Q Consensus       122 ~~~g~ldilinnAg~  136 (265)
                      .  +..|++|+++|.
T Consensus       260 ~--~g~D~vid~~g~  272 (374)
T 1cdo_A          260 N--GGVDFSLECVGN  272 (374)
T ss_dssp             T--SCBSEEEECSCC
T ss_pred             C--CCCCEEEECCCC
Confidence            2  579999999984

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.71  E-value=0.028  Score=48.66  Aligned_cols=76  Identities=14%  Similarity=0.261  Sum_probs=52.9

Q ss_pred             HHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCcc
Q psy9256          60 EALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  139 (265)
Q Consensus        60 ~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~  139 (265)
                      ...+..+...|.++....-+....+.+.+...+                       +    .+.+|++|+||||||+...
T Consensus        78 ~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~g~iD~lv~nAg~~~~  130 (299)
T 3t7c_A           78 AETVRQVEALGRRIIASQVDVRDFDAMQAAVDD-----------------------G----VTQLGRLDIVLANAALASE  130 (299)
T ss_dssp             HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH-----------------------H----HHHhCCCCEEEECCCCCCC
Confidence            445566666777777766666555555444332                       2    3567999999999999877


Q ss_pred             cc-cchhhhHHHHHhhhcccCCce
Q psy9256         140 AA-WEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       140 ~~-~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      .. +.+.+.++++..+..|.....
T Consensus       131 ~~~~~~~~~~~~~~~~~vN~~g~~  154 (299)
T 3t7c_A          131 GTRLNRMDPKTWRDMIDVNLNGAW  154 (299)
T ss_dssp             CCCTTTCCHHHHHHHHHHHTHHHH
T ss_pred             CCchhhCCHHHHHHHHHHhhHHHH
Confidence            65 778888888888877765433

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.70  E-value=0.005  Score=52.12  Aligned_cols=86  Identities=22%  Similarity=0.275  Sum_probs=58.5

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-....+..+.+.|.++....-+....+.+.+...+                       +    .+++|
T Consensus        30 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~g   82 (257)
T 3imf_A           30 GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQ-----------------------I----DEKFG   82 (257)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHHS
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----------------------H----HHHcC
Confidence            55677776665555666666666676776665555555554443322                       2    35679


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      ++|++|||||+.....+.+.+.+.++..+..|.
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~  115 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVL  115 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            999999999998887888888887777666554

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.68  E-value=0.0045  Score=55.17  Aligned_cols=81  Identities=20%  Similarity=0.226  Sum_probs=57.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|++++|.|+ +++|...+......|++ |+.+++++++++.+++.    .   ..+..+..|-.+.++   +.+.+++.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----~---~~~~~~~~~~~~~~~---~~~~v~~~  247 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI----C---PEVVTHKVERLSAEE---SAKKIVES  247 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH----C---TTCEEEECCSCCHHH---HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----c---hhcccccccccchHH---HHHHHHHH
Confidence            5889999998 99999998888788998 88888887776655442    1   234444455444433   34445555


Q ss_pred             h--CCccEEEeCCCC
Q psy9256         124 F--GCLDILINNAGR  136 (265)
Q Consensus       124 ~--g~ldilinnAg~  136 (265)
                      +  .+.|++++++|.
T Consensus       248 t~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          248 FGGIEPAVALECTGV  262 (363)
T ss_dssp             TSSCCCSEEEECSCC
T ss_pred             hCCCCCCEEEECCCC
Confidence            5  369999999984

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.68  E-value=0.0095  Score=52.21  Aligned_cols=88  Identities=16%  Similarity=0.289  Sum_probs=61.7

Q ss_pred             CCcEEEEcCCC----------CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHH
Q psy9256          45 NNKVVWITGAS----------SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHR  114 (265)
Q Consensus        45 ~gk~vlItGas----------~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~  114 (265)
                      .|-.+++++-+          ..-...++..+...|.++....-+....+.+.+.+.+                      
T Consensus        50 ~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~----------------------  107 (322)
T 3qlj_A           50 EGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQT----------------------  107 (322)
T ss_dssp             TTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHH----------------------
T ss_pred             CCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH----------------------
Confidence            36677777654          3445667777877888877776666555555544332                      


Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         115 RCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       115 ~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                       +    .+.+|++|+||||||+.....+.+.+.++++..+..|..
T Consensus       108 -~----~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~  147 (322)
T 3qlj_A          108 -A----VETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLK  147 (322)
T ss_dssp             -H----HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHH
T ss_pred             -H----HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence             2    356799999999999988887888888887777666653

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.67  E-value=0.0067  Score=51.36  Aligned_cols=86  Identities=21%  Similarity=0.268  Sum_probs=58.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-..+++..+.+.|.++....-+....+.+.+...+                       +    .+++|
T Consensus        36 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~~g   88 (256)
T 3gaf_A           36 GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKA-----------------------A----LDQFG   88 (256)
T ss_dssp             TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHHS
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----------------------H----HHHcC
Confidence            55677777766666677777877787777665555555554443322                       2    35679


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      ++|++|||||+.....+ +.+.++++..+..|..
T Consensus        89 ~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~  121 (256)
T 3gaf_A           89 KITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLF  121 (256)
T ss_dssp             CCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTH
T ss_pred             CCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhH
Confidence            99999999999877665 6667777766655543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.66  E-value=0.0053  Score=52.58  Aligned_cols=87  Identities=17%  Similarity=0.222  Sum_probs=58.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...++..+.+.|.++....-+....+.+.+...+                       +    .+.+|
T Consensus        52 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~~g  104 (270)
T 3ftp_A           52 GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVES-----------------------T----LKEFG  104 (270)
T ss_dssp             TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH-----------------------H----HHHHS
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHH-----------------------H----HHHcC
Confidence            56677777666556667777777676655444444444444443322                       2    35679


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      ++|++|||||+.....+.+.+.++++..+..|..
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  138 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLK  138 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence            9999999999988887788888888877766654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.66  E-value=0.0064  Score=51.67  Aligned_cols=86  Identities=21%  Similarity=0.278  Sum_probs=57.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.+++++-+..-....+..+.+.| .++....-+-...+.+.+...+                       +    .+++
T Consensus        34 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~   86 (262)
T 3pk0_A           34 GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR-----------------------A----VEEF   86 (262)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH-----------------------H----HHHh
Confidence            5567777766555566777776665 4665555455454444443322                       2    3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      |++|++|||||+.....+.+.+.+.++..+..|.
T Consensus        87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~  120 (262)
T 3pk0_A           87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNV  120 (262)
T ss_dssp             SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhh
Confidence            9999999999998888888888888777766554

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.65  E-value=0.018  Score=51.31  Aligned_cols=52  Identities=25%  Similarity=0.282  Sum_probs=40.5

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCV   91 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~   91 (265)
                      ++..|+++.+.|+|+++.+|..+|..++..|  ..|++.++++++++.....+.
T Consensus         2 ~~~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~   55 (343)
T 3fi9_A            2 SLSYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIR   55 (343)
T ss_dssp             CCCCSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhh
Confidence            4556778889999999999999999999988  479999987765554433333

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.65  E-value=0.035  Score=47.47  Aligned_cols=76  Identities=17%  Similarity=0.190  Sum_probs=51.7

Q ss_pred             HHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCcc
Q psy9256          60 EALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  139 (265)
Q Consensus        60 ~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~  139 (265)
                      .+++..+...|.++....-+....+.+.+...+                       +    .+.+|++|+||||||+...
T Consensus        65 ~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~g~id~lv~nAg~~~~  117 (286)
T 3uve_A           65 AETADLVKGHNRRIVTAEVDVRDYDALKAAVDS-----------------------G----VEQLGRLDIIVANAGIGNG  117 (286)
T ss_dssp             HHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHH-----------------------H----HHHhCCCCEEEECCcccCC
Confidence            445555556677777665565555555444332                       2    3567999999999999877


Q ss_pred             cc-cchhhhHHHHHhhhcccCCce
Q psy9256         140 AA-WEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       140 ~~-~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      .. +.+.+.++++..+..|.....
T Consensus       118 ~~~~~~~~~~~~~~~~~~N~~g~~  141 (286)
T 3uve_A          118 GDTLDKTSEEDWTEMIDINLAGVW  141 (286)
T ss_dssp             CSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCccccCCHHHHHHHHHHhhHHHH
Confidence            65 777888888888877765433

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=96.64  E-value=0.0047  Score=54.70  Aligned_cols=33  Identities=24%  Similarity=0.210  Sum_probs=29.3

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCC-------eEEEEecC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGA-------KLVLSARS   79 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~-------~V~~~~r~   79 (265)
                      +.++||||++.+|..++..|+..|.       .|++.+++
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~   45 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP   45 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence            4699999999999999999998885       78888876

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.64  E-value=0.033  Score=48.64  Aligned_cols=75  Identities=13%  Similarity=0.267  Sum_probs=52.5

Q ss_pred             HHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCcc
Q psy9256          60 EALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  139 (265)
Q Consensus        60 ~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~  139 (265)
                      ...+..+...|.++....-+....+.+.+.+.+                       +    .+.+|++|+||||||+...
T Consensus        96 ~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~~g~iD~lVnnAg~~~~  148 (317)
T 3oec_A           96 KETVRLVEEQGRRIIARQADVRDLASLQAVVDE-----------------------A----LAEFGHIDILVSNVGISNQ  148 (317)
T ss_dssp             HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----------------------H----HHHcCCCCEEEECCCCCCC
Confidence            344555566677777665555555555443332                       2    3567999999999999988


Q ss_pred             cccchhhhHHHHHhhhcccCCc
Q psy9256         140 AAWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~  161 (265)
                      ..+.+.+.++++..+..|....
T Consensus       149 ~~~~~~~~~~~~~~~~vN~~g~  170 (317)
T 3oec_A          149 GEVVSLTDQQWSDILQTNLIGA  170 (317)
T ss_dssp             BCTTTCCHHHHHHHHHHHTHHH
T ss_pred             CCcccCCHHHHHHHHHHhhHHH
Confidence            8888888888888887776543

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.63  E-value=0.0038  Score=55.47  Aligned_cols=81  Identities=27%  Similarity=0.314  Sum_probs=53.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCC-hHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ-TKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~  123 (265)
                      .|++++|+|+ +|+|...+..+...|++|+.+++++++++.++    +.+.   .   ...|.++ .+..+++.+.....
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa---~---~~~~~~~~~~~~~~i~~~~~~~  236 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGA---D---VTLVVDPAKEEESSIIERIRSA  236 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTC---S---EEEECCTTTSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH----HhCC---C---EEEcCcccccHHHHHHHHhccc
Confidence            5899999997 89999999888888999999988876665443    3442   1   1235443 33333332211100


Q ss_pred             -hCCccEEEeCCCC
Q psy9256         124 -FGCLDILINNAGR  136 (265)
Q Consensus       124 -~g~ldilinnAg~  136 (265)
                       -++.|++|+++|.
T Consensus       237 ~g~g~D~vid~~g~  250 (352)
T 1e3j_A          237 IGDLPNVTIDCSGN  250 (352)
T ss_dssp             SSSCCSEEEECSCC
T ss_pred             cCCCCCEEEECCCC
Confidence             1469999999984

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.61  E-value=0.0085  Score=51.23  Aligned_cols=75  Identities=20%  Similarity=0.369  Sum_probs=52.8

Q ss_pred             hHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCc
Q psy9256          59 GEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  138 (265)
Q Consensus        59 G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~  138 (265)
                      ....++.+...|.++....-+....+.+.+...+                       +    .+++|++|+||||||+..
T Consensus        61 ~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----------------------~----~~~~g~id~lvnnAg~~~  113 (277)
T 3tsc_A           61 LSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDD-----------------------G----VAALGRLDIIVANAGVAA  113 (277)
T ss_dssp             HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----------------------H----HHHcCCCCEEEECCCCCC
Confidence            3445556666677777665565555555544332                       2    356799999999999998


Q ss_pred             ccccchhhhHHHHHhhhcccCC
Q psy9256         139 RAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      ...+.+.+.++++..+..|...
T Consensus       114 ~~~~~~~~~~~~~~~~~vN~~g  135 (277)
T 3tsc_A          114 PQAWDDITPEDFRDVMDINVTG  135 (277)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHH
T ss_pred             CCChhhCCHHHHHHHHHHhHHH
Confidence            8888888888888887777643

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.61  E-value=0.0076  Score=51.24  Aligned_cols=87  Identities=24%  Similarity=0.203  Sum_probs=59.1

Q ss_pred             CCcEEEEcCCC---CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          45 NNKVVWITGAS---SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        45 ~gk~vlItGas---~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .|-.+++++-+   ..-...++..+...|.++....-+....+.+.+...+.                           .
T Consensus        34 ~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~---------------------------~   86 (262)
T 3ksu_A           34 ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA---------------------------E   86 (262)
T ss_dssp             SSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH---------------------------H
T ss_pred             CCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH---------------------------H
Confidence            35566665432   22345566677677888877766666655555443322                           3


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      +.+|++|+||||||+.....+.+.+.++++..+..|.
T Consensus        87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~  123 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINN  123 (262)
T ss_dssp             HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            5679999999999998888888888888887776654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.61  E-value=0.0083  Score=52.12  Aligned_cols=87  Identities=13%  Similarity=0.101  Sum_probs=62.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...++..+...|.++....-+....+.+.+.+.+                       +    .+.+|
T Consensus        55 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~~g  107 (301)
T 3tjr_A           55 GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADE-----------------------A----FRLLG  107 (301)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHHS
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH-----------------------H----HHhCC
Confidence            56677777766666677777877787776665565555555443332                       1    35579


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      ++|++|||||+...+.+.+.+.+.++..+..|..
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  141 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLW  141 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhH
Confidence            9999999999998888888888887777766654

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.60  E-value=0.0023  Score=57.09  Aligned_cols=74  Identities=24%  Similarity=0.323  Sum_probs=53.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh-HHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT-KYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~  123 (265)
                      .|++++|+|+ +++|...+..+...|++|+.+++++++++.+++    .+.  ..    ..|..+. +..+.+    .  
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lGa--~~----v~~~~~~~~~~~~~----~--  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGA--DH----YIATLEEGDWGEKY----F--  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTC--SE----EEEGGGTSCHHHHS----C--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCC--CE----EEcCcCchHHHHHh----h--
Confidence            5899999999 999999988888889999999999888766543    332  11    2344443 222221    1  


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                       ++.|++|+++|.
T Consensus       242 -~~~D~vid~~g~  253 (360)
T 1piw_A          242 -DTFDLIVVCASS  253 (360)
T ss_dssp             -SCEEEEEECCSC
T ss_pred             -cCCCEEEECCCC
Confidence             689999999986

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.59  E-value=0.0043  Score=54.79  Aligned_cols=72  Identities=15%  Similarity=0.064  Sum_probs=53.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      .+.++|.|+ +.+|..+++.|.++|. |++++++++..+ +.+         ....++..|.+|++.+.+.      ...
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~---------~~~~~i~gd~~~~~~L~~a------~i~  176 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR---------SGANFVHGDPTRVSDLEKA------NVR  176 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH---------TTCEEEESCTTSHHHHHHT------CST
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh---------CCcEEEEeCCCCHHHHHhc------Chh
Confidence            457889997 8899999999999999 999999887765 332         2467899999998876644      234


Q ss_pred             CccEEEeCCC
Q psy9256         126 CLDILINNAG  135 (265)
Q Consensus       126 ~ldilinnAg  135 (265)
                      +-|.+|...+
T Consensus       177 ~a~~vi~~~~  186 (336)
T 1lnq_A          177 GARAVIVDLE  186 (336)
T ss_dssp             TEEEEEECCS
T ss_pred             hccEEEEcCC
Confidence            5566665543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.57  E-value=0.0089  Score=50.23  Aligned_cols=87  Identities=23%  Similarity=0.223  Sum_probs=55.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...++..+...|.++....-+....+.+.+...                       .+    .+.+|
T Consensus        31 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~-----------------------~~----~~~~g   83 (247)
T 2jah_A           31 GAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVA-----------------------ST----VEALG   83 (247)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH-----------------------HH----HHHHS
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH-----------------------HH----HHHcC
Confidence            5566666655444455666666667676655545544444443332                       22    34579


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      ++|++|||||+.....+.+.+.++++..+..|..
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~  117 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLL  117 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhH
Confidence            9999999999987777777777777766665553

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.57  E-value=0.015  Score=49.68  Aligned_cols=86  Identities=23%  Similarity=0.238  Sum_probs=59.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++ ...-....+..+...|.++....-+....+.+.+.                        .+..    +.+
T Consensus        54 ~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~------------------------~~~~----~~~  104 (273)
T 3uf0_A           54 AGAHVLAWG-RTDGVKEVADEIADGGGSAEAVVADLADLEGAANV------------------------AEEL----AAT  104 (273)
T ss_dssp             TTCEEEEEE-SSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHH------------------------HHHH----HHH
T ss_pred             CCCEEEEEc-CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH------------------------HHHH----Hhc
Confidence            356677777 44445667777777787776665555554444332                        1111    335


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      |++|++|||||+.....+.+.+.++++..+..|..
T Consensus       105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~  139 (273)
T 3uf0_A          105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLD  139 (273)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhH
Confidence            89999999999998888888888888877776654

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.57  E-value=0.0094  Score=53.04  Aligned_cols=76  Identities=16%  Similarity=0.278  Sum_probs=51.5

Q ss_pred             cCCcEEEEcCCCCchhHHH-HHHH-HHcCCe-EEEEecCCC---cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEAL-ALQL-SKCGAK-LVLSARSSS---NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        44 l~gk~vlItGas~GIG~ai-a~~l-~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      +.+++++|+|+ +++|... +... ...|++ |+.++++++   +++.++    +.+     +..+  |..+.+..+  +
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~----~lG-----a~~v--~~~~~~~~~--i  236 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE----ELD-----ATYV--DSRQTPVED--V  236 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH----HTT-----CEEE--ETTTSCGGG--H
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH----HcC-----Cccc--CCCccCHHH--H
Confidence            33489999999 9999998 7666 567998 999999887   665443    333     2222  555433222  2


Q ss_pred             HHHHHHhCCccEEEeCCCC
Q psy9256         118 DAVIQQFGCLDILINNAGR  136 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~  136 (265)
                      .+.   .|+.|++|+++|.
T Consensus       237 ~~~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          237 PDV---YEQMDFIYEATGF  252 (357)
T ss_dssp             HHH---SCCEEEEEECSCC
T ss_pred             HHh---CCCCCEEEECCCC
Confidence            222   3479999999984

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.55  E-value=0.0095  Score=51.70  Aligned_cols=88  Identities=17%  Similarity=0.211  Sum_probs=60.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++-+..-...++..+.+.| .++....-+-...+.+.+....                       +    .+.
T Consensus        64 ~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~  116 (293)
T 3rih_A           64 AGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART-----------------------V----VDA  116 (293)
T ss_dssp             TTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHH-----------------------H----HHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH-----------------------H----HHH
Confidence            35667777777666677777777766 4565555455555544443322                       2    356


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +|++|+||||||+.....+.+.+.++++..+..|..
T Consensus       117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  152 (293)
T 3rih_A          117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVK  152 (293)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            799999999999988888888888877776665543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.54  E-value=0.035  Score=47.45  Aligned_cols=87  Identities=22%  Similarity=0.253  Sum_probs=56.6

Q ss_pred             CcEEEEcCCCCc-hhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSG-IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.+++++-+.. ....++..+.+.|.++....-+....+.+.+...                       .+    .+.+
T Consensus        53 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----------------------~~----~~~~  105 (283)
T 1g0o_A           53 GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE-----------------------EA----VKIF  105 (283)
T ss_dssp             TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH-----------------------HH----HHHH
T ss_pred             CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHH-----------------------HH----HHHc
Confidence            556666665542 3345566666667776665555544444443322                       22    2457


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      |++|++|||||+.....+.+.+.++++..+..|..
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  140 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTR  140 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhH
Confidence            99999999999987777777888888877766664

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.54  E-value=0.0056  Score=55.06  Aligned_cols=78  Identities=21%  Similarity=0.278  Sum_probs=53.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCC--ChHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT--QTKYHRRCFDAVI  121 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~  121 (265)
                      .|++++|+| ++|+|...+..+...| ++|+.+++++++++.++    +.+.  ..    ..|..  +.+   .+.+.+.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~----~lGa--~~----vi~~~~~~~~---~~~~~v~  260 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----EIGA--DL----TLNRRETSVE---ERRKAIM  260 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----HTTC--SE----EEETTTSCHH---HHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH----HcCC--cE----EEeccccCcc---hHHHHHH
Confidence            589999999 8999999988888889 59999998876665443    3442  11    13433  122   2334445


Q ss_pred             HHhC--CccEEEeCCCC
Q psy9256         122 QQFG--CLDILINNAGR  136 (265)
Q Consensus       122 ~~~g--~ldilinnAg~  136 (265)
                      +..+  ..|++|+++|.
T Consensus       261 ~~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          261 DITHGRGADFILEATGD  277 (380)
T ss_dssp             HHTTTSCEEEEEECSSC
T ss_pred             HHhCCCCCcEEEECCCC
Confidence            5543  69999999984

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.53  E-value=0.0085  Score=54.84  Aligned_cols=73  Identities=19%  Similarity=0.249  Sum_probs=55.5

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      ..++|.|+ +-+|..+++.|.+.|..|++++++++..+.+.+    .     ...++..|.++++.+.++      ...+
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~-----g~~vi~GDat~~~~L~~a------gi~~   68 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F-----GMKVFYGDATRMDLLESA------GAAK   68 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T-----TCCCEESCTTCHHHHHHT------TTTT
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C-----CCeEEEcCCCCHHHHHhc------CCCc
Confidence            45888897 679999999999999999999999877765543    2     345688999998876554      3345


Q ss_pred             ccEEEeCCC
Q psy9256         127 LDILINNAG  135 (265)
Q Consensus       127 ldilinnAg  135 (265)
                      -|++|...+
T Consensus        69 A~~viv~~~   77 (413)
T 3l9w_A           69 AEVLINAID   77 (413)
T ss_dssp             CSEEEECCS
T ss_pred             cCEEEECCC
Confidence            666666554

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.53  E-value=0.054  Score=45.64  Aligned_cols=87  Identities=22%  Similarity=0.207  Sum_probs=58.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.+++++-...-.......+.+.+ .++....-+....+.+.+.+.+                       +    .+.+
T Consensus        47 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----------------------~----~~~~   99 (266)
T 3o38_A           47 GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ-----------------------T----VEKA   99 (266)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH-----------------------H----HHHh
Confidence            5567777665555556666665543 4565555555555544443322                       2    3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      |++|++|||||+.....+.+.+.++++..+..|..
T Consensus       100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  134 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLT  134 (266)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhH
Confidence            99999999999988888888888888877776654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.52  E-value=0.016  Score=48.94  Aligned_cols=40  Identities=23%  Similarity=0.312  Sum_probs=33.4

Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      .+.+|++|++|||||+.....+.+.+.++++..+..|...
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g  116 (255)
T 4eso_A           77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKG  116 (255)
T ss_dssp             HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHH
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence            3567999999999999888888888888888888777643

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.52  E-value=0.0085  Score=53.70  Aligned_cols=78  Identities=14%  Similarity=0.127  Sum_probs=54.6

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|++++|.||++++|...+......|++|+.+. ++++++.+    ++++.   .   ...|..+.+..    +.+++.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~----~~lGa---~---~vi~~~~~~~~----~~v~~~  227 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLA----KSRGA---E---EVFDYRAPNLA----QTIRTY  227 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH----HHTTC---S---EEEETTSTTHH----HHHHHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHH----HHcCC---c---EEEECCCchHH----HHHHHH
Confidence            4689999999999999999888888999998876 55555433    34442   1   22455554432    334444


Q ss_pred             h-CCccEEEeCCCC
Q psy9256         124 F-GCLDILINNAGR  136 (265)
Q Consensus       124 ~-g~ldilinnAg~  136 (265)
                      . |+.|+++.++|.
T Consensus       228 t~g~~d~v~d~~g~  241 (371)
T 3gqv_A          228 TKNNLRYALDCITN  241 (371)
T ss_dssp             TTTCCCEEEESSCS
T ss_pred             ccCCccEEEECCCc
Confidence            4 569999999994

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.52  E-value=0.0041  Score=55.71  Aligned_cols=78  Identities=17%  Similarity=0.299  Sum_probs=53.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh-HHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT-KYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~  122 (265)
                      .|++++|+|+ +++|...+......|+ +|+.+++++++++.++    +.+.   .   ...|..+. +++.+   .+.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa---~---~vi~~~~~~~~~~~---~~~~  256 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK----EVGA---T---ECVNPQDYKKPIQE---VLTE  256 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTC---S---EEECGGGCSSCHHH---HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HhCC---c---eEecccccchhHHH---HHHH
Confidence            6899999995 8999999888888899 7999999888776543    3332   1   12344431 22222   2233


Q ss_pred             Hh-CCccEEEeCCCC
Q psy9256         123 QF-GCLDILINNAGR  136 (265)
Q Consensus       123 ~~-g~ldilinnAg~  136 (265)
                      .. +..|++|+++|.
T Consensus       257 ~~~~g~D~vid~~g~  271 (374)
T 2jhf_A          257 MSNGGVDFSFEVIGR  271 (374)
T ss_dssp             HTTSCBSEEEECSCC
T ss_pred             HhCCCCcEEEECCCC
Confidence            23 479999999984

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.52  E-value=0.011  Score=49.50  Aligned_cols=87  Identities=18%  Similarity=0.164  Sum_probs=61.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...+...+.+.|.++....-+....+.+.+...+.                           .+.+|
T Consensus        29 G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---------------------------~~~~~   81 (247)
T 3lyl_A           29 GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEI---------------------------KAENL   81 (247)
T ss_dssp             TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------------------------HHTTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH---------------------------HHHcC
Confidence            556777777766667777888777877766655555555544433221                           34578


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      ++|++|||||+.....+.+.+.++++..+..|..
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  115 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLS  115 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhH
Confidence            9999999999988887777777777766665543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.52  E-value=0.011  Score=50.13  Aligned_cols=87  Identities=17%  Similarity=0.242  Sum_probs=60.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...++..+...|.++....-+....+.+.+...+.                           .+++|
T Consensus        35 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~~~g   87 (264)
T 3ucx_A           35 GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDET---------------------------MKAYG   87 (264)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------------------------HHHTS
T ss_pred             cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH---------------------------HHHcC
Confidence            556777776666667777888777877776655655555554443322                           35679


Q ss_pred             CccEEEeCCCCC-cccccchhhhHHHHHhhhcccC
Q psy9256         126 CLDILINNAGRS-QRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       126 ~ldilinnAg~~-~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      ++|++|||||+. ....+.+.+.++++..+..|..
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~  122 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVF  122 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhH
Confidence            999999999995 5556777778888777766654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.52  E-value=0.013  Score=50.37  Aligned_cols=87  Identities=18%  Similarity=0.201  Sum_probs=60.6

Q ss_pred             CcEEEEcCCCCc-------hhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          46 NKVVWITGASSG-------IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        46 gk~vlItGas~G-------IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      |-.+++++-+..       --.+.+..+...|.++....-+-...+.+.+...+.                         
T Consensus        33 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-------------------------   87 (285)
T 3sc4_A           33 GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT-------------------------   87 (285)
T ss_dssp             TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH-------------------------
T ss_pred             CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH-------------------------
Confidence            556777765543       345667777777888777765655555554443322                         


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                        .+.+|++|+||||||+.....+.+.+.+.++..+..|..
T Consensus        88 --~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  126 (285)
T 3sc4_A           88 --VEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVR  126 (285)
T ss_dssp             --HHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHH
T ss_pred             --HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence              356799999999999988888888888888877666553

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.51  E-value=0.0082  Score=51.71  Aligned_cols=89  Identities=21%  Similarity=0.230  Sum_probs=61.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-...++..+...|.++....-+....+.+.+...+                       +    .+.+
T Consensus        51 ~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~~  103 (283)
T 3v8b_A           51 DGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRD-----------------------L----VLKF  103 (283)
T ss_dssp             TTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----------------------H----HHHh
Confidence            366777877666556667777766777776665555555554443322                       2    3567


Q ss_pred             CCccEEEeCCCCCcc-cccchhhhHHHHHhhhcccCC
Q psy9256         125 GCLDILINNAGRSQR-AAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       125 g~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      |++|++|||||+... ..+.+.+.++++..+..|...
T Consensus       104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g  140 (283)
T 3v8b_A          104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRG  140 (283)
T ss_dssp             SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHH
T ss_pred             CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHH
Confidence            999999999999754 567778888888877776643

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.50  E-value=0.026  Score=47.38  Aligned_cols=86  Identities=26%  Similarity=0.317  Sum_probs=55.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-....+..+   |.++....-+....+.+.+...                       .+    .+.+|
T Consensus        30 G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~-----------------------~~----~~~~g   79 (247)
T 3rwb_A           30 GATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFA-----------------------EI----QALTG   79 (247)
T ss_dssp             TCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHH-----------------------HH----HHHHS
T ss_pred             CCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHH-----------------------HH----HHHCC
Confidence            556777765543333444433   5555554444444444443322                       22    35679


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (265)
                      ++|++|||||+.....+.+.+.++++..+..|....
T Consensus        80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~  115 (247)
T 3rwb_A           80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGT  115 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHH
Confidence            999999999999888888888888888887776543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.47  E-value=0.03  Score=48.32  Aligned_cols=89  Identities=21%  Similarity=0.226  Sum_probs=58.0

Q ss_pred             CCcEEEEcCCCCc-hhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSG-IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++-... ........+...|.++....-+....+.+.+.+.+                       +    .++
T Consensus        70 ~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~  122 (291)
T 3ijr_A           70 EGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQE-----------------------T----VRQ  122 (291)
T ss_dssp             TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHH-----------------------H----HHH
T ss_pred             CCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----------------------H----HHH
Confidence            3556777766553 34445555556677777665555555555444332                       2    356


Q ss_pred             hCCccEEEeCCCCCcc-cccchhhhHHHHHhhhcccCC
Q psy9256         124 FGCLDILINNAGRSQR-AAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       124 ~g~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      +|++|++|||||+... ..+.+.+.++++..+..|...
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g  160 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFS  160 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHH
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHH
Confidence            7999999999999754 466777888888887776643

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.47  E-value=0.0081  Score=54.73  Aligned_cols=43  Identities=21%  Similarity=0.072  Sum_probs=38.3

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV   86 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~   86 (265)
                      .+.|++++|+|+ +++|+..++.+...|++|++.+++++.++.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            578999999997 8899999999999999999999998877654

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.46  E-value=0.013  Score=49.07  Aligned_cols=86  Identities=21%  Similarity=0.269  Sum_probs=54.1

Q ss_pred             CcEEEEcCC-CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGA-SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.+++++- +..-...++..+...|.++....-+....+.+.+...                       .+    .+.+
T Consensus        28 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----------------------~~----~~~~   80 (246)
T 2uvd_A           28 GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVK-----------------------QT----VDVF   80 (246)
T ss_dssp             TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH-----------------------HH----HHHH
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH-----------------------HH----HHHc
Confidence            555666655 4444455666666667666555444444444443322                       22    3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      |++|++|||||+.....+.+.+.++++..+..|.
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  114 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNL  114 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            9999999999998777777777777776665554

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.45  E-value=0.019  Score=49.05  Aligned_cols=87  Identities=18%  Similarity=0.146  Sum_probs=59.7

Q ss_pred             CcEEEEcCCCCc-------hhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          46 NKVVWITGASSG-------IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        46 gk~vlItGas~G-------IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      |-.+++++-+..       --...+..+...|.++....-+....+.+.+...+.                         
T Consensus        30 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-------------------------   84 (274)
T 3e03_A           30 GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT-------------------------   84 (274)
T ss_dssp             TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH-------------------------
T ss_pred             CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH-------------------------
Confidence            556777665432       235566777777888777766665555554443322                         


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                        .+.+|++|++|||||+.....+.+.+.+.++..+..|..
T Consensus        85 --~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~  123 (274)
T 3e03_A           85 --VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNAR  123 (274)
T ss_dssp             --HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHH
T ss_pred             --HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhH
Confidence              356799999999999988888888888888877766653

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.44  E-value=0.019  Score=47.85  Aligned_cols=39  Identities=13%  Similarity=0.081  Sum_probs=27.4

Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      +.+|++|++|||||+.....+.+.+.++++..+..|...
T Consensus        73 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g  111 (235)
T 3l6e_A           73 EWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVS  111 (235)
T ss_dssp             HHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHH
T ss_pred             HhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHH
Confidence            467999999999999887777888888888887776643

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.41  E-value=0.015  Score=49.04  Aligned_cols=86  Identities=20%  Similarity=0.295  Sum_probs=52.8

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...++..+...|.++....-+....+.+.+...                       .+    .+.+|
T Consensus        26 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~-----------------------~~----~~~~g   78 (256)
T 1geg_A           26 GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVE-----------------------QA----RKTLG   78 (256)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH-----------------------HH----HHHTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-----------------------HH----HHHhC
Confidence            5556666554444455666666666666555444444444443322                       22    35679


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      ++|++|||||+.....+.+.+.++++..+..|.
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  111 (256)
T 1geg_A           79 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINV  111 (256)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            999999999998777777777776665555443

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.40  E-value=0.016  Score=49.21  Aligned_cols=84  Identities=15%  Similarity=0.226  Sum_probs=58.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCC-------------------CcHHHHHHHHHHhCCCCCcEE
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSS-------------------SNLERVKNLCVQAGAHPQSIY  101 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~  101 (265)
                      ..+.++.++|.|+ +|+|..+++.|++.|. ++.+++++.                   ++.+.+.+.+.+... ..++.
T Consensus        27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~  104 (249)
T 1jw9_B           27 EALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP-HIAIT  104 (249)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEE
T ss_pred             HHHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC-CcEEE
Confidence            3466788999997 7999999999999997 799999887                   667777776666531 23444


Q ss_pred             EEeecCCChHHHHHHHHHHHHHhCCccEEEeCCC
Q psy9256         102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAG  135 (265)
Q Consensus       102 ~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg  135 (265)
                      .+..++++ +...       +...+.|++|++.+
T Consensus       105 ~~~~~~~~-~~~~-------~~~~~~DvVi~~~d  130 (249)
T 1jw9_B          105 PVNALLDD-AELA-------ALIAEHDLVLDCTD  130 (249)
T ss_dssp             EECSCCCH-HHHH-------HHHHTSSEEEECCS
T ss_pred             EEeccCCH-hHHH-------HHHhCCCEEEEeCC
Confidence            55555542 2222       22346788887765

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.39  E-value=0.0061  Score=54.68  Aligned_cols=74  Identities=20%  Similarity=0.251  Sum_probs=54.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|.+++|+|+ +++|...+......|++|+.+++++++++.+++    .+.   .   ...|..+.+.++++       .
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa---~---~vi~~~~~~~~~~~-------~  255 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGA---D---EVVNSRNADEMAAH-------L  255 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTC---S---EEEETTCHHHHHTT-------T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---c---EEeccccHHHHHHh-------h
Confidence            5899999998 789999988887889999999998888765543    332   1   12455554432222       2


Q ss_pred             CCccEEEeCCCC
Q psy9256         125 GCLDILINNAGR  136 (265)
Q Consensus       125 g~ldilinnAg~  136 (265)
                      ++.|++|+++|.
T Consensus       256 ~g~Dvvid~~g~  267 (369)
T 1uuf_A          256 KSFDFILNTVAA  267 (369)
T ss_dssp             TCEEEEEECCSS
T ss_pred             cCCCEEEECCCC
Confidence            689999999995

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.39  E-value=0.0066  Score=54.40  Aligned_cols=78  Identities=17%  Similarity=0.243  Sum_probs=52.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh-HHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT-KYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~  122 (265)
                      .|++++|+|+ +++|...+......|+ +|+.+++++++++.++    +.+.   .   ...|.++. ++....   +.+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa---~---~vi~~~~~~~~~~~~---v~~  260 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK----ALGA---T---DCLNPRELDKPVQDV---ITE  260 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTC---S---EEECGGGCSSCHHHH---HHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HhCC---c---EEEccccccchHHHH---HHH
Confidence            6889999996 8999999888878899 7999999888776543    3332   1   12344431 122222   222


Q ss_pred             Hh-CCccEEEeCCCC
Q psy9256         123 QF-GCLDILINNAGR  136 (265)
Q Consensus       123 ~~-g~ldilinnAg~  136 (265)
                      .. +..|++|+++|.
T Consensus       261 ~~~~g~Dvvid~~G~  275 (376)
T 1e3i_A          261 LTAGGVDYSLDCAGT  275 (376)
T ss_dssp             HHTSCBSEEEESSCC
T ss_pred             HhCCCccEEEECCCC
Confidence            22 579999999984

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.39  E-value=0.0046  Score=56.34  Aligned_cols=74  Identities=15%  Similarity=0.276  Sum_probs=52.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++.|++++|.|+ |++|..+++.+...|+ +|++++|++++.+++.+.   .+.   .  .  .+.   +++...     
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~---~g~---~--~--~~~---~~l~~~-----  224 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD---LGG---E--A--VRF---DELVDH-----  224 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH---HTC---E--E--CCG---GGHHHH-----
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH---cCC---c--e--ecH---HhHHHH-----
Confidence            578999999998 9999999999999998 899999987665444332   331   1  1  122   222222     


Q ss_pred             HHhCCccEEEeCCCCC
Q psy9256         122 QQFGCLDILINNAGRS  137 (265)
Q Consensus       122 ~~~g~ldilinnAg~~  137 (265)
                        ..+.|++|++.|..
T Consensus       225 --l~~aDvVi~at~~~  238 (404)
T 1gpj_A          225 --LARSDVVVSATAAP  238 (404)
T ss_dssp             --HHTCSEEEECCSSS
T ss_pred             --hcCCCEEEEccCCC
Confidence              24689999998754

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.38  E-value=0.043  Score=47.03  Aligned_cols=90  Identities=20%  Similarity=0.243  Sum_probs=58.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++-+..-..+++..+...+.. +....-+....+.+.+...+                       +    .+.
T Consensus        56 ~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~  108 (281)
T 4dry_A           56 EGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAA-----------------------V----RAE  108 (281)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH-----------------------H----HHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHH-----------------------H----HHH
Confidence            4667888877666566677777554333 34444444444444443322                       2    356


Q ss_pred             hCCccEEEeCCCCCcc-cccchhhhHHHHHhhhcccCCc
Q psy9256         124 FGCLDILINNAGRSQR-AAWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       124 ~g~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~~~~~~  161 (265)
                      +|++|++|||||+... ..+.+.+.++++..+..|....
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~  147 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGA  147 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHH
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHH
Confidence            7999999999999755 5777888888888877776543

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.36  E-value=0.005  Score=55.10  Aligned_cols=79  Identities=20%  Similarity=0.292  Sum_probs=53.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh-HHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT-KYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~  121 (265)
                      -.|++++|+|+ +++|...+......|+ +|+.+++++++++.+++    .+.   .   ...|.++. +++.   +.++
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa---~---~vi~~~~~~~~~~---~~v~  254 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGA---T---ECINPQDFSKPIQ---EVLI  254 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTC---S---EEECGGGCSSCHH---HHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCC---c---eEeccccccccHH---HHHH
Confidence            36889999996 8999999888878899 79999998887765543    332   1   12344431 2222   2233


Q ss_pred             HHh-CCccEEEeCCCC
Q psy9256         122 QQF-GCLDILINNAGR  136 (265)
Q Consensus       122 ~~~-g~ldilinnAg~  136 (265)
                      +.. +..|++|+++|.
T Consensus       255 ~~~~~g~D~vid~~g~  270 (373)
T 2fzw_A          255 EMTDGGVDYSFECIGN  270 (373)
T ss_dssp             HHTTSCBSEEEECSCC
T ss_pred             HHhCCCCCEEEECCCc
Confidence            333 579999999984

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.35  E-value=0.015  Score=51.73  Aligned_cols=78  Identities=24%  Similarity=0.313  Sum_probs=52.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCC--ChHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT--QTKYHRRCFDAVI  121 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~  121 (265)
                      .|++++|+|+ +++|...+......|+ +|+.+++++++++.+    ++.+.   .   ...|..  +.++   +.+.+.
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa---~---~vi~~~~~~~~~---~~~~i~  236 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEIGA---D---LVLQISKESPQE---IARKVE  236 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTC---S---EEEECSSCCHHH---HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHhCC---C---EEEcCcccccch---HHHHHH
Confidence            5889999996 8999998887778899 899999877665443    33442   1   123444  2222   223333


Q ss_pred             HHh-CCccEEEeCCCC
Q psy9256         122 QQF-GCLDILINNAGR  136 (265)
Q Consensus       122 ~~~-g~ldilinnAg~  136 (265)
                      +.. +..|++|+++|.
T Consensus       237 ~~~~~g~D~vid~~g~  252 (356)
T 1pl8_A          237 GQLGCKPEVTIECTGA  252 (356)
T ss_dssp             HHHTSCCSEEEECSCC
T ss_pred             HHhCCCCCEEEECCCC
Confidence            333 579999999984

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.35  E-value=0.014  Score=49.46  Aligned_cols=86  Identities=21%  Similarity=0.293  Sum_probs=57.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHH-cC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSK-CG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~-~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |-.+++++-+..-....+..+.. .+ .++....-+....+.+.+....                       +    .+.
T Consensus        32 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~   84 (265)
T 3lf2_A           32 GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA-----------------------C----ERT   84 (265)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH-----------------------H----HHH
Confidence            56677777665555666666665 33 3355554455555444443322                       2    356


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      +|++|++|||||+.....+.+.+.++++..+..|.
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~  119 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKF  119 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHH
Confidence            79999999999998888888888888877766654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.34  E-value=0.016  Score=49.37  Aligned_cols=87  Identities=20%  Similarity=0.199  Sum_probs=60.6

Q ss_pred             CcEEEEcCC-CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGA-SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.+++++- .......+...+.+.|.++....-+....+.+.+.+.+                       +    .+.+
T Consensus        53 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----------------------~----~~~~  105 (271)
T 4iin_A           53 GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQT-----------------------I----VQSD  105 (271)
T ss_dssp             TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH-----------------------H----HHhc
Confidence            556777766 44566677777777787877766565555555444332                       2    2457


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      |++|++|||||+.....+.+.+.++++..+..|..
T Consensus       106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~  140 (271)
T 4iin_A          106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLT  140 (271)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccH
Confidence            89999999999988887777787877777666553

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.34  E-value=0.042  Score=48.07  Aligned_cols=90  Identities=18%  Similarity=0.095  Sum_probs=62.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |-.+++++-+..-...+...+...|.  ++....-+....+.+.+....                       +    .+.
T Consensus        32 G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----------------------~----~~~   84 (319)
T 3ioy_A           32 GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADE-----------------------V----EAR   84 (319)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHH-----------------------H----HHH
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHH-----------------------H----HHh
Confidence            55677877776666667777766665  566555555555444443322                       1    356


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      +|++|++|||||+.....+.+.+.+.++..+..|....+
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~  123 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVV  123 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHH
Confidence            799999999999988888888888888888777765443

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.34  E-value=0.006  Score=54.39  Aligned_cols=77  Identities=18%  Similarity=0.284  Sum_probs=53.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|++++|+|+ +|+|...+...... |++|+.+++++++++.++    +.++   .   ...|..+.  .   .+.+++.
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~----~lGa---~---~vi~~~~~--~---~~~v~~~  249 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGA---D---HVVDARRD--P---VKQVMEL  249 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTC---S---EEEETTSC--H---HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH----HhCC---C---EEEeccch--H---HHHHHHH
Confidence            6899999999 79999988877778 999999998876665443    3442   1   12354443  2   2233333


Q ss_pred             h-C-CccEEEeCCCCC
Q psy9256         124 F-G-CLDILINNAGRS  137 (265)
Q Consensus       124 ~-g-~ldilinnAg~~  137 (265)
                      . | +.|++|+++|..
T Consensus       250 ~~g~g~Dvvid~~G~~  265 (359)
T 1h2b_A          250 TRGRGVNVAMDFVGSQ  265 (359)
T ss_dssp             TTTCCEEEEEESSCCH
T ss_pred             hCCCCCcEEEECCCCc
Confidence            3 4 699999999953

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.34  E-value=0.014  Score=49.45  Aligned_cols=87  Identities=14%  Similarity=0.171  Sum_probs=56.3

Q ss_pred             CcEEEEc-CCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWIT-GASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlIt-Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.++++ .-...-.......+...|.++....-+....+.+.+...+                       +    .+.+
T Consensus        32 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~   84 (259)
T 3edm_A           32 GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISA-----------------------A----ADKF   84 (259)
T ss_dssp             TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH-----------------------H----HHHh
Confidence            5566666 4444445556666666676665555455555544443322                       2    3567


Q ss_pred             CCccEEEeCCCCC-cccccchhhhHHHHHhhhcccC
Q psy9256         125 GCLDILINNAGRS-QRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       125 g~ldilinnAg~~-~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      |++|++|||||+. ....+.+.+.+.++..+..|..
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~  120 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLT  120 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTH
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHH
Confidence            9999999999987 5567777788887777766654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.33  E-value=0.085  Score=43.93  Aligned_cols=91  Identities=20%  Similarity=0.185  Sum_probs=60.1

Q ss_pred             CcEEEE-cCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH-
Q psy9256          46 NKVVWI-TGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ-  123 (265)
Q Consensus        46 gk~vlI-tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-  123 (265)
                      |-.+++ .+-...-....++.+...+.++....-+....+...+...                       .+.+...+. 
T Consensus        31 G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----------------------~~~~~~~~~~   87 (255)
T 3icc_A           31 GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYS-----------------------SLDNELQNRT   87 (255)
T ss_dssp             TCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH-----------------------HHHHHHHHHH
T ss_pred             CCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHH-----------------------HHHHHhcccc
Confidence            445555 4666666777888888888887776666555554444322                       222222222 


Q ss_pred             -hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         124 -FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 -~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                       .+++|++|||||+.....+.+.+.+.++..+..|..
T Consensus        88 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~  124 (255)
T 3icc_A           88 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAK  124 (255)
T ss_dssp             SSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             cCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhch
Confidence             357999999999988777778888887777766664

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.32  E-value=0.018  Score=48.53  Aligned_cols=85  Identities=13%  Similarity=0.175  Sum_probs=51.7

Q ss_pred             CcEEEEcCCCCch--hHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGI--GEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GI--G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |-.+++++-+..-  ...+++.+...|.++....-+....+.+.+...                       .+    .+.
T Consensus        26 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~-----------------------~~----~~~   78 (258)
T 3a28_C           26 GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAID-----------------------EA----AEK   78 (258)
T ss_dssp             TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH-----------------------HH----HHH
T ss_pred             CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH-----------------------HH----HHH
Confidence            4456666544433  345556665556666555445444444443322                       22    346


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYA  157 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~  157 (265)
                      +|++|++|||||+.....+.+.+.++++..+..|
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N  112 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVN  112 (258)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhc
Confidence            7999999999999877777777777666555444

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.32  E-value=0.045  Score=46.38  Aligned_cols=86  Identities=20%  Similarity=0.151  Sum_probs=57.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKC--GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|-.+++++-+..-....+..+...  +..+....-+....+.+.+..+                       +       
T Consensus        33 ~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~-----------------------~-------   82 (267)
T 3t4x_A           33 EGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE-----------------------K-------   82 (267)
T ss_dssp             TTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH-----------------------H-------
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH-----------------------h-------
Confidence            3666777776665556667777655  3455554444444444333222                       1       


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (265)
                       +|++|++|||||+.....+.+.+.++++..+..|....
T Consensus        83 -~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~  120 (267)
T 3t4x_A           83 -YPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSG  120 (267)
T ss_dssp             -CCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHH
T ss_pred             -cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHH
Confidence             36899999999999888888888888888887776543

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.31  E-value=0.0063  Score=53.92  Aligned_cols=71  Identities=20%  Similarity=0.267  Sum_probs=51.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|++++|+|+ +++|...+......|++|+.+++++++.+.+++    .++  ..+  +    ++++.+.+        
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa--~~v--~----~~~~~~~~--------  233 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGV--KHF--Y----TDPKQCKE--------  233 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTC--SEE--E----SSGGGCCS--------
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCC--Cee--c----CCHHHHhc--------
Confidence            36899999997 899999988888889999999999988775543    332  122  2    33332211        


Q ss_pred             hCCccEEEeCCCCC
Q psy9256         124 FGCLDILINNAGRS  137 (265)
Q Consensus       124 ~g~ldilinnAg~~  137 (265)
                        ..|++++++|..
T Consensus       234 --~~D~vid~~g~~  245 (348)
T 3two_A          234 --ELDFIISTIPTH  245 (348)
T ss_dssp             --CEEEEEECCCSC
T ss_pred             --CCCEEEECCCcH
Confidence              789999998854

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.31  E-value=0.018  Score=49.28  Aligned_cols=87  Identities=17%  Similarity=0.107  Sum_probs=60.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-...++..+...|.++....-+....+...+..                       +.+    .+. 
T Consensus        56 ~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~-----------------------~~~----~~~-  107 (275)
T 4imr_A           56 AGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLI-----------------------ERA----EAI-  107 (275)
T ss_dssp             TTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHH-----------------------HHH----HHH-
T ss_pred             CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH-----------------------HHH----HHh-
Confidence            3667888888877778888888887777666544433333333222                       112    123 


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      |++|++|||||+.....+.+.+.++++..+..|..
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  142 (275)
T 4imr_A          108 APVDILVINASAQINATLSALTPNDLAFQLAVNLG  142 (275)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            89999999999988888888888888877776654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.28  E-value=0.012  Score=50.58  Aligned_cols=88  Identities=23%  Similarity=0.283  Sum_probs=54.0

Q ss_pred             CCcEEEEcCC-CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGA-SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++. ...-...++..+...|.++....-+....+.+.+...+                       +    .+.
T Consensus        52 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~~  104 (280)
T 4da9_A           52 SGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDA-----------------------V----VAE  104 (280)
T ss_dssp             TTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHH-----------------------H----HHH
T ss_pred             CCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-----------------------H----HHH
Confidence            3666777774 44445566777777777776665444444443333222                       2    356


Q ss_pred             hCCccEEEeCCCC--CcccccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGR--SQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~--~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +|++|++|||||+  .....+.+.+.++++..+..|..
T Consensus       105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~  142 (280)
T 4da9_A          105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLR  142 (280)
T ss_dssp             HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHH
T ss_pred             cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhH
Confidence            7999999999999  44556777777777777665543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.27  E-value=0.054  Score=45.81  Aligned_cols=48  Identities=8%  Similarity=-0.101  Sum_probs=27.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecC---CCcHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCG-AKLVLSARS---SSNLERVKNLCVQ   92 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~---~~~~~~~~~~~~~   92 (265)
                      .|-.+++++-+..-..++++.+.+.+ .++....-+   ++..+++.+...+
T Consensus        31 ~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A           31 LGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             TTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            57788888877666677777776644 344443333   3334444444433

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.27  E-value=0.016  Score=49.58  Aligned_cols=88  Identities=17%  Similarity=0.120  Sum_probs=59.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHH-cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++-+..-....+..+.. .|.++....-+....+.+.+.+.+                       +    .+.
T Consensus        50 ~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~  102 (277)
T 4fc7_A           50 HGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQ-----------------------A----LKE  102 (277)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH-----------------------H----HHH
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----------------------H----HHH
Confidence            356677777665555556666643 466666665555555554443332                       2    356


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +|++|+||||||+.....+.+.+.+.++..+..|..
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~  138 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTS  138 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhH
Confidence            799999999999988777888888888877776654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.26  E-value=0.016  Score=49.68  Aligned_cols=89  Identities=15%  Similarity=0.211  Sum_probs=58.7

Q ss_pred             CCcEEEEcCC-CCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGA-SSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGa-s~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|-.+++++- ...-...++..+... +.++....-+....+.+.+...+                       +    .+
T Consensus        48 ~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~  100 (281)
T 3v2h_A           48 AGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM-----------------------V----AD  100 (281)
T ss_dssp             TTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH-----------------------H----HH
T ss_pred             CCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH-----------------------H----HH
Confidence            3566777776 334445556666544 55666655455555444443322                       2    35


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      .+|++|++|||||+.....+.+.+.++++..+..|...
T Consensus       101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g  138 (281)
T 3v2h_A          101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSS  138 (281)
T ss_dssp             HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHH
Confidence            67999999999999888888888888888877776643

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.25  E-value=0.0049  Score=54.58  Aligned_cols=76  Identities=17%  Similarity=0.160  Sum_probs=51.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCC-hHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKC--GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ-TKYHRRCFDAVI  121 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~  121 (265)
                      .|++++|+|+ +++|...+......  |++|+.+++++++.+.+++    .++  ..    ..|..+ ++    ..+...
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa--~~----vi~~~~~~~----~~~~~~  234 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGA--DY----VSEMKDAES----LINKLT  234 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTC--SE----EECHHHHHH----HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCC--CE----EeccccchH----HHHHhh
Confidence            7999999999 89999998888788  9999999988776654433    332  11    123222 21    222222


Q ss_pred             HHhCCccEEEeCCCC
Q psy9256         122 QQFGCLDILINNAGR  136 (265)
Q Consensus       122 ~~~g~ldilinnAg~  136 (265)
                      + -.+.|++|+++|.
T Consensus       235 ~-g~g~D~vid~~g~  248 (344)
T 2h6e_A          235 D-GLGASIAIDLVGT  248 (344)
T ss_dssp             T-TCCEEEEEESSCC
T ss_pred             c-CCCccEEEECCCC
Confidence            2 1279999999984

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.25  E-value=0.075  Score=46.24  Aligned_cols=39  Identities=31%  Similarity=0.483  Sum_probs=33.0

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCC
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSS   80 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~   80 (265)
                      ...+.++.|+|.|+ +|+|..+++.|++.|. ++.+++++.
T Consensus        31 q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             -CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            45677889999988 8999999999999995 688888765

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.25  E-value=0.018  Score=48.73  Aligned_cols=86  Identities=17%  Similarity=0.152  Sum_probs=53.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...++..+...|.++....-+....+.+.+...                       .+    .+.+|
T Consensus        31 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----------------------~~----~~~~g   83 (262)
T 1zem_A           31 GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVD-----------------------SV----VRDFG   83 (262)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHH-----------------------HH----HHHHS
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-----------------------HH----HHHhC
Confidence            5556666655443445566666667666555445444444443332                       22    34579


Q ss_pred             CccEEEeCCCCC-cccccchhhhHHHHHhhhccc
Q psy9256         126 CLDILINNAGRS-QRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       126 ~ldilinnAg~~-~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      ++|++|||||+. ....+.+.+.++++..+..|.
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~  117 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINV  117 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhh
Confidence            999999999997 666667777777777666554

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.25  E-value=0.013  Score=50.41  Aligned_cols=87  Identities=20%  Similarity=0.191  Sum_probs=58.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...++..+...|.++....-+....+.+.+....                       +    .+.+|
T Consensus        32 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~g   84 (280)
T 3tox_A           32 GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVEL-----------------------A----VRRFG   84 (280)
T ss_dssp             TCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHH-----------------------H----HHHHS
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----------------------H----HHHcC
Confidence            56677777666555667777766677776665555554444443322                       2    35679


Q ss_pred             CccEEEeCCCCCc-ccccchhhhHHHHHhhhcccC
Q psy9256         126 CLDILINNAGRSQ-RAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       126 ~ldilinnAg~~~-~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      ++|++|||||+.. ...+.+.+.+.++..+..|..
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~  119 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLT  119 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            9999999999874 466777777777777666543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.23  E-value=0.082  Score=44.48  Aligned_cols=41  Identities=32%  Similarity=0.374  Sum_probs=33.6

Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (265)
                      .+++|++|++|||||+.....+.+.+.+.++..+..|....
T Consensus        77 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~  117 (259)
T 4e6p_A           77 VEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGT  117 (259)
T ss_dssp             HHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHH
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHH
Confidence            35689999999999998888888888888888877776433

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.23  E-value=0.017  Score=49.29  Aligned_cols=72  Identities=18%  Similarity=0.223  Sum_probs=49.0

Q ss_pred             HHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCccc
Q psy9256          61 ALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  140 (265)
Q Consensus        61 aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~  140 (265)
                      .....+...|.++....-+-...+.+.+..++                       +    .+.+|++|++|||||+....
T Consensus        61 ~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~g~id~lv~nAg~~~~~  113 (281)
T 3s55_A           61 ETVALVEKTGRRCISAKVDVKDRAALESFVAE-----------------------A----EDTLGGIDIAITNAGISTIA  113 (281)
T ss_dssp             HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----------------------H----HHHHTCCCEEEECCCCCCCC
T ss_pred             HHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH-----------------------H----HHhcCCCCEEEECCCCCCCC
Confidence            34455556677776665555555554443322                       2    35679999999999998888


Q ss_pred             ccchhhhHHHHHhhhcccC
Q psy9256         141 AWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~  159 (265)
                      .+.+.+.++++..+..|..
T Consensus       114 ~~~~~~~~~~~~~~~~N~~  132 (281)
T 3s55_A          114 LLPEVESAQWDEVIGTNLT  132 (281)
T ss_dssp             CTTCCCHHHHHHHHHHHTH
T ss_pred             CcccCCHHHHHHHHHHHhH
Confidence            7888888888877766654

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=96.22  E-value=0.036  Score=48.93  Aligned_cols=35  Identities=31%  Similarity=0.336  Sum_probs=30.8

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCG--AKLVLSARSSS   81 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~   81 (265)
                      ..++||||++.+|..++..|+..|  ..|++.+++++
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            458999999999999999999988  78999887765

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.22  E-value=0.032  Score=48.71  Aligned_cols=79  Identities=13%  Similarity=0.105  Sum_probs=49.7

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCC--eEEEEec--CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGA--KLVLSAR--SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .++||||++.+|..++..++..|.  .+++.++  ++++++.....+........+..+.. +  +.           +.
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~-----------~a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY-----------ED   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH-----------HH
Confidence            488999999999999999998774  5888888  65544433333332211111222222 2  22           23


Q ss_pred             hCCccEEEeCCCCCccc
Q psy9256         124 FGCLDILINNAGRSQRA  140 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~  140 (265)
                      +.+-|++|+.||..++.
T Consensus        68 ~~~aDvVi~~ag~~~~~   84 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP   84 (303)
T ss_dssp             GTTCSEEEECCCCCCCT
T ss_pred             hCCCCEEEEcCCCCCCC
Confidence            46789999999986543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.22  E-value=0.026  Score=47.45  Aligned_cols=83  Identities=23%  Similarity=0.343  Sum_probs=51.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..  ...+..+.+.|.++....-+....+.+.+...                       .+    .+.+|
T Consensus        28 G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~-----------------------~~----~~~~g   78 (255)
T 2q2v_A           28 GANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFA-----------------------LA----EREFG   78 (255)
T ss_dssp             TCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHH-----------------------HH----HHHHS
T ss_pred             CCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH-----------------------HH----HHHcC
Confidence            555666665544  55666676667666555444444444433322                       22    34579


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYA  157 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~  157 (265)
                      ++|++|||||+.....+.+.+.++++..+..|
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N  110 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALN  110 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence            99999999999877666666766666555443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.21  E-value=0.0096  Score=49.37  Aligned_cols=89  Identities=19%  Similarity=0.232  Sum_probs=60.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHH-HcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITGASSGIGEALALQLS-KCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.+++++-+..-...++..+. ..|.++....-+....+.+.+...+                       +    .+.+
T Consensus        26 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----------------------~----~~~~   78 (235)
T 3l77_A           26 GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKK-----------------------V----LERF   78 (235)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC------------------------H----HHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHH-----------------------H----HHhc
Confidence            5567777666555566666665 4577776665555555544443211                       1    3457


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (265)
                      |++|++|||||+.....+.+.+.+.++..+..|....
T Consensus        79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~  115 (235)
T 3l77_A           79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGV  115 (235)
T ss_dssp             SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHH
T ss_pred             CCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHH
Confidence            9999999999998888888888888888877776543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.21  E-value=0.018  Score=48.72  Aligned_cols=87  Identities=25%  Similarity=0.265  Sum_probs=58.4

Q ss_pred             CcEEEEcCCCCchh-HHHHHHHHH-cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIG-EALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG-~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |-.+++++.+..-. ...++.+.+ .|.++....-+....+.+.+...+                       +    .+.
T Consensus        46 G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----------------------~----~~~   98 (267)
T 3gdg_A           46 GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD-----------------------V----VAD   98 (267)
T ss_dssp             SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH-----------------------H----HHH
T ss_pred             CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH-----------------------H----HHH
Confidence            56677776665433 666666654 366766665555555554443322                       2    356


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      +|++|++|||||+.....+.+.+.+.++..+..|..
T Consensus        99 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~  134 (267)
T 3gdg_A           99 FGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLN  134 (267)
T ss_dssp             TSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTH
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcch
Confidence            799999999999988877778888887777766654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.20  E-value=0.043  Score=49.57  Aligned_cols=85  Identities=18%  Similarity=0.122  Sum_probs=59.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecC-----------CChH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDV-----------TQTK  111 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----------~~~~  111 (265)
                      .+++++++|.|+ +.+|...++.+...|++|++.+|++++++.+.+    .+     ..++.+|.           ...+
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lG-----a~~~~l~~~~~~~~gya~~~~~~  250 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VG-----AQWLDLGIDAAGEGGYARELSEA  250 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TT-----CEECCCC-------------CHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC-----CeEEeccccccccccchhhhhHH
Confidence            457889999999 799999999999999999999999888776644    22     11222221           1111


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCC
Q psy9256         112 YHRRCFDAVIQQFGCLDILINNAGRS  137 (265)
Q Consensus       112 ~~~~~~~~~~~~~g~ldilinnAg~~  137 (265)
                      ....-.+...+...+-|++|+.+.+-
T Consensus       251 ~~~~~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          251 ERAQQQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEECCCCT
T ss_pred             HHhhhHHHHHHHHhcCCEEEECCCCC
Confidence            23334455666779999999988653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.18  E-value=0.022  Score=48.72  Aligned_cols=86  Identities=15%  Similarity=0.133  Sum_probs=55.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCC---eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGA---KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      |-.+++++-+..-....+..+.+.|.   ++....-+....+.+.+...+                       +    .+
T Consensus        35 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~   87 (281)
T 3svt_A           35 GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA-----------------------V----TA   87 (281)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH-----------------------H----HH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH-----------------------H----HH
Confidence            55677777665555667777776665   666655555555544443322                       2    35


Q ss_pred             HhCCccEEEeCCCC-CcccccchhhhHHHHHhhhccc
Q psy9256         123 QFGCLDILINNAGR-SQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       123 ~~g~ldilinnAg~-~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      .+|++|++|||||+ .....+.+.+.++++..+..|.
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~  124 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNV  124 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhh
Confidence            67999999999998 4555666777777776665554

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.18  E-value=0.006  Score=54.35  Aligned_cols=76  Identities=16%  Similarity=0.129  Sum_probs=53.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|++++|+|+ +|+|...+......|++|+.+++++++.+.+.+   +.+.  ..    ..|..+.+.       +++..
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa--~~----vi~~~~~~~-------~~~~~  242 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGA--DD----YVIGSDQAK-------MSELA  242 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCC--SC----EEETTCHHH-------HHHST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCC--ce----eeccccHHH-------HHHhc
Confidence            6899999995 899999988887889999999998877655432   2332  11    134444332       22334


Q ss_pred             CCccEEEeCCCCC
Q psy9256         125 GCLDILINNAGRS  137 (265)
Q Consensus       125 g~ldilinnAg~~  137 (265)
                      ++.|++|+++|..
T Consensus       243 ~g~D~vid~~g~~  255 (357)
T 2cf5_A          243 DSLDYVIDTVPVH  255 (357)
T ss_dssp             TTEEEEEECCCSC
T ss_pred             CCCCEEEECCCCh
Confidence            6799999999953

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.18  E-value=0.0034  Score=56.16  Aligned_cols=76  Identities=17%  Similarity=0.248  Sum_probs=51.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHH-cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|++++|+||++++|...+..... .|++|+.+++++++++.++    +.+.  ..    ..|-.+ +    +.+.+++.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~----~lGa--d~----vi~~~~-~----~~~~v~~~  235 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK----SLGA--HH----VIDHSK-P----LAAEVAAL  235 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH----HTTC--SE----EECTTS-C----HHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH----HcCC--CE----EEeCCC-C----HHHHHHHh
Confidence            689999999999999988766655 5899999998876665443    3442  11    234332 2    22333333


Q ss_pred             h-CCccEEEeCCC
Q psy9256         124 F-GCLDILINNAG  135 (265)
Q Consensus       124 ~-g~ldilinnAg  135 (265)
                      . ++.|++++++|
T Consensus       236 ~~~g~Dvvid~~g  248 (363)
T 4dvj_A          236 GLGAPAFVFSTTH  248 (363)
T ss_dssp             CSCCEEEEEECSC
T ss_pred             cCCCceEEEECCC
Confidence            3 47999999998

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.17  E-value=0.046  Score=47.18  Aligned_cols=90  Identities=21%  Similarity=0.217  Sum_probs=57.8

Q ss_pred             CCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|-.+++++-+.  .-...+...+...|.++....-+....+.+.+...+                       +    .+
T Consensus        72 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----------------------~----~~  124 (294)
T 3r3s_A           72 EGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHK-----------------------A----RE  124 (294)
T ss_dssp             TTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHH-----------------------H----HH
T ss_pred             CCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH-----------------------H----HH
Confidence            356677766542  223445555556677776665555555444443322                       2    35


Q ss_pred             HhCCccEEEeCCCCCc-ccccchhhhHHHHHhhhcccCCc
Q psy9256         123 QFGCLDILINNAGRSQ-RAAWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       123 ~~g~ldilinnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~  161 (265)
                      .+|++|++|||||+.. ...+.+.+.+.++..+..|....
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~  164 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFAL  164 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHH
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHH
Confidence            6799999999999965 45677888888888887776543

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.15  E-value=0.029  Score=53.02  Aligned_cols=73  Identities=11%  Similarity=0.083  Sum_probs=54.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ..+.++|.|. +-.|..+++.|.+.|.+|++++.+++..+++.+.        ....++..|.++++.+.++      ..
T Consensus       126 ~~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~--------~~~~~i~Gd~~~~~~L~~a------~i  190 (565)
T 4gx0_A          126 TRGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQ--------EGFKVVYGSPTDAHVLAGL------RV  190 (565)
T ss_dssp             CCSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHS--------CSSEEEESCTTCHHHHHHT------TG
T ss_pred             cCCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh--------cCCeEEEeCCCCHHHHHhc------Cc
Confidence            3456788887 5699999999999999999999987766554431        1467899999999887766      22


Q ss_pred             CCccEEEe
Q psy9256         125 GCLDILIN  132 (265)
Q Consensus       125 g~ldilin  132 (265)
                      .+-|.+|.
T Consensus       191 ~~a~~vi~  198 (565)
T 4gx0_A          191 AAARSIIA  198 (565)
T ss_dssp             GGCSEEEE
T ss_pred             ccCCEEEE
Confidence            34555554

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.15  E-value=0.0052  Score=55.17  Aligned_cols=79  Identities=20%  Similarity=0.208  Sum_probs=53.8

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCC-hHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ-TKYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~  121 (265)
                      -.|++++|+|+ +++|...+......|+ +|+.+++++++++.++    +.++   .   ...|..+ .+++   .+.++
T Consensus       192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~----~lGa---~---~vi~~~~~~~~~---~~~i~  257 (378)
T 3uko_A          192 EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK----KFGV---N---EFVNPKDHDKPI---QEVIV  257 (378)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH----TTTC---C---EEECGGGCSSCH---HHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCC---c---EEEccccCchhH---HHHHH
Confidence            36889999998 8999998888888899 7999999988776443    3332   1   1234432 1222   22333


Q ss_pred             HHh-CCccEEEeCCCC
Q psy9256         122 QQF-GCLDILINNAGR  136 (265)
Q Consensus       122 ~~~-g~ldilinnAg~  136 (265)
                      +.. |..|++|+++|.
T Consensus       258 ~~~~gg~D~vid~~g~  273 (378)
T 3uko_A          258 DLTDGGVDYSFECIGN  273 (378)
T ss_dssp             HHTTSCBSEEEECSCC
T ss_pred             HhcCCCCCEEEECCCC
Confidence            333 489999999994

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.15  E-value=0.022  Score=47.74  Aligned_cols=87  Identities=15%  Similarity=0.123  Sum_probs=57.1

Q ss_pred             CcEEEEcC-CCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          46 NKVVWITG-ASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        46 gk~vlItG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |-.+++++ -...-.......+...+.++....-+....+.+.+...+                       +    .+.+
T Consensus        37 G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~   89 (256)
T 3ezl_A           37 GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDK-----------------------V----KAEV   89 (256)
T ss_dssp             TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH-----------------------H----HHHT
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHH-----------------------H----HHhc
Confidence            44455544 445556667777777777766655555555544443322                       2    3567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      |++|++|||||+.....+.+.+.++++..+..|..
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~  124 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLT  124 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhH
Confidence            99999999999988777777777777766665543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.14  E-value=0.024  Score=48.50  Aligned_cols=84  Identities=17%  Similarity=0.240  Sum_probs=51.1

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |-.+++++-+..-...++..+.+.|.++....-+....+.+.+...                       .+    .+.+|
T Consensus        46 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~-----------------------~~----~~~~g   98 (277)
T 2rhc_B           46 GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVA-----------------------AV----VERYG   98 (277)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH-----------------------HH----HHHTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH-----------------------HH----HHHhC
Confidence            5556666654433445566666667666555444444444433322                       22    35679


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTY  156 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~  156 (265)
                      ++|++|||||+.....+.+.+.++++..+..
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~  129 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVET  129 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence            9999999999987766666666666554443

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.13  E-value=0.014  Score=50.62  Aligned_cols=41  Identities=24%  Similarity=0.290  Sum_probs=36.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      .++.||.++|.|+|+-.|+.+|+.|.+.|++|.++.|+...
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~  196 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD  196 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchh
Confidence            46899999999998889999999999999999988765433

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.13  E-value=0.022  Score=48.53  Aligned_cols=85  Identities=16%  Similarity=0.085  Sum_probs=53.1

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh-
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF-  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-  124 (265)
                      |-.+++++-+..-...++..+...|.++....-+....+.+.+...                       .+    .+.+ 
T Consensus        45 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----------------------~~----~~~~~   97 (273)
T 1ae1_A           45 GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQ-----------------------TV----AHVFD   97 (273)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH-----------------------HH----HHHTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH-----------------------HH----HHHcC
Confidence            5566666655443445566666667676655445444444443322                       22    3456 


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYA  157 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~  157 (265)
                      |++|++|||||+.....+.+.+.++++..+..|
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N  130 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTN  130 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHh
Confidence            899999999999877777777777776655544

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.13  E-value=0.038  Score=48.87  Aligned_cols=85  Identities=12%  Similarity=0.092  Sum_probs=53.2

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCF  117 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~  117 (265)
                      +.++..++.+.|+|+ +++|.+++..++..|.  .+++.+++++.++.....+.........+... .  .+.       
T Consensus         3 ~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~--~~~-------   71 (326)
T 3vku_A            3 SITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-S--AEY-------   71 (326)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-E--CCG-------
T ss_pred             ccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-E--CcH-------
Confidence            345667778899996 8999999999999886  79999998766665444443321100122222 1  122       


Q ss_pred             HHHHHHhCCccEEEeCCCCCcc
Q psy9256         118 DAVIQQFGCLDILINNAGRSQR  139 (265)
Q Consensus       118 ~~~~~~~g~ldilinnAg~~~~  139 (265)
                          +.+.+-|++|..||..++
T Consensus        72 ----~a~~~aDiVvi~ag~~~k   89 (326)
T 3vku_A           72 ----SDAKDADLVVITAGAPQK   89 (326)
T ss_dssp             ----GGGTTCSEEEECCCCC--
T ss_pred             ----HHhcCCCEEEECCCCCCC
Confidence                335667999999998544

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.12  E-value=0.028  Score=47.40  Aligned_cols=85  Identities=21%  Similarity=0.169  Sum_probs=52.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh-
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF-  124 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-  124 (265)
                      |-.+++++-+..-...++..+...|.++....-+....+.+.+...                       .+    .+.+ 
T Consensus        33 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----------------------~~----~~~~~   85 (260)
T 2ae2_A           33 GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMN-----------------------TV----ANHFH   85 (260)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH-----------------------HH----HHHTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH-----------------------HH----HHHcC
Confidence            5556666554443445566666667776655445444444443322                       22    3456 


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYA  157 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~  157 (265)
                      |++|++|||||+.....+.+.+.++++..+..|
T Consensus        86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N  118 (260)
T 2ae2_A           86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSIN  118 (260)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHh
Confidence            899999999999877666666766666555443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.12  E-value=0.028  Score=47.43  Aligned_cols=86  Identities=26%  Similarity=0.326  Sum_probs=52.3

Q ss_pred             CcEEEEcCCCCch-hHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGI-GEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GI-G~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |-.+++++-+..- ...++..+.+. |.++....-+....+.+.+.+.                       .+    .+.
T Consensus        28 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~-----------------------~~----~~~   80 (260)
T 1x1t_A           28 GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVD-----------------------NA----VRQ   80 (260)
T ss_dssp             TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHH-----------------------HH----HHH
T ss_pred             CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHH-----------------------HH----HHh
Confidence            5566776655433 34455555443 6666555444444444433322                       22    345


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      +|++|++|||||+.....+.+.+.+.++..+..|.
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~  115 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNL  115 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHH
Confidence            79999999999998777777777777776665544

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.10  E-value=0.0088  Score=53.52  Aligned_cols=78  Identities=18%  Similarity=0.291  Sum_probs=52.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh-HHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT-KYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~  122 (265)
                      .|++++|+|+ +++|...+......|+ +|+.+++++++++.++    +.+.   .   ...|..+. +++.   +.+.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa---~---~vi~~~~~~~~~~---~~i~~  256 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----ELGA---T---ECLNPKDYDKPIY---EVICE  256 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HTTC---S---EEECGGGCSSCHH---HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH----HcCC---c---EEEecccccchHH---HHHHH
Confidence            5889999996 8999998887777899 7999998888776543    3332   1   12343321 1222   22333


Q ss_pred             Hh-CCccEEEeCCCC
Q psy9256         123 QF-GCLDILINNAGR  136 (265)
Q Consensus       123 ~~-g~ldilinnAg~  136 (265)
                      .. +..|++|+++|.
T Consensus       257 ~t~gg~Dvvid~~g~  271 (373)
T 1p0f_A          257 KTNGGVDYAVECAGR  271 (373)
T ss_dssp             HTTSCBSEEEECSCC
T ss_pred             HhCCCCCEEEECCCC
Confidence            33 579999999984

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.09  E-value=0.024  Score=48.01  Aligned_cols=85  Identities=18%  Similarity=0.171  Sum_probs=50.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKC--GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |-.+++++-+..-...++..+.+.  |.++....-+....+.+.+.+.                       .+    .+.
T Consensus        37 G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~-----------------------~~----~~~   89 (267)
T 1iy8_A           37 GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVT-----------------------AT----TER   89 (267)
T ss_dssp             TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHH-----------------------HH----HHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH-----------------------HH----HHH
Confidence            556666665443344455555443  5566555444444444443322                       22    346


Q ss_pred             hCCccEEEeCCCCCcc-cccchhhhHHHHHhhhcc
Q psy9256         124 FGCLDILINNAGRSQR-AAWEDIELEVDRELFTYA  157 (265)
Q Consensus       124 ~g~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~~  157 (265)
                      +|++|++|||||+... ..+.+.+.++++..+..|
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N  124 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSIN  124 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHh
Confidence            7999999999999766 566666666666555444

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.08  E-value=0.0088  Score=51.92  Aligned_cols=45  Identities=16%  Similarity=0.218  Sum_probs=38.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVK   87 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~   87 (265)
                      .++.+|.++|.|+ +|.|++++..|.+.|+ +|.+++|+.++.+++.
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4578999999998 6999999999999998 8999999877655543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	265
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	9e-30
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	3e-12
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	7e-29
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	9e-13
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-27
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-17
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-26
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	6e-08
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-25
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-24
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	6e-09
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-24
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-09
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	4e-24
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-15
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-24
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-15
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-24
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	6e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-23
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-14
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-23
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-13
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-22
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-08
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-22
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-04
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-22
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	4e-06
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	5e-22
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-11
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	1e-21
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-21
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-09
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	1e-21
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	5e-08
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-21
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-14
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-21
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-21
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	8e-04
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	4e-21
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	6e-21
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-12
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	9e-21
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	8e-10
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-20
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-20
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-20
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	3e-07
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-20
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-10
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	7e-20
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	5e-10
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-19
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-04
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-19
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-19
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	7e-04
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	6e-19
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-09
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	7e-19
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	9e-06
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	8e-19
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	9e-19
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-04
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-18
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	0.002
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	6e-18
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	7e-18
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	8e-12
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	7e-18
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	5e-10
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-17
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-04
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-17
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	7e-04
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-17
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	7e-17
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-17
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	3e-16
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	8e-16
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-04
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-15
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	5e-07
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-14
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-05
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-14
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-13
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-13
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	6e-13
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-06
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-12
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	6e-12
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-11
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-11
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-11
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	6e-11
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	1e-10
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	8e-10
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-09
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-09
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	4e-09
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	8e-05
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-08
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-07
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	6e-05
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	7e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.002
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.004

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  110 bits (277), Expect = 9e-30
 Identities = 33/111 (29%), Positives = 65/111 (58%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+NK V ITG+S+GIG   A+  ++ GA + ++ RSS  LE  + + +++G   + + ++
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
             DVT      +  ++ ++QFG +D+L+NNAG +   A+     +   +++
Sbjct: 63  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIY 113

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 62.7 bits (152), Expect = 3e-12
 Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 5/123 (4%)

Query: 143 EDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 202
           E +E      L +      + ++  DVT      +  ++ ++QFG +D+L+NNAG +   
Sbjct: 40  ERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPD 99

Query: 203 AWEDIELEVDRELFE----LNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS 258
           A+     +   +++     LN+ +V+ +++    + +A  +G  + V+S +AG    P  
Sbjct: 100 AFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQPDF 158

Query: 259 GSY 261
             Y
Sbjct: 159 LYY 161

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  108 bits (270), Expect = 7e-29
 Identities = 35/111 (31%), Positives = 56/111 (50%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  KV  ITG+S+GIG A A+  ++ GAK+ ++ R +  LE  +   + AG   Q++ ++
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
             DVT            + +FG LDIL+NNAG +   +          E +
Sbjct: 63  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESY 113

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 64.2 bits (156), Expect = 9e-13
 Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 5/123 (4%)

Query: 143 EDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 202
           E +E    + L       ++ ++  DVT            + +FG LDIL+NNAG +   
Sbjct: 40  ERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPD 99

Query: 203 AWEDIELEVDRE----LFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS 258
           +          E       LN+ SV++L++ A  +  +  +G  + ++S  +G+   P  
Sbjct: 100 SQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHL-SSTKGEIVNISSIASGLHATPDF 158

Query: 259 GSY 261
             Y
Sbjct: 159 PYY 161

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 3e-27
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           + +++  +TGAS GIG A+A  L + G K+V  AR+  N+E +   C  AG +P ++   
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-YPGTLIPY 66

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
             D++  +     F A+  Q   +DI INNAG ++            +++F
Sbjct: 67  RCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMF 117

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (190), Expect = 2e-17
 Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 1/114 (0%)

Query: 148 EVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 207
           E+  E  +  Y  ++     D++  +     F A+  Q   +DI INNAG ++       
Sbjct: 49  ELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSG 108

Query: 208 ELEVDRELFELNVFSVLSLSRIATSYFLAR-EQGGHLVVTSSIAGIVGAPYSGS 260
                +++F +NV ++   +R A      R    GH++  +S++G    P S +
Sbjct: 109 STSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT 162

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  100 bits (251), Expect = 5e-26
 Identities = 34/107 (31%), Positives = 59/107 (55%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+ K V ITG+S+GIG + A+  +K GA++ ++ R+   LE  K   ++AG   + I  +
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVD 150
             DVT+        +  + +FG +DIL+NNAG +      + +  V+
Sbjct: 62  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVE 108

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 50.0 bits (119), Expect = 6e-08
 Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVD--RELFE 217
             I  +  DVT+        +  + +FG +DIL+NNAG +      + +  V+  ++ F+
Sbjct: 56  EKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFK 115

Query: 218 LNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           LN  +V+ +++    +   + +G  + V+S +AG         Y
Sbjct: 116 LNFQAVIEMTQKTKEHL-IKTKGEIVNVSSIVAGPQAHSGYPYY 158

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 99.0 bits (246), Expect = 2e-25
 Identities = 28/179 (15%), Positives = 71/179 (39%), Gaps = 4/179 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              +V  +TG S G+G  +A  L++ G  +V+++R+            +   +       
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE--KYGVETMAF 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS-- 161
             DV+  +  ++  +AV ++FG LD ++N AG ++R   E+  L+  R++       +  
Sbjct: 61  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYY 120

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
           +      + +   +    +        + +   +A  + +     +   + +E     +
Sbjct: 121 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 179

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 97.1 bits (241), Expect = 1e-24
 Identities = 38/160 (23%), Positives = 63/160 (39%), Gaps = 3/160 (1%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F ++VV ITG  SG+G A A++L+  GAKL L   SS  LE  K   ++     + + T 
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE-VLTT 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DV+          A  ++FG +D   NNAG   +    +     + +         ++
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 203
                    K  R     ++     +  +     +S  AA
Sbjct: 121 --LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAA 158

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 53.2 bits (127), Expect = 6e-09
 Identities = 21/115 (18%), Positives = 37/115 (32%)

Query: 148 EVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 207
                +   A    + T   DV+          A  ++FG +D   NNAG   +    + 
Sbjct: 43  ASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTES 102

Query: 208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
               + +         + L        +  +  G +V T+S+ GI G      Y 
Sbjct: 103 FTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYA 157

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 95.1 bits (236), Expect = 3e-24
 Identities = 32/135 (23%), Positives = 47/135 (34%), Gaps = 8/135 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +K V ITGA+ GIG A     +K GA+LV        L          GAHP     +
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE---AVGAHP-----V 54

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            +DV       R F   +   G LD +++ AG ++      + LE    +       S  
Sbjct: 55  VMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFL 114

Query: 164 TLTLDVTQTKYHRRC 178
                    +     
Sbjct: 115 VAKAASEAMREKNPG 129

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 53.9 bits (129), Expect = 3e-09
 Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 2/102 (1%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
             + + +DV       R F   +   G LD +++ AG ++      + LE    +  +N+
Sbjct: 50  GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNL 109

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
                +++ A+     RE+    +V ++    +G     +Y 
Sbjct: 110 TGSFLVAKAASEAM--REKNPGSIVLTASRVYLGNLGQANYA 149

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 95.5 bits (237), Expect = 4e-24
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 4/113 (3%)

Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           N  + KV  ITG + GIG A+A +  + GAK++++ R S   E+      ++   P  I 
Sbjct: 2   NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKA----AKSVGTPDQIQ 57

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
               D +      + FDA  + FG +  L+NNAG +   + E+      R+L 
Sbjct: 58  FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLL 110

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 71.6 bits (175), Expect = 2e-15
 Identities = 28/102 (27%), Positives = 45/102 (44%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
            I     D +      + FDA  + FG +  L+NNAG +   + E+      R+L  +N+
Sbjct: 55  QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNL 114

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             V   +R+       +  G  ++  SSI G VG P  G+Y 
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYN 156

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 94.9 bits (236), Expect = 5e-24
 Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             +K+  ITG ++GIG A+A + +  GA + ++    +     +      G     + T+
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGR---RVLTV 57

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
             DV+Q          VI  FG  DIL+NNAG      ++++  E  ++ F
Sbjct: 58  KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTF 108

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 70.3 bits (172), Expect = 5e-15
 Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 1/101 (0%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
            + T+  DV+Q          VI  FG  DIL+NNAG      ++++  E  ++ FE+NV
Sbjct: 53  RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINV 112

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
            S   +++           G   +  +S    +       Y
Sbjct: 113 DSGFLMAKAFVPGMKRNGWGRI-INLTSTTYWLKIEAYTHY 152

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 95.1 bits (236), Expect = 5e-24
 Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 4/161 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + K   ITGA +GIG+ +A+  +  GA +V+S  ++     V +   Q G      +  
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---AFAC 65

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+T  +      D  I + G +DIL+NNAG      + D+ +   R  +        +
Sbjct: 66  RCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFH 124

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW 204
              L   + + +       I      +  IN    +   A 
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAA 165

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 41.2 bits (96), Expect = 6e-05
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDREL 215
                 +    D+T  +      D  I + G +DIL+NNAG      ++    +  R  
Sbjct: 57  QLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAY 115

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 92.6 bits (230), Expect = 4e-23
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 9/111 (8%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  K V +TG + GIG A+A   ++ GA + L        E  + +              
Sbjct: 3   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAF---------F 53

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
            +D+   +   R  +      G +D+L+NNA  +   +   + L   R + 
Sbjct: 54  QVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVL 104

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 68.7 bits (168), Expect = 2e-14
 Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 1/98 (1%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVL 224
             +D+   +   R  +      G +D+L+NNA  +   +   + L   R + E+N+ + +
Sbjct: 53  FQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPM 112

Query: 225 SLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
            LS +A          G +V  +S+ G+     + +Y 
Sbjct: 113 HLSALAAREMRKVGG-GAIVNVASVQGLFAEQENAAYN 149

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.4 bits (229), Expect = 4e-23
 Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
           N KV  +TGA+ GIG A A  L   GAK+ L   +     + K    +    PQ    + 
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-FEPQKTLFIQ 60

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE 143
            DV   +  R  F  V+  FG LDIL+NNAG +    WE
Sbjct: 61  CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWE 99

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (158), Expect = 4e-13
 Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 10/124 (8%)

Query: 143 EDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 202
            +  ++    L           +  DV   +  R  F  V+  FG LDIL+NNAG +   
Sbjct: 37  LEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEK 96

Query: 203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLA--REQGGHLVVTSSIAGIVGAPYSGS 260
            WE           ++N+ SV+S + +   Y       +GG ++  SS+AG++       
Sbjct: 97  NWEKT--------LQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPV 148

Query: 261 YTDH 264
           Y   
Sbjct: 149 YCAS 152

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 91.6 bits (227), Expect = 1e-22
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 5/112 (4%)

Query: 38  NKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHP 97
           ++R +    K V +TG + GIG A+  + +  GA +   AR+   L    +   + G   
Sbjct: 1   SQRWS-LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ- 58

Query: 98  QSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELE 148
             +     D +      +    V   F G LDILINN G  +     D   E
Sbjct: 59  --VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAE 108

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 51.6 bits (123), Expect = 2e-08
 Identities = 21/83 (25%), Positives = 28/83 (33%), Gaps = 1/83 (1%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
            +     D +      +    V   F G LDILINN G  +     D   E        N
Sbjct: 58  QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTN 117

Query: 220 VFSVLSLSRIATSYFLAREQGGH 242
           + S   LS++A     A   G  
Sbjct: 118 LESAYHLSQLAHPLLKASGCGNI 140

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 90.9 bits (225), Expect = 2e-22
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
           ++V  +TGA+SGIG  +A +L K G ++ + AR    L        +AG         T 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE---ADGRTC 58

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
           DV           AV++++G +D+L+NNAGR    A  ++  E+  ++          
Sbjct: 59  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFR 116

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 20/86 (23%), Positives = 37/86 (43%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
                    T DV           AV++++G +D+L+NNAGR    A  ++  E+  ++ 
Sbjct: 48  EAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVV 107

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGH 242
           E N+  V  +++         E+G  
Sbjct: 108 ETNLTGVFRVTKQVLKAGGMLERGTG 133

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 90.1 bits (223), Expect = 3e-22
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 6/105 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              KV  ++G + G+G +    +   GAK+V         + +      A     +   +
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM------AAELADAARYV 57

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
            LDVTQ    +   D  +  FG L +L+NNAG       ED  L 
Sbjct: 58  HLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALT 102

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 44.3 bits (104), Expect = 4e-06
 Identities = 20/77 (25%), Positives = 31/77 (40%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
           +   + LDVTQ    +   D  +  FG L +L+NNAG       ED  L   + + ++N+
Sbjct: 53  AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNL 112

Query: 221 FSVLSLSRIATSYFLAR 237
             V    R         
Sbjct: 113 TGVFLGIRAVVKPMKEA 129

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 89.7 bits (222), Expect = 5e-22
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 6/113 (5%)

Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           N    KV  +TG +SG+G  +   L   GAK+  S  + +  +++      A    +   
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL------AAELGERSM 55

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
            +  DV+          AV ++ G L++L+NNAG       E   LE    L 
Sbjct: 56  FVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLL 108

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 61.2 bits (148), Expect = 1e-11
 Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 2/101 (1%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
            +  DV+          AV ++ G L++L+NNAG       E   LE    L ++N  SV
Sbjct: 56  FVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESV 115

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDH 264
               +   +    +E GG ++  +S++  +       Y+  
Sbjct: 116 FIGCQQGIAAM--KETGGSIINMASVSSWLPIEQYAGYSAS 154

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 89.7 bits (222), Expect = 1e-21
 Identities = 37/219 (16%), Positives = 75/219 (34%), Gaps = 60/219 (27%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+ +VV +TGA  G+G A AL  ++ GA +V++                           
Sbjct: 5   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKG------------------- 45

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
                                          G+   AA + +E            R    
Sbjct: 46  ------------------------------VGKGSSAADKVVE----------EIRRRGG 65

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
               +    +   +     +  FG +D+++NNAG  +  ++  I  E    +  +++   
Sbjct: 66  KAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGS 125

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             ++R A  +   +   G +++T+S +GI G     +Y+
Sbjct: 126 FQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQANYS 163

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 89.4 bits (221), Expect = 1e-21
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 4/109 (3%)

Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           N   +KV  ITG + GIGE  A    + GAK+V++  +  + ++V N           I 
Sbjct: 2   NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV----IS 57

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVD 150
            +  DVT+ +  R   D  I + G LDI+  N G      +  +E   +
Sbjct: 58  FVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNE 106

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 54.3 bits (130), Expect = 2e-09
 Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 2/103 (1%)

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA--GRSQRAAWEDIELEVDRELFELN 219
           I  +  DVT+ +  R   D  I + G LDI+  N     +   +  +   E  + + ++N
Sbjct: 56  ISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDIN 115

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           V+    +++ A    +  ++G  +   S  +   G   S  YT
Sbjct: 116 VYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT 158

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 88.6 bits (219), Expect = 1e-21
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 2/140 (1%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F NK + +TG + GIG A    ++  GA + +  RS+++   V                 
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV--GKEFGVKTKAY 64

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DV+ T    +    +    G +  LI NAG S      ++  E    ++         
Sbjct: 65  QCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 124

Query: 164 TLTLDVTQTKYHRRCFDAVI 183
           T           ++    V+
Sbjct: 125 TCRAVAKLWLQKQQKGSIVV 144

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 50.5 bits (120), Expect = 5e-08
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 7/113 (6%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
            +         DV+ T    +    +    G +  LI NAG S      ++  E    ++
Sbjct: 56  EFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVY 115

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTS-------SIAGIVGAPYSGSYT 262
           ++NVF V +  R     +L ++Q G +VVTS       + + + G+     Y 
Sbjct: 116 DVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN 168

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 2e-21
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           ++V ITGA  GIG   A + +K  +KLVL   +   LE     C   GA    ++T  +D
Sbjct: 8   EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA---KVHTFVVD 64

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
            +  +        V  + G + IL+NNAG    +     +     + F
Sbjct: 65  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTF 112

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 2e-14
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 1/105 (0%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
                ++T  +D +  +        V  + G + IL+NNAG    +     +     + F
Sbjct: 53  GLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTF 112

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           E+NV +    ++            GH+V  +S AG V  P+  +Y
Sbjct: 113 EVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGHVSVPFLLAY 156

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 2e-21
 Identities = 22/147 (14%), Positives = 53/147 (36%), Gaps = 3/147 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG--AHPQSIY 101
              +V  +TG ++GIG+A+  +L + G+ +V+++R    L+   +             + 
Sbjct: 10  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS 161
            +  ++   +       + +  FG ++ L+NN G    +  E I  +    +        
Sbjct: 70  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT-G 128

Query: 162 IYTLTLDVTQTKYHRRCFDAVIQQFGC 188
            + +   V  +         V      
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNIIVPT 155

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 87.6 bits (216), Expect = 3e-21
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           KV  +TGA  GIG+A+AL+L K G  + ++  + +  + V +   QAG H      + +D
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH---AVAVKVD 58

Query: 107 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 145
           V+         +   +  G  D+++NNAG +     E I
Sbjct: 59  VSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESI 97

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 37.5 bits (86), Expect = 8e-04
 Identities = 25/108 (23%), Positives = 44/108 (40%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
                   + +DV+         +   +  G  D+++NNAG +     E I  E+  +++
Sbjct: 47  QAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVY 106

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDH 264
            +NV  V+   + A   F     GG ++   S AG VG P    Y+  
Sbjct: 107 NINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSS 154

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 87.5 bits (216), Expect = 4e-21
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 4/117 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-LERVKNLCVQAGAHPQSIYT 102
              KVV ITG+S+G+G+++A++ +   AK+V++ RS  +    V     + G        
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE---AIA 61

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
           +  DVT          + I++FG LD++INNAG     +  ++ L    ++      
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLT 118

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 86.6 bits (214), Expect = 6e-21
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 12/145 (8%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F+     +TGA  GIG      L   GAK+V   R++S+L  +   C         I  +
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-------PGIEPV 55

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            +D+          +  +   G +D+L+NNA       + ++  E     F+   R S++
Sbjct: 56  CVDLGD----WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLR-SVF 110

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGC 188
            ++  V +   +R    +++     
Sbjct: 111 QVSQMVARDMINRGVPGSIVNVSSM 135

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.3 bits (151), Expect = 4e-12
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 4/103 (3%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
           P I  + +D+          +  +   G +D+L+NNA       + ++  E     F +N
Sbjct: 50  PGIEPVCVDLGD----WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVN 105

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           + SV  +S++     + R   G +V  SS+   V  P   +Y+
Sbjct: 106 LRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYS 148

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 86.2 bits (213), Expect = 9e-21
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 4/112 (3%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
                  +TG S GIG  +  +L+  GA +   +R+   L          G   ++    
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS--- 62

Query: 104 TLDVTQTKYHRRCFDAVIQQFGC-LDILINNAGRSQRAAWEDIELEVDRELF 154
             D++     +   + V   F   L+IL+NNAG       +D  +E    + 
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIM 114

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 55.8 bits (134), Expect = 8e-10
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 2/95 (2%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGC-LDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
               D++     +   + V   F   L+IL+NNAG       +D  +E    +  +N  +
Sbjct: 61  ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEA 120

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY 257
              LS +A  +  A E+G   V  SS++G +  PY
Sbjct: 121 AYHLSVLAHPFLKASERGNV-VFISSVSGALAVPY 154

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 86.6 bits (214), Expect = 1e-20
 Identities = 36/219 (16%), Positives = 63/219 (28%), Gaps = 65/219 (29%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
              + V ITG +SG+G AL  +    GAK+ +  +S+  L  ++        H  ++  +
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELET------DHGDNVLGI 56

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DV   +  ++     + +FG +D LI NAG    +       E   +           
Sbjct: 57  VGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLD----------- 105

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                          F                                      +NV   
Sbjct: 106 ---------AAFDEVFH-------------------------------------INVKGY 119

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           +   +            G+++ T S AG         YT
Sbjct: 120 IHAVKACLPAL--VASRGNVIFTISNAGFYPNGGGPLYT 156

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 86.3 bits (213), Expect = 1e-20
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 4/119 (3%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTL 105
           KV   TGA  GIG  +A++L + GA +V++  SSS   E V     + GA       +  
Sbjct: 7   KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---GVAIQA 63

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
           D+++       FD  +  FG LD +++N+G        ++  E+  ++F    R   + 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFV 122

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 85.9 bits (212), Expect = 1e-20
 Identities = 19/130 (14%), Positives = 39/130 (30%), Gaps = 10/130 (7%)

Query: 51  ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT 110
           +T      G   AL+LS+ G  +     S    + ++                 L     
Sbjct: 5   VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQ---------LKPMSE 55

Query: 111 KYHRRCFDAVIQQFGCLDILINNAGRSQR-AAWEDIELEVDRELFTYAYRPSIYTLTLDV 169
           +      +AV   +G +D+L++N   +      +   +E  R             +    
Sbjct: 56  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 115

Query: 170 TQTKYHRRCF 179
           +Q K  +   
Sbjct: 116 SQMKKRKSGH 125

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 48.1 bits (114), Expect = 3e-07
 Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR-AAWEDIELEVDRELFELNVFSVL 224
           L     +      +AV   +G +D+L++N   +      +   +E  R   E       
Sbjct: 50  LKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPF 108

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 85.1 bits (210), Expect = 2e-20
 Identities = 27/103 (26%), Positives = 37/103 (35%), Gaps = 3/103 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             NK V    A  GIG   + +L K   K  +      N   +  L  +A     +I   
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAEL--KAINPKVNITFH 60

Query: 104 TLDVTQ-TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 145
           T DVT      ++    +  Q   +DILIN AG       E  
Sbjct: 61  TYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERT 103

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 56.6 bits (136), Expect = 3e-10
 Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 11/120 (9%)

Query: 146 ELEVDRELFTYAYRPSIYTLTLDVTQ-TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW 204
                 EL     + +I   T DVT      ++    +  Q   +DILIN AG       
Sbjct: 41  NPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQI 100

Query: 205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ--GGHLVVTSSIAGIVGAPYSGSYT 262
           E            +N   +++ +     ++  R+   GG +    S+ G         Y+
Sbjct: 101 ERT--------IAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS 152

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 83.9 bits (207), Expect = 7e-20
 Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
           N  + K V ITG + G+G   A Q    GA++VL+                A     +  
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT------ARELGDAAR 54

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
              LDVT  +  +R      ++FG +D L+NNAG S     E   +E  R++ 
Sbjct: 55  YQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVV 107

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 56.1 bits (135), Expect = 5e-10
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 1/103 (0%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
           +     LDVT  +  +R      ++FG +D L+NNAG S     E   +E  R++ E+N+
Sbjct: 52  AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINL 111

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTD 263
             V    +           GG +V  SS AG++G   + SY  
Sbjct: 112 TGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGLALTSSYGA 153

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 83.6 bits (206), Expect = 1e-19
 Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 4/142 (2%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
                  +TG S GIG A+  +L+  GA++   +R+   L+    +  + G + +     
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS--- 60

Query: 104 TLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI 162
             D+       +    V   F G L+IL+NNAG       +D   +    +    +  + 
Sbjct: 61  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120

Query: 163 YTLTLDVTQTKYHRRCFDAVIQ 184
           +   +     K  +      + 
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLS 142

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 38.9 bits (90), Expect = 3e-04
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 2/95 (2%)

Query: 164 TLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRSQRAAWEDIELEVDRELFELNVFS 222
               D+       +    V   F G L+IL+NNAG       +D   +    +   N  +
Sbjct: 59  GSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEA 118

Query: 223 VLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY 257
              LS+IA     A +  G+++  SSIAG    P 
Sbjct: 119 AYHLSQIAYPLLKASQN-GNVIFLSSIAGFSALPS 152

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 82.9 bits (204), Expect = 2e-19
 Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
             KV  +TGA  GIG  +A++L + G K++++  +S+  E  + +      +      + 
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST--ESAEEVVAAIKKNGSDAACVK 74

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
            +V   +   R F+  ++ FG LDI+ +N+G       +D+  E    +FT   R   + 
Sbjct: 75  ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFV 134

Query: 165 LTLDVTQTKYHRRCF 179
                   +   R  
Sbjct: 135 AREAYKHLEIGGRLI 149

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 82.1 bits (202), Expect = 3e-19
 Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 6/120 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + K + +TGA+SGIG A     ++ GA LV   R    L           A       +
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEA------VAALEAEAIAV 56

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             DV+  K     F   +++FG L  + + AG +  A   ++ LE   ++       S  
Sbjct: 57  VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFL 116

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 37.8 bits (87), Expect = 7e-04
 Identities = 18/102 (17%), Positives = 37/102 (36%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
           A       +  DV+  K     F   +++FG L  + + AG +  A   ++ LE   ++ 
Sbjct: 48  ALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVL 107

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS 258
            +N+     ++R A                + +     A Y+
Sbjct: 108 RVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYA 149

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 6e-19
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 12/140 (8%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            + V +TGA  GIG      L   GA++V  +R+ ++L+ +   C         I  + +
Sbjct: 7   GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-------PGIEPVCV 59

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTL 165
           D+          +  +   G +D+L+NNA  +    + ++  E     F    R  I  +
Sbjct: 60  DLGD----WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQ-V 114

Query: 166 TLDVTQTKYHRRCFDAVIQQ 185
           +  V +    R    A++  
Sbjct: 115 SQIVARGLIARGVPGAIVNV 134

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 4e-09
 Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 4/103 (3%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
           P I  + +D+          +  +   G +D+L+NNA  +    + ++  E     FE+N
Sbjct: 52  PGIEPVCVDLGD----WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVN 107

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           + +V+ +S+I     +AR   G +V  SS            Y 
Sbjct: 108 LRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYC 150

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 81.4 bits (200), Expect = 7e-19
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            + K   ITG++ GIG A A    + GA++ ++  +             A     +   +
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARAT------AAEIGPAACAI 56

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
            LDVT      RC   ++ ++G +DIL+NNA     A   +I  E    LF
Sbjct: 57  ALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLF 107

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 43.6 bits (102), Expect = 9e-06
 Identities = 31/105 (29%), Positives = 48/105 (45%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
           P+   + LDVT      RC   ++ ++G +DIL+NNA     A   +I  E    LF +N
Sbjct: 51  PAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAIN 110

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDH 264
           V   L + +      +A  +GG ++  +S AG  G    G Y   
Sbjct: 111 VSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCAT 155

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 80.9 bits (199), Expect = 8e-19
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 10/112 (8%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAK-------LVLSARSSSNLERVKNLCVQAGAHPQS 99
            ++ ITGA  GIG A+AL+ ++           LVLS+R++++LE++   C   GA    
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL--- 58

Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
             T+T D++     RR    +++++G +D L+NNAG  +  A  D+  E   
Sbjct: 59  TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFD 110

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 81.0 bits (199), Expect = 9e-19
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 6/96 (6%)

Query: 39  KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQ 98
           K+ N    KV  +TGA   IG A AL+L++ G  + L   +   LE+ +    + G    
Sbjct: 1   KKFN---GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE-- 55

Query: 99  SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
              +   DVT  +      D+V++ FG +D L NNA
Sbjct: 56  -ARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNA 90

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 38.2 bits (88), Expect = 5e-04
 Identities = 26/103 (25%), Positives = 40/103 (38%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN 219
               +   DVT  +      D+V++ FG +D L NNAG     A        D       
Sbjct: 54  VEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTI 113

Query: 220 VFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             +       A S  +  +  G +V T+S+AG+ G P   +Y 
Sbjct: 114 NVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYG 156

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 80.6 bits (198), Expect = 2e-18
 Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 4/155 (2%)

Query: 32  FF--IEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNL 89
           FF  ++K     N F  KV +ITG  +G+G+ +   LS  GA+ V+++R    L+     
Sbjct: 9   FFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQ 68

Query: 90  CVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEV 149
              +      ++ +  DV      +     +I+  G  +I+INNA  +  +  E +    
Sbjct: 69  I--SSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNA 126

Query: 150 DRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQ 184
            + +       + +       Q    ++    +  
Sbjct: 127 WKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSI 161

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 15/112 (13%), Positives = 43/112 (38%)

Query: 146 ELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE 205
            L+   E  +      ++ +  DV      +     +I+  G  +I+INNA  +  +  E
Sbjct: 61  VLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTE 120

Query: 206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY 257
            +     + + ++ +     ++       +  ++G   +  ++I    G+ +
Sbjct: 121 RLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF 172

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 78.7 bits (193), Expect = 6e-18
 Identities = 42/207 (20%), Positives = 74/207 (35%), Gaps = 26/207 (12%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTL 103
             KV  +TG++SGIG  +A  L+  GA +VL+    +  +E+V+     A  H   +   
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGL--AAQHGVKVLYD 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
             D+++ +  R   D  ++Q G +DIL+NNAG    A  ED   E    +         +
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSV 223
                               Q FG +  + +  G                     + +  
Sbjct: 121 ---------GTAAALPHMKKQGFGRIINIASAHGLVAS--------------ANKSAYVA 157

Query: 224 LSLSRIATSYFLAREQGGHLVVTSSIA 250
                +  +   A E  G  +  ++I 
Sbjct: 158 AKHGVVGFTKVTALETAGQGITANAIC 184

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.8 bits (193), Expect = 7e-18
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 4/109 (3%)

Query: 47  KVVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            V  +TG + GIG A+   L +     +VL+AR  +  +         G  P+      L
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ---L 60

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           D+   +  R   D + +++G LD+L+NNAG + + A             
Sbjct: 61  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTM 109

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 8e-12
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 3/105 (2%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
           A   S     LD+   +  R   D + +++G LD+L+NNAG + + A             
Sbjct: 50  AEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTM 109

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSY 261
           + N F    +           +  G +V  SSI  +         
Sbjct: 110 KTNFFGTRDVCTELLPLI---KPQGRVVNVSSIMSVRALKSCSPE 151

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (193), Expect = 7e-18
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 8/114 (7%)

Query: 42  NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
             +  KVV +TG   GIG  +       GA++V+  +  S    ++     A        
Sbjct: 2   TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL---- 57

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELF 154
               DVTQ    +      I++FG LD ++NNAG        E+   +  R+L 
Sbjct: 58  ---CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLL 108

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (135), Expect = 5e-10
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA-WEDIELEVDRELFEL 218
           P    +  DVTQ    +      I++FG LD ++NNAG        E+   +  R+L EL
Sbjct: 51  PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLEL 110

Query: 219 NVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDH 264
           N+    +L+++A  Y   R+  G+++  SS+ G +G   +  Y   
Sbjct: 111 NLLGTYTLTKLALPYL--RKSQGNVINISSLVGAIGQAQAVPYVAT 154

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 76.2 bits (187), Expect = 3e-17
 Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 18/143 (12%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT 104
            +K V +  AS GIG A+A  LS+ GA++ + AR+   L+R  +  V             
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVC----------- 51

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
            D+ +        D + ++   +DIL+ NAG  +   ++++  E  +E     +   I  
Sbjct: 52  -DLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKI 104

Query: 165 LTLDVTQTKYHRRCFDAVIQQFG 187
           +   +   K         I  F 
Sbjct: 105 VRNYLPAMKEKGWGRIVAITSFS 127

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.3 bits (86), Expect = 9e-04
 Identities = 15/87 (17%), Positives = 36/87 (41%), Gaps = 1/87 (1%)

Query: 176 RRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFL 235
           R+  D + ++   +DIL+ NAG  +   ++++  E  +E  +    +++ + R       
Sbjct: 54  RKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMK 113

Query: 236 AREQGGHLVVTSSIAGIVGAPYSGSYT 262
            +  G   V  +S + I       +  
Sbjct: 114 EKGWGRI-VAITSFSVISPIENLYTSN 139

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.9 bits (186), Expect = 4e-17
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 14/102 (13%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F ++ V +TG + GIG A+A +L+  G K+ ++ R S   + +              + +
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL--------------FGV 50

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI 145
            +DVT +    R F AV +  G +++L++NAG S  A    +
Sbjct: 51  EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRM 92

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.8 bits (87), Expect = 7e-04
 Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 1/102 (0%)

Query: 161 SIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNV 220
            ++ + +DVT +    R F AV +  G +++L++NAG S  A    +  E   ++   N+
Sbjct: 46  GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANL 105

Query: 221 FSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
                +++ A+     R + G ++   S++G+ G     +Y 
Sbjct: 106 TGAFRVAQRASRSM-QRNKFGRMIFIGSVSGLWGIGNQANYA 146

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.3 bits (187), Expect = 4e-17
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 2/115 (1%)

Query: 40  RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
           R      K V +TGAS GIG  +A  L+K GA +V++ARS   L++V + C++ GA   S
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA--S 65

Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
            + +   +    +  +      +  G LD+LI N   +        ++   R+  
Sbjct: 66  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM 120

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.6 bits (185), Expect = 7e-17
 Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 9/118 (7%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKC---GAKLVLSARSSSNLERVKNLCVQAGAHPQSI 100
               V  +TGAS G G ALA QL++    G+ +++SARS S L ++K          + +
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK-V 62

Query: 101 YTLTLDVTQT----KYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 154
                D+       +      +    +     +LINNA      +   +    D    
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLN-VNDLAEV 119

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 75.7 bits (185), Expect = 7e-17
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 3/135 (2%)

Query: 48  VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL-ERVKNLCVQA--GAHPQSIYTLT 104
              ITG +  IG ++A++L + G ++V+  R S    +R+      A  G+       L+
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYT 164
           L  +         D   + FG  D+L+NNA           +                  
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 165 LTLDVTQTKYHRRCF 179
              +     +  R F
Sbjct: 123 FGSNAVAPLFLIRAF 137

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 74.1 bits (181), Expect = 3e-16
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 11/115 (9%)

Query: 45  NNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
           +   V +TGA+ GIG  L  QL K      ++ +AR       +K++          ++ 
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI------KDSRVHV 55

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGC--LDILINNAGRSQR-AAWEDIELEVDRELF 154
           L L VT  K        V +  G   L +LINNAG         +    V  E  
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQL 110

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 72.7 bits (178), Expect = 8e-16
 Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 42  NYFN--NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQS 99
            Y+   NKV  +TGA  GIG  +A  L+K  + ++  +R+  + + V +     G     
Sbjct: 4   YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE--- 60

Query: 100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELE 148
                 DV++ +      + ++ +   +DIL+NNAG ++   +  ++ +
Sbjct: 61  SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKND 109

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 18/106 (16%), Positives = 50/106 (47%), Gaps = 1/106 (0%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
           ++         DV++ +      + ++ +   +DIL+NNAG ++   +  ++ +   ++ 
Sbjct: 56  SFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVL 115

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
             N+ S+  +++  +   +   + G ++  SSI G+ G     +Y+
Sbjct: 116 RTNLNSLFYITQPISKRMINN-RYGRIINISSIVGLTGNVGQANYS 160

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (174), Expect = 3e-15
 Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 14/117 (11%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYT 102
            + KV+ +T A+ GIG+A AL  ++ GAK++ +  + S L+ + K   +Q      +   
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVT--- 60

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
                      ++  D    +   LD+L N AG        D E +          R
Sbjct: 61  ----------KKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVR 107

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 5e-07
 Identities = 19/88 (21%), Positives = 35/88 (39%)

Query: 175 HRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYF 234
            ++  D    +   LD+L N AG        D E +       LNV S+  + +      
Sbjct: 61  KKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKM 120

Query: 235 LAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           LA++ G  + ++S  + + G      Y+
Sbjct: 121 LAQKSGNIINMSSVASSVKGVVNRCVYS 148

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 67.9 bits (165), Expect = 4e-14
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 44  FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
           F  K+  +TGAS GIG A+A  L+  GAK++ +A S +  + + +          +   L
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL------GANGKGL 55

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW 142
            L+VT         + +  +FG +DIL+NNAG ++    
Sbjct: 56  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLL 94

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 40.5 bits (94), Expect = 8e-05
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 1/106 (0%)

Query: 157 AYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELF 216
               +   L L+VT         + +  +FG +DIL+NNAG ++      ++ E   ++ 
Sbjct: 47  YLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDII 106

Query: 217 ELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYT 262
           E N+ SV  LS+      + + + G ++   S+ G +G     +Y 
Sbjct: 107 ETNLSSVFRLSKAVMRAMMKK-RHGRIITIGSVVGTMGNGGQANYA 151

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 68.2 bits (165), Expect = 4e-14
 Identities = 26/173 (15%), Positives = 42/173 (24%), Gaps = 16/173 (9%)

Query: 48  VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER----------------VKNLCV 91
           V  +TGA+  +G ++A  L   G  + L    S+                    V+    
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 92  QAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
                P S    +  VT          A    +G  D+L+NNA           + +   
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 152 ELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW 204
                       T  L  +          A   +             S     
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 176

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 66.9 bits (162), Expect = 1e-13
 Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 21/114 (18%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
            ++ I+G ++GIG A    L   G ++V      +                     +  D
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIAD 41

Query: 107 VTQTKYHRRCF-DAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYR 159
           ++  +  ++   D + +    +D L+  AG   +       + V+    T    
Sbjct: 42  LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMD 95

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 66.3 bits (160), Expect = 2e-13
 Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 6/161 (3%)

Query: 46  NKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
            K   I G ++   I   +A      GA L  +  + S  +RV+ +         S Y  
Sbjct: 5   GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPI----AQELNSPYVY 60

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIY 163
            LDV++ ++ +  +++V +  G LD ++++   + + A E   LE  +  F  A   S+Y
Sbjct: 61  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120

Query: 164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW 204
           +L       K       +V+                   A 
Sbjct: 121 SLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAK 161

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 64.5 bits (156), Expect = 6e-13
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 44  FNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
            + K   + G ++   +G A+A +L + GA++ LS ++       + L    G       
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
               DVTQ +     F  V + FG LD L++    + R A E   ++  R
Sbjct: 66  ----DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRR 111

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 46.0 bits (108), Expect = 1e-06
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 10/124 (8%)

Query: 143 EDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA 202
           E +  E ++                   +       F  V + FG LD L++    + R 
Sbjct: 44  ERLRPEAEKLAEALGGALLFRADVTQDEELD---ALFAGVKEAFGGLDYLVHAIAFAPRE 100

Query: 203 AWEDIELEVDR----ELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYS 258
           A E   ++  R       E++ +S+++++R A        +GG +V  +  A     P  
Sbjct: 101 AMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLL---REGGGIVTLTYYASEKVVPKY 157

Query: 259 GSYT 262
               
Sbjct: 158 NVMA 161

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 62.4 bits (151), Expect = 3e-12
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            VV +TGAS GIG+A+AL L K G K++++ ARS+   E V       G       T   
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ---AITFGG 58

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE 143
           DV++           I  +G +D+++NNAG ++     
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLI 96

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 6e-12
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 3/84 (3%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE---RVKNLCVQAGAHPQSIYT 102
             VV ITG SSGIG  LA++L+   ++      +  +L+   R+          P S+ T
Sbjct: 2   RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGC 126
           L LDV  +K      + V +    
Sbjct: 62  LQLDVRDSKSVAAARERVTEGRVD 85

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 59.7 bits (143), Expect = 3e-11
 Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 9/101 (8%)

Query: 47  KVVWITGASSGIGEALA---LQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTL 103
             + ITG + G+G  L    L L +    L  + R+    + +++L      +  +I+ L
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA----KNHSNIHIL 58

Query: 104 TLDVTQTKYHRRCFDA--VIQQFGCLDILINNAGRSQRAAW 142
            +D+     + +       + +   L++L NNAG + ++A 
Sbjct: 59  EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSAR 99

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.4 bits (143), Expect = 3e-11
 Identities = 12/134 (8%), Positives = 32/134 (23%), Gaps = 12/134 (8%)

Query: 46  NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTL 105
            + V + G    +G             +       +       +     +  +    +T 
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTA 61

Query: 106 DVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVD-RELFTYAYRPSIYT 164
           +V +                 +D ++  AG       +   L  +   ++  +   S  +
Sbjct: 62  EVGKLL-----------GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 110

Query: 165 LTLDVTQTKYHRRC 178
             L     K     
Sbjct: 111 SHLATKHLKEGGLL 124

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 59.5 bits (143), Expect = 3e-11
 Identities = 17/157 (10%), Positives = 39/157 (24%), Gaps = 19/157 (12%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           V + G    +G A+     K G  ++    S+++      L        +   ++     
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQT- 63

Query: 109 QTKYHRRCFDAVIQQFGCLDILINN--AGRSQRAAWEDIELEVDRELFTYAYRPSIYTLT 166
                     A   Q   +D +           A+ +D     D  +    +  +I    
Sbjct: 64  ----------ASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI---- 109

Query: 167 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA 203
               +          ++Q  G    +           
Sbjct: 110 --AAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGM 144

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 59.0 bits (141), Expect = 6e-11
 Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 4/100 (4%)

Query: 45  NNKVVWITGA--SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYT 102
           + K + ++G    S I   +A    + GA+LVL+      L  ++ +  +  A    +  
Sbjct: 5   DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF--DRLRLIQRITDRLPAKAPLLEL 62

Query: 103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW 142
              +              I     LD ++++ G   +   
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGM 102

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 58.0 bits (139), Expect = 1e-10
 Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 6/93 (6%)

Query: 44  FNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIY 101
            + K + +TG +S   I   +A  + + GA+L  + ++     RV+    Q G+      
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 62

Query: 102 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINNA 134
               DV +       F  + + +   D  +++ 
Sbjct: 63  ----DVAEDASIDTMFAELGKVWPKFDGFVHSI 91

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 8e-10
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV 86
            V  ITG +SG+G A A +L   GA  VL    +S  E  
Sbjct: 5  GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ 45

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 55.4 bits (132), Expect = 1e-09
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 46 NKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQ 98
             V +TG + G+G  +A  L++ GA  L+L +RS  + +    L  +  A   
Sbjct: 9  TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA 62

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 54.3 bits (129), Expect = 1e-09
 Identities = 21/189 (11%), Positives = 49/189 (25%), Gaps = 5/189 (2%)

Query: 49  VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT 108
           V + G +  +G+ LAL+L+  G ++V+ +R     E       +                
Sbjct: 3   VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGM---KNE 59

Query: 109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLD 168
                       I     +D   +     +        + V R    + Y        + 
Sbjct: 60  DAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIV 119

Query: 169 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR--AAWEDIELEVDRELFELNVFSVLSL 226
               +  +               L              ++ +  V   + E++    L  
Sbjct: 120 AEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179

Query: 227 SRIATSYFL 235
             ++ S  +
Sbjct: 180 GPLSNSRLV 188

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 53.7 bits (128), Expect = 4e-09
 Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 18/111 (16%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLD 106
           +   +TG +SG+G A AL L   G ++V+        + +                +  D
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI---------------YVEGD 46

Query: 107 VTQTKYHRRCFDAVIQQ---FGCLDILINNAGRSQRAAWEDIELEVDRELF 154
           VT+ +  RR      ++   F  +                   LE  R + 
Sbjct: 47  VTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVL 97

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 40.6 bits (94), Expect = 8e-05
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 8/106 (7%)

Query: 165 LTLDVTQTKYHRRCFDAVIQQFG---CLDILINNAGRSQRAAWEDIELEVDRELFELNVF 221
           +  DVT+ +  RR      ++      +                   LE  R + E+N+ 
Sbjct: 43  VEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLL 102

Query: 222 SVLSLSRIATSYF-----LAREQGGHLVVTSSIAGIVGAPYSGSYT 262
              ++ R+A          A  Q G +V T+S+A   G     +Y 
Sbjct: 103 GTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYA 148

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 52.6 bits (124), Expect = 1e-08
 Identities = 16/125 (12%), Positives = 41/125 (32%), Gaps = 31/125 (24%)

Query: 45  NNKVVWITGA--SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNL------------- 89
           N  + +I G   ++G G  +A +LSK   K++           +KN              
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 90  ----------------CVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINN 133
                                   ++      ++ Q        + + Q++G +++L+++
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 134 AGRSQ 138
              ++
Sbjct: 121 LANAK 125

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 49.0 bits (115), Expect = 2e-07
 Identities = 18/151 (11%), Positives = 43/151 (28%), Gaps = 6/151 (3%)

Query: 44  FNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNL----CVQAGAHP 97
              K  +I G +   G G A+A  L+  GA++++     +      +L      Q+   P
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 98  QSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYA 157
                    V          + V +          ++  + + A E +  +         
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 158 YRPSIYTLTLDVTQTKYHRRCFDAVIQQFGC 188
              +   ++  + +T             +  
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSF 156

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 13/123 (10%), Positives = 29/123 (23%), Gaps = 16/123 (13%)

Query: 33  FIEKINKRLNY-FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCV 91
            +  + K        K   +   +  +G   A  L+  GA++VL  R     +   +   
Sbjct: 9   GVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVN 68

Query: 92  QAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDR 151
           +              V  T        +  +       +            E +     +
Sbjct: 69  KRF-----------KVNVTAAETADDASRAEAVKGAHFVFTAGA----IGLELLPQAAWQ 113

Query: 152 ELF 154
              
Sbjct: 114 NES 116

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 6/96 (6%), Positives = 17/96 (17%), Gaps = 7/96 (7%)

Query: 169 VTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSR 228
           V  T        +  +       +            E +     +    + + +  +   
Sbjct: 73  VNVTAAETADDASRAEAVKGAHFVFTAGA----IGLELLPQAAWQNESSIEIVADYNAQP 128

Query: 229 IATSYFLAREQGGHLVVTSSIAGIVG---APYSGSY 261
                 +     G         G +G          
Sbjct: 129 PLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHR 164

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 43.7 bits (101), Expect = 1e-05
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 37 INKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN 88
          IN   +++  K V++TG +   G  L+L L   GA +   + ++  +  +  
Sbjct: 1  INN--SFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE 50

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.3 bits (95), Expect = 6e-05
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNL 89
            +V +TGA+  +   +  QL + G K+  +ARS+S L  ++  
Sbjct: 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR 54

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.0 bits (87), Expect = 7e-04
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 35 EKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLV----LSARSSSNLERVKNL 89
          E++ K L     KV  ITG +  IG  L   L K   K+V     +     NL+ V++L
Sbjct: 6  EELRKELP-AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSL 63

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 2/74 (2%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSAR--SSSNLERVKNLCVQAGAHPQSIYTLT 104
           KV  ITG +   G  LA  L + G ++    R  SS N ERV ++           +   
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 105 LDVTQTKYHRRCFD 118
            D++ T    R   
Sbjct: 62  GDLSDTSNLTRILR 75

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (81), Expect = 0.004
 Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 3/103 (2%)

Query: 47  KVVWITGASSGIGEALALQLSKCGAKLVLSAR--SSSNLERVKNLCVQAGAHPQSIYTL- 103
            V  ITG +   G  LA  L + G ++    R  SS N  R+++L     AH +    L 
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 104 TLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE 146
             D+T +    +  + V           ++   S   A    +
Sbjct: 62  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTAD 104

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	265
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.98
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.98
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.98
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.98
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.97
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.97
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.97
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.97
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.97
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.97
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.97
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.97
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.97
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.97
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.97
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.97
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.96
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.96
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.96
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.96
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.96
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.96
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.95
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.95
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.95
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.95
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.93
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.92
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.92
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.91
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.91
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.89
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.88
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.86
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.86
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.84
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.83
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.74
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.58
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.17
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.11
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.04
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.03
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.98
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.97
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.95
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	98.93
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.93
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.9
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.87
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.82
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.8
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.79
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.78
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.74
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.69
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.62
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.58
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.58
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.53
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.5
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.45
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.34
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.18
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.14
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.07
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.05
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.05
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.03
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	97.95
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.9
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	97.85
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.83
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.75
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.74
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.71
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.7
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.62
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.62
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.61
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.6
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.55
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.53
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.51
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.49
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.49
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.46
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.46
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.45
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.44
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.43
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.38
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.36
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.35
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.3
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.3
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.29
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.29
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.28
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.28
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.25
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.24
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.2
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.15
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.14
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.13
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.1
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.09
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.09
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.08
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.07
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.03
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	97.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.95
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.93
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.93
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	96.85
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.82
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.79
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.76
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.76
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	96.75
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.73
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.72
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.71
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.71
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	96.7
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.69
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.63
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.52
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.51
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.49
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.46
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.45
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.44
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.43
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.42
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.41
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.39
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.38
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.35
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.35
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.34
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.33
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.3
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.28
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.28
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	96.25
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.23
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.18
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.18
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.16
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.16
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.09
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.02
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.02
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.98
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	95.97
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	95.92
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	95.88
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.83
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.82
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.79
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.78
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	95.78
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.73
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	95.69
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.67
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	95.66
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	95.52
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.5
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.5
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.47
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.44
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	95.4
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	95.4
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.37
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	95.35
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.23
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.2
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.2
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.17
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	94.98
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.94
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.92
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	94.91
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	94.84
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.72
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	94.57
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	94.41
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	94.35
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	94.33
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.12
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	93.88
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	93.86
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	93.78
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.76
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.73
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	93.68
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.62
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	93.46
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.27
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.22
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.18
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.07
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	92.77
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	92.48
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.48
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	92.48
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.43
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.35
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.3
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	92.17
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	92.13
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	92.11
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.1
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.1
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.04
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	91.93
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	91.86
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	91.79
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	91.58
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	91.57
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.35
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	91.35
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.34
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	91.25
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	90.52
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	90.34
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.18
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.87
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	89.87
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	89.74
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	89.64
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	89.43
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	89.33
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	89.2
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.05
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	89.02
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	89.0
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	88.92
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	88.59
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	88.47
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	88.46
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	88.32
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	88.23
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	88.19
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	87.77
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	87.71
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	87.68
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	87.37
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.22
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	87.2
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	87.15
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	87.02
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	86.99
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	86.99
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	86.89
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	86.65
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.63
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	86.62
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	86.53
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	86.48
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	86.4
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	86.34
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.23
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	86.2
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	86.07
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	85.92
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	85.82
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.74
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	85.66
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	85.53
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	85.48
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	85.48
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.93
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	84.83
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	84.64
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	84.25
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	84.0
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	83.53
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.32
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	83.3
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	83.02
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	82.43
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	82.41
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	82.4
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	82.26
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	82.12
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	81.71
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	81.69
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	81.27
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	81.24

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-36  Score=256.20  Aligned_cols=159  Identities=26%  Similarity=0.337  Sum_probs=141.2

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..++.||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+   .++.++.||++|+++++++    
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~---~~~~~~~~Dvs~~~~v~~~----   74 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG---AKVHTFVVDCSNREDIYSS----   74 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH----
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHH----
Confidence            467999999999999999999999999999999999999999999988887654   5788888888888888888    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||||...
T Consensus        75 ----------------------------------------------------------~~~i~~~~g~idilinnag~~~   96 (244)
T d1yb1a_          75 ----------------------------------------------------------AKKVKAEIGDVSILVNNAGVVY   96 (244)
T ss_dssp             ----------------------------------------------------------HHHHHHHTCCCSEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCceeEeeccccc
Confidence                                                                      6666666777777777777777


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++.+.++++|++++++|++|+++++++++|+|++++ .|+||++||.++..+.|++++|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asK  160 (244)
T d1yb1a_          97 TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSK  160 (244)
T ss_dssp             CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCCCcHHHHHHH
Confidence            77888899999999999999999999999999999886 79999999999999999999999987

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.6e-35  Score=255.09  Aligned_cols=160  Identities=21%  Similarity=0.304  Sum_probs=142.8

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .++.++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.++++|++|+++++++   
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g---~~~~~~~~Dvt~~~~v~~~---   77 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG---YESSGYAGDVSKKEEISEV---   77 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT---CCEEEEECCTTCHHHHHHH---
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHH---
Confidence            3578899999999999999999999999999999999999999988888876543   5677777787777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|+||||||..
T Consensus        78 -----------------------------------------------------------~~~~~~~~g~iDilvnnag~~   98 (251)
T d2c07a1          78 -----------------------------------------------------------INKILTEHKNVDILVNNAGIT   98 (251)
T ss_dssp             -----------------------------------------------------------HHHHHHHCSCCCEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHhcCCceeeeeccccc
Confidence                                                                       777777778888888888887


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||+++..+.|+.++|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~asK  163 (251)
T d2c07a1          99 RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSK  163 (251)
T ss_dssp             CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             cccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCCCCHHHHHHH
Confidence            788889999999999999999999999999999999886 79999999999999999999999987

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=3.7e-35  Score=252.85  Aligned_cols=158  Identities=29%  Similarity=0.410  Sum_probs=137.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +.|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.    .+.++.++++|++|+++++++     
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~-----   72 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG----TPDQIQFFQHDSSDEDGWTKL-----   72 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----CTTTEEEEECCTTCHHHHHHH-----
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----CCCcEEEEEccCCCHHHHHHH-----
Confidence            35899999999999999999999999999999999999887777666542    234677777777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||....
T Consensus        73 ---------------------------------------------------------~~~~~~~~G~iDiLVnnAg~~~~   95 (251)
T d1zk4a1          73 ---------------------------------------------------------FDATEKAFGPVSTLVNNAGIAVN   95 (251)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSSCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHhCCceEEEeccccccc
Confidence                                                                     77777777777777777777778


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++.++++++|++++++|+.++++++|+++|+|++++.+|+||++||.++..+.|+.++|++||
T Consensus        96 ~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asK  159 (251)
T d1zk4a1          96 KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHH
Confidence            8899999999999999999999999999999999887557999999999999999999999987

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=4.8e-35  Score=253.14  Aligned_cols=159  Identities=28%  Similarity=0.356  Sum_probs=136.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.. .+.++.+++||++|+++++++      
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~-~~~~~~~~~~Dvt~~~~v~~~------   73 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-PDAEVLTTVADVSDEAQVEAY------   73 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-TTCCEEEEECCTTSHHHHHHH------
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCCeEEEEeccCCCHHHHHHH------
Confidence            3789999999999999999999999999999999999999988888776654 234677777788877777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-cc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-QR  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-~~  201 (265)
                                                                              ++++.+++|++|+||||||+. ..
T Consensus        74 --------------------------------------------------------~~~~~~~~G~iDiLVnnAG~~~~~   97 (258)
T d1iy8a_          74 --------------------------------------------------------VTATTERFGRIDGFFNNAGIEGKQ   97 (258)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCSEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHhCCCCEEEECCcccccC
Confidence                                                                    666666666666666666654 34


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++++++++++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..+.|+.++|++||
T Consensus        98 ~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asK  160 (258)
T d1iy8a_          98 NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAAAK  160 (258)
T ss_dssp             BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             CchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCCCCchHHHHHH
Confidence            6788999999999999999999999999999999876 89999999999999999999999987

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-35  Score=253.08  Aligned_cols=154  Identities=27%  Similarity=0.406  Sum_probs=136.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.      .+...+.+|++|+++++++      
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~------~~~~~~~~Dv~~~~~v~~~------   68 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG------ANGKGLMLNVTDPASIESV------   68 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG------GGEEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC------CCCcEEEEEecCHHHhhhh------
Confidence            5899999999999999999999999999999999999888777666542      3566677777777777766      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|+||||||....+
T Consensus        69 --------------------------------------------------------~~~~~~~~g~iDilVnnAg~~~~~   92 (243)
T d1q7ba_          69 --------------------------------------------------------LEKIRAEFGEVDILVNNAGITRDN   92 (243)
T ss_dssp             --------------------------------------------------------HHHHHHHTCSCSEEEECCCCCCCC
T ss_pred             --------------------------------------------------------hhhhhcccCCcceehhhhhhcccc
Confidence                                                                    777777777888888888888888


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..+.|+.++|++||
T Consensus        93 ~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asK  154 (243)
T d1q7ba_          93 LLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNGGQANYAAAK  154 (243)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             ccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCCCCHHHHHHH
Confidence            899999999999999999999999999999999886 79999999999999999999999987

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=3.2e-35  Score=254.36  Aligned_cols=157  Identities=26%  Similarity=0.356  Sum_probs=135.3

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      |+||++|||||++|||+++|++|+++|++|++++|++ +.++++.+++.+..  +.++.++++|++|+++++++      
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~------   73 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--GVKVLYDGADLSKGEAVRGL------   73 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH--TSCEEEECCCTTSHHHHHHH------
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHH------
Confidence            6899999999999999999999999999999999975 55666666655433  24666677777777776666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|+||||||+...+
T Consensus        74 --------------------------------------------------------~~~~~~~~G~iDiLVnnAG~~~~~   97 (260)
T d1x1ta1          74 --------------------------------------------------------VDNAVRQMGRIDILVNNAGIQHTA   97 (260)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCSEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHhCCCcEEEeecccccCC
Confidence                                                                    777777777777777777777788


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++++.+.++|+++|++|+.++++++|+++|+|++++ .|+||++||.++..+.|++++|++||
T Consensus        98 ~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1x1ta1          98 LIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             chhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccCCcchhhhhh
Confidence            899999999999999999999999999999999886 79999999999999999999999987

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=5.1e-35  Score=253.05  Aligned_cols=159  Identities=24%  Similarity=0.343  Sum_probs=141.7

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+   .+..++++|++|+++++++    
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g---~~~~~~~~Dv~~~~~v~~~----   75 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG---FKVEASVCDLSSRSERQEL----   75 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHH----
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CCceEEEeeCCCHHHHHHH----
Confidence            578999999999999999999999999999999999999999988888877654   5777788888888877777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc-cccEEEeccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG-CLDILINNAGRS  199 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g-~ldilVnnAG~~  199 (265)
                                                                                ++++.++++ ++|++|||||+.
T Consensus        76 ----------------------------------------------------------~~~~~~~~~~~idilvnnAG~~   97 (259)
T d2ae2a_          76 ----------------------------------------------------------MNTVANHFHGKLNILVNNAGIV   97 (259)
T ss_dssp             ----------------------------------------------------------HHHHHHHTTTCCCEEEECCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHhCCCceEEEECCcee
Confidence                                                                      666666665 677777777777


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..+.|+.+.|++||
T Consensus        98 ~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asK  162 (259)
T d2ae2a_          98 IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATK  162 (259)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             ccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccccccccccchHHHH
Confidence            778899999999999999999999999999999999876 79999999999999999999999987

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.8e-35  Score=252.17  Aligned_cols=159  Identities=23%  Similarity=0.346  Sum_probs=136.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+..  +.++.++++|++|+++++++     
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~--g~~~~~~~~Dv~~~~~v~~~-----   73 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY--GVETMAFRCDVSNYEEVKKL-----   73 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTCHHHHHHH-----
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh--CCcEEEEEccCCCHHHHHHH-----
Confidence            57899999999999999999999999999999999999988888777665433  25677777777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||+...
T Consensus        74 ---------------------------------------------------------~~~~~~~~g~iDiLVnnAG~~~~   96 (251)
T d1vl8a_          74 ---------------------------------------------------------LEAVKEKFGKLDTVVNAAGINRR   96 (251)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCC
Confidence                                                                     66677777777777777777777


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc-ccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG-IVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag-~~~~~~~~~Y~asK  265 (265)
                      +++.+++.++|++++++|+.|+++++|+++|+|++++ .|+||+++|..+ ..+.+++++|++||
T Consensus        97 ~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~~~~~~~Y~asK  160 (251)
T d1vl8a_          97 HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYAASK  160 (251)
T ss_dssp             CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred             CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccccCccccchHHHH
Confidence            8899999999999999999999999999999999876 799999999866 45778889999987

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=9e-35  Score=249.86  Aligned_cols=155  Identities=23%  Similarity=0.303  Sum_probs=133.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|+||+++||||++|||+++|++|+++|++|++++|+++.  ++.+.+++.+   .++.++++|++|+++++++      
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g---~~~~~~~~Dvs~~~~v~~~------   70 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLG---RRVLTVKCDVSQPGDVEAF------   70 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTT---CCEEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcC---CcEEEEEeeCCCHHHHHHH------
Confidence            4889999999999999999999999999999999998753  3334444443   5677777777777777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|+||||||+....
T Consensus        71 --------------------------------------------------------~~~~~~~~G~iDilVnnAG~~~~~   94 (247)
T d2ew8a1          71 --------------------------------------------------------GKQVISTFGRCDILVNNAGIYPLI   94 (247)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHcCCCCEEEECCCCCCCC
Confidence                                                                    666667777777777777777778


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.++++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..+.|+.++|++||
T Consensus        95 ~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asK  156 (247)
T d2ew8a1          95 PFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTK  156 (247)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHHH
T ss_pred             ChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCcccccchhhh
Confidence            899999999999999999999999999999999886 79999999999999999999999987

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=9.5e-35  Score=251.66  Aligned_cols=159  Identities=26%  Similarity=0.361  Sum_probs=137.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ++|+||+++||||++|||+++|++|+++|++|++++|+.+ .++++.+++++.+   .++.++++|++|+++++++    
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g---~~~~~~~~Dvt~~~~v~~~----   75 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG---GEAIAVKGDVTVESDVINL----   75 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHH----
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHH----
Confidence            3699999999999999999999999999999999999864 5666777666554   5677777888887777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|+||||||...
T Consensus        76 ----------------------------------------------------------~~~~~~~~G~iDiLVnnAG~~~   97 (261)
T d1geea_          76 ----------------------------------------------------------VQSAIKEFGKLDVMINNAGLEN   97 (261)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSCCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHhCCCCEeeccceecC
Confidence                                                                      6666666677777777777777


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.++.+.+.++|++++++|+.|+++++|+++|+|++++.+++||++||.++..+.|++++|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asK  162 (261)
T d1geea_          98 PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK  162 (261)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCC
Confidence            78889999999999999999999999999999999887567899999999999999999999987

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.3e-35  Score=250.89  Aligned_cols=157  Identities=28%  Similarity=0.405  Sum_probs=136.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.++++|++|+++++++     
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g---~~~~~~~~Dvs~~~~~~~~-----   78 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDITSEQELSAL-----   78 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH-----
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC---CcEEEEEccCCCHHHHHHH-----
Confidence            35799999999999999999999999999999999999999999888887754   5778888888888888888     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||+..+
T Consensus        79 ---------------------------------------------------------~~~~~~~~g~iDilvnnAG~~~~  101 (255)
T d1fmca_          79 ---------------------------------------------------------ADFAISKLGKVDILVNNAGGGGP  101 (255)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSSCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEeeeCCcCCCC
Confidence                                                                     55555556666666666666555


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++ +.+.++|++++++|+.|+++++|+++|+|++++ +|+||++||.++..+.|++++|++||
T Consensus       102 ~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~~~~~Y~asK  163 (255)
T d1fmca_         102 KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_dssp             CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccccccccchhHH
Confidence            555 688999999999999999999999999999887 79999999999999999999999987

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=4.9e-35  Score=252.51  Aligned_cols=155  Identities=28%  Similarity=0.331  Sum_probs=134.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ++|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++      +.++.++++|++++++++++     
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~-----   69 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQHLDVTIEEDWQRV-----   69 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------GGGEEEEECCTTCHHHHHHH-----
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------CCceEEEEcccCCHHHHHHH-----
Confidence            5799999999999999999999999999999999999887666554432      24566777777777777666     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||+...
T Consensus        70 ---------------------------------------------------------~~~~~~~~g~iDilVnnAg~~~~   92 (254)
T d1hdca_          70 ---------------------------------------------------------VAYAREEFGSVDGLVNNAGISTG   92 (254)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCccEEEecCccccc
Confidence                                                                     77777777777777777777777


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..+.|+.++|++||
T Consensus        93 ~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asK  155 (254)
T d1hdca_          93 MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASK  155 (254)
T ss_dssp             SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccccchhhHHHHH
Confidence            8899999999999999999999999999999999886 89999999999999999999999987

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=5.6e-35  Score=252.90  Aligned_cols=157  Identities=28%  Similarity=0.405  Sum_probs=137.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.+++||++|+++++++      
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g---~~~~~~~~Dv~~~~~v~~~------   72 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG---VEARSYVCDVTSEEAVIGT------   72 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHH------
Confidence            4789999999999999999999999999999999999998888888776543   5677788888888877777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-c
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-R  201 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~  201 (265)
                                                                              ++++.+++|++|+||||||... .
T Consensus        73 --------------------------------------------------------~~~~~~~~g~iDilVnnaG~~~~~   96 (260)
T d1zema1          73 --------------------------------------------------------VDSVVRDFGKIDFLFNNAGYQGAF   96 (260)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHhCCCCeehhhhcccccc
Confidence                                                                    6666666666777777777653 4


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++++++.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..+.|++++|++||
T Consensus        97 ~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1zema1          97 APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSK  159 (260)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCCcchHHHHHHH
Confidence            6789999999999999999999999999999999876 89999999999999999999999987

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8.2e-35  Score=251.80  Aligned_cols=160  Identities=27%  Similarity=0.320  Sum_probs=126.4

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ++|+|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+   .++.++.||++++++++++   
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~---   75 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG---FQVTGSVCDASLRPEREKL---   75 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHH---
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEeccCCCHHHHHHH---
Confidence            4688999999999999999999999999999999999999999988888776543   4677777787777777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc-ccccEEEecccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGR  198 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~-g~ldilVnnAG~  198 (265)
                                                                                 ++++.+++ |++|+||||||.
T Consensus        76 -----------------------------------------------------------~~~~~~~~~g~idilvnnAG~   96 (259)
T d1xq1a_          76 -----------------------------------------------------------MQTVSSMFGGKLDILINNLGA   96 (259)
T ss_dssp             -----------------------------------------------------------HHHHHHHHTTCCSEEEEECCC
T ss_pred             -----------------------------------------------------------HHHHHHHhCCCcccccccccc
Confidence                                                                       66666666 567777777777


Q ss_pred             cccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..+.++.++|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asK  162 (259)
T d1xq1a_          97 IRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSATK  162 (259)
T ss_dssp             ------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHHHHHH
T ss_pred             cCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccccccccccccccc
Confidence            7778899999999999999999999999999999999876 79999999999999999999999987

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.6e-34  Score=249.39  Aligned_cols=154  Identities=28%  Similarity=0.416  Sum_probs=137.8

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.+++||++|+++++++          
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g---~~~~~~~~Dv~~~~~v~~~----------   68 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG---GHAVAVKVDVSDRDQVFAA----------   68 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHH----------
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHH----------
Confidence            789999999999999999999999999999999999999888887654   5677788888888887777          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++++.+++|++|+||||||+...+++.+
T Consensus        69 ----------------------------------------------------~~~~~~~~g~iDilVnnAG~~~~~~~~~   96 (255)
T d1gega_          69 ----------------------------------------------------VEQARKTLGGFDVIVNNAGVAPSTPIES   96 (255)
T ss_dssp             ----------------------------------------------------HHHHHHHTTCCCEEEECCCCCCCBCGGG
T ss_pred             ----------------------------------------------------HHHHHHHhCCccEEEecccccccCcHHH
Confidence                                                                6777777777777777777777788999


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++++|++++++|+.|+++++|+++|+|.+++.+|+|+++||.++..+.|+++.|++||
T Consensus        97 ~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  155 (255)
T d1gega_          97 ITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSK  155 (255)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             hhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCH
Confidence            99999999999999999999999999988877678999999999999999999999987

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.1e-34  Score=248.82  Aligned_cols=154  Identities=24%  Similarity=0.332  Sum_probs=134.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++   +   .+..++++|++|+++++++      
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~v~~~------   70 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---A---DAARYVHLDVTQPAQWKAA------   70 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---G---GGEEEEECCTTCHHHHHHH------
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---h---CcceEEEeecCCHHHHHHH------
Confidence            588999999999999999999999999999999999987776665543   2   4566677777777777776      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|+||||||.....
T Consensus        71 --------------------------------------------------------~~~~~~~~g~idilinnAG~~~~~   94 (244)
T d1nffa_          71 --------------------------------------------------------VDTAVTAFGGLHVLVNNAGILNIG   94 (244)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCB
T ss_pred             --------------------------------------------------------HHHHHHHhCCCeEEEECCcccCCC
Confidence                                                                    777777777777777777777788


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++++++.++|++++++|+.|+++++|++.|+|++++ .|+||++||.++..+.|+.++|++||
T Consensus        95 ~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asK  156 (244)
T d1nffa_          95 TIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATK  156 (244)
T ss_dssp             CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             chhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccccccccccchhhHH
Confidence            899999999999999999999999999999999886 79999999999999999999999987

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.7e-34  Score=249.40  Aligned_cols=155  Identities=28%  Similarity=0.372  Sum_probs=136.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.++++|++|+++++++        
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g---~~~~~~~~Dvs~~~~v~~~--------   69 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG---VEADGRTCDVRSVPEIEAL--------   69 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH--------
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeecCCHHHHHHH--------
Confidence            48999999999999999999999999999999999999999888887654   5677888888888887777        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++++.+++|++|+||||||+....++
T Consensus        70 ------------------------------------------------------~~~~~~~~g~iDilVnnAG~~~~~~~   95 (257)
T d2rhca1          70 ------------------------------------------------------VAAVVERYGPVDVLVNNAGRPGGGAT   95 (257)
T ss_dssp             ------------------------------------------------------HHHHHHHTCSCSEEEECCCCCCCSCG
T ss_pred             ------------------------------------------------------HHHHHHHhCCCCEEEecccccCCCCh
Confidence                                                                  66677777777777777777777889


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHh--hhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYF--LAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l--~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.+.++|++++++|+.|+++++|+++|+|  .+++ .|+||+++|.++..+.|++++|++||
T Consensus        96 ~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~~~~~~Y~asK  157 (257)
T d2rhca1          96 AELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSASK  157 (257)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             HHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-CcccccccccccccccccchhHHHHH
Confidence            999999999999999999999999999974  4444 69999999999999999999999987

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.7e-34  Score=247.06  Aligned_cols=153  Identities=27%  Similarity=0.417  Sum_probs=136.2

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCe-------EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAK-------LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +++|||||++|||+++|++|+++|++       |++++|+++.++++.+++.+.+   .++.+++||++|+++++++   
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g---~~~~~~~~Dvt~~~~v~~~---   75 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG---ALTDTITADISDMADVRRL---   75 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT---CEEEEEECCTTSHHHHHHH---
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHH---
Confidence            57899999999999999999999998       8999999998888888776543   5777778888887777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|+||||||..
T Consensus        76 -----------------------------------------------------------~~~~~~~~g~iDilvnnAg~~   96 (240)
T d2bd0a1          76 -----------------------------------------------------------TTHIVERYGHIDCLVNNAGVG   96 (240)
T ss_dssp             -----------------------------------------------------------HHHHHHHTSCCSEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHcCCcceeecccccc
Confidence                                                                       777777777788888888888


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..+++.+.++++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..+.|+++.|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asK  161 (240)
T d2bd0a1          97 RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYCMSK  161 (240)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCCCChHHHHHH
Confidence            888999999999999999999999999999999999876 79999999999999999999999987

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.5e-34  Score=247.21  Aligned_cols=151  Identities=23%  Similarity=0.341  Sum_probs=128.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      -|+||++|||||++|||+++|++|+++|++|++++|+++..+.. +   +.     ...++++|++|+++++++      
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~-~---~~-----~~~~~~~Dv~~~~~v~~~------   66 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-E---AI-----GGAFFQVDLEDERERVRF------   66 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHH-H---HH-----TCEEEECCTTCHHHHHHH------
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-H---Hc-----CCeEEEEeCCCHHHHHHH------
Confidence            37899999999999999999999999999999999987654322 2   22     233566777777666666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|+||||||+..++
T Consensus        67 --------------------------------------------------------~~~~~~~~G~iDiLVnnAG~~~~~   90 (248)
T d2d1ya1          67 --------------------------------------------------------VEEAAYALGRVDVLVNNAAIAAPG   90 (248)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCB
T ss_pred             --------------------------------------------------------HHHHHHhcCCCCeEEEeCcCCCCC
Confidence                                                                    777777777777777777777788


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..+.|+.++|++||
T Consensus        91 ~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asK  152 (248)
T d2d1ya1          91 SALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASK  152 (248)
T ss_dssp             CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccccccccchhHHHH
Confidence            899999999999999999999999999999999876 79999999999999999999999987

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=2.6e-34  Score=248.11  Aligned_cols=155  Identities=27%  Similarity=0.419  Sum_probs=134.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++   +   .++.++++|++|+++++++      
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~---~~~~~~~~Dvt~~~~v~~~------   69 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---G---PAACAIALDVTDQASIDRC------   69 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---C---TTEEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---C---CceEEEEeeCCCHHHHHHH------
Confidence            378999999999999999999999999999999999887776665543   2   4677777788777777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|+||||||+...+
T Consensus        70 --------------------------------------------------------~~~~~~~~g~iDilVnnAg~~~~~   93 (256)
T d1k2wa_          70 --------------------------------------------------------VAELLDRWGSIDILVNNAALFDLA   93 (256)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHHhCCccEEEeeccccccc
Confidence                                                                    667777777777777777777778


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++.+++|+.|+++++|+++|.|.+++.+|+||++||.++..+.|++++|++||
T Consensus        94 ~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  156 (256)
T d1k2wa_          94 PIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK  156 (256)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             ccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence            899999999999999999999999999999987766579999999999999999999999987

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=4.2e-34  Score=246.50  Aligned_cols=154  Identities=23%  Similarity=0.288  Sum_probs=133.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +.|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++   +   .+..++++|++|+++++++     
T Consensus         2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~~~~~-----   70 (253)
T d1hxha_           2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G---ERSMFVRHDVSSEADWTLV-----   70 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C---TTEEEECCCTTCHHHHHHH-----
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---C---CCeEEEEeecCCHHHHHHH-----
Confidence            4589999999999999999999999999999999999888777766554   2   4667777787777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||...+
T Consensus        71 ---------------------------------------------------------~~~~~~~~g~iDilVnnAG~~~~   93 (253)
T d1hxha_          71 ---------------------------------------------------------MAAVQRRLGTLNVLVNNAGILLP   93 (253)
T ss_dssp             ---------------------------------------------------------HHHHHHHHCSCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHhCCCCeEEecccccCC
Confidence                                                                     66666677777777777777777


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +++.+.+.++|++++++|+.++++++|+++|+|+++  +|+||++||.++..+.|++++|++||
T Consensus        94 ~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~~~~~~~~~~~~Y~asK  155 (253)
T d1hxha_          94 GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASVSSWLPIEQYAGYSASK  155 (253)
T ss_dssp             BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccchhhhcCccccccccchh
Confidence            889999999999999999999999999999999754  59999999999999999999999987

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6.3e-34  Score=244.13  Aligned_cols=153  Identities=27%  Similarity=0.428  Sum_probs=134.3

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEe-cCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSA-RSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +++|||||++|||+++|++|+++|++|++.+ |+++.++++.+++++.+   .++.++++|++|+++++++         
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g---~~~~~~~~Dv~~~~~v~~~---------   69 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG---GQAITFGGDVSKEADVEAM---------   69 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT---CEEEEEECCTTSHHHHHHH---------
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC---CcEEEEeCCCCCHHHHHHH---------
Confidence            5899999999999999999999999999875 55667777777777654   5677777888877777777         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.+++|++|+||||||.....++.
T Consensus        70 -----------------------------------------------------~~~~~~~~g~iDiLVnnAg~~~~~~~~   96 (244)
T d1edoa_          70 -----------------------------------------------------MKTAIDAWGTIDVVVNNAGITRDTLLI   96 (244)
T ss_dssp             -----------------------------------------------------HHHHHHHSSCCSEEEECCCCCCCCCGG
T ss_pred             -----------------------------------------------------HHHHHHHcCCCCccccccccccccchh
Confidence                                                                 777777777788888888887788899


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|++++++|+.|+++++|+++|+|++++ +|+|||+||.++..+.|+.++|++||
T Consensus        97 ~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~asK  155 (244)
T d1edoa_          97 RMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAK  155 (244)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             ccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCCCCHHHHHHH
Confidence            999999999999999999999999999999876 89999999999999999999999987

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.2e-33  Score=241.35  Aligned_cols=148  Identities=24%  Similarity=0.378  Sum_probs=120.4

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +..|+||++|||||++|||+++|++|+++|++|++++|+++.+              .++..+++|++|+++++++    
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------------~~~~~~~~Dv~~~~~v~~~----   63 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP--------------KGLFGVEVDVTDSDAVDRA----   63 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------------TTSEEEECCTTCHHHHHHH----
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh--------------cCceEEEEecCCHHHHHHH----
Confidence            3568999999999999999999999999999999999987653              2445567777777766666    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|+||||||...
T Consensus        64 ----------------------------------------------------------~~~~~~~~g~iDiLVnnAG~~~   85 (237)
T d1uzma1          64 ----------------------------------------------------------FTAVEEHQGPVEVLVSNAGLSA   85 (237)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSSCSEEEEECSCCC
T ss_pred             ----------------------------------------------------------HHHHHHhcCCceEEEeeecccc
Confidence                                                                      7777777777777777777777


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..+.++.++|++||
T Consensus        86 ~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asK  149 (237)
T d1uzma1          86 DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASK  149 (237)
T ss_dssp             -----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHHH
T ss_pred             cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCcccHHHHHHH
Confidence            78899999999999999999999999999999999886 79999999999999999999999987

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-33  Score=243.67  Aligned_cols=153  Identities=26%  Similarity=0.422  Sum_probs=129.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +.|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++       .+..+++||++|+++++++     
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-------~~~~~~~~Dvs~~~~v~~~-----   69 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-------PGAVFILCDVTQEDDVKTL-----   69 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------TTEEEEECCTTSHHHHHHH-----
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-------CCCeEEEccCCCHHHHHHH-----
Confidence            3578999999999999999999999999999999999887776655432       3466777777777777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-c
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-Q  200 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-~  200 (265)
                                                                               ++++.+++|++|+||||||.. .
T Consensus        70 ---------------------------------------------------------~~~~~~~~g~iDilVnnAG~~~~   92 (250)
T d1ydea1          70 ---------------------------------------------------------VSETIRRFGRLDCVVNNAGHHPP   92 (250)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHhcCCCCEEEeccccccc
Confidence                                                                     666666666677777777654 3


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..++++.+.++|++++++|+.|+++++|+++|+|+++  +|+||++||.++..+.|+.++|++||
T Consensus        93 ~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~~~~~~~~~~Y~asK  155 (250)
T d1ydea1          93 PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYVATK  155 (250)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             ccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccccccccccCcchhHHHH
Confidence            4668889999999999999999999999999999865  49999999999999999999999987

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.2e-33  Score=242.82  Aligned_cols=160  Identities=29%  Similarity=0.432  Sum_probs=136.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+....++.++.+|++|+++++++++.+.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999988776667888899999999988888555544


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc--
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ--  200 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~--  200 (265)
                      +                                                              +|++|+||||||...  
T Consensus        81 ~--------------------------------------------------------------~G~iDilVnnAG~~~~~   98 (274)
T d1xhla_          81 K--------------------------------------------------------------FGKIDILVNNAGANLAD   98 (274)
T ss_dssp             H--------------------------------------------------------------HSCCCEEEECCCCCCCC
T ss_pred             H--------------------------------------------------------------cCCceEEEeeccccccc
Confidence            4                                                              455555555555432  


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..+..+.+.++|++++++|+.++++++|+++|+|++++ +|+|+++||.++..+.|++++|++||
T Consensus        99 ~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~~~~~~~Y~asK  162 (274)
T d1xhla_          99 GTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAK  162 (274)
T ss_dssp             SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHHHH
T ss_pred             ccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhccccCCCCceehhhh
Confidence            23456678899999999999999999999999998876 78999999999999999999999987

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.8e-33  Score=243.59  Aligned_cols=159  Identities=29%  Similarity=0.477  Sum_probs=130.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+..+.++.+++||++|+++++++++.+.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            48899999999999999999999999999999999999999999998887765566788888888888888888555555


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                      ++|++|+||||||                                                              ...+.
T Consensus        82 ~~g~iDilvnnAG--------------------------------------------------------------~~~~~   99 (272)
T d1xkqa_          82 QFGKIDVLVNNAG--------------------------------------------------------------AAIPD   99 (272)
T ss_dssp             HHSCCCEEEECCC--------------------------------------------------------------CCCCC
T ss_pred             HhCCceEEEeCCc--------------------------------------------------------------ccCcc
Confidence            5555555555555                                                              43332


Q ss_pred             c----ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcc-cccccCCCCCCccccCC
Q psy9256         203 A----WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSS-IAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS-~ag~~~~~~~~~Y~asK  265 (265)
                      +    ..+.+.++|++++++|+.|+++++|+++|+|++++  |++|+++| .++..+.|++++|++||
T Consensus       100 ~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~Ss~a~~~~~~~~~~Y~asK  165 (272)
T d1xkqa_         100 AFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQPDFLYYAIAK  165 (272)
T ss_dssp             TTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSCCCSSHHHHHHH
T ss_pred             cccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC--CccccccchhccccCCCCcchhhhHH
Confidence            2    34567789999999999999999999999998764  55555555 67889999999999987

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6e-33  Score=240.48  Aligned_cols=163  Identities=32%  Similarity=0.448  Sum_probs=129.3

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+..+.++.++++|++++++++++++.+.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999888765566788889999999888888666666


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                      ++|++|+||||||+..+.                                                          ....
T Consensus        82 ~~g~iDilvnnAG~~~~~----------------------------------------------------------~~~~  103 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPD----------------------------------------------------------SQSK  103 (264)
T ss_dssp             HHSCCCEEEECCC-------------------------------------------------------------------
T ss_pred             HhCCCCEeecccccccCC----------------------------------------------------------cccc
Confidence            666666666665532111                                                          0123


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc-cccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA-GIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a-g~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++|+++|+|++++  |++|+++|.+ +..+.|+.++|++||
T Consensus       104 ~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~S~~~~~~~~~~~~~Y~asK  165 (264)
T d1spxa_         104 TGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFPYYSIAK  165 (264)
T ss_dssp             ----CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCTTSHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc--CcceeeeeeccccccCCCchhhhhhh
Confidence            456678899999999999999999999999998764  6666666665 577999999999987

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-32  Score=237.37  Aligned_cols=162  Identities=27%  Similarity=0.385  Sum_probs=138.7

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |..|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+. +.++.+++||++++++++++    
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~----   79 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-PGTLIPYRCDLSNEEDILSM----   79 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-SSEEEEEECCTTCHHHHHHH----
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CceEEEEEccCCCHHHHHHH----
Confidence            6779999999999999999999999999999999999999999998888877542 34677777787777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|+||||||...
T Consensus        80 ----------------------------------------------------------v~~~~~~~g~iD~lVnnAg~~~  101 (257)
T d1xg5a_          80 ----------------------------------------------------------FSAIRSQHSGVDICINNAGLAR  101 (257)
T ss_dssp             ----------------------------------------------------------HHHHHHHHCCCSEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHhcCCCCEEEecccccC
Confidence                                                                      7777777777777777777777


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc-CCceEEEEcccccccCC--CCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE-QGGHLVVTSSIAGIVGA--PYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~-~~g~IV~isS~ag~~~~--~~~~~Y~asK  265 (265)
                      +.++.+.++++|++.+++|+.++++++++++|.|++++ .+|+||++||.++..+.  ++.+.|++||
T Consensus       102 ~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~sK  169 (257)
T d1xg5a_         102 PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATK  169 (257)
T ss_dssp             CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHH
T ss_pred             CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHHHH
Confidence            88899999999999999999999999999999998764 35899999999997654  4556799887

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.98  E-value=8.8e-33  Score=239.92  Aligned_cols=157  Identities=27%  Similarity=0.373  Sum_probs=130.0

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      +.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..    ..++.+++||++|+++++++     
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~----~~~~~~~~~Dv~~~~~v~~~-----   72 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS----PDVISFVHCDVTKDEDVRNL-----   72 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----TTTEEEEECCTTCHHHHHHH-----
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC----CCceEEEEccCCCHHHHHHH-----
Confidence            468999999999999999999999999999999999998888777666532    24566777888888877777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||....
T Consensus        73 ---------------------------------------------------------~~~~~~~~g~iD~lVnnAG~~~~   95 (268)
T d2bgka1          73 ---------------------------------------------------------VDTTIAKHGKLDIMFGNVGVLST   95 (268)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCCCCS
T ss_pred             ---------------------------------------------------------HHHHHHHcCCcceeccccccccC
Confidence                                                                     55555566666666666665443


Q ss_pred             --ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCC-ccccCC
Q psy9256         202 --AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSG-SYTDHL  265 (265)
Q Consensus       202 --~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~-~Y~asK  265 (265)
                        ..+.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..+.++.. .|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~~Y~asK  161 (268)
T d2bgka1          96 TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATK  161 (268)
T ss_dssp             SCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTSCHHHHHHH
T ss_pred             CCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccccccccccccchhH
Confidence              3477889999999999999999999999999999876 79999999999998777654 799987

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.98  E-value=1.5e-32  Score=237.33  Aligned_cols=159  Identities=25%  Similarity=0.337  Sum_probs=142.0

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   ...+++.+|++++++++++    
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~---~~~~~~~~D~s~~~~~~~~----   73 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG---LNVEGSVCDLLSRTERDKL----   73 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH----
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CCceEEEeecCCHHHHHHH----
Confidence            378999999999999999999999999999999999999999999888887665   5677778888888877777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc-ccccEEEeccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF-GCLDILINNAGRS  199 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~-g~ldilVnnAG~~  199 (265)
                                                                                ++++.+++ |++|++|||||..
T Consensus        74 ----------------------------------------------------------~~~~~~~~~g~idilinnag~~   95 (258)
T d1ae1a_          74 ----------------------------------------------------------MQTVAHVFDGKLNILVNNAGVV   95 (258)
T ss_dssp             ----------------------------------------------------------HHHHHHHTTSCCCEEEECCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHhCCCcEEEecccccc
Confidence                                                                      66666666 5677788888888


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++++.+.++|++++++|+.++++++++++|.|.+++ .|+||++||.++..+.|++++|+++|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~~~~~~Y~~sK  160 (258)
T d1ae1a_          96 IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSASK  160 (258)
T ss_dssp             CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             ccCccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccccccccchhHHHHH
Confidence            788899999999999999999999999999999999886 89999999999999999999999987

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.98  E-value=8.9e-33  Score=236.65  Aligned_cols=151  Identities=23%  Similarity=0.320  Sum_probs=127.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.++        .+..+++||++|+++++++      
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~--------~~~~~~~~Dv~~~~~v~~~------   67 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA--------VGAHPVVMDVADPASVERG------   67 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--------TTCEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------cCCeEEEEecCCHHHHHHH------
Confidence            47899999999999999999999999999999999988777665442        2345667777777777666      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|+||||||+..+.
T Consensus        68 --------------------------------------------------------~~~~~~~~g~iDilVnnAG~~~~~   91 (242)
T d1ulsa_          68 --------------------------------------------------------FAEALAHLGRLDGVVHYAGITRDN   91 (242)
T ss_dssp             --------------------------------------------------------HHHHHHHHSSCCEEEECCCCCCCC
T ss_pred             --------------------------------------------------------HHHHHHhcCCceEEEECCcccccC
Confidence                                                                    777777777777778888877788


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+|+++|| ++..+.|+.++|++||
T Consensus        92 ~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss-~~~~~~~~~~~Y~asK  152 (242)
T d1ulsa_          92 FHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTAS-RVYLGNLGQANYAASM  152 (242)
T ss_dssp             CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECC-GGGGCCTTCHHHHHHH
T ss_pred             chhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeecc-ccccCCCCCcchHHHH
Confidence            899999999999999999999999999999998876 677777666 5678889999999987

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.98  E-value=8.2e-33  Score=244.11  Aligned_cols=155  Identities=21%  Similarity=0.308  Sum_probs=128.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc---------HHHHHHHHHHhCCCCCcEEEEeecCCChHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN---------LERVKNLCVQAGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (265)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.         ++++.+++..      +.....+|+++   
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~d~~~---   73 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR------RGGKAVANYDS---   73 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH------TTCEEEEECCC---
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh------cccccccccch---
Confidence            46899999999999999999999999999999999876432         2222222221      11223444444   


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEE
Q psy9256         113 HRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDIL  192 (265)
Q Consensus       113 ~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldil  192 (265)
                                                                                 .++++++++++.+++|++|+|
T Consensus        74 -----------------------------------------------------------~~~~~~~v~~~~~~~G~iDiL   94 (302)
T d1gz6a_          74 -----------------------------------------------------------VEAGEKLVKTALDTFGRIDVV   94 (302)
T ss_dssp             -----------------------------------------------------------GGGHHHHHHHHHHHTSCCCEE
T ss_pred             -----------------------------------------------------------HHHHHHHHHHHHHHcCCCCEE
Confidence                                                                       444555588888888888888


Q ss_pred             EecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         193 INNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       193 VnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      |||||+..++++.++++++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..+.|++++|++||
T Consensus        95 VnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~~~~~Y~asK  166 (302)
T d1gz6a_          95 VNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQANYSAAK  166 (302)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             EECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCCCcHHHHHHH
Confidence            8888888889999999999999999999999999999999999886 79999999999999999999999987

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.7e-32  Score=234.89  Aligned_cols=150  Identities=25%  Similarity=0.368  Sum_probs=129.3

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++       ..+..+.+|++|+++++++      
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-------~~~~~~~~Dv~~~~~v~~~------   68 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-------PGIEPVCVDLGDWDATEKA------   68 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-------TTCEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-------CCCeEEEEeCCCHHHHHHH------
Confidence            589999999999999999999999999999999999887766655432       2455667777776654433      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                                  .+++|++|+||||||+...+
T Consensus        69 ------------------------------------------------------------~~~~g~iDilVnnAg~~~~~   88 (242)
T d1cyda_          69 ------------------------------------------------------------LGGIGPVDLLVNNAALVIMQ   88 (242)
T ss_dssp             ------------------------------------------------------------HTTCCCCSEEEECCCCCCCB
T ss_pred             ------------------------------------------------------------HHHcCCCeEEEECCccccch
Confidence                                                                        34678888888888888888


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.++++|++++++|+.++++++|+++|.|.+++.+|+||++||.++..+.|+.++|++||
T Consensus        89 ~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  151 (242)
T d1cyda_          89 PFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  151 (242)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence            999999999999999999999999999999987766579999999999999999999999987

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.97  E-value=6.2e-32  Score=233.54  Aligned_cols=159  Identities=25%  Similarity=0.314  Sum_probs=135.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+..  +.++.+++||++|+++++++      
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~------   77 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCDVSNTDIVTKT------   77 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHH------
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh--CCceEEEEccCCCHHHHHHH------
Confidence            7899999999999999999999999999999999999999988777665432  24667777777777777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|+||||||.....
T Consensus        78 --------------------------------------------------------~~~~~~~~g~iDilVnnAg~~~~~  101 (260)
T d1h5qa_          78 --------------------------------------------------------IQQIDADLGPISGLIANAGVSVVK  101 (260)
T ss_dssp             --------------------------------------------------------HHHHHHHSCSEEEEEECCCCCCCS
T ss_pred             --------------------------------------------------------HHHHHHHhCCCcEecccccccccC
Confidence                                                                    777777788888888888888888


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC-------CCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG-------APYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~-------~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++|+++|+|.+++.+|+|++++|..+..+       .++.++|++||
T Consensus       102 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asK  171 (260)
T d1h5qa_         102 PATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSK  171 (260)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHH
T ss_pred             CHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchhhhh
Confidence            8999999999999999999999999999999987766789999888776653       35678899987

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.5e-32  Score=233.12  Aligned_cols=150  Identities=25%  Similarity=0.391  Sum_probs=130.2

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++       ..+..+.+|++|+++++++      
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~~Dv~d~~~v~~~------   70 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-------PGIEPVCVDLGDWEATERA------   70 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-------TTCEEEECCTTCHHHHHHH------
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc-------CCCeEEEEeCCCHHHHHHH------
Confidence            489999999999999999999999999999999999987777665542       2456677777777665444      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                                  .+++|++|+||||||....+
T Consensus        71 ------------------------------------------------------------~~~~g~iDilVnnAg~~~~~   90 (244)
T d1pr9a_          71 ------------------------------------------------------------LGSVGPVDLLVNNAAVALLQ   90 (244)
T ss_dssp             ------------------------------------------------------------HTTCCCCCEEEECCCCCCCB
T ss_pred             ------------------------------------------------------------HHHhCCceEEEecccccccc
Confidence                                                                        34568888888888888888


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.++++++|+++|.|.+++.+|+||++||.++..+.|+.++|++||
T Consensus        91 ~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK  153 (244)
T d1pr9a_          91 PFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK  153 (244)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             chhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhH
Confidence            999999999999999999999999999999877665579999999999999999999999987

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.97  E-value=6.8e-32  Score=235.29  Aligned_cols=158  Identities=24%  Similarity=0.306  Sum_probs=128.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|+||+++||||++|||+++|++|+++|++|++++|++++++++.++.   +   .++..+.+|++++++++++++.+.+
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~---~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---G---DNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G---GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C---CCeeEEecccccHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987776655543   2   5788888999999988888666666


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                      ++|++|++|||||+.....                                                         ....
T Consensus        76 ~~g~idilvnnAG~~~~~~---------------------------------------------------------~~~~   98 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYST---------------------------------------------------------ALVD   98 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTC---------------------------------------------------------CGGG
T ss_pred             HhCCcccccccccccCCCC---------------------------------------------------------cccc
Confidence            6666666666666432211                                                         0112


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...+.+.++|++++++|+.|+++++|+++|+|++++  |+||+++|.++..+.|++++|++||
T Consensus        99 ~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~~~~~~~Y~asK  159 (276)
T d1bdba_          99 LPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYPNGGGPLYTAAK  159 (276)
T ss_dssp             SCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSTTSSCHHHHHHH
T ss_pred             ccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccCCCCCchHHHHH
Confidence            234556678999999999999999999999998764  8999999999999999999999987

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-31  Score=235.07  Aligned_cols=160  Identities=18%  Similarity=0.293  Sum_probs=136.5

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCC--CCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGA--HPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.....  .+.++.+++||++|+++++++   
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~---   84 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL---   84 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH---
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHH---
Confidence            468999999999999999999999999999999999999999888888765432  245666777777777776666   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++++.+++|++|+||||||..
T Consensus        85 -----------------------------------------------------------~~~~~~~~G~iDiLVnnAg~~  105 (297)
T d1yxma1          85 -----------------------------------------------------------VKSTLDTFGKINFLVNNGGGQ  105 (297)
T ss_dssp             -----------------------------------------------------------HHHHHHHHSCCCEEEECCCCC
T ss_pred             -----------------------------------------------------------HHHHHHHhCCeEEEEeecccc
Confidence                                                                       777777777777788887777


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++++++|+.|+++++|+++|.|++++ .|+||++|| ++..+.|+.+.|++||
T Consensus       106 ~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss-~~~~~~~~~~~Y~asK  169 (297)
T d1yxma1         106 FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIV-PTKAGFPLAVHSGAAR  169 (297)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECC-CCTTCCTTCHHHHHHH
T ss_pred             ccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccc-cccccccccccchhHH
Confidence            788899999999999999999999999999999999887 788998866 5667789999999887

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.5e-31  Score=230.82  Aligned_cols=165  Identities=25%  Similarity=0.203  Sum_probs=135.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHH---cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSK---CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ..|+||++|||||++|||+++|++|++   +|++|++++|++++++++.+++...+. +.++.+++||++++++++++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~Dvs~~~~v~~l~~   80 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLGTEAGVQRLLS   80 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcC-CceEEEEEccCCCHHHHHHHHH
Confidence            468999999999999999999999986   799999999999999999888876542 3577788888888888887744


Q ss_pred             HHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGR  198 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~  198 (265)
                      .+++..                                                          ...++++|++|||||.
T Consensus        81 ~~~~~~----------------------------------------------------------~~~~~~~~~lvnnag~  102 (259)
T d1oaaa_          81 AVRELP----------------------------------------------------------RPEGLQRLLLINNAAT  102 (259)
T ss_dssp             HHHHSC----------------------------------------------------------CCTTCCEEEEEECCCC
T ss_pred             HHHHhh----------------------------------------------------------hhccCceEEEEecccc
Confidence            433211                                                          0123466777777776


Q ss_pred             cc---cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC-CceEEEEcccccccCCCCCCccccCC
Q psy9256         199 SQ---RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ-GGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       199 ~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~-~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..   .+++++.++++|++++++|+.|+++++|+++|+|+++++ .|+||++||.++..+.|++++|++||
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  173 (259)
T d1oaaa_         103 LGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGK  173 (259)
T ss_dssp             CCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccchHHHHHH
Confidence            43   456889999999999999999999999999999987642 48999999999999999999999987

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-31  Score=229.29  Aligned_cols=150  Identities=31%  Similarity=0.414  Sum_probs=123.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. .+.++.+++||++|+++++++++.+.+.+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-CGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc-CCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            69999999999999999999999999999999999988888877765432 24577788888888888888855555555


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                      |++|+||||||                                                              ..     
T Consensus        81 G~iDilVnnAg--------------------------------------------------------------~~-----   93 (254)
T d2gdza1          81 GRLDILVNNAG--------------------------------------------------------------VN-----   93 (254)
T ss_dssp             SCCCEEEECCC--------------------------------------------------------------CC-----
T ss_pred             CCcCeeccccc--------------------------------------------------------------cc-----
Confidence            55555555554                                                              32     


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcC--CceEEEEcccccccCCCCCCccccCC
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQ--GGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~--~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                         .+++|++.+++|+.+++++++.++|+|.+++.  +|+||++||.++..|.|++++|++||
T Consensus        94 ---~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  153 (254)
T d2gdza1          94 ---NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASK  153 (254)
T ss_dssp             ---CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             ---ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHH
Confidence               23568999999999999999999999987642  48999999999999999999999987

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.5e-31  Score=228.55  Aligned_cols=156  Identities=29%  Similarity=0.413  Sum_probs=137.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |+||+++||||++|||+++|++|+++|++|++++|++++++++.+++....  +.....+.+|.++.+.+...       
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~-------   82 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG--AASAHYIAGTMEDMTFAEQF-------   82 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CSEEEEEECCTTCHHHHHHH-------
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh--cccchhhhhhhhhHHHHHHH-------
Confidence            899999999999999999999999999999999999999999888776554  35677777888887777777       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             .+.+.+.+|.+|+++||||.....+
T Consensus        83 -------------------------------------------------------~~~~~~~~g~~~~li~nag~~~~~~  107 (269)
T d1xu9a_          83 -------------------------------------------------------VAQAGKLMGGLDMLILNHITNTSLN  107 (269)
T ss_dssp             -------------------------------------------------------HHHHHHHHTSCSEEEECCCCCCCCC
T ss_pred             -------------------------------------------------------HHHHHHHhCCccccccccccccccc
Confidence                                                                   6666666677777777777777788


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.+.++|++++++|+.|++++++.++|+|+++  +|+||++||.++..+.|++++|++||
T Consensus       108 ~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~~~~p~~~~Y~asK  167 (269)
T d1xu9a_         108 LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAYSASK  167 (269)
T ss_dssp             CCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             cccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhcCCCCCchHHHHHH
Confidence            8889999999999999999999999999999754  59999999999999999999999997

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.97  E-value=7e-31  Score=226.29  Aligned_cols=151  Identities=21%  Similarity=0.244  Sum_probs=122.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCC-ChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT-QTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~  121 (265)
                      +|+||+++||||++|||+++|++|+++|++|++++|+.++.+++.+......  ..++.++.+|++ +.++++++     
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~-----   74 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP--KVNITFHTYDVTVPVAESKKL-----   74 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT--TSEEEEEECCTTSCHHHHHHH-----
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCC--CCCEEEEEeecCCCHHHHHHH-----
Confidence            5899999999999999999999999999999999999888776655443333  456777888887 45567777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|+||||||.   
T Consensus        75 ---------------------------------------------------------~~~~~~~~g~iDilvnnAG~---   94 (254)
T d1sbya1          75 ---------------------------------------------------------LKKIFDQLKTVDILINGAGI---   94 (254)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCCCEEEECCCC---
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCCEEEeCCCC---
Confidence                                                                     45555555555555555553   


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc--CCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE--QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~--~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                           .++++|++++++|++|+++++++++|.|.+++  ++|+||++||.++..+.|++++|++||
T Consensus        95 -----~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK  155 (254)
T d1sbya1          95 -----LDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASK  155 (254)
T ss_dssp             -----CCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHH
T ss_pred             -----CCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHH
Confidence                 34578999999999999999999999998763  368999999999999999999999987

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.6e-31  Score=231.05  Aligned_cols=155  Identities=27%  Similarity=0.374  Sum_probs=134.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEE---ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLS---ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|++|||||++|||+++|++|+++|++|+.+   +|+.+..+++.+...+....+.++.++.||++|+++++++      
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~------   75 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA------   75 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHH------
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhh------
Confidence            5899999999999999999999999985554   5566666667777777666677888888888888887777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.  .|++|++|||||....+
T Consensus        76 --------------------------------------------------------~~~~~--~g~idilvnnag~~~~~   97 (285)
T d1jtva_          76 --------------------------------------------------------RERVT--EGRVDVLVCNAGLGLLG   97 (285)
T ss_dssp             --------------------------------------------------------HHTCT--TSCCSEEEECCCCCCCS
T ss_pred             --------------------------------------------------------hhhcc--ccchhhhhhcccccccc
Confidence                                                                    55443  37888888888888888


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||++|..+.|++++|++||
T Consensus        98 ~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~~~~~Y~asK  159 (285)
T d1jtva_          98 PLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCASK  159 (285)
T ss_dssp             CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             cccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCCCchHHHHHH
Confidence            999999999999999999999999999999999886 79999999999999999999999997

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.97  E-value=3e-31  Score=228.24  Aligned_cols=146  Identities=18%  Similarity=0.176  Sum_probs=123.4

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      |+|||||++|||+++|++|+++|++|++++|+.+.++++.......         ..+|++++++               
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~---------~~~dv~~~~~---------------   57 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETY---------PQLKPMSEQE---------------   57 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHC---------TTSEECCCCS---------------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcE---------EEeccCCHHH---------------
Confidence            7999999999999999999999999999999988877665433221         2345555444               


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc-cccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ-RAAWED  206 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~-~~~~~~  206 (265)
                                                                     ++++++++.+++|++|+||||||+.. .+++.+
T Consensus        58 -----------------------------------------------~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~   90 (252)
T d1zmta1          58 -----------------------------------------------PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDK   90 (252)
T ss_dssp             -----------------------------------------------HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGG
T ss_pred             -----------------------------------------------HHHHHHHHHHHcCCCCEEEECCcCCCCCCChhh
Confidence                                                           44447777777788888888887753 478999


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+.++|++.+++|+.++++++|+++|+|++++ .|+||++||.++..+.|+.++|++||
T Consensus        91 ~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~~~~~Y~asK  148 (252)
T d1zmta1          91 YAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSAR  148 (252)
T ss_dssp             SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHH
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccccccccccccccc
Confidence            99999999999999999999999999999886 79999999999999999999999987

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-31  Score=232.57  Aligned_cols=151  Identities=23%  Similarity=0.241  Sum_probs=128.0

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +++|||||++|||+++|++|+++ |++|++++|++++++++.+++...+   .++.+++||++|.++++++         
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dvs~~~sv~~~---------   71 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDIDDLQSIRAL---------   71 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTCHHHHHHH---------
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEEecCCHHHHHHH---------
Confidence            56799999999999999999986 8999999999999999988887654   5677888888888888888         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++++.+++|++|+||||||+..+.+..
T Consensus        72 -----------------------------------------------------~~~~~~~~g~iDiLVnNAGi~~~~~~~   98 (275)
T d1wmaa1          72 -----------------------------------------------------RDFLRKEYGGLDVLVNNAGIAFKVADP   98 (275)
T ss_dssp             -----------------------------------------------------HHHHHHHHSSEEEEEECCCCCCCTTCC
T ss_pred             -----------------------------------------------------HHHHHHhcCCcEEEEEcCCcCCCCCcc
Confidence                                                                 666666666666666666766667777


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|+++|++|++|+++++++++|+|++   .|+||++||+++..+.+..+.|.++|
T Consensus        99 ~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y~~~k  155 (275)
T d1wmaa1          99 TPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQK  155 (275)
T ss_dssp             SCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccceeccccccchhhhhh
Confidence            8888999999999999999999999999964   48999999999998888877776553

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.96  E-value=5.5e-30  Score=221.06  Aligned_cols=155  Identities=26%  Similarity=0.380  Sum_probs=130.0

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .|.||++|||||++|||+++|++|+++|++|++++++ ++.++++.+++.+.+   .++.++++|++|+++++++     
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g---~~~~~~~~D~~~~~~v~~~-----   74 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG---AQGVAIQADISKPSEVVAL-----   74 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHH-----
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcC---CCceEecCCCCCHHHHHHH-----
Confidence            5899999999999999999999999999999987654 445677777776654   5677788888888777777     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++++.+++|++|++|||||....
T Consensus        75 ---------------------------------------------------------~~~~~~~~g~idilinnag~~~~   97 (259)
T d1ja9a_          75 ---------------------------------------------------------FDKAVSHFGGLDFVMSNSGMEVW   97 (259)
T ss_dssp             ---------------------------------------------------------HHHHHHHHSCEEEEECCCCCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHcCCCcEEEeccccccc
Confidence                                                                     77777777778888888888778


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-CCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-GAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-~~~~~~~Y~asK  265 (265)
                      .++.+.+.++|++.+++|+.++++++|+++|+|+++   |++++++|..+.. +.|+++.|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---g~~iii~s~~~~~~~~~~~~~Y~asK  159 (259)
T d1ja9a_          98 CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSSIAAVMTGIPNHALYAGSK  159 (259)
T ss_dssp             CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE---EEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred             cccccchHHHHHHHHhhccceeeeehhhhhhhhhcC---CcccccccccccccCCCCchhHHHHH
Confidence            889999999999999999999999999999999643   6777777766644 789999999987

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=1e-29  Score=218.76  Aligned_cols=155  Identities=21%  Similarity=0.248  Sum_probs=123.5

Q ss_pred             cccCCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .+|+||++|||||++  |||+++|++|+++|++|++++|+++..+++.+.....    .+..++++|++|+++++++++.
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL----GGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT----TCCEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhcc----CcccccccccCCHHHHHHHHHH
Confidence            479999999999886  9999999999999999999999876555554443332    3456678888888887777555


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                      +.++                                                              +|++|+||||||..
T Consensus        80 ~~~~--------------------------------------------------------------~g~iDilVnnag~~   97 (256)
T d1ulua_          80 VKEA--------------------------------------------------------------FGGLDYLVHAIAFA   97 (256)
T ss_dssp             HHHH--------------------------------------------------------------HSSEEEEEECCCCC
T ss_pred             HHHh--------------------------------------------------------------cCCceEEEeccccc
Confidence            4444                                                              45555555555543


Q ss_pred             c----cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 Q----RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .    ..++.+.+.++|+..+++|+.++++++|++.|+|.+   +|+||++||.++..+.|+.++|++||
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~isS~~~~~~~~~~~~Y~asK  164 (256)
T d1ulua_          98 PREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVPKYNVMAIAK  164 (256)
T ss_dssp             CHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             cccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEEeehHhcCCCCCchHHHHHH
Confidence            2    235677888999999999999999999999999864   48999999999999999999999987

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=2.5e-29  Score=215.39  Aligned_cols=153  Identities=18%  Similarity=0.227  Sum_probs=125.2

Q ss_pred             cEEEEcCCCCchhHHHHHHHH---HcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLS---KCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~---~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |++|||||++|||+++|++|+   ++|++|++++|++++++++.+....    ..++.+++||++|+++++++       
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dvs~~~~v~~~-------   71 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN----HSNIHILEIDLRNFDAYDKL-------   71 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH----CTTEEEEECCTTCGGGHHHH-------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc----CCcEEEEEEEeccHHHHHHH-------
Confidence            789999999999999999996   5799999999999999887654443    24788888888888888888       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHH--hhcccccEEEeccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVI--QQFGCLDILINNAGRSQR  201 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~--~~~g~ldilVnnAG~~~~  201 (265)
                                                                             ++++.  .+++++|+||||||+...
T Consensus        72 -------------------------------------------------------~~~i~~~~~~~~iDiLvnNAg~~~~   96 (248)
T d1snya_          72 -------------------------------------------------------VADIEGVTKDQGLNVLFNNAGIAPK   96 (248)
T ss_dssp             -------------------------------------------------------HHHHHHHHGGGCCSEEEECCCCCCC
T ss_pred             -------------------------------------------------------HhhhHHHhhcCCcceEEeecccccc
Confidence                                                                   55543  245677777777776544


Q ss_pred             -ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc----------CCceEEEEcccccccC---CCCCCccccCC
Q psy9256         202 -AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE----------QGGHLVVTSSIAGIVG---APYSGSYTDHL  265 (265)
Q Consensus       202 -~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~----------~~g~IV~isS~ag~~~---~~~~~~Y~asK  265 (265)
                       .++.+.+.++|++++++|+.|+++++++++|+|+++.          .+|++|+++|++|..+   .+++.+|++||
T Consensus        97 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSK  174 (248)
T d1snya_          97 SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSK  174 (248)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHH
T ss_pred             CcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCCCChHHHHHHH
Confidence             4678899999999999999999999999999998752          2689999999998764   45667899987

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=1.9e-29  Score=214.58  Aligned_cols=141  Identities=23%  Similarity=0.288  Sum_probs=121.2

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++       .     ...++.||+++.             
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~-----~~~~~~~Dv~~~-------------   56 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S-----GHRYVVCDLRKD-------------   56 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T-----CSEEEECCTTTC-------------
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------c-----CCcEEEcchHHH-------------
Confidence            689999999999999999999999999999999998644322       1     123456666542             


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++.+.+++|++|+||||||.....+
T Consensus        57 -------------------------------------------------------~~~~~~~~g~iD~lVnnAG~~~~~~   81 (234)
T d1o5ia_          57 -------------------------------------------------------LDLLFEKVKEVDILVLNAGGPKAGF   81 (234)
T ss_dssp             -------------------------------------------------------HHHHHHHSCCCSEEEECCCCCCCBC
T ss_pred             -------------------------------------------------------HHHHHHHhCCCcEEEecccccCCcc
Confidence                                                                   4455667788888888888888889


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+++.++|++.+++|+.++++++|+++|.|++++ .|+||+++|.++..+.++...|++||
T Consensus        82 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~~~~~~Y~asK  142 (234)
T d1o5ia_          82 FDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSAR  142 (234)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             hhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccccccccccchhHH
Confidence            99999999999999999999999999999999876 79999999999999999999999887

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.96  E-value=1.5e-29  Score=216.20  Aligned_cols=151  Identities=26%  Similarity=0.328  Sum_probs=120.3

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|+||+++||||++|||+++|++|+++|++|++++|+.+.++++.+   +.+   .++.++++|++++++++++      
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~---~~~~~~~~Dls~~~~i~~~------   69 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---ALE---AEAIAVVADVSDPKAVEAV------   69 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TCC---SSEEEEECCTTSHHHHHHH------
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcC---CceEEEEecCCCHHHHHHH------
Confidence            5789999999999999999999999999999999998766554433   332   5677777888887777777      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                              ++++.+++|++|+||||||...+.
T Consensus        70 --------------------------------------------------------~~~i~~~~g~iDiLinnAg~~~~~   93 (241)
T d2a4ka1          70 --------------------------------------------------------FAEALEEFGRLHGVAHFAGVAHSA   93 (241)
T ss_dssp             --------------------------------------------------------HHHHHHHHSCCCEEEEGGGGTTTT
T ss_pred             --------------------------------------------------------HHHHHHHhCCccEecccccccccc
Confidence                                                                    667777777777777777777778


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.+++.++|++.|+|.+   +++|+++||.+ ..+.|++..|+++|
T Consensus        94 ~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~---~~~i~~~ss~a-~~~~~~~~~Y~~sK  152 (241)
T d2a4ka1          94 LSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE---GGSLVLTGSVA-GLGAFGLAHYAAGK  152 (241)
T ss_dssp             C----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT---TCEEEEECCCT-TCCHHHHHHHHHCS
T ss_pred             chhhhhcccccccccccccccccccccccccccc---ccceeeccccc-cccccCccccchhh
Confidence            8999999999999999999999999999999864   35676666655 44558889999998

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.96  E-value=1.4e-28  Score=213.49  Aligned_cols=156  Identities=26%  Similarity=0.392  Sum_probs=130.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC-CcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS-SNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..|+||+++||||++|||+++|++|+++|++|++++|+. +.++++.+++.+.+   .++.++.+|++|+++++++    
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g---~~~~~~~~D~~~~~~v~~~----   86 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG---SDAACVKANVGVVEDIVRM----   86 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHH----
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhC---CceeeEeCCCCCHHHHHHH----
Confidence            458999999999999999999999999999999998874 45566666665544   5677777777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.+|++|++|||+|...
T Consensus        87 ----------------------------------------------------------~~~~~~~~g~idilV~nag~~~  108 (272)
T d1g0oa_          87 ----------------------------------------------------------FEEAVKIFGKLDIVCSNSGVVS  108 (272)
T ss_dssp             ----------------------------------------------------------HHHHHHHHSCCCEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHhCCCCccccccccch
Confidence                                                                      7777777777788888888777


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-CCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-GAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-~~~~~~~Y~asK  265 (265)
                      ..++.+.+.++|++++++|+.++++++|+++|+|.+   +|++++++|..+.. +.++++.|++||
T Consensus       109 ~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---~g~~i~i~s~~~~~~~~~~~~~Y~asK  171 (272)
T d1g0oa_         109 FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI---GGRLILMGSITGQAKAVPKHAVYSGSK  171 (272)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT---TCEEEEECCGGGTCSSCSSCHHHHHHH
T ss_pred             hhhhhhhhhhHHHHHhhhccceeeeecccccccccc---ccccccccccccccccccchhhHHHHH
Confidence            888999999999999999999999999999999975   37888898887655 567778899887

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1e-28  Score=211.48  Aligned_cols=150  Identities=29%  Similarity=0.358  Sum_probs=126.7

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |..|+||++|||||++|||+++|++|+++|++|++++|++++++++.+        .....+..+|+.+.+.        
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~--------~~~~~~~~~d~~~~~~--------   64 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK--------YPGIQTRVLDVTKKKQ--------   64 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG--------STTEEEEECCTTCHHH--------
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh--------ccCCceeeeecccccc--------
Confidence            456999999999999999999999999999999999998776655432        1245566666665443        


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++...++++++|+||||||...
T Consensus        65 ----------------------------------------------------------~~~~~~~~~~id~lVn~ag~~~   86 (245)
T d2ag5a1          65 ----------------------------------------------------------IDQFANEVERLDVLFNVAGFVH   86 (245)
T ss_dssp             ----------------------------------------------------------HHHHHHHCSCCSEEEECCCCCC
T ss_pred             ----------------------------------------------------------ccccccccccceeEEecccccC
Confidence                                                                      4444556688899999999888


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc-cCCCCCCccccCC
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI-VGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~-~~~~~~~~Y~asK  265 (265)
                      .+++.+.+.++|++.+++|+.++++++|++.|+|.+++ .|+||++||.++. .+.+++.+|++||
T Consensus        87 ~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~~~~~~~Y~~sK  151 (245)
T d2ag5a1          87 HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTK  151 (245)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCCccchhHHHHHH
Confidence            88999999999999999999999999999999998876 7999999998886 4788899999987

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.95  E-value=2.1e-28  Score=214.38  Aligned_cols=162  Identities=18%  Similarity=0.261  Sum_probs=139.4

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +.++|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++....  +.+..++++|++++++++++   
T Consensus        19 ~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~--g~~~~~~~~D~~~~~~v~~~---   93 (294)
T d1w6ua_          19 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT--GNKVHAIQCDVRDPDMVQNT---   93 (294)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHH---
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc--CCceEEEEecccChHHHHHH---
Confidence            3458999999999999999999999999999999999999998888887765543  35677777888887777777   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                 ++.+.++++++|+||||||..
T Consensus        94 -----------------------------------------------------------~~~~~~~~g~iDilvnnAg~~  114 (294)
T d1w6ua_          94 -----------------------------------------------------------VSELIKVAGHPNIVINNAAGN  114 (294)
T ss_dssp             -----------------------------------------------------------HHHHHHHTCSCSEEEECCCCC
T ss_pred             -----------------------------------------------------------hhhhhhhccccchhhhhhhhc
Confidence                                                                       666667777777777777777


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ...++.+.+.++|++.+++|+.+++++.+...+.+...+..+.+++++|.++..+.|+..+|++||
T Consensus       115 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasK  180 (294)
T d1w6ua_         115 FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK  180 (294)
T ss_dssp             CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             cccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHH
Confidence            777888999999999999999999999999988887766678999999999999999999999987

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-27  Score=204.00  Aligned_cols=161  Identities=24%  Similarity=0.259  Sum_probs=136.6

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +   .+.....+|+.+.+.++...+.+..
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~---~~~~~~~~~~~~~~~~~~~~~~~~~   75 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---G---NNCVFAPADVTSEKDVQTALALAKG   75 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---C---TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---C---CCccccccccccccccccccccccc
Confidence            689999999999999999999999999999999999999888776654   2   4677889999999999988777777


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                      ..+.+|.+++|+++.                                                        ++++.....
T Consensus        76 ~~~~~~~~~~~~~~~--------------------------------------------------------~~~~~~~~~   99 (248)
T d2o23a1          76 KFGRVDVAVNCAGIA--------------------------------------------------------VASKTYNLK   99 (248)
T ss_dssp             HHSCCCEEEECCCCC--------------------------------------------------------CCCCSEETT
T ss_pred             ccccccccccccccc--------------------------------------------------------cCCCccccc
Confidence            777777777777621                                                        122233446


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh-----cCCceEEEEcccccccCCCCCCccccCC
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAR-----EQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~-----~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ++.+.+.++|++++++|+.++++++|++.|+|..+     ..+|+||++||.++..+.|++++|++||
T Consensus       100 ~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  167 (248)
T d2o23a1         100 KGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASK  167 (248)
T ss_dssp             TTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             ccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchHHHHHH
Confidence            67788899999999999999999999999998654     2368999999999999999999999987

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.95  E-value=1.2e-27  Score=205.00  Aligned_cols=154  Identities=25%  Similarity=0.250  Sum_probs=121.2

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      |+.|++|||||++|||+++|++|+++|+  +|++++|++++++++.+.      .+.++.+++||++|+++++++     
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~------~~~~~~~~~~Dvs~~~~v~~~-----   69 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI------KDSRVHVLPLTVTCDKSLDTF-----   69 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC------CCTTEEEEECCTTCHHHHHHH-----
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh------hCCceEEEEEecCCHHHHHHH-----
Confidence            5679999999999999999999999996  688889998887665431      245788888898888888888     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccc--ccEEEeccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGC--LDILINNAGRS  199 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~--ldilVnnAG~~  199 (265)
                                                                               ++++.+.++.  +|+||||||+.
T Consensus        70 ---------------------------------------------------------~~~i~~~~~~~~idilinnAG~~   92 (250)
T d1yo6a1          70 ---------------------------------------------------------VSKVGEIVGSDGLSLLINNAGVL   92 (250)
T ss_dssp             ---------------------------------------------------------HHHHHHHHGGGCCCEEEECCCCC
T ss_pred             ---------------------------------------------------------HHHHHHHhCCCCeEEEEEcCccc
Confidence                                                                     5555554443  67777777765


Q ss_pred             c-cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc----------CCceEEEEcccccccCCC-------CCCcc
Q psy9256         200 Q-RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE----------QGGHLVVTSSIAGIVGAP-------YSGSY  261 (265)
Q Consensus       200 ~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~----------~~g~IV~isS~ag~~~~~-------~~~~Y  261 (265)
                      . ..++.+.+.++|++++++|++|++++++.++|+|+++.          ..|++++++|..+..+.+       ...+|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY  172 (250)
T d1yo6a1          93 LSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAY  172 (250)
T ss_dssp             CCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHH
T ss_pred             CCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcccccchhHHHH
Confidence            3 35677889999999999999999999999999998753          137899999887765433       23459


Q ss_pred             ccCC
Q psy9256         262 TDHL  265 (265)
Q Consensus       262 ~asK  265 (265)
                      ++||
T Consensus       173 ~aSK  176 (250)
T d1yo6a1         173 RMSK  176 (250)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9887

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.93  E-value=1.3e-26  Score=201.16  Aligned_cols=172  Identities=17%  Similarity=0.114  Sum_probs=137.5

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC-CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARS-SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      .++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++.+..  +.....+++|.++...             
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~d~~~~~~-------------   67 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR--PNSAITVQADLSNVAT-------------   67 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSCB-------------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhc--CCceEEEEeecccccc-------------
Confidence            489999999999999999999999999998775 455666777776665  4678889999887643             


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                      ....+....+|++++++++++++++.+++|++|+||||||...+.++.
T Consensus        68 --------------------------------~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~  115 (284)
T d1e7wa_          68 --------------------------------APVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLL  115 (284)
T ss_dssp             --------------------------------CCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCC
T ss_pred             --------------------------------cccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchh
Confidence                                            123456678999999999999999999999999999999999888887


Q ss_pred             ccchHHHH--------------hhhhhhhhHHHHHHHHHHHHhhh-----hcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         206 DIELEVDR--------------ELFELNVFSVLSLSRIATSYFLA-----REQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       206 ~~~~~~~~--------------~~~~~N~~~~~~l~~~~~p~l~~-----~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++|+              .++++|+.++++++|.+.+.+..     ++..|+|++++|..+..+.+++++|++||
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asK  194 (284)
T d1e7wa_         116 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAK  194 (284)
T ss_dssp             C-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred             hCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhcCCCCcccccccccccCCccceeeecccc
Confidence            77766554              47999999999999999887532     23368999999999999999999999987

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.92  E-value=8.1e-26  Score=194.15  Aligned_cols=153  Identities=22%  Similarity=0.242  Sum_probs=123.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +++++|||||++|||+++|++|+++|+ +|++++|+....+.+.+.+.+....+.++.++.||++|+++++++       
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~-------   80 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVREL-------   80 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH-------
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHh-------
Confidence            457999999999999999999999999 589999975554444443333322235677777777777766666       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++++.+ .+++|.++||+|.....+
T Consensus        81 -------------------------------------------------------~~~i~~-~~~i~~vv~~ag~~~~~~  104 (259)
T d2fr1a1          81 -------------------------------------------------------LGGIGD-DVPLSAVFHAAATLDDGT  104 (259)
T ss_dssp             -------------------------------------------------------HHTSCT-TSCEEEEEECCCCCCCCC
T ss_pred             -------------------------------------------------------hccccc-cccccccccccccccccc
Confidence                                                                   666544 368999999999998999


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      +.+.++++|++++++|+.+++++.+.+.+    ++ .++||++||+++..+.++++.|+++|
T Consensus       105 ~~~~~~~~~~~~~~~~~~g~~~l~~~~~~----~~-~~~iv~~SS~a~~~g~~~~~~YaAak  161 (259)
T d2fr1a1         105 VDTLTGERIERASRAKVLGARNLHELTRE----LD-LTAFVLFSSFASAFGAPGLGGYAPGN  161 (259)
T ss_dssp             GGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC-CSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             cccccHHHHHHHhhhhccchhHHHHHhhc----cC-CceEeeecchhhccCCcccHHHHHHH
Confidence            99999999999999999999988775433    33 68999999999999999999999987

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=1.4e-25  Score=190.56  Aligned_cols=143  Identities=13%  Similarity=0.105  Sum_probs=115.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +||++|||||++|||+++|++|+++|++|+++++++...             ........+|.++.++.+.+        
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~--------   59 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------------ASASVIVKMTDSFTEQADQV--------   59 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-------------SSEEEECCCCSCHHHHHHHH--------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccccceeecccCcHHHHHHH--------
Confidence            489999999999999999999999999999999876432             13444556666666665555        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhc--ccccEEEeccccccc-
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQF--GCLDILINNAGRSQR-  201 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~--g~ldilVnnAG~~~~-  201 (265)
                                                                            .+.+.+.+  +++|+||||||.... 
T Consensus        60 ------------------------------------------------------~~~~~~~~~~~~iD~lInnAG~~~~~   85 (236)
T d1dhra_          60 ------------------------------------------------------TAEVGKLLGDQKVDAILCVAGGWAGG   85 (236)
T ss_dssp             ------------------------------------------------------HHHHHHHHTTCCEEEEEECCCCCCCB
T ss_pred             ------------------------------------------------------HHHHHHHhCCCCceEEEECCcccccc
Confidence                                                                  33333332  467888888886544 


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .+..+.+.++|++++++|+.++++++++++|+|++   +|+||++||.++..+.|++++|++||
T Consensus        86 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y~asK  146 (236)
T d1dhra_          86 NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTPGMIGYGMAK  146 (236)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             cchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHcCCccCCcccHHHH
Confidence            45667778999999999999999999999999953   49999999999999999999999997

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.91  E-value=2.6e-25  Score=188.64  Aligned_cols=141  Identities=18%  Similarity=0.136  Sum_probs=111.7

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      +.++||||++|||+++|++|+++|++|++++|++....             .......+|+++.+.....          
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~----------   59 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSI----------   59 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHH----------
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-------------cccceeccccCchhHHHHH----------
Confidence            34699999999999999999999999999999865321             2334455566655544444          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHh--hcccccEEEeccccccc-cc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQ--QFGCLDILINNAGRSQR-AA  203 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~--~~g~ldilVnnAG~~~~-~~  203 (265)
                                                                          .+.+.+  ++|++|+||||||.... .+
T Consensus        60 ----------------------------------------------------~~~~~~~~~~g~iD~linnAG~~~~~~~   87 (235)
T d1ooea_          60 ----------------------------------------------------LEQTASSLQGSQVDGVFCVAGGWAGGSA   87 (235)
T ss_dssp             ----------------------------------------------------HHHHHHHHTTCCEEEEEECCCCCCCBCT
T ss_pred             ----------------------------------------------------HHHHHHHhcCCCeeEEEECCcccccccc
Confidence                                                                333333  45788888888887554 34


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..+.+.++|+.++++|+.++++++|+++|+|++   +|+||++||.++..+.|++++|++||
T Consensus        88 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~Y~asK  146 (235)
T d1ooea_          88 SSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGPTPSMIGYGMAK  146 (235)
T ss_dssp             TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             cccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccHHhcCCcccccchHHHH
Confidence            566667889999999999999999999999954   48999999999999999999999998

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.91  E-value=1e-24  Score=193.93  Aligned_cols=176  Identities=14%  Similarity=0.162  Sum_probs=133.6

Q ss_pred             CCcEEEEcC--CCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCC---------CCCcEEEEeecCCChHHH
Q psy9256          45 NNKVVWITG--ASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGA---------HPQSIYTLTLDVTQTKYH  113 (265)
Q Consensus        45 ~gk~vlItG--as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~  113 (265)
                      .+|++||||  +++|||+++|++|+++|++|++++++............+...         ........++|++-....
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  558999999999999999999999877655444433221110         011223445554421100


Q ss_pred             HHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEE
Q psy9256         114 RRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILI  193 (265)
Q Consensus       114 ~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilV  193 (265)
                      .                                          ..........+|++++++++++++++.+.+|++|+||
T Consensus        81 ~------------------------------------------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilV  118 (329)
T d1uh5a_          81 D------------------------------------------IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLV  118 (329)
T ss_dssp             G------------------------------------------CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEE
T ss_pred             c------------------------------------------cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeec
Confidence            0                                          0000112346799999999999999999999999999


Q ss_pred             eccccccc--ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCC-CCccccCC
Q psy9256         194 NNAGRSQR--AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPY-SGSYTDHL  265 (265)
Q Consensus       194 nnAG~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~-~~~Y~asK  265 (265)
                      ||||....  +++.+++.++|++++++|++++++++|+++|+|.+   +|+||++||.++..+.|+ .+.|++||
T Consensus       119 nnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~---~GsIv~iss~~~~~~~p~y~~~y~asK  190 (329)
T d1uh5a_         119 HSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP---QSSIISLTYHASQKVVPGYGGGMSSAK  190 (329)
T ss_dssp             ECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSCCTTCTTTHHHHH
T ss_pred             cccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc---ccccccceeehhcccccccchhhhhhh
Confidence            99998653  57899999999999999999999999999999954   489999999999999887 46788887

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.89  E-value=1.5e-23  Score=182.77  Aligned_cols=177  Identities=16%  Similarity=0.108  Sum_probs=124.8

Q ss_pred             cccCCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCC---------CCCcEEEEeecCC--
Q psy9256          42 NYFNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGA---------HPQSIYTLTLDVT--  108 (265)
Q Consensus        42 ~~l~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~~~~~~~~D~~--  108 (265)
                      .+|+||++|||||++  |||+++|++|+++|++|++++|++...............         ........++|..  
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            468999999999875  999999999999999999999875433322222111100         0001122333322  


Q ss_pred             ChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhccc
Q psy9256         109 QTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGC  188 (265)
Q Consensus       109 ~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~  188 (265)
                      +.......                                            -.....+|.+++.+++++++++.+++|+
T Consensus        84 ~~~~~~~d--------------------------------------------v~~~~~~~~~~~~~~~~~~~~~~~~~G~  119 (297)
T d1d7oa_          84 NPEDVPED--------------------------------------------VKANKRYAGSSNWTVQEAAECVRQDFGS  119 (297)
T ss_dssp             SGGGSCHH--------------------------------------------HHTSHHHHHCCCCSHHHHHHHHHHHHSC
T ss_pred             ccccchhh--------------------------------------------hhhhhhhhhccHHHHHHHHHHHHHHhCC
Confidence            11110000                                            0011223567788889999999999999


Q ss_pred             ccEEEecccccc--cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc-CCCCCCccccCC
Q psy9256         189 LDILINNAGRSQ--RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV-GAPYSGSYTDHL  265 (265)
Q Consensus       189 ldilVnnAG~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~-~~~~~~~Y~asK  265 (265)
                      +|+||||||...  ..++.+.+.++|++.+++|+.++++++++++|.|.++   |+++++++.++.. ..+....|+++|
T Consensus       120 iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~y~~aK  196 (297)
T d1d7oa_         120 IDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPG---GASISLTYIASERIIPGYGGGMSSAK  196 (297)
T ss_dssp             EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE---EEEEEEECGGGTSCCTTCTTTHHHHH
T ss_pred             CcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcC---Ccceeeeehhhcccccccccceeccc
Confidence            999999999864  4679999999999999999999999999999998653   5666666666554 457777898876

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=1.4e-22  Score=173.33  Aligned_cols=154  Identities=17%  Similarity=0.220  Sum_probs=120.4

Q ss_pred             ccCCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .|+||++|||||++  |||+++|++|+++|++|++++|+++..+.+.+.....    .+...+..|+++..++...    
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----   73 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL----GSDIVLQCDVAEDASIDTM----   73 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT----TCCCEEECCTTCHHHHHHH----
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhc----CCcceeecccchHHHHHHH----
Confidence            47899999999998  8999999999999999999999976666554444333    3455677777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+.++++|++||||+...
T Consensus        74 ----------------------------------------------------------~~~~~~~~~~~d~~v~~a~~~~   95 (258)
T d1qsga_          74 ----------------------------------------------------------FAELGKVWPKFDGFVHSIGFAP   95 (258)
T ss_dssp             ----------------------------------------------------------HHHHHTTCSSEEEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHhhhcccccceEEEeecccc
Confidence                                                                      5555555555555555555443


Q ss_pred             cc-----cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RA-----AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~-----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ..     ..++...+.|...+++|+.+.+.+++.+.|.|.+   +++|+++||.++..+.|++++|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii~iss~~~~~~~~~~~~Y~~sK  162 (258)
T d1qsga_          96 GDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPNYNVMGLAK  162 (258)
T ss_dssp             GGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEecchhhccCCCCcHHHHHHH
Confidence            22     2345666789999999999999999999999853   47899999999999999999999987

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.86  E-value=1.2e-21  Score=167.64  Aligned_cols=166  Identities=22%  Similarity=0.129  Sum_probs=123.8

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-HHHHHHHHHHhCCCCCcEEEEeecCCC----hHHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-LERVKNLCVQAGAHPQSIYTLTLDVTQ----TKYHRRCFDAVI  121 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~~~~~~  121 (265)
                      .|+|||||++|||+++|++|+++|++|++++|+.+. .+++.+++.+..  +.+....++|..+    .+.+.++++.+.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc--CCceEEEecccccchhHHHHHHHHHHHHH
Confidence            489999999999999999999999999999998665 456677776665  3566666665543    466788888888


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                      +++|++|+||||||+..+..+.......                                                   .
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~---------------------------------------------------~  108 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTN---------------------------------------------------G  108 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC---------------------------------------------------------
T ss_pred             HHhCCCCEEEECCccCCCCccccccccc---------------------------------------------------c
Confidence            8888888888888876655433322111                                                   0


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhc----CCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLARE----QGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~----~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ....+.....+...+..|+.+++...+...+.+....    ..+.+++++|..+..+.|++..|++||
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK  176 (266)
T d1mxha_         109 AADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAK  176 (266)
T ss_dssp             -----CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             hhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccccccCcchhhhhhhH
Confidence            1123345677899999999999999999988875532    257899999999999999999999987

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=9.9e-22  Score=165.91  Aligned_cols=141  Identities=23%  Similarity=0.296  Sum_probs=110.5

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +|++|||||++|||+++|++|+++|++|++++|+++.               .+....++|+++......+.+...    
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~---------------~~~~~~~~d~~~~~~~~~~~~~~~----   61 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---------------EDLIYVEGDVTREEDVRRAVARAQ----   61 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---------------SSSEEEECCTTCHHHHHHHHHHHH----
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc---------------ccceEeeccccchhhhHHHHHhhh----
Confidence            5899999999999999999999999999999998653               345667888888877777633333    


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc----cc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS----QR  201 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~----~~  201 (265)
                                                                                +... .+..+++++..    ..
T Consensus        62 ----------------------------------------------------------~~~~-~~~~~~~~~~~~~~~~~   82 (241)
T d1uaya_          62 ----------------------------------------------------------EEAP-LFAVVSAAGVGLAEKIL   82 (241)
T ss_dssp             ----------------------------------------------------------HHSC-EEEEEECCCCCCCCCSB
T ss_pred             ----------------------------------------------------------cccc-ccchhhhhhcccccccc
Confidence                                                                      2222 22333333322    12


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhh------hhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFL------AREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~------~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      ......+.+.|++++++|+.+++.+++.+.|.+.      +++ .|+||++||.++..+.|++++|++||
T Consensus        83 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asK  151 (241)
T d1uaya_          83 GKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQ-RGVIVNTASVAAFEGQIGQAAYAASK  151 (241)
T ss_dssp             CSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSC-SEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccC-ceeeeeecchhhccCCCCchhhHHHH
Confidence            3455677889999999999999999999999853      333 69999999999999999999999987

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.84  E-value=5.4e-21  Score=164.79  Aligned_cols=154  Identities=19%  Similarity=0.262  Sum_probs=98.9

Q ss_pred             ccCCcEEEEcCCCC--chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASS--GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .|+||++|||||++  |||+++|++|+++|++|++++|+++..+++. ++.+.+   ....+..+|++++++++++    
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~-~l~~~~---~~~~~~~~d~~~~~~~~~~----   73 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVR-PIAQEL---NSPYVYELDVSKEEHFKSL----   73 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHH-HHHHHT---TCCCEEECCTTCHHHHHHH----
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHhhC---CceeEeeecccchhhHHHH----
Confidence            47899999999765  9999999999999999999999865444443 333333   3455677777777777777    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                ++++.+++|++|++|||+|...
T Consensus        74 ----------------------------------------------------------~~~~~~~~g~id~lV~nag~~~   95 (274)
T d2pd4a1          74 ----------------------------------------------------------YNSVKKDLGSLDFIVHSVAFAP   95 (274)
T ss_dssp             ----------------------------------------------------------HHHHHHHTSCEEEEEECCCCCC
T ss_pred             ----------------------------------------------------------HHHHHHHcCCCCeEEeeccccc
Confidence                                                                      5555555555555555555543


Q ss_pred             ccccc----ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         201 RAAWE----DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       201 ~~~~~----~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                      .....    +...+.+...+.++..+.+...+.+.|.   .+.++.|++++|.+...+.+....|++||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~s~~~~~~~~~~~~~y~asK  161 (274)
T d2pd4a1          96 KEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPL---LNNGASVLTLSYLGSTKYMAHYNVMGLAK  161 (274)
T ss_dssp             GGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG---EEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             ccccccccccccchhhhhhhccccccccccccccccc---cccCcceeeecccccccccccchhhhHHH
Confidence            32222    2223333444444444444444433333   23235677777777777888888999876

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.83  E-value=9.7e-21  Score=162.42  Aligned_cols=155  Identities=18%  Similarity=0.146  Sum_probs=115.1

Q ss_pred             ccCCcEEEEcC--CCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITG--ASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItG--as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      -|+||++||||  |++|||+++|++|+++|++|++++|+.+++.+   .+.+..  +.+...++||+++++++.++++.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~--~~~~~~~~~dv~~~~~~~~~~~~v   77 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL--PAKAPLLELDVQNEEHLASLAGRV   77 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS--SSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc--CCceeeEeeecccccccccccchh
Confidence            47899999999  45799999999999999999999998765432   222211  356667888888888888886666


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc-
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS-  199 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~-  199 (265)
                      ++.++                                                           .++.+|+++||+|.. 
T Consensus        78 ~~~~~-----------------------------------------------------------~~~~ld~~i~~ag~~~   98 (268)
T d2h7ma1          78 TEAIG-----------------------------------------------------------AGNKLDGVVHSIGFMP   98 (268)
T ss_dssp             HHHHC-----------------------------------------------------------TTCCEEEEEECCCCCC
T ss_pred             hhccc-----------------------------------------------------------cCCCcceeeecccccC
Confidence            55431                                                           123444444444433 


Q ss_pred             ----ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccCCCCCCccccCC
Q psy9256         200 ----QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVGAPYSGSYTDHL  265 (265)
Q Consensus       200 ----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~~~~~~~Y~asK  265 (265)
                          ...++.+.+.++|.+.+++|+.+.+...+.+.+.+.    .+.+++++|..+..+.|++..|++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~s~~~~~~~p~~~~y~~sK  164 (268)
T d2h7ma1          99 QTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN----PGGSIVGMDFDPSRAMPAYNWMTVAK  164 (268)
T ss_dssp             GGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE----EEEEEEEEECCCSSCCTTTHHHHHHH
T ss_pred             ccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc----cccccccccccccccCcccchhhccc
Confidence                223567788899999999999999999998888753    24566677778888889999999886

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.74  E-value=3.4e-20  Score=152.13  Aligned_cols=86  Identities=10%  Similarity=0.092  Sum_probs=67.8

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ....+++||+++||||++|||+++|++|+++|++|++++|++++++++.+.+.+..    +..+..+|+++.+++.+.  
T Consensus        16 ~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~--   89 (191)
T d1luaa1          16 AAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF----KVNVTAAETADDASRAEA--   89 (191)
T ss_dssp             HTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH----TCCCEEEECCSHHHHHHH--
T ss_pred             HcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc----chhhhhhhcccHHHHHHH--
Confidence            34578999999999999999999999999999999999999999988888776543    344577888887665544  


Q ss_pred             HHHHHhCCccEEEeCCC
Q psy9256         119 AVIQQFGCLDILINNAG  135 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg  135 (265)
                           ++++|++|||||
T Consensus        90 -----~~~iDilin~Ag  101 (191)
T d1luaa1          90 -----VKGAHFVFTAGA  101 (191)
T ss_dssp             -----TTTCSEEEECCC
T ss_pred             -----hcCcCeeeecCc
Confidence                 344455555544

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.58  E-value=2.4e-15  Score=127.40  Aligned_cols=102  Identities=19%  Similarity=0.249  Sum_probs=72.8

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |++|||||++|||+++|++|+++|++|++++|++++                    ..+|+++.+..+..          
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~~~~~~~~~----------   51 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLSTAEGRKQA----------   51 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTTSHHHHHHH----------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhcCHHHHHHH----------
Confidence            799999999999999999999999999999987542                    23567766655544          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHH-hhcccccEEEeccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVI-QQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~-~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                          ..+.. +..+++|+++||||+...    
T Consensus        52 ----------------------------------------------------~~~~~~~~~~~id~lv~~Ag~~~~----   75 (257)
T d1fjha_          52 ----------------------------------------------------IADVLAKCSKGMDGLVLCAGLGPQ----   75 (257)
T ss_dssp             ----------------------------------------------------HHHHHTTCTTCCSEEEECCCCCTT----
T ss_pred             ----------------------------------------------------HHHHHHHhCCCCcEEEEcCCCCCc----
Confidence                                                                22222 233456777777664321    


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhh
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAR  237 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~  237 (265)
                         .+.|.....+|..+...+.+...|.+.+.
T Consensus        76 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (257)
T d1fjha_          76 ---TKVLGNVVSVNYFGATELMDAFLPALKKG  104 (257)
T ss_dssp             ---CSSHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence               24466677778888888888777776554

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.17  E-value=8.5e-11  Score=103.72  Aligned_cols=131  Identities=21%  Similarity=0.166  Sum_probs=82.9

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcH--HHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL--ERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      |+||||||+|=||..++++|.+.|+.|+.++|.....  +++.....+......++.++.+|++|.+++.+.        
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--------   73 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRI--------   73 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHH--------
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHH--------
Confidence            7899999999999999999999999999999864322  222221111112234566666666666665555        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            ++..     .+|+++|.|+.....  
T Consensus        74 ------------------------------------------------------~~~~-----~~d~v~h~aa~~~~~--   92 (357)
T d1db3a_          74 ------------------------------------------------------LREV-----QPDEVYNLGAMSHVA--   92 (357)
T ss_dssp             ------------------------------------------------------HHHH-----CCSEEEECCCCCTTT--
T ss_pred             ------------------------------------------------------Hhcc-----CCCEEEEeecccccc--
Confidence                                                                  4432     578888888865432  


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                        .+.++.++.+++|+.|+.+++.++...=.+  +..++|++||.+
T Consensus        93 --~~~~~~~~~~~~Nv~gt~nllea~~~~~~~--~~~r~i~~SS~~  134 (357)
T d1db3a_          93 --VSFESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQASTSE  134 (357)
T ss_dssp             --TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGG
T ss_pred             --hhhhCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEEchh
Confidence              122445667899999999998876543221  135799999865

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.8e-10  Score=93.87  Aligned_cols=77  Identities=23%  Similarity=0.214  Sum_probs=58.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      |..|.++||||++.||.+++++|+++|++|.+..|++++++..         ...++.++.+|++|++++.+.       
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~---------~~~~~~~~~gD~~d~~~l~~a-------   64 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---------GPRPAHVVVGDVLQAADVDKT-------   64 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---------SCCCSEEEESCTTSHHHHHHH-------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc---------cccccccccccccchhhHHHH-------
Confidence            4567899999999999999999999999999999987765322         124577888999998775544       


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                      +.+.|++|+++|.
T Consensus        65 l~~~d~vi~~~g~   77 (205)
T d1hdoa_          65 VAGQDAVIVLLGT   77 (205)
T ss_dssp             HTTCSEEEECCCC
T ss_pred             hcCCCEEEEEecc
Confidence            2334555555553

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.04  E-value=1.4e-09  Score=96.61  Aligned_cols=148  Identities=16%  Similarity=0.111  Sum_probs=82.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |+.++||||+|=||..++++|+++|++|+.++.-........   ....           ++....+........     
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~---~~~~-----------~~~~~~~~~~~~~~~-----   61 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQ---LGLE-----------SLTPIASIHDRISRW-----   61 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHH---HTCC-----------CSSCCCCHHHHHHHH-----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCccccccc---cccc-----------ccccccchHHHHHHH-----
Confidence            688999999999999999999999999999862100000000   0000           000000000000000     


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                   .......+..+..|++|.+.++++++..     ++|+++|.|+.... +..
T Consensus        62 -----------------------------~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~d~ViHlAa~~~~-~~s  106 (393)
T d1i24a_          62 -----------------------------KALTGKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRSA-PYS  106 (393)
T ss_dssp             -----------------------------HHHHCCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCCH-HHH
T ss_pred             -----------------------------HhhcCCCcEEEEccCCCHHHHHHHHHhh-----cchheecccccccc-ccc
Confidence                                         0001123344445555555555445543     68889998875422 122


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                      ..+++.....+++|+.|+..+...+...    +...++++.||.+.
T Consensus       107 ~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~~i~~ss~~~  148 (393)
T d1i24a_         107 MIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGE  148 (393)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGG
T ss_pred             cccccccccccccccccccHHHHHHHHh----ccccceeecccccc
Confidence            3445666788999999999888866432    32356777776544

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.03  E-value=5.9e-10  Score=97.48  Aligned_cols=127  Identities=20%  Similarity=0.262  Sum_probs=85.5

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      |++|||||+|=||..++++|+++|++|+++++... ..+.....-...   ..++.++.+|++|.+.++.+         
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~---------   69 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT---KHHIPFYEVDLCDRKGLEKV---------   69 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH---TSCCCEEECCTTCHHHHHHH---------
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc---ccCCeEEEeecCCHHHHHHH---------
Confidence            68999999999999999999999999999876322 222222221111   24566777788877766555         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++.     ..+|+++|.|+......  
T Consensus        70 -----------------------------------------------------~~~-----~~~d~VihlAa~~~~~~--   89 (347)
T d1z45a2          70 -----------------------------------------------------FKE-----YKIDSVIHFAGLKAVGE--   89 (347)
T ss_dssp             -----------------------------------------------------HHH-----SCCCEEEECCSCCCHHH--
T ss_pred             -----------------------------------------------------Hhc-----cCCCEEEEccccccccc--
Confidence                                                                 221     25788888887543221  


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                        ..++-.....+|+.++..+..++..    .+ -.++|++||....
T Consensus        90 --~~~~~~~~~~~N~~~t~~ll~~~~~----~~-i~~~i~~SS~~vy  129 (347)
T d1z45a2          90 --STQIPLRYYHNNILGTVVLLELMQQ----YN-VSKFVFSSSATVY  129 (347)
T ss_dssp             --HHHSHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGG
T ss_pred             --cccCcccccccchhhhHHHHHHHHh----cc-cceEEeecceeee
Confidence              1233356788999999998887643    22 3589999996544

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.98  E-value=3.7e-09  Score=92.00  Aligned_cols=127  Identities=18%  Similarity=0.191  Sum_probs=87.6

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCcc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLD  128 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ld  128 (265)
                      +|||||+|=||..++++|+++|++|+.++|................  ..++.++++|++|.+.+.++            
T Consensus         3 iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~------------   68 (338)
T d1udca_           3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEI------------   68 (338)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHH------------
T ss_pred             EEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHH------------
Confidence            8999999999999999999999999999874433322222222221  24677788888887776555            


Q ss_pred             EEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccccc
Q psy9256         129 ILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE  208 (265)
Q Consensus       129 ilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~  208 (265)
                                                                        ++.     .++|+++|.|+.....    .+
T Consensus        69 --------------------------------------------------~~~-----~~~d~ViHlAa~~~~~----~~   89 (338)
T d1udca_          69 --------------------------------------------------LHD-----HAIDTVIHFAGLKAVG----ES   89 (338)
T ss_dssp             --------------------------------------------------HHH-----TTCSEEEECCSCCCHH----HH
T ss_pred             --------------------------------------------------Hhc-----cCCCEEEECCCccchh----hH
Confidence                                                              322     2478888888753221    22


Q ss_pred             hHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         209 LEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       209 ~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      .++-++.+++|+.|+..++.++...    + -.++|+.||.+...
T Consensus        90 ~~~~~~~~~~Nv~gt~nlL~~~~~~----~-v~~~i~~Ss~~vy~  129 (338)
T d1udca_          90 VQKPLEYYDNNVNGTLRLISAMRAA----N-VKNFIFSSSATVYG  129 (338)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGC
T ss_pred             HhCHHHHHHhHHHHHHHHHHHHHHh----C-CCEEEecCcceEEc
Confidence            3345678999999999988866543    2 36888888876543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.97  E-value=1.2e-09  Score=95.50  Aligned_cols=127  Identities=18%  Similarity=0.090  Sum_probs=87.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +||+|+||||+|=||..++++|.++|++|+.+.|+.++...+........ .......+..|+++.+++..+        
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~--------   80 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEV--------   80 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTT--------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccc-cccccEEEeccccchhhhhhh--------
Confidence            48999999999889999999999999999999998776666555443332 223344566677776553332        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                                   ....|+++++++....   
T Consensus        81 -------------------------------------------------------------~~~~~~v~~~a~~~~~---   96 (342)
T d1y1pa1          81 -------------------------------------------------------------IKGAAGVAHIASVVSF---   96 (342)
T ss_dssp             -------------------------------------------------------------TTTCSEEEECCCCCSC---
T ss_pred             -------------------------------------------------------------cccchhhhhhcccccc---
Confidence                                                                         1246778887775321   


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                       .   .+....+.+|+.|+..+++.+...    +...++|++||.++.
T Consensus        97 -~---~~~~~~~~~nv~gt~~ll~~~~~~----~~v~~~i~~SS~~~~  136 (342)
T d1y1pa1          97 -S---NKYDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSA  136 (342)
T ss_dssp             -C---SCHHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGT
T ss_pred             -c---ccccccccchhhhHHHHHHhhhcc----cccccccccccceee
Confidence             1   223456778999988877765442    224789999997654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.8e-09  Score=93.89  Aligned_cols=129  Identities=17%  Similarity=0.091  Sum_probs=82.3

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc-----HHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN-----LERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      |+||||||+|=||..++++|.++|++|+.++|..+.     ++.+.......  ...++.++.+|++|++.+..+     
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~-----   74 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH--IEGNMKLHYGDLTDSTCLVKI-----   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTTCHHHHHHH-----
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh--ccCCcEEEEeecCCchhhHHH-----
Confidence            556999999999999999999999999999996542     22211111110  124566777777777766555     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++.     ...+++++.++....
T Consensus        75 ---------------------------------------------------------~~~-----~~~~~v~~~~a~~~~   92 (347)
T d1t2aa_          75 ---------------------------------------------------------INE-----VKPTEIYNLGAQSHV   92 (347)
T ss_dssp             ---------------------------------------------------------HHH-----HCCSEEEECCSCCCH
T ss_pred             ---------------------------------------------------------Hhh-----cccceeeeeeecccc
Confidence                                                                     322     245666766664322


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      .    ...++....+++|+.|+..+...+...-...  ..++|++||.+
T Consensus        93 ~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~--~~~~i~~SS~~  135 (347)
T d1t2aa_          93 K----ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN--SVKFYQASTSE  135 (347)
T ss_dssp             H----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGG
T ss_pred             c----hhhccchhhhhhHHHHHHHHHHHHHHcCCCC--CcEEEEecchh
Confidence            2    2223345568999999999888765543221  35799999865

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=98.93  E-value=5.2e-09  Score=91.10  Aligned_cols=114  Identities=15%  Similarity=0.136  Sum_probs=83.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .+||.+|||||+|=||..+++.|.++|++|+.++|+.+......+...    ....+.++.+|++|++.+..+       
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~----~~~~i~~~~~Dl~d~~~l~~~-------   74 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIGDIRDQNKLLES-------   74 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT----TTTTSEEEECCTTCHHHHHHH-------
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh----cccCCeEEEeeccChHhhhhh-------
Confidence            578999999999999999999999999999999998776654433221    124577788888887765555       


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  203 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~  203 (265)
                                                                             ++.     ..+|++++.|+..... 
T Consensus        75 -------------------------------------------------------~~~-----~~~~~v~~~aa~~~~~-   93 (356)
T d1rkxa_          75 -------------------------------------------------------IRE-----FQPEIVFHMAAQPLVR-   93 (356)
T ss_dssp             -------------------------------------------------------HHH-----HCCSEEEECCSCCCHH-
T ss_pred             -------------------------------------------------------hhh-----chhhhhhhhhcccccc-
Confidence                                                                   222     2577788877754222 


Q ss_pred             ccccchHHHHhhhhhhhhHHHHHHHHHHH
Q psy9256         204 WEDIELEVDRELFELNVFSVLSLSRIATS  232 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~p  232 (265)
                         .+.++.+..+++|+.|+..+..++..
T Consensus        94 ---~~~~~~~~~~~~Nv~g~~n~l~~~~~  119 (356)
T d1rkxa_          94 ---LSYSEPVETYSTNVMGTVYLLEAIRH  119 (356)
T ss_dssp             ---HHHHCHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ---ccccCCccccccccccchhhhhhhhc
Confidence               22344567889999999988887654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.93  E-value=2.6e-09  Score=92.48  Aligned_cols=131  Identities=20%  Similarity=0.106  Sum_probs=83.3

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC-----cHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSS-----NLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      |++|||||+|=||..+++.|.++|+.|+.++|..+     +.+.........  ......++.+|+++.+++...     
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~~~~~~-----   74 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRW-----   74 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHH-----
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc--cccceEEEEccccCHHHHHHH-----
Confidence            78999999999999999999999999999998543     222221111111  124556666777776655544     


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR  201 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~  201 (265)
                                                                               ++.     .++|+++|.|+....
T Consensus        75 ---------------------------------------------------------~~~-----~~~D~Vih~Aa~~~~   92 (339)
T d1n7ha_          75 ---------------------------------------------------------IDV-----IKPDEVYNLAAQSHV   92 (339)
T ss_dssp             ---------------------------------------------------------HHH-----HCCSEEEECCSCCCH
T ss_pred             ---------------------------------------------------------Hhh-----hccchhhhccccccc
Confidence                                                                     332     267888888885433


Q ss_pred             ccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         202 AAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       202 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      .    ...++-...+++|+.+...+...+...-.......+++..||..
T Consensus        93 ~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~  137 (339)
T d1n7ha_          93 A----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE  137 (339)
T ss_dssp             H----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG
T ss_pred             c----ccccCccccccccccccchhhhhhhhcccccccceeeeecccce
Confidence            2    12234466788899999988887765544433234555555543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.90  E-value=1.5e-08  Score=87.02  Aligned_cols=126  Identities=19%  Similarity=0.155  Sum_probs=83.0

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHH-HHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE-RVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      +|||||+|=||..++++|.++|++|+.+++-..... .-...+..    ..++.++.+|++|.+++..+           
T Consensus         3 ILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~----~~~~~~i~~Di~~~~~l~~~-----------   67 (338)
T d1orra_           3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS----LGNFEFVHGDIRNKNDVTRL-----------   67 (338)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT----TCCCEEEECCTTCHHHHHHH-----------
T ss_pred             EEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc----cCCcEEEEcccCCHHHHHHH-----------
Confidence            799999999999999999999999998875322211 11111111    24677788888887776655           


Q ss_pred             cEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         128 DILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       128 dilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                                                                         ++..     ++|+++|.|+.....    .
T Consensus        68 ---------------------------------------------------~~~~-----~~d~Vih~aa~~~~~----~   87 (338)
T d1orra_          68 ---------------------------------------------------ITKY-----MPDSCFHLAGQVAMT----T   87 (338)
T ss_dssp             ---------------------------------------------------HHHH-----CCSEEEECCCCCCHH----H
T ss_pred             ---------------------------------------------------HHhc-----CCceEEeeccccccc----c
Confidence                                                               3222     478888888764332    2


Q ss_pred             chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccccC
Q psy9256         208 ELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIVG  254 (265)
Q Consensus       208 ~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~~  254 (265)
                      ..++....+++|+.|+.+++..+...    + ..+.++.||.....+
T Consensus        88 ~~~~~~~~~~~Nv~gt~nll~~~~~~----~-~~~~i~~sS~~~~~~  129 (338)
T d1orra_          88 SIDNPCMDFEINVGGTLNLLEAVRQY----N-SNCNIIYSSTNKVYG  129 (338)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHH----C-TTCEEEEEEEGGGGT
T ss_pred             cccChHHHHHHHHHHHHHHHHhhhcc----c-ccccccccccccccc
Confidence            22345788999999999988865442    2 345555566554443

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.87  E-value=2.1e-09  Score=94.83  Aligned_cols=131  Identities=16%  Similarity=0.143  Sum_probs=84.7

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEE-EecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVL-SARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      .+|||||+|=||..++++|++.|+.|++ +++..... .. ..+.... ...++.++.+|++|.+.+..+          
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~-~~-~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~----------   68 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-NL-ESLSDIS-ESNRYNFEHADICDSAEITRI----------   68 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC-CG-GGGTTTT-TCTTEEEEECCTTCHHHHHHH----------
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccc-cH-HHHHhhh-hcCCcEEEEccCCCHHHHHHH----------
Confidence            4899999999999999999999998554 44322111 00 1111111 134677777788877766555          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          ++..     .+|+++|.|+.....    
T Consensus        69 ----------------------------------------------------~~~~-----~~d~VihlAa~~~~~----   87 (361)
T d1kewa_          69 ----------------------------------------------------FEQY-----QPDAVMHLAAESHVD----   87 (361)
T ss_dssp             ----------------------------------------------------HHHH-----CCSEEEECCSCCCHH----
T ss_pred             ----------------------------------------------------HHhC-----CCCEEEECccccchh----
Confidence                                                                3221     578888888754321    


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhh----cCCceEEEEcccccc
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAR----EQGGHLVVTSSIAGI  252 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~----~~~g~IV~isS~ag~  252 (265)
                      .+.++-...+++|+.|...+.+.+...-.+.    ....++|++||.+-.
T Consensus        88 ~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vy  137 (361)
T d1kewa_          88 RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVY  137 (361)
T ss_dssp             HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGG
T ss_pred             hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceee
Confidence            1223345688999999999999887764321    113689999996643

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.82  E-value=1.2e-08  Score=88.68  Aligned_cols=130  Identities=15%  Similarity=0.062  Sum_probs=85.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCC--CCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGA--HPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .-|++|||||+|-||..++++|.+.|++|+.++|....-.+..........  ......++..|..|.......      
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~------   88 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA------   88 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH------
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccc------
Confidence            458899999999999999999999999999998743322222221111110  123566777777776543322      


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA  202 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~  202 (265)
                                                                                     ....+.+++.++.....
T Consensus        89 ---------------------------------------------------------------~~~~~~v~~~~a~~~~~  105 (341)
T d1sb8a_          89 ---------------------------------------------------------------CAGVDYVLHQAALGSVP  105 (341)
T ss_dssp             ---------------------------------------------------------------HTTCSEEEECCSCCCHH
T ss_pred             ---------------------------------------------------------------ccccccccccccccccc
Confidence                                                                           23456666665533221


Q ss_pred             cccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         203 AWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       203 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                          .+.++....+++|+.|+..+..++...    + ..++|++||.+-.
T Consensus       106 ----~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-~~~~i~~SS~~vy  146 (341)
T d1sb8a_         106 ----RSINDPITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTY  146 (341)
T ss_dssp             ----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGG
T ss_pred             ----ccccCccchhheeehhHHHHHHHHHhc----C-CceEEEcccceee
Confidence                234566778999999999998866542    2 4689999997644

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.80  E-value=2.3e-08  Score=85.68  Aligned_cols=67  Identities=19%  Similarity=0.084  Sum_probs=50.2

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      |.||||||+|=||..++++|.++|++|+.++|..+....  ..+.... ..+++.++.+|++|.+++...
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~--~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~   67 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELG-IEGDIQYEDGDMADACSVQRA   67 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTT-CGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccH--HHHHHhc-ccCCcEEEEccccChHHhhhh
Confidence            689999999999999999999999999999987543221  1122222 225678888888888776655

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=3.7e-09  Score=87.50  Aligned_cols=122  Identities=19%  Similarity=0.181  Sum_probs=81.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      +.|++|.++||||+|-||..++++|.++|.  +|++.+|++.....-.         ...+....+|+.+.+++      
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~---------~~~i~~~~~D~~~~~~~------   74 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---------YKNVNQEVVDFEKLDDY------   74 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---------GGGCEEEECCGGGGGGG------
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc---------cceeeeeeecccccccc------
Confidence            457889999999999999999999999995  7999999765432210         12344445555554332      


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                     .+.+...|++++++|..
T Consensus        75 ---------------------------------------------------------------~~~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          75 ---------------------------------------------------------------ASAFQGHDVGFCCLGTT   91 (232)
T ss_dssp             ---------------------------------------------------------------GGGGSSCSEEEECCCCC
T ss_pred             ---------------------------------------------------------------ccccccccccccccccc
Confidence                                                                           22334577888877743


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      .       ...+..+..++|+.++..+++.+..    .+ -.++|++||.....
T Consensus        92 ~-------~~~~~~~~~~~~~~~~~~~~~~a~~----~~-v~~fi~~Ss~~~~~  133 (232)
T d2bkaa1          92 R-------GKAGAEGFVRVDRDYVLKSAELAKA----GG-CKHFNLLSSKGADK  133 (232)
T ss_dssp             H-------HHHHHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCCT
T ss_pred             c-------cccchhhhhhhcccccceeeecccc----cC-ccccccCCcccccc
Confidence            1       1233455667788888887776533    22 46889999876543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.78  E-value=1.2e-08  Score=82.79  Aligned_cols=73  Identities=22%  Similarity=0.207  Sum_probs=52.0

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCe--EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAK--LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ++++||||+|.||.+++++|+++|+.  |+...|+++..+.       .   ..++.++.+|.++.++..++       +
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-------~---~~~~~~~~~d~~~~~~~~~~-------~   66 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-------I---GGEADVFIGDITDADSINPA-------F   66 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-------T---TCCTTEEECCTTSHHHHHHH-------H
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-------c---cCCcEEEEeeeccccccccc-------c
Confidence            58999999999999999999999976  4555665543221       1   24567788999988776554       2


Q ss_pred             CCccEEEeCCCC
Q psy9256         125 GCLDILINNAGR  136 (265)
Q Consensus       125 g~ldilinnAg~  136 (265)
                      ...|.+||+|+.
T Consensus        67 ~~~d~vi~~a~~   78 (252)
T d2q46a1          67 QGIDALVILTSA   78 (252)
T ss_dssp             TTCSEEEECCCC
T ss_pred             ccceeeEEEEee
Confidence            345666666654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.74  E-value=1.4e-08  Score=88.09  Aligned_cols=119  Identities=15%  Similarity=0.099  Sum_probs=80.5

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          48 VVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      .+|||||+|=||..++++|+++| +.|+.+++..+...+..+        ..++.++.+|+++.+.+.+.          
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~--------~~~~~~i~~Di~~~~~~~~~----------   63 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--------HPHFHFVEGDISIHSEWIEY----------   63 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--------CTTEEEEECCTTTCSHHHHH----------
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc--------CCCeEEEECccCChHHHHHH----------
Confidence            38999999999999999999998 579888876554433221        25688888888876543322          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                             ..   ..+|+++|.|+......   
T Consensus        64 -------------------------------------------------------~~---~~~d~Vih~a~~~~~~~---   82 (342)
T d2blla1          64 -------------------------------------------------------HV---KKCDVVLPLVAIATPIE---   82 (342)
T ss_dssp             -------------------------------------------------------HH---HHCSEEEECBCCCCHHH---
T ss_pred             -------------------------------------------------------HH---hCCCccccccccccccc---
Confidence                                                                   11   24788888888643321   


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                       ..++-.+.+++|+.|+..+...+..    .  +-+.++.||....
T Consensus        83 -~~~~~~~~~~~nv~gt~~ll~~~~~----~--~~~~~~~ss~~~~  121 (342)
T d2blla1          83 -YTRNPLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVY  121 (342)
T ss_dssp             -HHHSHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGG
T ss_pred             -cccCCcccccccccccccccccccc----c--ccccccccccccc
Confidence             1233456788999999998887533    2  2455666665543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=1.5e-07  Score=81.51  Aligned_cols=129  Identities=19%  Similarity=0.190  Sum_probs=85.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEec------CCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSAR------SSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      |.+|||||+|=||.+++++|++.|..|+.+++      +........+......  ..++.++.+|++|.+.+...    
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~----   76 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRL----   76 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHH----
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc--CCCcEEEEeecccccccccc----
Confidence            56899999999999999999999999999864      2222222223232222  24677788888887776655    


Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ  200 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~  200 (265)
                                                                                +..     ...++++|.|+...
T Consensus        77 ----------------------------------------------------------~~~-----~~~~~i~h~Aa~~~   93 (346)
T d1ek6a_          77 ----------------------------------------------------------FKK-----YSFMAVIHFAGLKA   93 (346)
T ss_dssp             ----------------------------------------------------------HHH-----CCEEEEEECCSCCC
T ss_pred             ----------------------------------------------------------ccc-----cccccccccccccC
Confidence                                                                      221     35677778877543


Q ss_pred             cccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         201 RAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      ..    .+.++-.+.+++|+.+...+..++..    .+ -.++++.||..-..
T Consensus        94 ~~----~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~-v~~~i~~ss~~~~~  137 (346)
T d1ek6a_          94 VG----ESVQKPLDYYRVNLTGTIQLLEIMKA----HG-VKNLVFSSSATVYG  137 (346)
T ss_dssp             HH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGGC
T ss_pred             cH----hhHhCHHHHHHhhhcccccccchhhh----cC-cccccccccceeee
Confidence            22    12233456789999999888776533    22 35788888765443

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.62  E-value=5.1e-08  Score=83.36  Aligned_cols=110  Identities=15%  Similarity=0.159  Sum_probs=75.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      .|.+|||||+|=||..++++|+++|..|++++++.                       .+|+++.+.+..+         
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------------~~~~~~~~~~~~~---------   49 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDF---------   49 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHH---------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------------hccccCHHHHHHH---------
Confidence            36799999999999999999999999987765422                       1467776665554         


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccc
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE  205 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~  205 (265)
                                                                           ++.     ..+|.+++.|+......  
T Consensus        50 -----------------------------------------------------~~~-----~~~d~v~~~a~~~~~~~--   69 (315)
T d1e6ua_          50 -----------------------------------------------------FAS-----ERIDQVYLAAAKVGGIV--   69 (315)
T ss_dssp             -----------------------------------------------------HHH-----HCCSEEEECCCCCCCHH--
T ss_pred             -----------------------------------------------------Hhh-----cCCCEEEEcchhccccc--
Confidence                                                                 221     24677777765432211  


Q ss_pred             ccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         206 DIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       206 ~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                       ....+..+.+++|+.++..++.++...    + -.++|++||.+..-
T Consensus        70 -~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-v~~~i~~SS~~vyg  111 (315)
T d1e6ua_          70 -ANNTYPADFIYQNMMIESNIIHAAHQN----D-VNKLLFLGSSCIYP  111 (315)
T ss_dssp             -HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGSC
T ss_pred             -cchhhHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEECCceEcC
Confidence             122344566888999999988866442    2 36899999977543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.58  E-value=3.7e-07  Score=80.28  Aligned_cols=131  Identities=16%  Similarity=0.176  Sum_probs=80.3

Q ss_pred             cEEEEcCCCCchhHHHHHHHHH-cCCeEEEEec---------CCCcHHHHHHHHHHhCC-----CCCcEEEEeecCCChH
Q psy9256          47 KVVWITGASSGIGEALALQLSK-CGAKLVLSAR---------SSSNLERVKNLCVQAGA-----HPQSIYTLTLDVTQTK  111 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~-~G~~V~~~~r---------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~  111 (265)
                      ..+|||||+|=||..++++|++ .|++|+++++         ..+..+.....+.....     ...+..++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            4589999999999999999986 6899999874         12223333332222110     1223445555666555


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccE
Q psy9256         112 YHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDI  191 (265)
Q Consensus       112 ~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldi  191 (265)
                      .++++                                                              +    +....+|+
T Consensus        83 ~l~~~--------------------------------------------------------------~----~~~~~~d~   96 (383)
T d1gy8a_          83 FLNGV--------------------------------------------------------------F----TRHGPIDA   96 (383)
T ss_dssp             HHHHH--------------------------------------------------------------H----HHSCCCCE
T ss_pred             Hhhhh--------------------------------------------------------------h----hccceeeh
Confidence            43333                                                              4    33456788


Q ss_pred             EEecccccccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEcccccc
Q psy9256         192 LINNAGRSQRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGI  252 (265)
Q Consensus       192 lVnnAG~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~  252 (265)
                      ++|.|+......    ..++....+++|+.+...+...+...    + ..++++.+|....
T Consensus        97 ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~~~~----~-~~~~~~~~s~~~~  148 (383)
T d1gy8a_          97 VVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLLH----K-CDKIIFSSSAAIF  148 (383)
T ss_dssp             EEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGT
T ss_pred             hhcccccccccc----cccccccccccccccccccchhhhcc----C-Ccccccccccccc
Confidence            888888654322    12334567788999999888766542    2 3566666665443

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.58  E-value=3.4e-08  Score=85.95  Aligned_cols=124  Identities=13%  Similarity=0.092  Sum_probs=76.1

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGC  126 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  126 (265)
                      |.+|||||+|=||..++++|.+.|+.|.+++++...-..-...+...  ...++.++.+|++|.+.+..+          
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~----------   70 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKL----------   70 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHH----------
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHH----------
Confidence            56999999999999999999999987665554321100000000011  124667777777776655444          


Q ss_pred             ccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccc
Q psy9256         127 LDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWED  206 (265)
Q Consensus       127 ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~  206 (265)
                                                                          +       ...|.+++.|+.......  
T Consensus        71 ----------------------------------------------------~-------~~~~~v~~~a~~~~~~~~--   89 (346)
T d1oc2a_          71 ----------------------------------------------------A-------AKADAIVHYAAESHNDNS--   89 (346)
T ss_dssp             ----------------------------------------------------H-------TTCSEEEECCSCCCHHHH--
T ss_pred             ----------------------------------------------------H-------hhhhhhhhhhhcccccch--
Confidence                                                                1       235556677665433211  


Q ss_pred             cchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccc
Q psy9256         207 IELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAG  251 (265)
Q Consensus       207 ~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag  251 (265)
                        .++.++.+++|+.|...++......      +.++|++||.+.
T Consensus        90 --~~~~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~v  126 (346)
T d1oc2a_          90 --LNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEV  126 (346)
T ss_dssp             --HHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGG
T ss_pred             --hhCcccceeeehHhHHhhhhhhccc------cccccccccceE
Confidence              1234577899999999988755332      246777776643

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=6.2e-08  Score=83.29  Aligned_cols=33  Identities=24%  Similarity=0.300  Sum_probs=30.7

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARS   79 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~   79 (265)
                      |.++||||+|=||..++++|.++|++|+.++|.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~   34 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF   34 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence            679999999999999999999999999998863

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.50  E-value=1.3e-07  Score=82.57  Aligned_cols=123  Identities=15%  Similarity=0.018  Sum_probs=80.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +++.++||||+|=||..++++|.++|..|+.+++........         ......+...|+.+.+.+..+        
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~--------   76 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE---------DMFCDEFHLVDLRVMENCLKV--------   76 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG---------GGTCSEEEECCTTSHHHHHHH--------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh---------hcccCcEEEeechhHHHHHHH--------
Confidence            345699999999999999999999999999988654321000         012234455666665443322        


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAW  204 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~  204 (265)
                                                                            +       ..+|.++|.|+...... 
T Consensus        77 ------------------------------------------------------~-------~~~d~Vih~a~~~~~~~-   94 (363)
T d2c5aa1          77 ------------------------------------------------------T-------EGVDHVFNLAADMGGMG-   94 (363)
T ss_dssp             ------------------------------------------------------H-------TTCSEEEECCCCCCCHH-
T ss_pred             ------------------------------------------------------h-------hcCCeEeeccccccccc-
Confidence                                                                  1       25678888776543321 


Q ss_pred             cccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         205 EDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       205 ~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                        .+.+...+.+.+|+.++..++.++...    + -.++|++||.+...
T Consensus        95 --~~~~~~~~~~~~n~~gt~~ll~~~~~~----~-vk~~i~~SS~~~~~  136 (363)
T d2c5aa1          95 --FIQSNHSVIMYNNTMISFNMIEAARIN----G-IKRFFYASSACIYP  136 (363)
T ss_dssp             --HHTTCHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEEEEGGGSC
T ss_pred             --ccccccccccccccchhhHHHHhHHhh----C-cccccccccccccc
Confidence              223445677888999998888766443    2 46899999976543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.45  E-value=2.3e-10  Score=90.93  Aligned_cols=46  Identities=24%  Similarity=0.399  Sum_probs=40.6

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhC
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG   94 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~   94 (265)
                      +.|+||+++||.++|++|+++|++|++.+|++++++++.+++.+..
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            5566877899999999999999999999999999998888877654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.34  E-value=2.5e-07  Score=79.46  Aligned_cols=123  Identities=17%  Similarity=0.100  Sum_probs=77.6

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEE------ecC--CCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLS------ARS--SSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~------~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .++||||+|=||..++++|.++|+.|...      ++.  ......    +.... ...++.++..|.++.......   
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~----~~~~~-~~~~~~~~~~d~~~~~~~~~~---   73 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN----LAPVD-ADPRLRFVHGDIRDAGLLARE---   73 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG----GGGGT-TCTTEEEEECCTTCHHHHHHH---
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhH----hhhhh-cCCCeEEEEeccccchhhhcc---
Confidence            38999999999999999999999765433      221  111111    11111 124566777777776543322   


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccc
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRS  199 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~  199 (265)
                                                                                        ....|.++|.|+..
T Consensus        74 ------------------------------------------------------------------~~~~d~vi~~a~~~   87 (322)
T d1r6da_          74 ------------------------------------------------------------------LRGVDAIVHFAAES   87 (322)
T ss_dssp             ------------------------------------------------------------------TTTCCEEEECCSCC
T ss_pred             ------------------------------------------------------------------ccccceEEeecccc
Confidence                                                                              23567777777654


Q ss_pred             ccccccccchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcCCceEEEEccccccc
Q psy9256         200 QRAAWEDIELEVDRELFELNVFSVLSLSRIATSYFLAREQGGHLVVTSSIAGIV  253 (265)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~p~l~~~~~~g~IV~isS~ag~~  253 (265)
                      ...    ...++.++.+++|+.++..+...+..    .+ ..++|+.||.+..-
T Consensus        88 ~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~----~~-~~~~I~~Ss~~~yg  132 (322)
T d1r6da_          88 HVD----RSIAGASVFTETNVQGTQTLLQCAVD----AG-VGRVVHVSTNQVYG  132 (322)
T ss_dssp             CHH----HHHHCCHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEEEEGGGGC
T ss_pred             ccc----ccccchHHHhhhhHHHHHHHHHHHHH----cC-CceEEEeecceeec
Confidence            222    22344566788999999998887643    22 46899999876543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.18  E-value=6.3e-06  Score=68.36  Aligned_cols=32  Identities=22%  Similarity=0.349  Sum_probs=29.7

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecC
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARS   79 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~   79 (265)
                      .++||||+|-||..++++|.++|++|+.++|+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            38999999999999999999999999998874

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.14  E-value=3.6e-06  Score=70.20  Aligned_cols=30  Identities=17%  Similarity=0.257  Sum_probs=25.0

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecC
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARS   79 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~   79 (265)
                      +|||||+|=||.++++.|.+.|..| .++++
T Consensus         3 ILItG~tGfiG~~l~~~L~~~g~~v-~~~~~   32 (298)
T d1n2sa_           3 ILLFGKTGQVGWELQRSLAPVGNLI-ALDVH   32 (298)
T ss_dssp             EEEECTTSHHHHHHHHHTTTTSEEE-EECTT
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEE-EEECC
Confidence            8999999999999999999988544 44443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.07  E-value=1.3e-05  Score=67.12  Aligned_cols=82  Identities=11%  Similarity=0.068  Sum_probs=60.1

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHH-HHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERV-KNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +.++||||+|-||..++++|.+.|++|+++.|+....... .+.+....  ...+.++.+|++|.+++.+.       +.
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~-------~~   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDA-------LK   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHH-------HT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhh-------cc
Confidence            3489999999999999999999999999999976543221 11222222  24678899999998776654       45


Q ss_pred             CccEEEeCCCCC
Q psy9256         126 CLDILINNAGRS  137 (265)
Q Consensus       126 ~ldilinnAg~~  137 (265)
                      ..+..+++++..
T Consensus        75 ~~~~~~~~~~~~   86 (312)
T d1qyda_          75 QVDVVISALAGG   86 (312)
T ss_dssp             TCSEEEECCCCS
T ss_pred             Ccchhhhhhhhc
Confidence            677888887753

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.05  E-value=2.6e-05  Score=67.13  Aligned_cols=62  Identities=13%  Similarity=0.073  Sum_probs=49.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (265)
                      +.|+++||||++-||..++++|.++|++|.++.|+.++....  .+..    ...+..+..|+.|..+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~~----~~~v~~~~gD~~d~~~   63 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--ELQA----IPNVTLFQGPLLNNVP   63 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--HHHT----STTEEEEESCCTTCHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--hhcc----cCCCEEEEeeCCCcHH
Confidence            468999999999999999999999999999999988765321  1111    2467788999988654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.05  E-value=2.2e-05  Score=66.08  Aligned_cols=61  Identities=23%  Similarity=0.284  Sum_probs=50.9

Q ss_pred             CceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccc-cccccchHHHHhhhhhhh
Q psy9256         160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRA-AWEDIELEVDRELFELNV  220 (265)
Q Consensus       160 ~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~-~~~~~~~~~~~~~~~~N~  220 (265)
                      .++..+.||++++++++++++++.+++|++|++|||||+.... ...+.+.+.+++.++--+
T Consensus        51 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~  112 (276)
T d1bdba_          51 DNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVF  112 (276)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHH
T ss_pred             CCeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHH
Confidence            5688999999999999999999999999999999999987654 455666666777777433

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.03  E-value=4.3e-06  Score=69.50  Aligned_cols=83  Identities=16%  Similarity=0.164  Sum_probs=60.8

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHH--HHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVK--NLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|.++||||+|-||..++++|.++|++|++.+|+........  ..+....  ...+.++..|+.+.++....       
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~-------   73 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEA-------   73 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHH-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhh-------
Confidence            467999999999999999999999999999999765433221  1222222  24577889999998765554       


Q ss_pred             hCCccEEEeCCCCC
Q psy9256         124 FGCLDILINNAGRS  137 (265)
Q Consensus       124 ~g~ldilinnAg~~  137 (265)
                      +...+.+|++++..
T Consensus        74 ~~~~~~vi~~~~~~   87 (307)
T d1qyca_          74 VKNVDVVISTVGSL   87 (307)
T ss_dssp             HHTCSEEEECCCGG
T ss_pred             hhhceeeeeccccc
Confidence            23567888888754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=97.95  E-value=2.2e-05  Score=65.61  Aligned_cols=95  Identities=19%  Similarity=0.104  Sum_probs=59.6

Q ss_pred             CCcEEEEcCCCC-chhHHHHHHHHHc-CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASS-GIGEALALQLSKC-GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~-GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|-.++|++..+ .-..++.+.+... +..++.+.-+....+          ..........+|++++++++++++.+.+
T Consensus        25 ~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~----------~~~~~~~~~~~dv~~~~~v~~~~~~~~~   94 (284)
T d1e7wa_          25 EGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA----------TAPVSGADGSAPVTLFTRCAELVAACYT   94 (284)
T ss_dssp             TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC----------BCCCC----CCCBCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeeccccc----------ccccccccccccCCCHHHHHHHHHHHHH
Confidence            466788877655 3445566666544 444443322211111          1124566788999999999999999999


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHH
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEV  149 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~  149 (265)
                      ++|++|+||||||+.....+.+.+.+.
T Consensus        95 ~~G~iDiLVnnAG~~~~~~~~~~~~~~  121 (284)
T d1e7wa_          95 HWGRCDVLVNNASSFYPTPLLRNDEDG  121 (284)
T ss_dssp             HHSCCCEEEECCCCCCCCCCCC-----
T ss_pred             HhCCCCEEEecCCccCCCchhhCCHHH
Confidence            999999999999998777666554443

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.90  E-value=0.0001  Score=60.96  Aligned_cols=91  Identities=22%  Similarity=0.314  Sum_probs=71.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++=+..-..++++.+.+.|.++....-+-...+.+.+..+..                           .+++
T Consensus        24 ~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~~~   76 (255)
T d1gega_          24 DGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQA---------------------------RKTL   76 (255)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH---------------------------HHHT
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH---------------------------HHHh
Confidence            4777888888777778888889888888776655666665555544322                           3678


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++++..++.|-....
T Consensus        77 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~  114 (255)
T d1gega_          77 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVI  114 (255)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCccEEEecccccccCcHHHhhhhhhhhhhhhcccchh
Confidence            99999999999999999999999999999888876444

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.85  E-value=2.6e-05  Score=62.38  Aligned_cols=35  Identities=29%  Similarity=0.329  Sum_probs=29.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGA--KLVLSARSS   80 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~   80 (265)
                      .|.++||||+|-||..++++|.++|.  .|+...|++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~   38 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   38 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence            47899999999999999999999997  566666653

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.83  E-value=6.1e-05  Score=59.27  Aligned_cols=87  Identities=16%  Similarity=0.203  Sum_probs=65.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .++++|.++|.|+ +|.|++++..|...|+ ++++..|+.+..+++....+....+. .......|..+.+.+..     
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~-----   86 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAE-----   86 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHH-----
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhh-----
Confidence            4789999999999 6999999999999998 58888999998888776655443222 23355678888765433     


Q ss_pred             HHHhCCccEEEeCCCCC
Q psy9256         121 IQQFGCLDILINNAGRS  137 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~  137 (265)
                        .....|++||+....
T Consensus        87 --~~~~~diiIN~Tp~G  101 (182)
T d1vi2a1          87 --ALASADILTNGTKVG  101 (182)
T ss_dssp             --HHHTCSEEEECSSTT
T ss_pred             --hhcccceeccccCCc
Confidence              346779999998764

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.75  E-value=0.00018  Score=59.16  Aligned_cols=86  Identities=13%  Similarity=0.004  Sum_probs=52.1

Q ss_pred             EEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccc----cChhHH
Q psy9256         100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDV----TQTKYH  175 (265)
Q Consensus       100 ~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv----~~~~~v  175 (265)
                      ..++-+|.++++..+++.++..+..+                                  .+.....+|.    ++++.+
T Consensus        26 ~~Vvi~~r~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~   71 (266)
T d1mxha_          26 FRVVVHYRHSEGAAQRLVAELNAARA----------------------------------GSAVLCKGDLSLSSSLLDCC   71 (266)
T ss_dssp             CEEEEEESSCHHHHHHHHHHHHHHST----------------------------------TCEEEEECCCSSSTTHHHHH
T ss_pred             CEEEEEECCchHHHHHHHHHHHhhcC----------------------------------CceEEEecccccchhHHHHH
Confidence            45567777777666666555544433                                  2344444444    445677


Q ss_pred             HHHHHHHHhhcccccEEEecccccccccccccchHHHHhhhhhh
Q psy9256         176 RRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFELN  219 (265)
Q Consensus       176 ~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~~~~~~~~~~~N  219 (265)
                      +++++.+.+++|++|+||||||+..+.++.+.+.+.++...+..
T Consensus        72 ~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~  115 (266)
T d1mxha_          72 EDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPI  115 (266)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CH
T ss_pred             HHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhccccc
Confidence            78888899999999999999999988877666666555554443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.74  E-value=0.00014  Score=57.01  Aligned_cols=46  Identities=22%  Similarity=0.281  Sum_probs=39.4

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      .-+|.+++|+||++|.|..........|++|+.+.+++++.+.+++
T Consensus        29 ~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~   74 (176)
T d1xa0a2          29 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV   74 (176)
T ss_dssp             CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred             CCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh
Confidence            3458999999999999999888777889999999999888766543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.71  E-value=0.00046  Score=57.22  Aligned_cols=91  Identities=21%  Similarity=0.269  Sum_probs=69.4

Q ss_pred             CCcEEEEcCCCC-chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASS-GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++-+. ....++++.+.+.|.++....-+-...+.+.+..++.                           .++
T Consensus        30 ~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~---------------------------~~~   82 (261)
T d1geea_          30 EKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSA---------------------------IKE   82 (261)
T ss_dssp             TTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH---------------------------HHH
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH---------------------------HHH
Confidence            466788888764 4667788888888888877766666655555543322                           357


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      +|++|+||||||+..+..+.+.+.++++..+..|.....
T Consensus        83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~  121 (261)
T d1geea_          83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAF  121 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccch
Confidence            899999999999999999999999999999888775443

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.70  E-value=5.7e-05  Score=59.22  Aligned_cols=77  Identities=17%  Similarity=0.283  Sum_probs=54.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|.+++|+||++|+|.+.+......|++|+.+.+++++.+.+++    .+   ...   ..|-.+++..+..    .+..
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~G---a~~---vi~~~~~~~~~~~----~~~~   94 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IG---FDA---AFNYKTVNSLEEA----LKKA   94 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT---CSE---EEETTSCSCHHHH----HHHH
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----hh---hhh---hcccccccHHHHH----HHHh
Confidence            69999999999999999999888999999999988766544433    33   122   1344444433322    2223


Q ss_pred             --CCccEEEeCCC
Q psy9256         125 --GCLDILINNAG  135 (265)
Q Consensus       125 --g~ldilinnAg  135 (265)
                        +.+|+++++.|
T Consensus        95 ~~~Gvd~v~D~vG  107 (182)
T d1v3va2          95 SPDGYDCYFDNVG  107 (182)
T ss_dssp             CTTCEEEEEESSC
T ss_pred             hcCCCceeEEecC
Confidence              46999999998

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.62  E-value=0.0001  Score=61.01  Aligned_cols=91  Identities=15%  Similarity=0.219  Sum_probs=69.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++=+..-..++++.+.+.|.++....-+-...+.+.+..+..                           .+++
T Consensus        25 ~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~---------------------------~~~~   77 (257)
T d2rhca1          25 EGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAV---------------------------VERY   77 (257)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------------------------HHHT
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH---------------------------HHHh
Confidence            4667888877666677788888888878776655655555555543322                           4678


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++++..++.|.....
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~  115 (257)
T d2rhca1          78 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVF  115 (257)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhh
Confidence            99999999999999999999999999999888876443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=0.00019  Score=55.71  Aligned_cols=77  Identities=16%  Similarity=0.236  Sum_probs=57.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|++++|+||++|+|...+......|++|+.+++++++.+.++    +.++  .    ...|-++++..++    +++.+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~----~lGa--~----~vi~~~~~d~~~~----v~~~t   93 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----KAGA--W----QVINYREEDLVER----LKEIT   93 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTC--S----EEEETTTSCHHHH----HHHHT
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH----hcCC--e----EEEECCCCCHHHH----HHHHh
Confidence            5899999999999999999888889999999999887766554    3442  1    2346666654443    34444


Q ss_pred             --CCccEEEeCCC
Q psy9256         125 --GCLDILINNAG  135 (265)
Q Consensus       125 --g~ldilinnAg  135 (265)
                        +..|+++++.|
T Consensus        94 ~g~g~d~v~d~~g  106 (179)
T d1qora2          94 GGKKVRVVYDSVG  106 (179)
T ss_dssp             TTCCEEEEEECSC
T ss_pred             CCCCeEEEEeCcc
Confidence              35899999887

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.61  E-value=0.0003  Score=55.37  Aligned_cols=87  Identities=21%  Similarity=0.214  Sum_probs=58.9

Q ss_pred             CCcEEEE-cCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWI-TGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlI-tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +|.+++| +||++|+|.+...-....|++|+.+.|+.+..++..+.+++.+++  .  ++.-|-.+.......+....+.
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad--~--vi~~~~~~~~~~~~~v~~~~~~  103 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT--Q--VITEDQNNSREFGPTIKEWIKQ  103 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS--E--EEEHHHHHCGGGHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc--E--EEeccccchhHHHHHHHHHHhh
Confidence            4655554 799999999988777778999999999988888888888887741  1  2222212222233333333333


Q ss_pred             -hCCccEEEeCCC
Q psy9256         124 -FGCLDILINNAG  135 (265)
Q Consensus       124 -~g~ldilinnAg  135 (265)
                       .+..|+++++.|
T Consensus       104 ~g~~vdvv~D~vg  116 (189)
T d1gu7a2         104 SGGEAKLALNCVG  116 (189)
T ss_dssp             HTCCEEEEEESSC
T ss_pred             ccCCceEEEECCC
Confidence             357999999987

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=6.6e-05  Score=62.74  Aligned_cols=89  Identities=20%  Similarity=0.155  Sum_probs=67.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|.++++++-+.--+.+.+..+...|.++...--+-...+.+.+..++                       +    .+++
T Consensus        27 ~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~-----------------------~----~~~~   79 (275)
T d1wmaa1          27 FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF-----------------------L----RKEY   79 (275)
T ss_dssp             SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHH-----------------------H----HHhc
Confidence            467888888888888899999988887766665566666665554332                       2    3568


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      |++|+||||||+..+....+.+.++++..++.|...
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g  115 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFG  115 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHH
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHH
Confidence            999999999999888877777778888777777643

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.55  E-value=0.00015  Score=55.80  Aligned_cols=83  Identities=28%  Similarity=0.379  Sum_probs=57.8

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|.+++|+| ++++|...+..+...|++|+.+++++++++.+++    .+.   .. .+..|.. .++.....+.+++.
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~ga---~~-~~~~~~~-~~~~~~~~~~~~~~   94 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGA---DV-TLVVDPA-KEEESSIIERIRSA   94 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTC---SE-EEECCTT-TSCHHHHHHHHHHH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cCC---cE-EEecccc-ccccchhhhhhhcc
Confidence            3678999997 5799999998888899999999998877765544    331   11 1222322 23345555666666


Q ss_pred             hC-CccEEEeCCCC
Q psy9256         124 FG-CLDILINNAGR  136 (265)
Q Consensus       124 ~g-~ldilinnAg~  136 (265)
                      .| ..|++|.++|.
T Consensus        95 ~g~g~D~vid~~g~  108 (170)
T d1e3ja2          95 IGDLPNVTIDCSGN  108 (170)
T ss_dssp             SSSCCSEEEECSCC
T ss_pred             cccCCceeeecCCC
Confidence            64 69999999983

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.53  E-value=0.00085  Score=55.15  Aligned_cols=91  Identities=23%  Similarity=0.264  Sum_probs=66.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHH-cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++-+..-....++.+.+ .|.++....-+-...+.+.+..++.                           .++
T Consensus        28 ~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~~   80 (251)
T d1vl8a_          28 AGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV---------------------------KEK   80 (251)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH---------------------------HHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHH---------------------------HHH
Confidence            477788888766666677777754 4777666555555555544443322                           457


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      +|++|+||||||+.....+.+.+.++++..+..|.....
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~  119 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY  119 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhh
Confidence            899999999999998999999999999999888876544

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.51  E-value=0.00062  Score=56.17  Aligned_cols=91  Identities=25%  Similarity=0.317  Sum_probs=66.1

Q ss_pred             CCcEEEEcCCCC-chhHHHHHHHHH-cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASS-GIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~-GIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|-.+++++-+. .-...+...+.+ .|.++....-+-...+.+.+..++.                           .+
T Consensus        27 ~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~   79 (260)
T d1x1ta1          27 QGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNA---------------------------VR   79 (260)
T ss_dssp             TTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHH---------------------------HH
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH---------------------------HH
Confidence            466788888764 445556666644 4777777665655555555443322                           46


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      .+|++|+||||||+.....+.+.+.++++..++.|.....
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~  119 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVF  119 (260)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             HhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccc
Confidence            7899999999999999999999999999999988876544

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.49  E-value=0.00021  Score=58.63  Aligned_cols=90  Identities=20%  Similarity=0.265  Sum_probs=68.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +.++++++-+..-..+++..+...|.++....-+-...+++.+..++.                           .+++|
T Consensus        32 ~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~---------------------------~~~~g   84 (240)
T d2bd0a1          32 EPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI---------------------------VERYG   84 (240)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH---------------------------HHHTS
T ss_pred             CcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH---------------------------HHHcC
Confidence            445667676666667788888888888777666666655555543322                           46789


Q ss_pred             CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         126 CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       126 ~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      ++|+||||||+.....+.+.+.++++..++.|.....
T Consensus        85 ~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~  121 (240)
T d2bd0a1          85 HIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF  121 (240)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CcceeecccccccCCccccCCHHHHhhcCCEeehHHH
Confidence            9999999999999999999999999999988876544

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=0.00071  Score=55.78  Aligned_cols=90  Identities=17%  Similarity=0.248  Sum_probs=66.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-..++++++.+.|.++...--+....+.+.+..++.                           .+++
T Consensus        34 ~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~---------------------------~~~~   86 (255)
T d1fmca_          34 AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFA---------------------------ISKL   86 (255)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------------------------HHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH---------------------------HHHc
Confidence            5778888887777778888888888877766655555555554443322                           4668


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+..+..+ +.+.++++..+..|.....
T Consensus        87 g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~  123 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFF  123 (255)
T ss_dssp             SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhh
Confidence            999999999998766544 7788999999888876544

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=0.00033  Score=47.15  Aligned_cols=44  Identities=30%  Similarity=0.409  Sum_probs=38.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      ++++++|+||++|.|..........|++|+.+.+++++.+.+++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~   74 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS   74 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHH
Confidence            57899999999999999888777889999999999888766543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.46  E-value=0.0011  Score=54.61  Aligned_cols=89  Identities=19%  Similarity=0.066  Sum_probs=67.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHH-cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++-+..-....++++.+ .|.++....-+-...+.+.+..++.                           .++
T Consensus        32 ~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~~   84 (260)
T d1h5qa_          32 AGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI---------------------------DAD   84 (260)
T ss_dssp             TTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH---------------------------HHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH---------------------------HHH
Confidence            577888998888777777777755 4777766655555555555543322                           467


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      +|++|+||||||+.....+.+.+.++++..++.|...
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g  121 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFG  121 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHH
T ss_pred             hCCCcEecccccccccCCHHHhccccccccccccccc
Confidence            8999999999999999999999999999998888743

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=0.00013  Score=56.63  Aligned_cols=77  Identities=25%  Similarity=0.381  Sum_probs=55.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|++++|+||++++|...+......|++|+.+.+++++.+.+    ++.+.  .+    ..|.++++.    .+.+++.+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~~Ga--~~----vi~~~~~~~----~~~i~~~t   93 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGA--HE----VFNHREVNY----IDKIKKYV   93 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTC--SE----EEETTSTTH----HHHHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----cccCc--cc----ccccccccH----HHHhhhhh
Confidence            689999999999999999888888899999998876554433    34442  12    236666543    33445555


Q ss_pred             --CCccEEEeCCC
Q psy9256         125 --GCLDILINNAG  135 (265)
Q Consensus       125 --g~ldilinnAg  135 (265)
                        ...|+++++.|
T Consensus        94 ~~~g~d~v~d~~g  106 (174)
T d1yb5a2          94 GEKGIDIIIEMLA  106 (174)
T ss_dssp             CTTCEEEEEESCH
T ss_pred             ccCCceEEeeccc
Confidence              35899999987

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00016  Score=56.09  Aligned_cols=81  Identities=21%  Similarity=0.301  Sum_probs=58.0

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      ..+++||.++|-|+ +|-+++++..|.+.|++|.+..|+.++.+++.+......    .......|  +.          
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~----~~~~~~~~--~~----------   75 (170)
T d1nyta1          13 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG----SIQALSMD--EL----------   75 (170)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS----SEEECCSG--GG----------
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc----cccccccc--cc----------
Confidence            35678999999998 899999999999999999999999888777666544332    22222211  11          


Q ss_pred             HHHhCCccEEEeCCCCCccc
Q psy9256         121 IQQFGCLDILINNAGRSQRA  140 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~  140 (265)
                        ...+.|++||+....-.+
T Consensus        76 --~~~~~dliIN~Tp~G~~~   93 (170)
T d1nyta1          76 --EGHEFDLIINATSSGISG   93 (170)
T ss_dssp             --TTCCCSEEEECCSCGGGT
T ss_pred             --cccccceeecccccCccc
Confidence              124679999998765433

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.43  E-value=0.00029  Score=57.82  Aligned_cols=91  Identities=19%  Similarity=0.236  Sum_probs=68.2

Q ss_pred             CCcEEEEcCCCC-chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASS-GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.++++...+ .....+++.+...|.++....-+....+.+.+..++.                           .++
T Consensus        24 ~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~~   76 (244)
T d1edoa_          24 AGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTA---------------------------IDA   76 (244)
T ss_dssp             TTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHH---------------------------HHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHH---------------------------HHH
Confidence            466677775544 5567777888778888777665665655555543322                           467


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      +|++|+||||||+.....+.+.+.++++..++.|.....
T Consensus        77 ~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~  115 (244)
T d1edoa_          77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVF  115 (244)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             cCCCCccccccccccccchhccchHHHHHHHhhhhhhHH
Confidence            899999999999999999999999999999988876544

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.38  E-value=0.00095  Score=54.83  Aligned_cols=90  Identities=23%  Similarity=0.267  Sum_probs=63.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+.-....+++.+.. +.++....-+-...+.+.+..++                       .    .+++
T Consensus        29 ~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~   80 (251)
T d1zk4a1          29 EGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDA-----------------------T----EKAF   80 (251)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHH-----------------------H----HHHh
Confidence            467788888766666667766644 33555554455555544443322                       2    4678


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++++..++.|.....
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~  118 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVF  118 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccc
Confidence            99999999999999999999999999999887775444

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=9.5e-05  Score=60.23  Aligned_cols=134  Identities=19%  Similarity=0.187  Sum_probs=81.2

Q ss_pred             ccccCCcEEEEcCC----------------CCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEe
Q psy9256          41 LNYFNNKVVWITGA----------------SSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLT  104 (265)
Q Consensus        41 ~~~l~gk~vlItGa----------------s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (265)
                      +.+|+|+.+|||+|                ||.+|.+||+.+...|++|.++.-.....            .+..+..+ 
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~------------~p~~~~~~-   67 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP------------TPPFVKRV-   67 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC------------CCTTEEEE-
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC------------cccccccc-
Confidence            46899999999988                66799999999999999999986433210            11223222 


Q ss_pred             ecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccc--------------------hhhhHHHHHhhhc-ccCCcee
Q psy9256         105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWE--------------------DIELEVDRELFTY-AYRPSIY  163 (265)
Q Consensus       105 ~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~--------------------~~~~~~~~~~~~~-~~~~~v~  163 (265)
                       .+.+   .....+.+.+....-|++|.+|.++......                    ..++.....+... ..+.-+.
T Consensus        68 -~~~t---~~~m~~~~~~~~~~~D~~i~aAAvsDf~~~~~~~~k~Kk~~~~~~~l~L~L~~tpdIL~~l~~~k~~~~~~V  143 (223)
T d1u7za_          68 -DVMT---ALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVV  143 (223)
T ss_dssp             -ECCS---HHHHHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEE
T ss_pred             -eehh---hHHHHHHHHhhhccceeEeeeechhhhhhhhhhhhhcccccccccccceeeecCHHHHHHHHhhccCCceEE
Confidence             2333   4445555666777889999999997542110                    0123333333222 2234567


Q ss_pred             eeeccccChhHHHHHHHHHHhhcccccEEEec
Q psy9256         164 TLTLDVTQTKYHRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       164 ~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnn  195 (265)
                      .+..+..+.  .+.+.+++.+  ..+|.+|.|
T Consensus       144 GFaaEt~~l--~~~A~~Kl~~--K~~D~IvAN  171 (223)
T d1u7za_         144 GFAAETNNV--EEYARQKRIR--KNLDLICAN  171 (223)
T ss_dssp             EEEEESSSH--HHHHHHHHHH--HTCSEEEEE
T ss_pred             EEeecccch--hhHHHHHHHh--cCCCEEEee
Confidence            777765433  2233333332  368888877

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.35  E-value=0.00019  Score=55.83  Aligned_cols=77  Identities=21%  Similarity=0.304  Sum_probs=54.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|++++|+||++|+|...+......|++|+.+.+++++.+.+    ++.+.   .   ...|-.+++-.    +.+++.+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~~Ga---~---~vi~~~~~~~~----~~v~~~t   90 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGV---E---YVGDSRSVDFA----DEILELT   90 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCC---S---EEEETTCSTHH----HHHHHHT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc----ccccc---c---ccccCCccCHH----HHHHHHh
Confidence            489999999999999999888888899999998876554433    33332   2   12354554433    3445555


Q ss_pred             --CCccEEEeCCC
Q psy9256         125 --GCLDILINNAG  135 (265)
Q Consensus       125 --g~ldilinnAg  135 (265)
                        ...|+++++.|
T Consensus        91 ~~~g~d~v~d~~g  103 (183)
T d1pqwa_          91 DGYGVDVVLNSLA  103 (183)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             CCCCEEEEEeccc
Confidence              35999999998

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.30  E-value=0.00094  Score=49.18  Aligned_cols=60  Identities=22%  Similarity=0.231  Sum_probs=49.3

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      .++|.|+ +-+|..+++.|.+.|.+|++++++++..+++.+.        ....++..|.++++.++.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~--------~~~~vi~Gd~~~~~~l~~~   61 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE--------IDALVINGDCTKIKTLEDA   61 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------CSSEEEESCTTSHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh--------hhhhhccCcccchhhhhhc
Confidence            4788898 9999999999999999999999998777665442        1355788999999877766

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.30  E-value=0.001  Score=54.75  Aligned_cols=88  Identities=20%  Similarity=0.241  Sum_probs=58.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.|++++-+..-...+++++   |.+...+.-+....+...+..+                       ..    .+.+
T Consensus        29 ~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~-----------------------~~----~~~~   78 (253)
T d1hxha_          29 EGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMA-----------------------AV----QRRL   78 (253)
T ss_dssp             TTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHH-----------------------HH----HHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHH-----------------------HH----HHHh
Confidence            4667788776554444455544   4444444334444444333322                       22    3568


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+..+..+.+.+.++++..+..|.....
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~  116 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVF  116 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHH
Confidence            99999999999999999999999999999888876544

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.29  E-value=0.00053  Score=53.20  Aligned_cols=79  Identities=23%  Similarity=0.312  Sum_probs=57.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+++||.++|-|+ +|.+++++..|.+.+.+|++..|+.++++++.+......    .......|-.             
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~----~~~~~~~~~~-------------   75 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG----NIQAVSMDSI-------------   75 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS----CEEEEEGGGC-------------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc----ccchhhhccc-------------
Confidence            4678999999877 888999999999988899999999888887777654332    3433443321             


Q ss_pred             HHhCCccEEEeCCCCCcc
Q psy9256         122 QQFGCLDILINNAGRSQR  139 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~  139 (265)
                       .....|++||+....-.
T Consensus        76 -~~~~~diiIN~tp~g~~   92 (171)
T d1p77a1          76 -PLQTYDLVINATSAGLS   92 (171)
T ss_dssp             -CCSCCSEEEECCCC---
T ss_pred             -cccccceeeeccccccc
Confidence             13568999999887543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.29  E-value=0.0006  Score=57.76  Aligned_cols=47  Identities=23%  Similarity=0.331  Sum_probs=40.8

Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCc
Q psy9256         115 RCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       115 ~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (265)
                      ++++.+.+.+|++|+||||||+.....+.+.+.++++..++.|....
T Consensus        79 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~  125 (302)
T d1gz6a_          79 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGS  125 (302)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhh
Confidence            44667788999999999999999999999999999999988887653

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.28  E-value=0.00021  Score=55.35  Aligned_cols=75  Identities=17%  Similarity=0.287  Sum_probs=52.7

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -+|++++|+||++++|...+......|++|+.+++++++.+.+++    .+.  ..+    .|..+.  .    +.. ..
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~----lGa--~~~----i~~~~~--~----~~~-~~   88 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGA--EEA----ATYAEV--P----ERA-KA   88 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTC--SEE----EEGGGH--H----HHH-HH
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc----ccc--cee----eehhhh--h----hhh-hc
Confidence            368999999999999999988888889999999988877765543    332  111    233221  1    112 23


Q ss_pred             hCCccEEEeCCC
Q psy9256         124 FGCLDILINNAG  135 (265)
Q Consensus       124 ~g~ldilinnAg  135 (265)
                      .+..|++++..|
T Consensus        89 ~~g~D~v~d~~G  100 (171)
T d1iz0a2          89 WGGLDLVLEVRG  100 (171)
T ss_dssp             TTSEEEEEECSC
T ss_pred             cccccccccccc
Confidence            457999999877

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.28  E-value=0.00079  Score=52.34  Aligned_cols=81  Identities=26%  Similarity=0.340  Sum_probs=55.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .+|.+++|+|+ +++|...+......|+ +|+.+++++++++.++    +.++   .   ...|.++.+ .....+.+.+
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~----~lGa---~---~vi~~~~~~-~~~~~~~i~~   94 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----EIGA---D---LTLNRRETS-VEERRKAIMD   94 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----HTTC---S---EEEETTTSC-HHHHHHHHHH
T ss_pred             CCCCEEEEECC-Cccchhheecccccccccccccccccccccccc----cccc---e---EEEeccccc-hHHHHHHHHH
Confidence            36899999997 7999999888888898 7999999887775443    3332   1   123444332 2233344555


Q ss_pred             HhC--CccEEEeCCCC
Q psy9256         123 QFG--CLDILINNAGR  136 (265)
Q Consensus       123 ~~g--~ldilinnAg~  136 (265)
                      ..+  ..|++|.++|.
T Consensus        95 ~~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          95 ITHGRGADFILEATGD  110 (182)
T ss_dssp             HTTTSCEEEEEECSSC
T ss_pred             hhCCCCceEEeecCCc
Confidence            552  58999999984

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.25  E-value=0.00075  Score=55.32  Aligned_cols=89  Identities=19%  Similarity=0.265  Sum_probs=62.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-...  ......+...|.++....-+-...+.+.+..++.                           .+.+
T Consensus        28 ~Ga~V~~~~~~~~--~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~---------------------------~~~~   78 (247)
T d2ew8a1          28 EGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQV---------------------------ISTF   78 (247)
T ss_dssp             TTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------------------------HHHH
T ss_pred             CCCEEEEEECCch--HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHH---------------------------HHHc
Confidence            4667777765543  3344445566777666655555555555543322                           4678


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++++..++.|.....
T Consensus        79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~  116 (247)
T d2ew8a1          79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGF  116 (247)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhh
Confidence            99999999999999999999999999999988876544

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.24  E-value=0.00049  Score=56.62  Aligned_cols=91  Identities=13%  Similarity=0.147  Sum_probs=69.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++=+..-...++..+.+.|.++....-+-...+.+.+..++.                           .+++
T Consensus        33 ~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~---------------------------~~~~   85 (251)
T d2c07a1          33 SVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKI---------------------------LTEH   85 (251)
T ss_dssp             TSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH---------------------------HHHC
T ss_pred             cCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH---------------------------HHhc
Confidence            5677888887666667788888777877766655555555555443322                           4678


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++++..+..|.....
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~  123 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLF  123 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHH
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhh
Confidence            99999999999999999999999999999988876544

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.20  E-value=0.00055  Score=50.39  Aligned_cols=60  Identities=10%  Similarity=0.150  Sum_probs=45.8

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      |..+|.|+ +-+|..+|+.|.+.|..|++++.+++..+++.+         .....+..|.++++.+..+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~---------~~~~~~~gd~~~~~~l~~a   60 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---------YATHAVIANATEENELLSL   60 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT---------TCSEEEECCTTCTTHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH---------hCCcceeeecccchhhhcc
Confidence            34566677 789999999999999999999998876655432         1223566899999877665

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.15  E-value=0.0032  Score=51.59  Aligned_cols=88  Identities=20%  Similarity=0.258  Sum_probs=59.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-...+++++   |.++....-+-...+.+.+..++                       .    .+++
T Consensus        28 ~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~-----------------------~----~~~~   77 (256)
T d1k2wa_          28 EGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAE-----------------------L----LDRW   77 (256)
T ss_dssp             TTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHH-----------------------H----HHHh
Confidence            4667777775543334444443   55555554455555555444332                       2    3668


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+...+.+.+.+.++++..+..|.....
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~  115 (256)
T d1k2wa_          78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTL  115 (256)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCccEEEeecccccccccccCCHHHHHhhhceeeeccc
Confidence            99999999999999899999999999999888875443

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.14  E-value=0.00076  Score=55.69  Aligned_cols=91  Identities=16%  Similarity=0.156  Sum_probs=66.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-...++..+...|.++...--+....+.+.+..+..                           .+.+
T Consensus        28 ~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~~~   80 (260)
T d1zema1          28 EGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSV---------------------------VRDF   80 (260)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHH---------------------------HHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH---------------------------HHHh
Confidence            5777888887666666777788777877766655555555555543322                           3668


Q ss_pred             CCccEEEeCCCCCcc-cccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQR-AAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+... ..+.+.+.++++..+..|.....
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~  119 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAF  119 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccc
Confidence            999999999998754 67889999999999888876543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.13  E-value=0.00038  Score=53.26  Aligned_cols=76  Identities=17%  Similarity=0.187  Sum_probs=52.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      ++|.++|.|+ |.+|..+|+.|+++|++|++++|+.++++++.+..       ........+..+.......       .
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~-------~~~~~~~~~~~~~~~~~~~-------i   65 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV-------QHSTPISLDVNDDAALDAE-------V   65 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC-------TTEEEEECCTTCHHHHHHH-------H
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc-------cccccccccccchhhhHhh-------h
Confidence            3688999887 99999999999999999999999988777655421       3344445555554444333       3


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                      ...|..|....
T Consensus        66 ~~~~~~i~~~~   76 (182)
T d1e5qa1          66 AKHDLVISLIP   76 (182)
T ss_dssp             TTSSEEEECSC
T ss_pred             hccceeEeecc
Confidence            45566665443

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.0011  Score=54.34  Aligned_cols=91  Identities=18%  Similarity=0.073  Sum_probs=70.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++=+..=...++.++...|.++....-+-...+.+.+..+..                           .+.+
T Consensus        30 ~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i---------------------------~~~~   82 (244)
T d1yb1a_          30 LKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKV---------------------------KAEI   82 (244)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------------------------HHHT
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH---------------------------HHHc
Confidence            5778888887777677888888888888766666666665555543322                           4678


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|++|||||+.....+.+.+.+.++..+..|..+..
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~  120 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF  120 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHH
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccH
Confidence            99999999999999999999999999999888876544

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.09  E-value=0.00092  Score=55.16  Aligned_cols=91  Identities=18%  Similarity=0.180  Sum_probs=64.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKC--GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|-.+++++-+..-..+.+..+...  +.++....-+-...+.+.+...+.                           .+
T Consensus        27 ~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~---------------------------~~   79 (258)
T d1iy8a_          27 EGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT---------------------------TE   79 (258)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH---------------------------HH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHH---------------------------HH
Confidence            5777888887776666677777654  446665544555555554443322                           46


Q ss_pred             HhCCccEEEeCCCCCcc-cccchhhhHHHHHhhhcccCCce
Q psy9256         123 QFGCLDILINNAGRSQR-AAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      ++|++|+||||||+..+ ..+.+.+.++++..++.|-....
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~  120 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF  120 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHH
T ss_pred             HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchh
Confidence            78999999999998754 56778899999999888876544

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.00054  Score=56.53  Aligned_cols=30  Identities=20%  Similarity=0.398  Sum_probs=26.2

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCC-eEEEEec
Q psy9256          49 VWITGASSGIGEALALQLSKCGA-KLVLSAR   78 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~-~V~~~~r   78 (265)
                      +|||||+|=||..++++|.++|. .|+.+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~   32 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC
Confidence            79999999999999999999997 4777653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.001  Score=54.76  Aligned_cols=89  Identities=21%  Similarity=0.139  Sum_probs=65.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      .|-.+++++=+..=..+++.++.+.|.  ++...--+-...+.+.+..+..                           .+
T Consensus        33 ~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~---------------------------~~   85 (257)
T d1xg5a_          33 QGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI---------------------------RS   85 (257)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH---------------------------HH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH---------------------------HH
Confidence            577788887666667788888888763  5555444444444444433322                           45


Q ss_pred             HhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      .+|++|+||||||......+.+.+.++++..++.|...
T Consensus        86 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~  123 (257)
T d1xg5a_          86 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLA  123 (257)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHH
T ss_pred             hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhH
Confidence            78999999999999999999999999999888777643

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.07  E-value=0.0013  Score=54.56  Aligned_cols=23  Identities=17%  Similarity=0.229  Sum_probs=20.6

Q ss_pred             CceeeeeccccChhHHHHHHHHH
Q psy9256         160 PSIYTLTLDVTQTKYHRRCFDAV  182 (265)
Q Consensus       160 ~~v~~~~~dv~~~~~v~~~~~~i  182 (265)
                      .++..+.||++|+++++++++++
T Consensus        56 ~~~~~~~~Dv~~~~~v~~~~~~~   78 (274)
T d1xhla_          56 EKINAVVADVTEASGQDDIINTT   78 (274)
T ss_dssp             GGEEEEECCTTSHHHHHHHHHHH
T ss_pred             cceEEEEeeCCCHHHHHHHHHHH
Confidence            47889999999999999999875

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.03  E-value=0.0014  Score=54.08  Aligned_cols=90  Identities=19%  Similarity=0.145  Sum_probs=65.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-...++.++...|.++....-+....+.+.+...+.                           .+++
T Consensus        31 ~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~~~   83 (259)
T d2ae2a_          31 LGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTV---------------------------ANHF   83 (259)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH---------------------------HHHT
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHH---------------------------HHHh
Confidence            4667788776666667788888888877766555555555544433221                           2455


Q ss_pred             C-CccEEEeCCCCCcccccchhhhHHHHHhhhcccCCc
Q psy9256         125 G-CLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       125 g-~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (265)
                      + ++|++|||||+.....+.+.+.++++..++.|-...
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~  121 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAA  121 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHH
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhccccee
Confidence            5 899999999999999999999999999988887643

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.00  E-value=0.00022  Score=61.06  Aligned_cols=56  Identities=7%  Similarity=0.119  Sum_probs=47.4

Q ss_pred             EeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCcc--cccchhhhHHHHHhhhccc
Q psy9256         103 LTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQR--AAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       103 ~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~--~~~~~~~~~~~~~~~~~~~  158 (265)
                      ..+|+++.++++++++.+.+.+|++|+||||||....  +.+.+.+.+.++..+..|.
T Consensus        90 ~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~  147 (329)
T d1uh5a_          90 KRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSS  147 (329)
T ss_dssp             HHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred             hhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccch
Confidence            3579999999999999999999999999999998764  3567778888887776654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0015  Score=54.98  Aligned_cols=89  Identities=20%  Similarity=0.168  Sum_probs=66.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHH-----cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSK-----CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      .|-.|++++-+..-..+.++++..     .|.+++...-+....+.+.+..++.                          
T Consensus        35 ~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~--------------------------   88 (297)
T d1yxma1          35 LGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST--------------------------   88 (297)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH--------------------------
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH--------------------------
Confidence            466788887766666777887764     3567776666665655555543322                          


Q ss_pred             HHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         120 VIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                       .+.+|++|+||||||+.....+.+.+.++++..++.|...
T Consensus        89 -~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g  128 (297)
T d1yxma1          89 -LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG  128 (297)
T ss_dssp             -HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             -HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccc
Confidence             4678999999999999999999999999999998888765

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.93  E-value=0.0011  Score=54.61  Aligned_cols=91  Identities=20%  Similarity=0.080  Sum_probs=61.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..--..+++.+...+.++.....+....+...+..++.                           .+++
T Consensus        31 ~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~---------------------------~~~~   83 (259)
T d1xq1a_          31 FGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV---------------------------SSMF   83 (259)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH---------------------------HHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH---------------------------HHHh
Confidence            4667888877666667778888887777766655555555544433321                           3556


Q ss_pred             -CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 -GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 -g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                       |++|+||||||+.....+.+.+.++++..++.|.....
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~  122 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAY  122 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhhe
Confidence             78999999999999999999999999998888775433

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.93  E-value=0.0007  Score=51.92  Aligned_cols=75  Identities=16%  Similarity=0.339  Sum_probs=54.5

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..++.++.++|.|+ |++|..+++.|...|+ ++.++.|+.++.+++.+.+   +   .+  .     .+.+       .
T Consensus        19 ~~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~---~---~~--~-----~~~~-------~   77 (159)
T d1gpja2          19 LGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---G---GE--A-----VRFD-------E   77 (159)
T ss_dssp             HSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---T---CE--E-----CCGG-------G
T ss_pred             hCCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh---h---cc--c-----ccch-------h
Confidence            35789999999998 9999999999999998 5888898877666555543   2   11  1     1222       2


Q ss_pred             HHHHhCCccEEEeCCCC
Q psy9256         120 VIQQFGCLDILINNAGR  136 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~  136 (265)
                      ..+.....|++|++.+.
T Consensus        78 ~~~~l~~~Divi~atss   94 (159)
T d1gpja2          78 LVDHLARSDVVVSATAA   94 (159)
T ss_dssp             HHHHHHTCSEEEECCSS
T ss_pred             HHHHhccCCEEEEecCC
Confidence            23345678999999884

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.85  E-value=0.00098  Score=54.45  Aligned_cols=42  Identities=19%  Similarity=0.192  Sum_probs=36.0

Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      .+++|++|+||||||+.....+.+.+.++++..++.|.....
T Consensus        72 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~  113 (242)
T d1ulsa_          72 LAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSF  113 (242)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHH
T ss_pred             HHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhh
Confidence            356899999999999999999999999999999887765443

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.82  E-value=0.0021  Score=49.93  Aligned_cols=44  Identities=30%  Similarity=0.409  Sum_probs=37.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      .+++++|+||++|+|..........|++|+.+.+++++.+.+++
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~   74 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS   74 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh
Confidence            45689999999999999888777889999999999888765543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.79  E-value=0.013  Score=48.10  Aligned_cols=48  Identities=21%  Similarity=0.169  Sum_probs=28.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC---eEEEEecC---CCcHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA---KLVLSARS---SSNLERVKNLCVQ   92 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~---~V~~~~r~---~~~~~~~~~~~~~   92 (265)
                      .|-.+++++=+..-..++++.+.+.|.   ++....-+   ++..+++.+.+.+
T Consensus        28 ~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_          28 EGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            566788888766666777888877653   35444333   3344444544433

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.0031  Score=48.23  Aligned_cols=81  Identities=25%  Similarity=0.309  Sum_probs=56.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      -+|.+++|.|+ +++|...+..+...|+ +|+++++++++++.+++    .++   . .++.   .+.++.....+....
T Consensus        25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~----~Ga---~-~~~~---~~~~~~~~~~~~~~~   92 (171)
T d1pl8a2          25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGA---D-LVLQ---ISKESPQEIARKVEG   92 (171)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC---S-EEEE---CSSCCHHHHHHHHHH
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH----hCC---c-cccc---ccccccccccccccc
Confidence            35788999987 8999999988888899 69999998877665433    332   1 1222   222334444555566


Q ss_pred             HhC-CccEEEeCCCC
Q psy9256         123 QFG-CLDILINNAGR  136 (265)
Q Consensus       123 ~~g-~ldilinnAg~  136 (265)
                      ..| ..|++|.++|.
T Consensus        93 ~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          93 QLGCKPEVTIECTGA  107 (171)
T ss_dssp             HHTSCCSEEEECSCC
T ss_pred             cCCCCceEEEeccCC
Confidence            665 69999999983

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.76  E-value=0.00044  Score=53.12  Aligned_cols=79  Identities=15%  Similarity=0.184  Sum_probs=54.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      -+|.+++|.|+++++|...+..+...|+ +|+.+++++++.+.+++    .+.   .   ...|.++.+..+..    ++
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~----~Ga---~---~~i~~~~~~~~~~~----~~   91 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGA---D---YVINASMQDPLAEI----RR   91 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTC---S---EEEETTTSCHHHHH----HH
T ss_pred             CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH----cCC---c---eeeccCCcCHHHHH----HH
Confidence            3688999999999999999988888884 78888888766655443    332   1   12344444433333    44


Q ss_pred             Hh--CCccEEEeCCCC
Q psy9256         123 QF--GCLDILINNAGR  136 (265)
Q Consensus       123 ~~--g~ldilinnAg~  136 (265)
                      ..  +..|++|.++|.
T Consensus        92 ~~~~~~~d~vid~~g~  107 (170)
T d1jvba2          92 ITESKGVDAVIDLNNS  107 (170)
T ss_dssp             HTTTSCEEEEEESCCC
T ss_pred             Hhhcccchhhhccccc
Confidence            44  459999999984

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.75  E-value=0.00044  Score=57.76  Aligned_cols=55  Identities=13%  Similarity=0.117  Sum_probs=44.9

Q ss_pred             ecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCc--ccccchhhhHHHHHhhhcccC
Q psy9256         105 LDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQ--RAAWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       105 ~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~--~~~~~~~~~~~~~~~~~~~~~  159 (265)
                      .|.++.++++++++.+++.+|++|+||||||+..  ...+.+.+.++++..+..|..
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~  154 (297)
T d1d7oa_          98 YAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSY  154 (297)
T ss_dssp             HHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTH
T ss_pred             hhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhh
Confidence            3567888899999999999999999999999854  345777888888888775543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.73  E-value=0.0021  Score=52.42  Aligned_cols=88  Identities=17%  Similarity=0.131  Sum_probs=59.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-..++++.+..+   +....-+....+.+.+..+                       .+    .+++
T Consensus        27 ~G~~Vv~~~r~~~~l~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~-----------------------~~----~~~~   76 (243)
T d1q7ba_          27 RGAKVIGTATSENGAQAISDYLGAN---GKGLMLNVTDPASIESVLE-----------------------KI----RAEF   76 (243)
T ss_dssp             TTCEEEEEESSHHHHHHHHHHHGGG---EEEEECCTTCHHHHHHHHH-----------------------HH----HHHT
T ss_pred             cCCEEEEEeCCHHHHHHHHHHhCCC---CcEEEEEecCHHHhhhhhh-----------------------hh----hccc
Confidence            4667888876655555666665433   2222223334444433322                       22    4678


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++++..+..|.....
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~  114 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVF  114 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhh
Confidence            99999999999999999999999999999888876543

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.72  E-value=0.00083  Score=51.88  Aligned_cols=44  Identities=27%  Similarity=0.394  Sum_probs=38.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      .+.+++|+||++|+|...+......|++|+.+.+++++.+.+++
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~   66 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ   66 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh
Confidence            46789999999999999887777789999999999988876654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.71  E-value=0.02  Score=43.98  Aligned_cols=80  Identities=11%  Similarity=0.187  Sum_probs=53.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH-HHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY-HRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~  120 (265)
                      --+|.+++|.|+ +|+|...+..+...|+ +|+.+++++++++-+++    +++   ..   ..|.++.++ .+..   .
T Consensus        27 ~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~----~GA---~~---~in~~~~~~~~~~~---~   92 (176)
T d1d1ta2          27 VKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA----VGA---TE---CISPKDSTKPISEV---L   92 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----HTC---SE---EECGGGCSSCHHHH---H
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh----cCC---cE---EECccccchHHHHH---H
Confidence            446899999987 8999999999999985 79999999998876554    332   11   123333222 2212   1


Q ss_pred             HHHh-CCccEEEeCCCC
Q psy9256         121 IQQF-GCLDILINNAGR  136 (265)
Q Consensus       121 ~~~~-g~ldilinnAg~  136 (265)
                      +... +..|+.|...|.
T Consensus        93 ~~~~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          93 SEMTGNNVGYTFEVIGH  109 (176)
T ss_dssp             HHHHTSCCCEEEECSCC
T ss_pred             HHhccccceEEEEeCCc
Confidence            1122 479999998883

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.71  E-value=0.003  Score=51.82  Aligned_cols=89  Identities=25%  Similarity=0.311  Sum_probs=65.6

Q ss_pred             CCcEEEEc-CCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWIT-GASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlIt-Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.++|+ +-...--..+++.+.+.|.+++..-.+....+.+.+....                       .    .++
T Consensus        29 ~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~-----------------------~----~~~   81 (259)
T d1ja9a_          29 RGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDK-----------------------A----VSH   81 (259)
T ss_dssp             TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH-----------------------H----HHH
T ss_pred             cCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHH-----------------------H----HHH
Confidence            35556665 4455666778888888888887776666665555554332                       1    467


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      +|++|++|||||+.....+.+.+.+.++..+..|-..
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~  118 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRG  118 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccce
Confidence            8999999999999988899999999999888777653

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=96.70  E-value=0.00052  Score=56.44  Aligned_cols=40  Identities=20%  Similarity=0.261  Sum_probs=35.4

Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      .+.+|++|+||||||+..+..+.+.+.++++..++.|-..
T Consensus        71 ~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g  110 (248)
T d2d1ya1          71 AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTA  110 (248)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHH
T ss_pred             HHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhh
Confidence            3568999999999999999999999999999998887654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.69  E-value=0.006  Score=46.71  Aligned_cols=79  Identities=15%  Similarity=0.272  Sum_probs=51.9

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh-HHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT-KYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~  121 (265)
                      -+|.+++|.|+ +|+|...+..+...|+ +|+.+++++++.+.+++    .+   ...   ..|..+. +.+...   .+
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~----~G---a~~---~i~~~~~~~~~~~~---~~   92 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VG---ATE---CVNPQDYKKPIQEV---LT   92 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TT---CSE---EECGGGCSSCHHHH---HH
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH----hC---Cee---EEecCCchhHHHHH---HH
Confidence            36899999999 6899999999998885 78888998888765544    22   111   1222222 222222   12


Q ss_pred             HHh-CCccEEEeCCCC
Q psy9256         122 QQF-GCLDILINNAGR  136 (265)
Q Consensus       122 ~~~-g~ldilinnAg~  136 (265)
                      ... +..|++|.+.|.
T Consensus        93 ~~~~~G~D~vid~~G~  108 (176)
T d2jhfa2          93 EMSNGGVDFSFEVIGR  108 (176)
T ss_dssp             HHTTSCBSEEEECSCC
T ss_pred             HHhcCCCCEEEecCCc
Confidence            222 579999999984

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.63  E-value=0.002  Score=52.61  Aligned_cols=88  Identities=19%  Similarity=0.200  Sum_probs=59.5

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++=+..-..+++.++..   ++....-+-...+.+.+..++                       .    .+.+
T Consensus        29 ~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~   78 (244)
T d1nffa_          29 EGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDT-----------------------A----VTAF   78 (244)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHhhC---cceEEEeecCCHHHHHHHHHH-----------------------H----HHHh
Confidence            466778877666555555555532   333333344444444443322                       2    4567


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++++..+..|.....
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~  116 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVF  116 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHH
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhh
Confidence            99999999999999999999999999999988876544

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.52  E-value=0.0088  Score=44.81  Aligned_cols=38  Identities=16%  Similarity=0.355  Sum_probs=29.9

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLER   85 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~   85 (265)
                      +.+.|.|+ +.+|..+|..++..|  ..+++.+++++..+.
T Consensus         6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g   45 (146)
T d1ez4a1           6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKG   45 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHH
Confidence            34666686 889999999999987  579999988755443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.51  E-value=0.016  Score=43.36  Aligned_cols=47  Identities=19%  Similarity=0.133  Sum_probs=34.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLC   90 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~   90 (265)
                      +..++.+.|.|+ +.+|..+|..++..|.  .+++.+++++..+.....+
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl   51 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDF   51 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHH
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccH
Confidence            334556777797 8899999999998873  6999998876655443333

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.49  E-value=0.016  Score=43.15  Aligned_cols=63  Identities=11%  Similarity=0.101  Sum_probs=49.4

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      .++|.|. +.+|..+++.|.+.|.+|+++..+++...+..+...     ...+.++..|.++++.++++
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~-----~~~~~vi~Gd~~d~~~L~~a   67 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA   67 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh-----cCCcEEEEccCcchHHHHHh
Confidence            4777787 689999999999999999999988765544444332     13577899999999887766

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.46  E-value=0.0044  Score=50.85  Aligned_cols=42  Identities=29%  Similarity=0.322  Sum_probs=36.5

Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      .+.+|++|+||||||+.....+.+.+.++++..+..|.....
T Consensus        74 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~  115 (254)
T d1hdca_          74 REEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVF  115 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHH
T ss_pred             HHHcCCccEEEecCccccccccccccccccchhhhHHhhHHH
Confidence            467899999999999999999999999999999888876543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.45  E-value=0.013  Score=41.60  Aligned_cols=39  Identities=23%  Similarity=0.291  Sum_probs=34.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      .+++||.++|.|+ |.+|..-++.|.+.|++|++.+....
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            3789999999999 55999999999999999999876544

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.0076  Score=50.44  Aligned_cols=35  Identities=23%  Similarity=0.292  Sum_probs=28.9

Q ss_pred             CCc-EEEEcCC------------------CCchhHHHHHHHHHcCCeEEEEecC
Q psy9256          45 NNK-VVWITGA------------------SSGIGEALALQLSKCGAKLVLSARS   79 (265)
Q Consensus        45 ~gk-~vlItGa------------------s~GIG~aia~~l~~~G~~V~~~~r~   79 (265)
                      .|| +||||.|                  ||..|.++|+.+...|+.|+++.+.
T Consensus        16 ~g~k~VLITaG~T~epID~~pVR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          16 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             cCCcEEEEccCCcCcccCCCCceEeCCCCchHHHHHHHHHHHHcCCEEEEEecC
Confidence            344 5889977                  5569999999999999999998654

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.43  E-value=0.003  Score=48.77  Aligned_cols=80  Identities=16%  Similarity=0.250  Sum_probs=53.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH-HHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY-HRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~  120 (265)
                      --+|.+++|.|+ +|+|...+..+...|+ +|+.+++++++++.+++    .++   .   ...|.++.+. ....   .
T Consensus        25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~----lGa---~---~~i~~~~~d~~~~~~---~   90 (174)
T d1p0fa2          25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGA---T---ECLNPKDYDKPIYEV---I   90 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTC---S---EEECGGGCSSCHHHH---H
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH----cCC---c---EEEcCCCchhHHHHH---H
Confidence            446899999986 8999999999988887 68888999888866544    332   1   1123333221 2211   1


Q ss_pred             HHHh-CCccEEEeCCCC
Q psy9256         121 IQQF-GCLDILINNAGR  136 (265)
Q Consensus       121 ~~~~-g~ldilinnAg~  136 (265)
                      +... +..|++|.++|.
T Consensus        91 ~~~~~~G~d~vid~~g~  107 (174)
T d1p0fa2          91 CEKTNGGVDYAVECAGR  107 (174)
T ss_dssp             HHHTTSCBSEEEECSCC
T ss_pred             HHhcCCCCcEEEEcCCC
Confidence            2222 579999999884

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.42  E-value=0.0047  Score=50.74  Aligned_cols=48  Identities=15%  Similarity=0.120  Sum_probs=28.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC---eEEEEecC---CCcHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA---KLVLSARS---SSNLERVKNLCVQ   92 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~---~V~~~~r~---~~~~~~~~~~~~~   92 (265)
                      .|-.+++++=+..-..+++.++.+.|.   ++....-+   ++..+++.+.+.+
T Consensus        28 ~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_          28 EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            477788888766666778888877653   24444333   3344444444433

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.41  E-value=0.011  Score=45.11  Aligned_cols=80  Identities=20%  Similarity=0.276  Sum_probs=52.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEE-EEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLV-LSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .--+|.+++|.|+ +++|...+..+...|++++ ++++++++++.+++    ++.  .+    ..|..+++..    +.+
T Consensus        25 ~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~----~Ga--~~----~i~~~~~~~~----~~i   89 (174)
T d1f8fa2          25 KVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----LGA--TH----VINSKTQDPV----AAI   89 (174)
T ss_dssp             CCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----HTC--SE----EEETTTSCHH----HHH
T ss_pred             CCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH----cCC--eE----EEeCCCcCHH----HHH
Confidence            3446889999987 8999999988878888755 45666655554433    332  11    2455554433    334


Q ss_pred             HHHh-CCccEEEeCCCC
Q psy9256         121 IQQF-GCLDILINNAGR  136 (265)
Q Consensus       121 ~~~~-g~ldilinnAg~  136 (265)
                      ++.+ ++.|++|.+.|.
T Consensus        90 ~~~t~gg~D~vid~~G~  106 (174)
T d1f8fa2          90 KEITDGGVNFALESTGS  106 (174)
T ss_dssp             HHHTTSCEEEEEECSCC
T ss_pred             HHHcCCCCcEEEEcCCc
Confidence            4444 579999999983

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.39  E-value=0.0039  Score=47.32  Aligned_cols=76  Identities=21%  Similarity=0.239  Sum_probs=50.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|.+++|.|+ +++|...+..+...|++|+.+++++++++.++    +.++   .   ...|.++.+..+.+    ++..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~----~~Ga---~---~~i~~~~~~~~~~~----~~~~   91 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR----KLGA---S---LTVNARQEDPVEAI----QRDI   91 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTC---S---EEEETTTSCHHHHH----HHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh----ccCc---c---ccccccchhHHHHH----HHhh
Confidence            5889999886 89999988888788999999999877765443    3432   1   12355555544333    4444


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                      +..+..|-++|
T Consensus        92 ~g~~~~i~~~~  102 (166)
T d1llua2          92 GGAHGVLVTAV  102 (166)
T ss_dssp             SSEEEEEECCS
T ss_pred             cCCcccccccc
Confidence            44554444444

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.38  E-value=0.0051  Score=49.93  Aligned_cols=86  Identities=16%  Similarity=0.172  Sum_probs=56.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.|++++=+.   ..+.+...+.|.++...--+....+...+...+.                           .+.+
T Consensus        28 ~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i---------------------------~~~~   77 (241)
T d2a4ka1          28 EGASLVAVDREE---RLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEA---------------------------LEEF   77 (241)
T ss_dssp             TTCEEEEEESCH---HHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHH---------------------------HHHH
T ss_pred             CCCEEEEEECCH---HHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHH---------------------------HHHh
Confidence            466788887554   2344444455767665555555555555543332                           4568


Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      |++|+||||||+.....+.+.+.++++..++.|...
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~  113 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTG  113 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHH
T ss_pred             CCccEeccccccccccchhhhhcccccccccccccc
Confidence            999999999999999999999999999888777643

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.35  E-value=0.0049  Score=50.77  Aligned_cols=88  Identities=17%  Similarity=0.174  Sum_probs=59.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-...++..+...|. +....-+-...+.+.+..++                       +    .+.+
T Consensus        29 ~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~Dv~~~~~v~~~~~~-----------------------~----~~~~   80 (268)
T d2bgka1          29 YGAKVVIADIADDHGQKVCNNIGSPDV-ISFVHCDVTKDEDVRNLVDT-----------------------T----IAKH   80 (268)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHCCTTT-EEEEECCTTCHHHHHHHHHH-----------------------H----HHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHhcCCCc-eEEEEccCCCHHHHHHHHHH-----------------------H----HHHc
Confidence            466788888777777778887765554 33333344444444443322                       2    3568


Q ss_pred             CCccEEEeCCCCCccc--ccchhhhHHHHHhhhcccCC
Q psy9256         125 GCLDILINNAGRSQRA--AWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       125 g~ldilinnAg~~~~~--~~~~~~~~~~~~~~~~~~~~  160 (265)
                      |++|+||||||+....  .+.+.+.++++..+..|...
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g  118 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG  118 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHH
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcc
Confidence            9999999999986554  46788888898888777654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.35  E-value=0.0069  Score=49.62  Aligned_cols=90  Identities=16%  Similarity=0.096  Sum_probs=67.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++=+..-..++++.+...|.++....-+....+++.+...+.                           ++.+
T Consensus        29 ~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~---------------------------~~~~   81 (258)
T d1ae1a_          29 LGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTV---------------------------AHVF   81 (258)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------------------------HHHT
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHH---------------------------HHHh
Confidence            4678889888777667788888888887766555555555554433322                           3445


Q ss_pred             -CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCc
Q psy9256         125 -GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       125 -g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (265)
                       |++|++|||||+.....+.+.+.++++..+..|....
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~  119 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAA  119 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHH
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhccccc
Confidence             6899999999999999999999999999888887653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.34  E-value=0.017  Score=44.36  Aligned_cols=79  Identities=15%  Similarity=0.200  Sum_probs=51.2

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChH-HHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTK-YHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~  121 (265)
                      -+|.+|+|.|+ +|+|...+..+...|++ |+++++++++++.+++    .++   . .+  .|..+.+ ......+.  
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~----~Ga---~-~~--i~~~~~~~~~~~~~~~--   93 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGA---T-DC--LNPRELDKPVQDVITE--   93 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC---S-EE--ECGGGCSSCHHHHHHH--
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH----hCC---C-cc--cCCccchhhhhhhHhh--
Confidence            46889999975 99999999999999985 7778888887654443    332   1 11  2322221 22222111  


Q ss_pred             HHhCCccEEEeCCC
Q psy9256         122 QQFGCLDILINNAG  135 (265)
Q Consensus       122 ~~~g~ldilinnAg  135 (265)
                      ..-+..|+.|.++|
T Consensus        94 ~~~~G~d~vie~~G  107 (174)
T d1e3ia2          94 LTAGGVDYSLDCAG  107 (174)
T ss_dssp             HHTSCBSEEEESSC
T ss_pred             hhcCCCcEEEEecc
Confidence            12367999999999

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0068  Score=49.50  Aligned_cols=87  Identities=23%  Similarity=0.234  Sum_probs=56.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++=+    .+-.+.+.++.-++....-+....+.+.+..++.                           .+.+
T Consensus        29 ~Ga~V~i~~r~----~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~---------------------------~~~~   77 (250)
T d1ydea1          29 SGARVVICDKD----ESGGRALEQELPGAVFILCDVTQEDDVKTLVSET---------------------------IRRF   77 (250)
T ss_dssp             TTCEEEEEESC----HHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHH---------------------------HHHH
T ss_pred             CCCEEEEEECC----HHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHH---------------------------HHhc
Confidence            46667776543    3444555555444444444444555544443321                           4678


Q ss_pred             CCccEEEeCCCCCcc-cccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQR-AAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+..+ ..+++.+.++++..++.|.....
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~  116 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY  116 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHH
Confidence            999999999998654 46778899999999888875433

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.30  E-value=0.005  Score=50.26  Aligned_cols=46  Identities=17%  Similarity=0.213  Sum_probs=36.7

Q ss_pred             HHHHHHHhCCccEEEeCCCCCcc-cccchhhhHHHHHhhhcccCCce
Q psy9256         117 FDAVIQQFGCLDILINNAGRSQR-AAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       117 ~~~~~~~~g~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      ++++.+++|++|+||||||+... ..+.+.+.++++..+..|.....
T Consensus        62 ~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~  108 (252)
T d1zmta1          62 IEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPF  108 (252)
T ss_dssp             HHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence            45567889999999999998654 57788899999988877775443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.28  E-value=0.0033  Score=48.03  Aligned_cols=77  Identities=25%  Similarity=0.210  Sum_probs=51.6

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -+|.+++|.|+ +++|...+......|++|+.+++++++++.+++    .++   .. ++  |..+.+.      ..++.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~----lGa---~~-~i--~~~~~~~------~~~~~   88 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGA---DH-YI--ATLEEGD------WGEKY   88 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTC---SE-EE--EGGGTSC------HHHHS
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc----cCC---cE-Ee--eccchHH------HHHhh
Confidence            36889999987 899999887777789999999999988876544    342   11 11  2222211      11233


Q ss_pred             hCCccEEEeCCCCC
Q psy9256         124 FGCLDILINNAGRS  137 (265)
Q Consensus       124 ~g~ldilinnAg~~  137 (265)
                      .+..|.+|.+.|..
T Consensus        89 ~~~~d~vi~~~~~~  102 (168)
T d1piwa2          89 FDTFDLIVVCASSL  102 (168)
T ss_dssp             CSCEEEEEECCSCS
T ss_pred             hcccceEEEEecCC
Confidence            46788888877753

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.28  E-value=0.0036  Score=48.32  Aligned_cols=77  Identities=19%  Similarity=0.184  Sum_probs=53.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +|.+++|.|+ +|+|...+......|+ +|+.+++++++++.+++    .++   .   ..+|..+.+..    +.+.+.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~----lGa---~---~~i~~~~~~~~----~~v~~~   91 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF----YGA---T---DILNYKNGHIE----DQVMKL   91 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH----HTC---S---EEECGGGSCHH----HHHHHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh----hCc---c---ccccccchhHH----HHHHHH
Confidence            5889999987 8999998888888898 58889988776655543    332   1   22454444333    344555


Q ss_pred             h--CCccEEEeCCCC
Q psy9256         124 F--GCLDILINNAGR  136 (265)
Q Consensus       124 ~--g~ldilinnAg~  136 (265)
                      +  ...|++|.++|.
T Consensus        92 t~g~G~D~vid~~g~  106 (174)
T d1jqba2          92 TNGKGVDRVIMAGGG  106 (174)
T ss_dssp             TTTSCEEEEEECSSC
T ss_pred             hhccCcceEEEccCC
Confidence            5  349999999984

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.25  E-value=0.0064  Score=49.36  Aligned_cols=38  Identities=24%  Similarity=0.330  Sum_probs=33.4

Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      |++|+||||||+.....+.+.+.++++..++.|.....
T Consensus        73 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~  110 (242)
T d1cyda_          73 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF  110 (242)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccch
Confidence            78999999999999999999999999999887775443

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.23  E-value=0.0011  Score=53.91  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=31.4

Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      .+.+|++|+||||||+.....+.+.+.++++..++.|.....
T Consensus        68 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~  109 (237)
T d1uzma1          68 EEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAF  109 (237)
T ss_dssp             HHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHH
T ss_pred             HHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhh
Confidence            356899999999999998889999999999999888775433

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.18  E-value=0.0065  Score=47.19  Aligned_cols=78  Identities=14%  Similarity=0.218  Sum_probs=49.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .+++|+|+||++|+|...+.-....|++++++ ++++++..++   ..+.++   .   ...|..+++..+.+    ++.
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l---~~~~ga---d---~vi~~~~~~~~~~~----~~~   96 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFL---TSELGF---D---AAVNYKTGNVAEQL----REA   96 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHH---HHHSCC---S---EEEETTSSCHHHHH----HHH
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhh---hhcccc---e---EEeeccchhHHHHH----HHH
Confidence            45899999999999999888777789975554 5444433332   223332   1   33455555433333    333


Q ss_pred             h-CCccEEEeCCC
Q psy9256         124 F-GCLDILINNAG  135 (265)
Q Consensus       124 ~-g~ldilinnAg  135 (265)
                      . ...|+++.+.|
T Consensus        97 ~~~GvDvv~D~vG  109 (187)
T d1vj1a2          97 CPGGVDVYFDNVG  109 (187)
T ss_dssp             CTTCEEEEEESSC
T ss_pred             hccCceEEEecCC
Confidence            3 45999999998

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.18  E-value=0.01  Score=48.71  Aligned_cols=89  Identities=22%  Similarity=0.255  Sum_probs=67.0

Q ss_pred             CCcEEEEcCCCC-chhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASS-GIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++... ..-..++..+.+.|.++....-+....+.+.+.++..                           .+.
T Consensus        41 ~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~---------------------------~~~   93 (272)
T d1g0oa_          41 RGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA---------------------------VKI   93 (272)
T ss_dssp             TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------------------------HHH
T ss_pred             cCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHH---------------------------HHH
Confidence            466778887653 4556778888888888877766666666665554322                           467


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      +|++|++|||||......+.+.+.++++..+..|...
T Consensus        94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~  130 (272)
T d1g0oa_          94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRG  130 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             hCCCCccccccccchhhhhhhhhhhHHHHHhhhccce
Confidence            7999999999999999999999999999887766543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.16  E-value=0.0033  Score=48.59  Aligned_cols=53  Identities=21%  Similarity=0.376  Sum_probs=44.4

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHh
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQA   93 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   93 (265)
                      ....+++||.++|.|+ +|.+++++..|.+.| +|.+..|+.++.+++.+.+...
T Consensus        11 ~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          11 EEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             HHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             HhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            3456789999999988 789999999998777 8999999999988887776543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.16  E-value=0.015  Score=42.14  Aligned_cols=58  Identities=17%  Similarity=0.114  Sum_probs=44.2

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRC  116 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~  116 (265)
                      |+++|.|. +.+|..+++.|.  |..|+++..+++..+....         ....++..|.++++.++++
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~---------~~~~~i~Gd~~~~~~L~~a   58 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKA   58 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH---------TTCEEEESCTTSHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh---------cCccccccccCCHHHHHHh
Confidence            56888886 779999999984  5567888888776654432         2467788999999887766

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.09  E-value=0.015  Score=43.42  Aligned_cols=38  Identities=21%  Similarity=0.330  Sum_probs=29.0

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLER   85 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~   85 (265)
                      |.+.|.|+ +.+|..+|..++.+|  ..+++.+++++.++.
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g   41 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKA   41 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhh
Confidence            34556685 889999999999887  369999987765543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.02  E-value=0.035  Score=41.91  Aligned_cols=78  Identities=21%  Similarity=0.293  Sum_probs=49.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCC-hHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ-TKYHRRCFDAVI  121 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~  121 (265)
                      -+|.+++|.|+ +|+|...+..+...|+. |+.+++++++++.++    ++++   .. +  .|..+ .+...+.   .+
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak----~lGa---~~-~--i~~~~~~~~~~~~---~~   92 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK----EFGA---TE-C--INPQDFSKPIQEV---LI   92 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HHTC---SE-E--ECGGGCSSCHHHH---HH
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH----HhCC---cE-E--EeCCchhhHHHHH---HH
Confidence            46899999998 59999998888888975 666677777765443    3342   11 1  22222 1222222   22


Q ss_pred             HHh-CCccEEEeCCC
Q psy9256         122 QQF-GCLDILINNAG  135 (265)
Q Consensus       122 ~~~-g~ldilinnAg  135 (265)
                      +.. +..|++|.+.|
T Consensus        93 ~~~~~g~D~vid~~G  107 (176)
T d2fzwa2          93 EMTDGGVDYSFECIG  107 (176)
T ss_dssp             HHTTSCBSEEEECSC
T ss_pred             HHcCCCCcEeeecCC
Confidence            333 57999999998

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.02  E-value=0.046  Score=40.59  Aligned_cols=32  Identities=38%  Similarity=0.512  Sum_probs=27.2

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCC--eEEEEecCC
Q psy9256          49 VWITGASSGIGEALALQLSKCGA--KLVLSARSS   80 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~   80 (265)
                      +.|.||++.+|.++|..++.+|.  .+++.+.++
T Consensus         3 v~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~   36 (144)
T d1mlda1           3 VAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (144)
T ss_dssp             EEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             EEEECCCChHHHHHHHHHHhCCccceEEEEeccc
Confidence            67889999999999999998874  488888765

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.98  E-value=0.019  Score=43.87  Aligned_cols=41  Identities=17%  Similarity=0.271  Sum_probs=34.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      +++-+.|- +-+|.++|++|++.|++|+..+|++++.+++.+
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~   43 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA   43 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            34556676 789999999999999999999999988877654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.97  E-value=0.029  Score=41.59  Aligned_cols=38  Identities=26%  Similarity=0.257  Sum_probs=27.4

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLER   85 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~   85 (265)
                      .|.++| |+ +.+|..+|..++..+-  .+++.+++++..+.
T Consensus         2 ~KI~II-Ga-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g   41 (142)
T d1y6ja1           2 SKVAII-GA-GFVGASAAFTMALRQTANELVLIDVFKEKAIG   41 (142)
T ss_dssp             CCEEEE-CC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCH
T ss_pred             CeEEEE-CC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccce
Confidence            355555 86 9999999999998864  69999988765543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=95.92  E-value=0.03  Score=42.10  Aligned_cols=42  Identities=21%  Similarity=0.088  Sum_probs=31.4

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNL   89 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~   89 (265)
                      +.+.|.|+ +.+|..+|..++..+ +++++.+.+++.++.....
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~D   50 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALD   50 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHH
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHH
Confidence            34555687 889999999988887 4799999888766544433

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.88  E-value=0.074  Score=42.92  Aligned_cols=47  Identities=13%  Similarity=0.032  Sum_probs=28.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCc---HHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKC--GAKLVLSARSSSN---LERVKNLCV   91 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~---~~~~~~~~~   91 (265)
                      .|-.+++++-+.--....+..+.+.  +.++....-+...   .+++.+.+.
T Consensus        26 ~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (254)
T d2gdza1          26 KGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV   77 (254)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            5778889887777777777777654  4455554434333   444444443

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.83  E-value=0.0028  Score=49.89  Aligned_cols=77  Identities=19%  Similarity=0.277  Sum_probs=50.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +|.+++|.|+ +++|...+......|+ +|+++++++++++.+++    .+   ..   ...|-.+.+..++    +.+.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~----~G---a~---~~~~~~~~~~~~~----i~~~   89 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QG---FE---IADLSLDTPLHEQ----IAAL   89 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TT---CE---EEETTSSSCHHHH----HHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh----cc---cc---EEEeCCCcCHHHH----HHHH
Confidence            6889999987 7999888877767777 68888888777655443    33   11   1223333333222    2333


Q ss_pred             h--CCccEEEeCCCC
Q psy9256         124 F--GCLDILINNAGR  136 (265)
Q Consensus       124 ~--g~ldilinnAg~  136 (265)
                      +  +..|+.|.+.|.
T Consensus        90 t~g~g~D~vid~vG~  104 (195)
T d1kola2          90 LGEPEVDCAVDAVGF  104 (195)
T ss_dssp             HSSSCEEEEEECCCT
T ss_pred             hCCCCcEEEEECccc
Confidence            3  468999999984

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.82  E-value=0.016  Score=46.75  Aligned_cols=91  Identities=13%  Similarity=0.154  Sum_probs=57.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      .|-.+++++-+..-..++. .+.+.+.++....-+....+...+.....                    +.     ...+
T Consensus        28 ~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i--------------------~~-----~~~~   81 (248)
T d1snya_          28 PPQHLFTTCRNREQAKELE-DLAKNHSNIHILEIDLRNFDAYDKLVADI--------------------EG-----VTKD   81 (248)
T ss_dssp             CCSEEEEEESCTTSCHHHH-HHHHHCTTEEEEECCTTCGGGHHHHHHHH--------------------HH-----HHGG
T ss_pred             CCCEEEEEECCHHHHHHHH-HHHhcCCcEEEEEEEeccHHHHHHHHhhh--------------------HH-----Hhhc
Confidence            4667888877666556654 45555666655544443333333322211                    11     1356


Q ss_pred             CCccEEEeCCCCCccc-ccchhhhHHHHHhhhcccCCc
Q psy9256         125 GCLDILINNAGRSQRA-AWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       125 g~ldilinnAg~~~~~-~~~~~~~~~~~~~~~~~~~~~  161 (265)
                      +++|+||||||+.... ...+.+.++++..+..|....
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~  119 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVP  119 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHH
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccH
Confidence            8999999999996555 567788888888887776543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.79  E-value=0.0035  Score=47.46  Aligned_cols=43  Identities=23%  Similarity=0.264  Sum_probs=35.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      +|.+++|.|+ +++|...+..+...|++|+.+++++++++.+++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~   69 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE   69 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh
Confidence            5889999875 899999888888899999999988877654433

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.78  E-value=0.0066  Score=46.33  Aligned_cols=41  Identities=17%  Similarity=0.240  Sum_probs=34.6

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      |++-|.|+ |.+|.++|..|++.|++|.+.+|+++..+...+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            56777788 889999999999999999999998877665543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.78  E-value=0.044  Score=40.73  Aligned_cols=81  Identities=27%  Similarity=0.292  Sum_probs=49.4

Q ss_pred             EEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCC--cHHHHHHHHHHh-CCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          49 VWITGASSGIGEALALQLSKCG--AKLVLSARSSS--NLERVKNLCVQA-GAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~--~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +.|.||++.+|..+|..++..|  .++++.++++.  +++.....+... .....+......--.+.+           .
T Consensus         3 V~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~-----------~   71 (145)
T d1hyea1           3 VTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR-----------I   71 (145)
T ss_dssp             EEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG-----------G
T ss_pred             EEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHH-----------H
Confidence            6788999999999999999988  47999998753  233333333332 111222222211111222           2


Q ss_pred             hCCccEEEeCCCCCccc
Q psy9256         124 FGCLDILINNAGRSQRA  140 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~  140 (265)
                      ..+-|++|.+||..++.
T Consensus        72 l~~aDvVVitAG~~~~~   88 (145)
T d1hyea1          72 IDESDVVIITSGVPRKE   88 (145)
T ss_dssp             GTTCSEEEECCSCCCCT
T ss_pred             hccceEEEEecccccCC
Confidence            34569999999985543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.73  E-value=0.046  Score=41.34  Aligned_cols=84  Identities=13%  Similarity=0.124  Sum_probs=52.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHHhCCC-CCcEEEEeecCCChHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQAGAH-PQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ..++...+.|.|+ |.+|..+|..+...|.  .+++.+++++..+.....+...... +.......   .+.+       
T Consensus        15 ~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~---~d~~-------   83 (159)
T d2ldxa1          15 DKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG---KDYN-------   83 (159)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE---SSGG-------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec---cchh-------
Confidence            3444444666686 8899999999998864  6999998876655444444432211 11222222   2222       


Q ss_pred             HHHHHhCCccEEEeCCCCCccc
Q psy9256         119 AVIQQFGCLDILINNAGRSQRA  140 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~~~  140 (265)
                          ...+-|++|..||..++.
T Consensus        84 ----~~~~adivvitag~~~~~  101 (159)
T d2ldxa1          84 ----VSANSKLVIITAGARMVS  101 (159)
T ss_dssp             ----GGTTEEEEEECCSCCCCT
T ss_pred             ----hhccccEEEEecccccCC
Confidence                235669999999986655

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.69  E-value=0.042  Score=40.89  Aligned_cols=78  Identities=26%  Similarity=0.247  Sum_probs=45.8

Q ss_pred             EEEcCCCCchhHHHHHHHHHc---CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          49 VWITGASSGIGEALALQLSKC---GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +.|+|+++.+|.++|..++.+   +..+.+.+..+ ..+.....+..... .... .....-.+.+.           ..
T Consensus         3 V~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~-~~~~-~~~~~~~~~~~-----------~~   68 (145)
T d2cmda1           3 VAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPT-AVKI-KGFSGEDATPA-----------LE   68 (145)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCS-SCEE-EEECSSCCHHH-----------HT
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCcc-ccCC-cEEEcCCCccc-----------cC
Confidence            568899999999999988643   46799998754 33322222222211 1111 11222333332           24


Q ss_pred             CccEEEeCCCCCccc
Q psy9256         126 CLDILINNAGRSQRA  140 (265)
Q Consensus       126 ~ldilinnAg~~~~~  140 (265)
                      .-|++|..||..++.
T Consensus        69 ~aDvvvitaG~~~k~   83 (145)
T d2cmda1          69 GADVVLISAGVRRKP   83 (145)
T ss_dssp             TCSEEEECCSCCCCT
T ss_pred             CCCEEEECCCccCCC
Confidence            559999999986544

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.67  E-value=0.047  Score=40.25  Aligned_cols=36  Identities=25%  Similarity=0.327  Sum_probs=27.5

Q ss_pred             EEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHH
Q psy9256          49 VWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLER   85 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~   85 (265)
                      +.|.|+ +.+|..+|..++..+  .++++.+++++.++.
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g   40 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEG   40 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccc
Confidence            344586 789999999998876  469999988765543

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.66  E-value=0.0042  Score=50.11  Aligned_cols=39  Identities=21%  Similarity=0.301  Sum_probs=33.8

Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      +++|++|+||||||+.....+.+.+.++++..++.|...
T Consensus        62 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~  100 (234)
T d1o5ia_          62 EKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLN  100 (234)
T ss_dssp             HHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHH
T ss_pred             HHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhh
Confidence            467899999999999888889999999999888877653

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=95.52  E-value=0.039  Score=41.81  Aligned_cols=41  Identities=20%  Similarity=0.250  Sum_probs=31.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLER   85 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~   85 (265)
                      ++.+.+.|.|+ +.+|.++|..++..|.  .+++.+++++..+.
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g   60 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKG   60 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHH
Confidence            34445666686 8899999999999884  69999987655543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.50  E-value=0.035  Score=42.07  Aligned_cols=76  Identities=16%  Similarity=0.248  Sum_probs=48.4

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +|.+++|.|+ +++|...+..+...|+ +|+.+++++++++.++    +.+.  .  .  ..|.++ +..+.    ..+.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~~ga--~--~--~i~~~~-~~~~~----~~~~   95 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGA--D--H--VVDARR-DPVKQ----VMEL   95 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTC--S--E--EEETTS-CHHHH----HHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----hccc--c--e--eecCcc-cHHHH----HHHh
Confidence            5889999886 9999998888877786 5666777766554443    3332  1  1  123332 22222    2333


Q ss_pred             h--CCccEEEeCCCC
Q psy9256         124 F--GCLDILINNAGR  136 (265)
Q Consensus       124 ~--g~ldilinnAg~  136 (265)
                      .  ...|++|+++|.
T Consensus        96 ~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          96 TRGRGVNVAMDFVGS  110 (172)
T ss_dssp             TTTCCEEEEEESSCC
T ss_pred             hCCCCceEEEEecCc
Confidence            3  359999999994

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.50  E-value=0.011  Score=44.78  Aligned_cols=75  Identities=20%  Similarity=0.237  Sum_probs=52.4

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -+|.+++|.|+ +|+|...+......|++++++++++++.+.++    +.++   .   ...|..+.+..       ...
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~----~lGa---d---~~i~~~~~~~~-------~~~   90 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK----ALGA---D---EVVNSRNADEM-------AAH   90 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HHTC---S---EEEETTCHHHH-------HTT
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh----ccCC---c---EEEECchhhHH-------HHh
Confidence            36899999986 89999988877788999999998887765443    3442   1   22455554432       223


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                      .+..|..|.++|.
T Consensus        91 ~~~~D~vid~~g~  103 (168)
T d1uufa2          91 LKSFDFILNTVAA  103 (168)
T ss_dssp             TTCEEEEEECCSS
T ss_pred             cCCCceeeeeeec
Confidence            3678999988884

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.47  E-value=0.012  Score=44.70  Aligned_cols=81  Identities=16%  Similarity=0.270  Sum_probs=51.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      .--+|.+++|.|+ +|+|...+..+...|+ +|+.+++++++++.+++    +++   . +  ..|.++.+..   .+..
T Consensus        25 ~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~----~GA---d-~--~in~~~~~~~---~~~~   90 (175)
T d1cdoa2          25 KVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGA---T-D--FVNPNDHSEP---ISQV   90 (175)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC---C-E--EECGGGCSSC---HHHH
T ss_pred             CCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH----cCC---c-E--EEcCCCcchh---HHHH
Confidence            3346889999986 6788888888877776 58888888888765544    442   1 1  2233332211   1112


Q ss_pred             HHHh--CCccEEEeCCCC
Q psy9256         121 IQQF--GCLDILINNAGR  136 (265)
Q Consensus       121 ~~~~--g~ldilinnAg~  136 (265)
                      .+..  +..|+++.++|.
T Consensus        91 ~~~~~~~G~d~vid~~G~  108 (175)
T d1cdoa2          91 LSKMTNGGVDFSLECVGN  108 (175)
T ss_dssp             HHHHHTSCBSEEEECSCC
T ss_pred             HHhhccCCcceeeeecCC
Confidence            2222  579999999994

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.44  E-value=0.007  Score=41.52  Aligned_cols=38  Identities=16%  Similarity=0.054  Sum_probs=33.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      +++||.++|.|. +.-|.++|+.|.+.|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999998 66899999999999999999987553

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.0046  Score=50.27  Aligned_cols=37  Identities=24%  Similarity=0.334  Sum_probs=32.8

Q ss_pred             CCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCc
Q psy9256         125 GCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPS  161 (265)
Q Consensus       125 g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (265)
                      |++|+||||||+.....+.+.+.++++..+..|....
T Consensus        75 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~  111 (244)
T d1pr9a_          75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAV  111 (244)
T ss_dssp             CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHH
T ss_pred             CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhh
Confidence            7899999999999999999999999999988877543

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=95.40  E-value=0.11  Score=39.64  Aligned_cols=24  Identities=21%  Similarity=0.254  Sum_probs=21.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHc
Q psy9256          46 NKVVWITGASSGIGEALALQLSKC   69 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~   69 (265)
                      ...+.||||++.||..++..|++.
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g   47 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASG   47 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcC
Confidence            346999999999999999999874

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.37  E-value=0.015  Score=44.35  Aligned_cols=44  Identities=25%  Similarity=0.385  Sum_probs=37.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNL   89 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~   89 (265)
                      ++|.++|.|+ ||.+++++..|.+.|+ +|.+..|+.++.+.+.+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~   60 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL   60 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh
Confidence            5778888888 8999999999999997 688999988777666543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=95.35  E-value=0.027  Score=41.65  Aligned_cols=78  Identities=18%  Similarity=0.156  Sum_probs=48.5

Q ss_pred             EEEcCCCCchhHHHHHHHHHcC--CeEEEEecCCCcHHHHHHHHHHhCC-CCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          49 VWITGASSGIGEALALQLSKCG--AKLVLSARSSSNLERVKNLCVQAGA-HPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +.|+|+ +.+|..++..++..|  ..+++.+++++..+.....+..... ...+......  .+.+           ...
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~-----------~~~   68 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA-----------DTA   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG-----------GGT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH-----------Hhc
Confidence            455586 899999999999987  5799999998776654333321110 0112222211  2222           245


Q ss_pred             CccEEEeCCCCCccc
Q psy9256         126 CLDILINNAGRSQRA  140 (265)
Q Consensus       126 ~ldilinnAg~~~~~  140 (265)
                      +-|++|..||..++.
T Consensus        69 dadvvvitag~~~~~   83 (142)
T d1guza1          69 NSDIVIITAGLPRKP   83 (142)
T ss_dssp             TCSEEEECCSCCCCT
T ss_pred             CCeEEEEEEecCCCC
Confidence            679999999985544

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.23  E-value=0.11  Score=38.42  Aligned_cols=31  Identities=19%  Similarity=0.310  Sum_probs=26.0

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCC--eEEEEecC
Q psy9256          49 VWITGASSGIGEALALQLSKCGA--KLVLSARS   79 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~--~V~~~~r~   79 (265)
                      +.|.|+++.+|.++|..+..+|.  .+++.+..
T Consensus         3 V~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~   35 (142)
T d1o6za1           3 VSVVGAAGTVGAAAGYNIALRDIADEVVFVDIP   35 (142)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCCSEEEEECCG
T ss_pred             EEEECCCCcHHHHHHHHHHhCCCCCEEEEEecC
Confidence            56779999999999999998874  58888853

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.20  E-value=0.005  Score=46.67  Aligned_cols=39  Identities=28%  Similarity=0.351  Sum_probs=31.7

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      +.|.|. +-+|.++|+.|.+.|++|+..+|+++..+++.+
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~   41 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE   41 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH
Confidence            444455 889999999999999999999998777665544

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.20  E-value=0.069  Score=41.14  Aligned_cols=146  Identities=12%  Similarity=0.078  Sum_probs=83.3

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhC----CC------------------------CCc
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAG----AH------------------------PQS   99 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~------------------------~~~   99 (265)
                      .+.|.|+ |=||..+|..++..|++|++.+++++.+++..+.+....    ..                        ..-
T Consensus         6 ~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a   84 (186)
T d1wdka3           6 QAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNV   84 (186)
T ss_dssp             SEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGGC
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeeccccccccccc
Confidence            4566688 669999999999999999999999887776555432110    00                        000


Q ss_pred             EEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC-----ceeeeeccccChhH
Q psy9256         100 IYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP-----SIYTLTLDVTQTKY  174 (265)
Q Consensus       100 ~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~dv~~~~~  174 (265)
                      -.++.+-.-+.+.=++++..+.+..++--|+..|...............+.+-+-.+-..+     =+-.....-|+++-
T Consensus        85 dlViEav~E~l~~K~~lf~~l~~~~~~~~IiaSnTS~l~i~~la~~~~~p~r~~g~Hf~nP~~~~~lVEiv~~~~T~~~~  164 (186)
T d1wdka3          85 DLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLA  164 (186)
T ss_dssp             SEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHH
T ss_pred             ceeeeeecchHHHHHHHHHHHHhhcCCCeeEEeccccccHHHHHHhccCchheEeeccccCcccCCeEEECCCCCCCHHH
Confidence            1245555666666667777776666666677777665544443333322222221111110     11123345556555


Q ss_pred             HHHHHHHHHhhcccccEEEec
Q psy9256         175 HRRCFDAVIQQFGCLDILINN  195 (265)
Q Consensus       175 v~~~~~~i~~~~g~ldilVnn  195 (265)
                      ++.+ .++.+..|+.-++++.
T Consensus       165 ~~~~-~~~~~~lgk~pv~v~d  184 (186)
T d1wdka3         165 VATT-VAYAKKMGKNPIVVND  184 (186)
T ss_dssp             HHHH-HHHHHHTTCEEEEEES
T ss_pred             HHHH-HHHHHHcCCEEEEEec
Confidence            5554 4445566776666643

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.17  E-value=0.04  Score=40.78  Aligned_cols=39  Identities=18%  Similarity=0.252  Sum_probs=33.3

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER   85 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~   85 (265)
                      |.+.|.||.+-+|..+|+.|.++|++|.+.+|+.....+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~   48 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAE   48 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccc
Confidence            457777988999999999999999999999998765443

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=94.98  E-value=0.045  Score=44.99  Aligned_cols=87  Identities=20%  Similarity=0.144  Sum_probs=59.9

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHH-cCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSK-CGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.|++++=+..-..+.++++.. .|.++....-+....+.+.+....                       .    .+.
T Consensus        48 ~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~-----------------------~----~~~  100 (294)
T d1w6ua_          48 LGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE-----------------------L----IKV  100 (294)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH-----------------------H----HHH
T ss_pred             cCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhh-----------------------h----hhh
Confidence            577888888877777777877764 466666655455555444433221                       1    467


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      +|++|++|||||+.....+...+.+++...+..+.
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~  135 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVL  135 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHH
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeec
Confidence            89999999999998888877777777666655443

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.94  E-value=0.29  Score=37.44  Aligned_cols=39  Identities=18%  Similarity=0.115  Sum_probs=34.2

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      ..++.++++.|.|. +.||+.+|+.+...|++|+..++..
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          39 SFEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceEEEEeec-ccchhhhhhhcccccceEeeccccc
Confidence            35789999999876 8999999999999999999998753

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.014  Score=45.53  Aligned_cols=44  Identities=23%  Similarity=0.262  Sum_probs=37.2

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCV   91 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   91 (265)
                      |.+.|.|+ |=+|..+|..++..|++|++.+++++.++++.+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            56777788 569999999999999999999999988887766554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=94.91  E-value=0.19  Score=37.00  Aligned_cols=37  Identities=30%  Similarity=0.511  Sum_probs=28.7

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLE   84 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~   84 (265)
                      .|+++| |+ +.+|.++|..++.+|.  .+++.+++++..+
T Consensus         2 ~Ki~II-Ga-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~   40 (143)
T d1llda1           2 TKLAVI-GA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVE   40 (143)
T ss_dssp             CEEEEE-CC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CEEEEE-CC-CHHHHHHHHHHHhcCCCcEEEEEEeccccch
Confidence            355555 86 8899999999998874  6999998775543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.84  E-value=0.056  Score=43.66  Aligned_cols=95  Identities=17%  Similarity=0.105  Sum_probs=62.0

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHc--CCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKC--GAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +|-.+++++=+..-..++++.+..+  +.++....-+-...+.+.+.....                       .+....
T Consensus        32 ~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~-----------------------~~~~~~   88 (259)
T d1oaaa_          32 PGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV-----------------------RELPRP   88 (259)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH-----------------------HHSCCC
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH-----------------------HHhhhh
Confidence            5778888887777777888888665  446666555544444444332211                       111223


Q ss_pred             HhCCccEEEeCCCCCc---ccccchhhhHHHHHhhhcccCCce
Q psy9256         123 QFGCLDILINNAGRSQ---RAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       123 ~~g~ldilinnAg~~~---~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      ..+++|++|||||+..   .+.+.+.+.++++..+..|....+
T Consensus        89 ~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~  131 (259)
T d1oaaa_          89 EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSML  131 (259)
T ss_dssp             TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHH
T ss_pred             ccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhH
Confidence            4678999999999853   446778888888888877775443

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.72  E-value=0.011  Score=44.00  Aligned_cols=36  Identities=22%  Similarity=0.380  Sum_probs=32.5

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS   79 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~   79 (265)
                      +++||.++|.|| |.+|..-++.|.+.|++|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            689999999999 559999999999999999999754

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.57  E-value=0.22  Score=40.17  Aligned_cols=91  Identities=15%  Similarity=0.077  Sum_probs=62.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHH-HcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLS-KCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      .|-.+++++=+..-...++.++. ..+..+.....+.+..+.........                           .+.
T Consensus        37 ~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------------------------~~~   89 (269)
T d1xu9a_          37 MGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA---------------------------GKL   89 (269)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH---------------------------HHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHH---------------------------HHH
Confidence            46678888766555555655554 44666666555555444444332221                           356


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCce
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      +|.+|++|||||+.....+.+.+.++++..+..|....+
T Consensus        90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~  128 (269)
T d1xu9a_          90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYV  128 (269)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHH
T ss_pred             hCCccccccccccccccccccCCHHHhhhheeeehhhHH
Confidence            799999999999999999999999999888877775443

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.41  E-value=0.1  Score=38.83  Aligned_cols=23  Identities=30%  Similarity=0.420  Sum_probs=20.9

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcC
Q psy9256          48 VVWITGASSGIGEALALQLSKCG   70 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G   70 (265)
                      .+.|+||++.+|..++..+++.+
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhcc
Confidence            58899999999999999999765

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=94.35  E-value=0.059  Score=43.38  Aligned_cols=32  Identities=16%  Similarity=0.089  Sum_probs=21.3

Q ss_pred             ccEEEeCCCCCccc----ccchhhhHHHHHhhhccc
Q psy9256         127 LDILINNAGRSQRA----AWEDIELEVDRELFTYAY  158 (265)
Q Consensus       127 ldilinnAg~~~~~----~~~~~~~~~~~~~~~~~~  158 (265)
                      +|+||||||+....    .+.+.+.++++..+..|.
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~  122 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSA  122 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHT
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhH
Confidence            69999999986543    344555666666655544

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=94.33  E-value=0.74  Score=36.69  Aligned_cols=62  Identities=19%  Similarity=0.146  Sum_probs=34.4

Q ss_pred             HHHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhh-cccccEEEeccccc
Q psy9256         121 IQQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQ-FGCLDILINNAGRS  199 (265)
Q Consensus       121 ~~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~-~g~ldilVnnAG~~  199 (265)
                      .+.+|++|+||||||+..        .+.++..++.|....+          .-++.++....++ .+..-.+||-++..
T Consensus        79 ~~~~g~iDilvnnAG~~~--------~~~~~~~~~vNl~g~~----------~~~~~~~~~m~~~~~~~~g~Ii~isS~~  140 (254)
T d1sbya1          79 FDQLKTVDILINGAGILD--------DHQIERTIAINFTGLV----------NTTTAILDFWDKRKGGPGGIIANICSVT  140 (254)
T ss_dssp             HHHHSCCCEEEECCCCCC--------TTCHHHHHHHHTHHHH----------HHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred             HHHcCCCCEEEeCCCCCC--------HHHHHHHHHHHhHHHH----------HHHHHHHHHhhhcccCCCceEEEEechh
Confidence            356799999999999754        3444555554443222          1133334444333 23445666665554


Q ss_pred             c
Q psy9256         200 Q  200 (265)
Q Consensus       200 ~  200 (265)
                      .
T Consensus       141 ~  141 (254)
T d1sbya1         141 G  141 (254)
T ss_dssp             G
T ss_pred             h
Confidence            3

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.12  E-value=0.082  Score=39.58  Aligned_cols=38  Identities=21%  Similarity=0.250  Sum_probs=30.2

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHH
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVK   87 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   87 (265)
                      +-+.| -+-+|.++|++|.++|++|...+|++++.+.+.
T Consensus         4 Ig~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           4 IAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            33444 488999999999999999999999876665543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=93.88  E-value=0.036  Score=41.00  Aligned_cols=37  Identities=24%  Similarity=0.196  Sum_probs=28.7

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHH
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLER   85 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~   85 (265)
                      |.. |.|+ +.+|.++|..++.++. ++++.+.+++..+.
T Consensus         3 KI~-IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~   40 (142)
T d1uxja1           3 KIS-IIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQG   40 (142)
T ss_dssp             EEE-EECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHH
T ss_pred             eEE-EECC-CHHHHHHHHHHHhCCcceEEEEeeccccchh
Confidence            444 4486 8899999999998874 79999988775544

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.86  E-value=0.3  Score=36.13  Aligned_cols=39  Identities=18%  Similarity=0.174  Sum_probs=29.1

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHH
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERV   86 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~   86 (265)
                      .|+ .|.|+ +++|..+|..+.+.+. ++++.+++++..+..
T Consensus         4 ~KI-~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~   43 (150)
T d1t2da1           4 AKI-VLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGK   43 (150)
T ss_dssp             CEE-EEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHH
T ss_pred             CeE-EEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceee
Confidence            354 45585 8999999998888774 689999888765543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=93.78  E-value=0.077  Score=41.61  Aligned_cols=44  Identities=20%  Similarity=0.418  Sum_probs=37.0

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLER   85 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~   85 (265)
                      ..++.||+++|-|- +.+|..+|+.|.+.|++|++.+.+.+.+..
T Consensus        22 ~~~L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          22 LGSLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            34799999999985 669999999999999999998877655543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.76  E-value=0.021  Score=45.99  Aligned_cols=47  Identities=21%  Similarity=0.313  Sum_probs=38.9

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      ..++.||+++|-|- +.+|..+|+.|.+.|++|+.++.+...++....
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~   80 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA   80 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH
Confidence            35699999999877 789999999999999999998877666554443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.73  E-value=0.071  Score=40.55  Aligned_cols=42  Identities=21%  Similarity=0.252  Sum_probs=36.6

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL   83 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~   83 (265)
                      .++.||+++|.|.|.=.|+.++..|.++|++|+.+..+...+
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            468999999999999999999999999999998876655443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.68  E-value=0.14  Score=38.09  Aligned_cols=38  Identities=26%  Similarity=0.364  Sum_probs=31.1

Q ss_pred             EEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          50 WITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        50 lItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      -|.|- +-+|.++|++|++.|++|+..+|++++.+++.+
T Consensus         4 giIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           4 GFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             EEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            34454 889999999999999999999998877766543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.62  E-value=0.061  Score=41.12  Aligned_cols=42  Identities=14%  Similarity=0.116  Sum_probs=37.3

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNL   83 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~   83 (265)
                      .++.||.++|.|.|.=.|+.++..|+++|++|..+..+...+
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l   76 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL   76 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence            478999999999999999999999999999999887655544

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=93.46  E-value=0.069  Score=42.41  Aligned_cols=36  Identities=11%  Similarity=-0.086  Sum_probs=23.9

Q ss_pred             HhCCccEEEeCCCCCcccccc-hhhhHHHHHhhhccc
Q psy9256         123 QFGCLDILINNAGRSQRAAWE-DIELEVDRELFTYAY  158 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~-~~~~~~~~~~~~~~~  158 (265)
                      .+|++|+||||||+...+.+. ..+.+.++..+..|.
T Consensus        68 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~  104 (235)
T d1ooea_          68 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSV  104 (235)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHH
T ss_pred             cCCCeeEEEECCcccccccccccCcHHHHhhHhhhHH
Confidence            479999999999986655433 333455665555443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.27  E-value=0.14  Score=39.39  Aligned_cols=41  Identities=24%  Similarity=0.216  Sum_probs=35.3

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      ..++.||++.|.|. +.||+++++.+...|++|+..+++...
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            34688999999886 899999999999999999998876544

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.22  E-value=0.086  Score=41.13  Aligned_cols=39  Identities=18%  Similarity=0.238  Sum_probs=34.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      .++.||++.|.|. |.||+.+|+.+..-|++|+..+++..
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            5789999999988 78999999999999999999987643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.18  E-value=0.12  Score=39.57  Aligned_cols=38  Identities=21%  Similarity=0.269  Sum_probs=33.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      .+.||++.|.|. +.||+.+++.+...|++|+..+|++.
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            489999999999 55999999999999999999988653

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.07  E-value=0.15  Score=39.16  Aligned_cols=42  Identities=19%  Similarity=0.118  Sum_probs=36.2

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      ...++.|+++.|.|. +.||.++++++...|++|+..++....
T Consensus        38 ~~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          38 HAYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             cceeccccceeeccc-cccchhhhhhhhccCceEEEEeecccc
Confidence            355789999999987 789999999999999999999886543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.77  E-value=0.1  Score=42.84  Aligned_cols=70  Identities=16%  Similarity=0.074  Sum_probs=50.1

Q ss_pred             HHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCccEEEeCCCCCcccc
Q psy9256          62 LALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAA  141 (265)
Q Consensus        62 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~  141 (265)
                      .++.+...|.++....-+....+...+.....                             ..|++|++|||||+...+.
T Consensus        48 ~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~-----------------------------~~g~idilvnnag~~~~~~   98 (285)
T d1jtva_          48 AARALACPPGSLETLQLDVRDSKSVAAARERV-----------------------------TEGRVDVLVCNAGLGLLGP   98 (285)
T ss_dssp             HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-----------------------------TTSCCSEEEECCCCCCCSC
T ss_pred             HHHHHhccCCceEEEeccccchHhhhhhhhhc-----------------------------cccchhhhhhccccccccc
Confidence            34444455667777666666665555443221                             1278999999999999999


Q ss_pred             cchhhhHHHHHhhhcccCC
Q psy9256         142 WEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~  160 (265)
                      +.+.+.++++..++.|..+
T Consensus        99 ~~~~~~e~~~~~~~vN~~g  117 (285)
T d1jtva_          99 LEALGEDAVASVLDVNVVG  117 (285)
T ss_dssp             GGGSCHHHHHHHHHHHTHH
T ss_pred             ccchhHhhhhhhhhcchhH
Confidence            9999999999988887654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.48  E-value=0.16  Score=38.39  Aligned_cols=26  Identities=4%  Similarity=-0.144  Sum_probs=19.0

Q ss_pred             HHHHHHHHHHhhhhcCCceEEEEccc
Q psy9256         224 LSLSRIATSYFLAREQGGHLVVTSSI  249 (265)
Q Consensus       224 ~~l~~~~~p~l~~~~~~g~IV~isS~  249 (265)
                      ...++.+.+.+.+..+.+-++++|--
T Consensus       123 ~~i~~~i~~~i~~~~pda~~i~vtNP  148 (169)
T d1s6ya1         123 IPVILDIIRDMEELCPDAWLINFTNP  148 (169)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEeCCh
Confidence            46677788888877767788877754

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.48  E-value=0.19  Score=37.84  Aligned_cols=36  Identities=25%  Similarity=0.310  Sum_probs=30.7

Q ss_pred             CCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHH
Q psy9256          54 ASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNL   89 (265)
Q Consensus        54 as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~   89 (265)
                      |-+-+|.++|++|++.|++|...+|++++.+++.+.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            447899999999999999999999988877766554

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=92.48  E-value=0.11  Score=38.96  Aligned_cols=69  Identities=17%  Similarity=-0.005  Sum_probs=49.7

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCC----------CCCcEEEEeecCCCh
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGA----------HPQSIYTLTLDVTQT  110 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~  110 (265)
                      +.-.+|+.||..||+.|   ..+..|+++|++|+.++.++..++.+.+...+...          ......++..|..+.
T Consensus        16 l~~~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l   92 (201)
T d1pjza_          16 LNVVPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL   92 (201)
T ss_dssp             HCCCTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred             cCCCCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccc
Confidence            34457899999999888   36778899999999999999888887776543211          123345677777665


Q ss_pred             HH
Q psy9256         111 KY  112 (265)
Q Consensus       111 ~~  112 (265)
                      ..
T Consensus        93 ~~   94 (201)
T d1pjza_          93 TA   94 (201)
T ss_dssp             TH
T ss_pred             cc
Confidence            43

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.43  E-value=0.34  Score=36.65  Aligned_cols=32  Identities=28%  Similarity=0.395  Sum_probs=26.9

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      +.|.|+ |..|.++|..|++.|.+|.+.+|+.+
T Consensus         3 I~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           3 VSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            445566 78999999999999999999998544

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.35  E-value=0.082  Score=40.37  Aligned_cols=37  Identities=24%  Similarity=0.218  Sum_probs=34.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEec
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSAR   78 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r   78 (265)
                      .++.||.++|.|-|.=.|+-+|..|+++|++|..+..
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~   61 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDV   61 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecc
Confidence            3799999999999999999999999999999987754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.30  E-value=0.12  Score=36.76  Aligned_cols=38  Identities=21%  Similarity=0.157  Sum_probs=31.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      +-.+|.++|.|| +-+|.++|..|++.|.+|.++.+.+.
T Consensus        27 ~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          27 DPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             CTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             ccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            345677888776 79999999999999999999988653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.17  E-value=0.075  Score=40.27  Aligned_cols=37  Identities=22%  Similarity=0.410  Sum_probs=33.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      .+.||+++|.|= +-+|+.+|+++...|++|+++.+++
T Consensus        21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp   57 (163)
T d1li4a1          21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDP   57 (163)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeeccc
Confidence            579999999987 4799999999999999999998876

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=92.13  E-value=0.078  Score=39.23  Aligned_cols=35  Identities=17%  Similarity=0.189  Sum_probs=30.7

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHH
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLE   84 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~   84 (265)
                      +.|.|+ +.||..++..|++.|++|.+++|+++..+
T Consensus         3 I~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~   37 (167)
T d1ks9a2           3 ITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYC   37 (167)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence            667788 99999999999999999999999876554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=92.11  E-value=0.17  Score=37.67  Aligned_cols=88  Identities=13%  Similarity=0.143  Sum_probs=52.7

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHHHHHHHHH--hCCCCCcEEEEeec----CCChHHHHHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLERVKNLCVQ--AGAHPQSIYTLTLD----VTQTKYHRRCFDA  119 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~D----~~~~~~~~~~~~~  119 (265)
                      .+.|.|+ +-||.++|+.|.+.|.  +|+..+|+++.++.+++.-..  ............+|    .+.++.+...++.
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~~~~~~vl~~   81 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKK   81 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHHH
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCCchhhhhhhhh
Confidence            4677776 8999999999999986  577788887777665543110  00000000000122    2234567777777


Q ss_pred             HHHHhCCccEEEeCCCC
Q psy9256         120 VIQQFGCLDILINNAGR  136 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~  136 (265)
                      ++.....-.+++-.++.
T Consensus        82 l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          82 LSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHSCTTCEEEECCSC
T ss_pred             hhccccccccccccccc
Confidence            77666665677766654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.10  E-value=0.11  Score=40.39  Aligned_cols=41  Identities=20%  Similarity=0.259  Sum_probs=36.0

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      ...++.||++.|.|. |.||+.+|+.+..-|++|+..++...
T Consensus        43 ~~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          43 GAARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             CceeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            346799999999988 88999999999999999999887654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.10  E-value=0.35  Score=35.69  Aligned_cols=23  Identities=26%  Similarity=0.351  Sum_probs=20.3

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcC
Q psy9256          48 VVWITGASSGIGEALALQLSKCG   70 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G   70 (265)
                      .+.|+||++.+|..++..|++.+
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHHH
Confidence            58899999999999999998654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.04  E-value=0.3  Score=38.43  Aligned_cols=77  Identities=13%  Similarity=-0.018  Sum_probs=57.4

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      ....++.+|=.||+.|.   ++..|++.|.+|+.++.+++-++.+++.....+   .++.++..|+.+.+          
T Consensus        34 ~~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~---~~v~~~~~d~~~~~----------   97 (246)
T d1y8ca_          34 NNLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQG---LKPRLACQDISNLN----------   97 (246)
T ss_dssp             TTCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTT---CCCEEECCCGGGCC----------
T ss_pred             hCCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccC---ccceeeccchhhhc----------
Confidence            35667889999999996   778889999999999999888888777665543   46778888887642          


Q ss_pred             HHhCCccEEEeCCC
Q psy9256         122 QQFGCLDILINNAG  135 (265)
Q Consensus       122 ~~~g~ldilinnAg  135 (265)
                       ..++.|+++...+
T Consensus        98 -~~~~fD~i~~~~~  110 (246)
T d1y8ca_          98 -INRKFDLITCCLD  110 (246)
T ss_dssp             -CSCCEEEEEECTT
T ss_pred             -ccccccccceeee
Confidence             1246787775433

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.93  E-value=0.42  Score=39.26  Aligned_cols=87  Identities=20%  Similarity=0.277  Sum_probs=57.8

Q ss_pred             HHHHHhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh
Q psy9256          32 FFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT  110 (265)
Q Consensus        32 ~~~~~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~  110 (265)
                      .|...+......++||+||-.|++.|+   ++..+++.|+ +|+.++.++.. ..+.+...+. ....++.++..|+.+.
T Consensus        22 ~y~~ai~~~~~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~-~~~~~i~~~~~~~~~l   96 (311)
T d2fyta1          22 SYRDFIYQNPHIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLN-KLEDTITLIKGKIEEV   96 (311)
T ss_dssp             HHHHHHHHCGGGTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHT-TCTTTEEEEESCTTTS
T ss_pred             HHHHHHHhccccCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHh-CCCccceEEEeeHHHh
Confidence            445555555566789999999999986   5666777887 68888877643 3333333332 3356788888888775


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeC
Q psy9256         111 KYHRRCFDAVIQQFGCLDILINN  133 (265)
Q Consensus       111 ~~~~~~~~~~~~~~g~ldilinn  133 (265)
                      ..          ...+.|++|.+
T Consensus        97 ~~----------~~~~~D~Ivse  109 (311)
T d2fyta1          97 HL----------PVEKVDVIISE  109 (311)
T ss_dssp             CC----------SCSCEEEEEEC
T ss_pred             cC----------ccccceEEEEe
Confidence            31          12468888865

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.86  E-value=1  Score=37.28  Aligned_cols=82  Identities=17%  Similarity=0.114  Sum_probs=53.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHh
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQF  124 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  124 (265)
                      +|+.||=..+.+| |  ++..+++.|++|+.++.++..++.+++.....+-...++.++..|+.+      .++...++-
T Consensus       132 ~~~rVLdlf~~tG-~--~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~------~l~~~~~~~  202 (309)
T d2igta1         132 RPLKVLNLFGYTG-V--ASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK------FIQREERRG  202 (309)
T ss_dssp             SCCEEEEETCTTC-H--HHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH------HHHHHHHHT
T ss_pred             CCCeEEEecCCCc-H--HHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH------hHHHHhhcC
Confidence            4778886666665 2  333456789999999999988888888766554444567777777543      223333444


Q ss_pred             CCccEEEeCCC
Q psy9256         125 GCLDILINNAG  135 (265)
Q Consensus       125 g~ldilinnAg  135 (265)
                      .+.|++|.+-.
T Consensus       203 ~~fD~IilDPP  213 (309)
T d2igta1         203 STYDIILTDPP  213 (309)
T ss_dssp             CCBSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            56676666544

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.79  E-value=0.067  Score=43.00  Aligned_cols=39  Identities=23%  Similarity=0.149  Sum_probs=33.9

Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCC
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRP  160 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~  160 (265)
                      +.++++|+||||||+.....+.+.+.++++..+..|...
T Consensus        70 ~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~  108 (245)
T d2ag5a1          70 NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRS  108 (245)
T ss_dssp             HHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHH
T ss_pred             cccccceeEEecccccCCCChhhCCHHHHHHHHHHhhcc
Confidence            345889999999999999999999999999988877754

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=91.58  E-value=0.43  Score=37.91  Aligned_cols=84  Identities=15%  Similarity=0.099  Sum_probs=58.1

Q ss_pred             cEEEEcCCC---CchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          47 KVVWITGAS---SGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        47 k~vlItGas---~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      ++++++|=+   ..--.++.+++...|.+|.....+....+...+......                            +
T Consensus        35 ~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~----------------------------~   86 (259)
T d2fr1a1          35 PHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG----------------------------D   86 (259)
T ss_dssp             SEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC----------------------------T
T ss_pred             CEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccc----------------------------c
Confidence            456666532   234456777777889998877767666666555443221                            2


Q ss_pred             hCCccEEEeCCCCCcccccchhhhHHHHHhhhccc
Q psy9256         124 FGCLDILINNAGRSQRAAWEDIELEVDRELFTYAY  158 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~  158 (265)
                      .+++|.+|||||+.....+.+.+.+.++..+..+.
T Consensus        87 ~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~  121 (259)
T d2fr1a1          87 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKV  121 (259)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHH
T ss_pred             cccccccccccccccccccccccHHHHHHHhhhhc
Confidence            46789999999999999988888888777665443

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.57  E-value=0.27  Score=38.66  Aligned_cols=78  Identities=17%  Similarity=0.075  Sum_probs=57.2

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ++...-+++.+|=.||++|   .++..|++.|++|+.++.++.-++.+++...+.+   .++.++..|+.+.+.      
T Consensus        35 ~~~~~~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~---~~i~~~~~d~~~l~~------  102 (251)
T d1wzna1          35 KEDAKREVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERN---LKIEFLQGDVLEIAF------  102 (251)
T ss_dssp             HHTCSSCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEESCGGGCCC------
T ss_pred             HHhcCCCCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccc---ccchheehhhhhccc------
Confidence            3444556788999999988   4567788999999999999888887777766543   468888888876431      


Q ss_pred             HHHHHhCCccEEEeC
Q psy9256         119 AVIQQFGCLDILINN  133 (265)
Q Consensus       119 ~~~~~~g~ldilinn  133 (265)
                           -+..|+++..
T Consensus       103 -----~~~fD~I~~~  112 (251)
T d1wzna1         103 -----KNEFDAVTMF  112 (251)
T ss_dssp             -----CSCEEEEEEC
T ss_pred             -----ccccchHhhh
Confidence                 1457776654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.35  E-value=0.12  Score=36.30  Aligned_cols=40  Identities=20%  Similarity=0.307  Sum_probs=33.8

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      +...++|.++|.|| +-+|.++|..|++.|.+|.++.|++.
T Consensus        17 l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          17 LDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             HhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            34556888988887 78999999999999999999988654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=91.35  E-value=0.055  Score=43.44  Aligned_cols=37  Identities=24%  Similarity=0.202  Sum_probs=28.9

Q ss_pred             CccEEEeCCCCCcc-cccchhhhHHHHHhhhcccCCce
Q psy9256         126 CLDILINNAGRSQR-AAWEDIELEVDRELFTYAYRPSI  162 (265)
Q Consensus       126 ~ldilinnAg~~~~-~~~~~~~~~~~~~~~~~~~~~~v  162 (265)
                      ++|+||||||+... ....+.+.++++..++.|....+
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~  118 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVV  118 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHH
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHH
Confidence            59999999998654 56677888888888888876443

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.34  E-value=0.13  Score=40.13  Aligned_cols=73  Identities=22%  Similarity=0.175  Sum_probs=52.8

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDA  119 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  119 (265)
                      ..++.||+|+=-|+++|+   ++..++..|+ +|+.++.+++.++.+.+.       ..++.++.+|+.+.         
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N-------~~~~~~~~~D~~~l---------  104 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN-------CGGVNFMVADVSEI---------  104 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH-------CTTSEEEECCGGGC---------
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc-------cccccEEEEehhhc---------
Confidence            468899999999999983   3334556675 599999887766655443       24567888887643         


Q ss_pred             HHHHhCCccEEEeCCCC
Q psy9256         120 VIQQFGCLDILINNAGR  136 (265)
Q Consensus       120 ~~~~~g~ldilinnAg~  136 (265)
                          -++.|++|-|-..
T Consensus       105 ----~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 ----SGKYDTWIMNPPF  117 (197)
T ss_dssp             ----CCCEEEEEECCCC
T ss_pred             ----CCcceEEEeCccc
Confidence                2689999988664

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=91.25  E-value=0.27  Score=38.11  Aligned_cols=39  Identities=21%  Similarity=0.294  Sum_probs=34.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      .++.||++.|.|- |.||+.+|+.+..-|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            4689999999998 88999999999999999998887644

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.52  E-value=0.39  Score=37.10  Aligned_cols=80  Identities=20%  Similarity=0.174  Sum_probs=57.6

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHH
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFD  118 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~  118 (265)
                      ...+++|++++=-|+++|.   ++..++..|+ +|+.++.+++.++.+.+.+...   +.+..++..|+.+.        
T Consensus        41 ~~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~---~~~~~~~~~d~~~~--------  106 (201)
T d1wy7a1          41 SLGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF---KGKFKVFIGDVSEF--------  106 (201)
T ss_dssp             HTTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG---TTSEEEEESCGGGC--------
T ss_pred             hcCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc---CCCceEEECchhhh--------
Confidence            4567899999988998882   2333456675 7999999988887777665443   35677788886543        


Q ss_pred             HHHHHhCCccEEEeCCCCCc
Q psy9256         119 AVIQQFGCLDILINNAGRSQ  138 (265)
Q Consensus       119 ~~~~~~g~ldilinnAg~~~  138 (265)
                           .++.|++|-|-....
T Consensus       107 -----~~~fD~Vi~nPP~~~  121 (201)
T d1wy7a1         107 -----NSRVDIVIMNPPFGS  121 (201)
T ss_dssp             -----CCCCSEEEECCCCSS
T ss_pred             -----CCcCcEEEEcCcccc
Confidence                 368999999987643

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.34  E-value=1.2  Score=32.32  Aligned_cols=36  Identities=14%  Similarity=0.066  Sum_probs=27.6

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCC--eEEEEecCCCcHHH
Q psy9256          49 VWITGASSGIGEALALQLSKCGA--KLVLSARSSSNLER   85 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~   85 (265)
                      +.|.|+ +.+|.++|..++.+|.  .+++.+++++..+.
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g   40 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVG   40 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhH
Confidence            445586 8899999999998873  59999987665543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.18  E-value=1.2  Score=36.41  Aligned_cols=87  Identities=22%  Similarity=0.290  Sum_probs=56.3

Q ss_pred             HHHHHhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh
Q psy9256          32 FFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT  110 (265)
Q Consensus        32 ~~~~~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~  110 (265)
                      .|...+...+...+||+||-.|++.|+   ++..+++.|+ +|+.++.++ ....+.+... ......++.++..|+.+.
T Consensus        20 ~y~~ai~~~~~~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~-~n~~~~~v~~~~~~~~~~   94 (316)
T d1oria_          20 TYRNSMFHNRHLFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVK-ANKLDHVVTIIKGKVEEV   94 (316)
T ss_dssp             HHHHHHHTCHHHHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHH-HTTCTTTEEEEESCTTTC
T ss_pred             HHHHHHHhccccCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHH-HhCCccccceEeccHHHc
Confidence            444444444455689999999999985   4566777886 588888765 3444444333 333456788888888775


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeC
Q psy9256         111 KYHRRCFDAVIQQFGCLDILINN  133 (265)
Q Consensus       111 ~~~~~~~~~~~~~~g~ldilinn  133 (265)
                      +.          ..++.|+++.+
T Consensus        95 ~~----------~~~~~D~ivs~  107 (316)
T d1oria_          95 EL----------PVEKVDIIISE  107 (316)
T ss_dssp             CC----------SSSCEEEEEEC
T ss_pred             cc----------ccceeEEEeee
Confidence            31          12467877765

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.87  E-value=0.23  Score=35.19  Aligned_cols=37  Identities=22%  Similarity=0.251  Sum_probs=31.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      ++|.++|.|| +-+|.++|..|.+.|.+|.++.+++.-
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            3577888777 889999999999999999999987653

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.87  E-value=0.54  Score=36.13  Aligned_cols=83  Identities=12%  Similarity=0.186  Sum_probs=62.0

Q ss_pred             CCcEEE-EcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVW-ITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vl-ItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +|.+++ +|-|+||.-.++.+++ . +++|+..+++++.++.+.+.+..+.   .++.++..+.++.+.+       ...
T Consensus        23 ~~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~---~r~~~~~~~f~~~~~~-------~~~   90 (192)
T d1m6ya2          23 DEKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLFKVSYREADFL-------LKT   90 (192)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGT---TTEEEEECCGGGHHHH-------HHH
T ss_pred             CCCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcccc---ccccchhHHHhhHHHH-------HHH
Confidence            344444 7788888888888876 3 4689999999999888887776654   6788999988875432       233


Q ss_pred             --hCCccEEEeCCCCCcc
Q psy9256         124 --FGCLDILINNAGRSQR  139 (265)
Q Consensus       124 --~g~ldilinnAg~~~~  139 (265)
                        .+.+|-++...|+++.
T Consensus        91 ~~~~~vdgIl~DlGvSs~  108 (192)
T d1m6ya2          91 LGIEKVDGILMDLGVSTY  108 (192)
T ss_dssp             TTCSCEEEEEEECSCCHH
T ss_pred             cCCCCcceeeeccchhHh
Confidence              3689989999999764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=89.74  E-value=0.62  Score=36.82  Aligned_cols=118  Identities=22%  Similarity=0.147  Sum_probs=64.8

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .+.++.|+|.|+ +|+|-.++..|++.|. ++.++|.+.=+...+.++          ..+-.-|+..++ .+.+.+.++
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ----------~l~~~~diG~~K-~~~a~~~l~   94 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQ----------TLHSDATVGQPK-VESARDALT   94 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTC----------TTCCGGGTTSBH-HHHHHHHHH
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhh----------ccccHhhcCchH-HHHHHHHHH
Confidence            477889999996 8999999999999997 588888653333322221          111122444433 333444455


Q ss_pred             HHhCCccEEEeCCCCCcccccchhhhHHHHHhhhcccCCceeeeeccccChhHHHHHHHHHHhhcc
Q psy9256         122 QQFGCLDILINNAGRSQRAAWEDIELEVDRELFTYAYRPSIYTLTLDVTQTKYHRRCFDAVIQQFG  187 (265)
Q Consensus       122 ~~~g~ldilinnAg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dv~~~~~v~~~~~~i~~~~g  187 (265)
                      +..+...+-..+.-+.         .+......      ....+..|.+|..+.+..+.+.....+
T Consensus        95 ~~np~~~i~~~~~~~~---------~~~~~~~~------~~~divid~~d~~~~~~~in~~~~~~~  145 (247)
T d1jw9b_          95 RINPHIAITPVNALLD---------DAELAALI------AEHDLVLDCTDNVAVRNQLNAGCFAAK  145 (247)
T ss_dssp             HHCTTSEEEEECSCCC---------HHHHHHHH------HTSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred             Hhhcccchhhhhhhhh---------hccccccc------cccceeeeccchhhhhhhHHHHHHHhC
Confidence            5555444433222111         11111110      112344566777777777777765544

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.64  E-value=0.46  Score=34.68  Aligned_cols=42  Identities=17%  Similarity=0.088  Sum_probs=31.9

Q ss_pred             cccCCcEEEEc-CCCCchhHHHHHHHHHcCCeEEEEecCCCcH
Q psy9256          42 NYFNNKVVWIT-GASSGIGEALALQLSKCGAKLVLSARSSSNL   83 (265)
Q Consensus        42 ~~l~gk~vlIt-Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~   83 (265)
                      ....++.++|. .+++=||.++|..|++.|++|.++.+.+.-+
T Consensus        35 ~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~   77 (156)
T d1djqa2          35 KKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLAN   77 (156)
T ss_dssp             CSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTT
T ss_pred             ccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCccc
Confidence            44445555554 4557799999999999999999999865433

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=89.43  E-value=2.2  Score=34.38  Aligned_cols=80  Identities=19%  Similarity=0.263  Sum_probs=55.4

Q ss_pred             cEEEEcCCCCc-hhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          47 KVVWITGASSG-IGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        47 k~vlItGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +.++-.|+++| |+.++++   ...++|+.++.+++.++-+.+.....+. ..+..+...|..+..         ....+
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~-~~~~~i~~~~~~~~~---------~~~~~  178 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGV-SDRFFVRKGEFLEPF---------KEKFA  178 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTC-TTSEEEEESSTTGGG---------GGGTT
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCC-CceeEEeeccccccc---------ccccC
Confidence            45565555555 5555543   3567999999999998888887766542 346777777876542         23458


Q ss_pred             CccEEEeCCCCCcc
Q psy9256         126 CLDILINNAGRSQR  139 (265)
Q Consensus       126 ~ldilinnAg~~~~  139 (265)
                      +.|++|.|=.....
T Consensus       179 ~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         179 SIEMILSNPPYVKS  192 (271)
T ss_dssp             TCCEEEECCCCBCG
T ss_pred             cccEEEEcccccCc
Confidence            99999999988754

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=89.33  E-value=4.7  Score=32.88  Aligned_cols=134  Identities=12%  Similarity=0.024  Sum_probs=84.1

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ..+|+.||=.+++.| |.++  +++..|.+|+.++.++..++.+++.....+-  .+..++..|+.+.      .+....
T Consensus       143 ~~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl--~~~~~i~~d~~~~------~~~~~~  211 (318)
T d1wxxa2         143 RFRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGL--GNVRVLEANAFDL------LRRLEK  211 (318)
T ss_dssp             GCCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTC--TTEEEEESCHHHH------HHHHHH
T ss_pred             HhCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCC--CCcceeeccHHHH------hhhhHh
Confidence            457999997777776 4444  3455678899999999999988887776542  3577777776543      222334


Q ss_pred             HhCCccEEEeCCCCCcccccchhh------hHHHHHhhhcccCCceeeeeccc-cChhHHHHHHHHHHhhcc
Q psy9256         123 QFGCLDILINNAGRSQRAAWEDIE------LEVDRELFTYAYRPSIYTLTLDV-TQTKYHRRCFDAVIQQFG  187 (265)
Q Consensus       123 ~~g~ldilinnAg~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~dv-~~~~~v~~~~~~i~~~~g  187 (265)
                      .-++.|++|.+.....+.+..-.+      .-...+.....+++.+....|.- -+++....++.+.....+
T Consensus       212 ~~~~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs~~~~~~~f~~~v~~a~~~a~  283 (318)
T d1wxxa2         212 EGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAH  283 (318)
T ss_dssp             TTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTT
T ss_pred             hhcCCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCcccCHHHHHHHHHHHHHHcC
Confidence            457899999988765554322111      11122233344556777777753 355666666666655544

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=89.20  E-value=3  Score=34.28  Aligned_cols=83  Identities=12%  Similarity=0.004  Sum_probs=56.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +|+.+|=..+..| |.  +...+..|+ .|+.++.++..++.+++....-+-...+..++..|+-+      ..+...+.
T Consensus       144 ~g~~VLdlf~~~G-~~--sl~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~------~l~~~~~~  214 (317)
T d2b78a2         144 AGKTVLNLFSYTA-AF--SVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD------YFKYARRH  214 (317)
T ss_dssp             BTCEEEEETCTTT-HH--HHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH------HHHHHHHT
T ss_pred             CCCceeecCCCCc-HH--HHHHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHH------HHHHHHhh
Confidence            5888886666555 22  233455677 59999999999998888776655445678888888642      22333444


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                      ..+.|++|.+...
T Consensus       215 ~~~fD~Ii~DPP~  227 (317)
T d2b78a2         215 HLTYDIIIIDPPS  227 (317)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             cCCCCEEEEcChh
Confidence            5689998888654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.05  E-value=0.72  Score=35.32  Aligned_cols=40  Identities=23%  Similarity=0.257  Sum_probs=34.9

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      .++.||++.|.|. +.||..+|+.+...|++|+..++....
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            4678999999988 889999999999999999998876543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=89.02  E-value=0.12  Score=39.83  Aligned_cols=38  Identities=24%  Similarity=0.300  Sum_probs=30.8

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHH
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVK   87 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   87 (265)
                      +.|.|| |-.|.++|..|++.|.+|.+.+|+++..+...
T Consensus        10 I~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2          10 AVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            566677 56999999999999999999999876555443

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=89.00  E-value=0.23  Score=37.48  Aligned_cols=26  Identities=12%  Similarity=-0.047  Sum_probs=17.3

Q ss_pred             HHHHHHHHHhhhhcCCceEEEEcccc
Q psy9256         225 SLSRIATSYFLAREQGGHLVVTSSIA  250 (265)
Q Consensus       225 ~l~~~~~p~l~~~~~~g~IV~isS~a  250 (265)
                      ..++.+.+.+.+..+.+-++++|--.
T Consensus       124 ~ii~~i~~~i~~~~P~A~li~~TNPv  149 (167)
T d1u8xx1         124 GGVLEILDYMEKYSPDAWMLNYSNPA  149 (167)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred             HHHHHHHHHHHhhCCCeEEEEeCCHH
Confidence            45566777777766667787777543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.92  E-value=0.2  Score=35.07  Aligned_cols=41  Identities=20%  Similarity=0.257  Sum_probs=32.1

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      .+.+++ |.++|.|| +-+|.++|..|++.|.+|.++.|.+.-
T Consensus        17 ~~~~~p-~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          17 NLGEVP-KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             TCSSCC-SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             ChhhcC-CeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence            334454 55667677 789999999999999999999886643

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.59  E-value=0.3  Score=38.52  Aligned_cols=36  Identities=11%  Similarity=-0.032  Sum_probs=25.7

Q ss_pred             hCCccEEEeCCCCCccc-ccchhhhHHHHHhhhcccC
Q psy9256         124 FGCLDILINNAGRSQRA-AWEDIELEVDRELFTYAYR  159 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~-~~~~~~~~~~~~~~~~~~~  159 (265)
                      .+++|+||||||..... ...+.+.+.++..+..|..
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~  105 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIW  105 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHH
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcch
Confidence            36899999999975554 4445666777777766654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.47  E-value=0.2  Score=36.91  Aligned_cols=35  Identities=14%  Similarity=0.224  Sum_probs=29.2

Q ss_pred             CCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          54 ASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        54 as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      |.|-+|.++++.|.+.|.++++.+|+.++.+++.+
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~   41 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAE   41 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcc
Confidence            44889999999999999999999998776665544

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=88.46  E-value=2.5  Score=33.05  Aligned_cols=49  Identities=14%  Similarity=0.011  Sum_probs=38.9

Q ss_pred             CCceeeeeccccChhHHHHHHHHHHhhcccccEEEeccccccccccccc
Q psy9256         159 RPSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDI  207 (265)
Q Consensus       159 ~~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~  207 (265)
                      ..+...+.||+++++++..+++.+.+.++..+.+-.........+....
T Consensus        54 ~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~  102 (268)
T d2h7ma1          54 PAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGM  102 (268)
T ss_dssp             SSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGS
T ss_pred             CCceeeEeeecccccccccccchhhhccccCCCcceeeecccccCcccc
Confidence            3567788999999999999999999999999998766555555544333

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=88.32  E-value=0.22  Score=36.54  Aligned_cols=40  Identities=25%  Similarity=0.416  Sum_probs=31.8

Q ss_pred             EEEcCCCCchhHHHHHHHHHcC-CeEEEEecCCCcHHHHHHH
Q psy9256          49 VWITGASSGIGEALALQLSKCG-AKLVLSARSSSNLERVKNL   89 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~   89 (265)
                      +.+.|+ |-+|.++++.|.+.| .+|++.+|++++.+++.++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            345566 889999999998887 8899999998777666553

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=88.23  E-value=0.7  Score=37.09  Aligned_cols=75  Identities=21%  Similarity=0.201  Sum_probs=52.7

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      ..+|+.++=.|+++|+ .  +..+++.|++|+.++.++..++.+++.....+   .+..++..|+.+           .-
T Consensus       118 ~~~g~~VLDiGcGsG~-l--~i~aa~~g~~V~gvDis~~av~~A~~na~~n~---~~~~~~~~d~~~-----------~~  180 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV-L--AIAAEKLGGKALGVDIDPMVLPQAEANAKRNG---VRPRFLEGSLEA-----------AL  180 (254)
T ss_dssp             CCTTCEEEEETCTTSH-H--HHHHHHTTCEEEEEESCGGGHHHHHHHHHHTT---CCCEEEESCHHH-----------HG
T ss_pred             cCccCEEEEcccchhH-H--HHHHHhcCCEEEEEECChHHHHHHHHHHHHcC---CceeEEeccccc-----------cc
Confidence            3468999999999996 3  34566789999999999999998887766543   344555555321           11


Q ss_pred             HhCCccEEEeCC
Q psy9256         123 QFGCLDILINNA  134 (265)
Q Consensus       123 ~~g~ldilinnA  134 (265)
                      ..++.|+++.|-
T Consensus       181 ~~~~fD~V~ani  192 (254)
T d2nxca1         181 PFGPFDLLVANL  192 (254)
T ss_dssp             GGCCEEEEEEEC
T ss_pred             cccccchhhhcc
Confidence            246788888763

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.19  E-value=0.21  Score=35.58  Aligned_cols=38  Identities=29%  Similarity=0.206  Sum_probs=30.7

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      ..++ |.++|.|| +-||.++|..|++.|.+|.++.|++.
T Consensus        19 ~~~p-k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          19 EELP-GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSCC-SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             hhcC-CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            3344 56777787 46999999999999999999998653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.77  E-value=0.23  Score=35.07  Aligned_cols=34  Identities=29%  Similarity=0.314  Sum_probs=29.1

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      +|.++|.|| +-+|.++|..|++.|.+|.++.|++
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            356777776 8899999999999999999998765

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=87.71  E-value=0.26  Score=38.69  Aligned_cols=34  Identities=26%  Similarity=0.238  Sum_probs=28.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      +|.|+|.|| +--|++.|.+|++.|.+|.+..+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            467888887 5568999999999999999997653

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.68  E-value=0.24  Score=34.69  Aligned_cols=38  Identities=26%  Similarity=0.225  Sum_probs=30.1

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      .+++.| ++|.|| +-+|.++|..|.+.|.+|.++.|.+.
T Consensus        18 ~~~p~~-vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          18 PALPER-VAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SSCCSE-EEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             hhCCCE-EEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            445544 556566 78999999999999999999988654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=87.37  E-value=2.2  Score=33.66  Aligned_cols=70  Identities=13%  Similarity=0.128  Sum_probs=40.6

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -.|-.|+|++=+.-.-. .++++.++|.......-+....+...+.                       ++.+    .+.
T Consensus        29 ~~Ga~V~i~~r~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~~~~~-----------------------~~~~----~~~   80 (274)
T d2pd4a1          29 NQGATLAFTYLNESLEK-RVRPIAQELNSPYVYELDVSKEEHFKSL-----------------------YNSV----KKD   80 (274)
T ss_dssp             TTTCEEEEEESSTTTHH-HHHHHHHHTTCCCEEECCTTCHHHHHHH-----------------------HHHH----HHH
T ss_pred             HCCCEEEEEeCCHHHHH-HHHHHHhhCCceeEeeecccchhhHHHH-----------------------HHHH----HHH
Confidence            35778888886654433 4566666654433322222222222222                       2222    356


Q ss_pred             hCCccEEEeCCCCCcccc
Q psy9256         124 FGCLDILINNAGRSQRAA  141 (265)
Q Consensus       124 ~g~ldilinnAg~~~~~~  141 (265)
                      +|++|++|||||+.....
T Consensus        81 ~g~id~lV~nag~~~~~~   98 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEA   98 (274)
T ss_dssp             TSCEEEEEECCCCCCGGG
T ss_pred             cCCCCeEEeecccccccc
Confidence            899999999999865543

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.22  E-value=0.3  Score=39.16  Aligned_cols=37  Identities=19%  Similarity=0.365  Sum_probs=31.1

Q ss_pred             CCcEEEEcCCCCchhHHH-----HHHHHHcCCeEEEEecCCC
Q psy9256          45 NNKVVWITGASSGIGEAL-----ALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        45 ~gk~vlItGas~GIG~ai-----a~~l~~~G~~V~~~~r~~~   81 (265)
                      .|+.++|+.|.||.|+..     |..|++.|.+|.+++.+++
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            466677777799999985     8899999999999998864

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.20  E-value=0.31  Score=34.28  Aligned_cols=40  Identities=18%  Similarity=0.205  Sum_probs=31.6

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      .+..++ +.++|.|| +=||.++|..|++.|++|.++.|+..
T Consensus        17 ~l~~~p-~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          17 DFQNVP-GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SCSSCC-SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CcccCC-CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            334555 45667676 78999999999999999999987654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.15  E-value=1.9  Score=35.45  Aligned_cols=88  Identities=25%  Similarity=0.333  Sum_probs=55.8

Q ss_pred             HHHHHhhhhccccCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh
Q psy9256          32 FFIEKINKRLNYFNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT  110 (265)
Q Consensus        32 ~~~~~~~~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~  110 (265)
                      .|...+...+...+|++||-.|++.|+   ++..+++.|+ .|+.++.++ .++.+.+.... .+...++.++..|+.+.
T Consensus        25 ~y~~aI~~~~~~~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~-~~~~~~i~~i~~~~~~l   99 (328)
T d1g6q1_          25 SYRNAIIQNKDLFKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVEL-NGFSDKITLLRGKLEDV   99 (328)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHH-TTCTTTEEEEESCTTTS
T ss_pred             HHHHHHHhccccCCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHH-hCccccceEEEeehhhc
Confidence            334444444455689999999999984   4556677887 588877664 44444443333 33456788888888765


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCC
Q psy9256         111 KYHRRCFDAVIQQFGCLDILINNA  134 (265)
Q Consensus       111 ~~~~~~~~~~~~~~g~ldilinnA  134 (265)
                      +-          .-++.|+++.+-
T Consensus       100 ~~----------~~~~~D~i~se~  113 (328)
T d1g6q1_         100 HL----------PFPKVDIIISEW  113 (328)
T ss_dssp             CC----------SSSCEEEEEECC
T ss_pred             cC----------cccceeEEEEEe
Confidence            31          114678777654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=87.02  E-value=0.25  Score=34.81  Aligned_cols=34  Identities=24%  Similarity=0.251  Sum_probs=29.0

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      |.++|.|| +-+|.++|..|++.|.+|.++.|...
T Consensus        23 ~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          23 KKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            56777777 78999999999999999999988653

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.99  E-value=1.7  Score=32.67  Aligned_cols=82  Identities=10%  Similarity=0.038  Sum_probs=60.1

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +....+++++=.|+++|   .++..+++.+.+|+.++.++...+.+.+.+...+-...++.++..|..+.-.        
T Consensus        48 l~~~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~--------  116 (194)
T d1dusa_          48 VVVDKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--------  116 (194)
T ss_dssp             CCCCTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--------
T ss_pred             CCcCCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhhc--------
Confidence            44556889998899888   4455677788899999999888888877776655445678888888765210        


Q ss_pred             HHHhCCccEEEeCCCC
Q psy9256         121 IQQFGCLDILINNAGR  136 (265)
Q Consensus       121 ~~~~g~ldilinnAg~  136 (265)
                         -+..|+++.|..+
T Consensus       117 ---~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 ---DRKYNKIITNPPI  129 (194)
T ss_dssp             ---TSCEEEEEECCCS
T ss_pred             ---cCCceEEEEcccE
Confidence               1468888887654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.99  E-value=1  Score=32.15  Aligned_cols=72  Identities=15%  Similarity=0.240  Sum_probs=51.0

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEE-ecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhCCc
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLS-ARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFGCL  127 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~l  127 (265)
                      +.|.|+++-+|+++++.+.+.|+.++.. +++...  ..       .  ...   +-.|.|.|+......+...+..  .
T Consensus         3 i~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--~~-------~--~~D---VvIDFS~p~~~~~~l~~~~~~~--~   66 (128)
T d1vm6a3           3 YGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--EL-------D--SPD---VVIDFSSPEALPKTVDLCKKYR--A   66 (128)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--EC-------S--CCS---EEEECSCGGGHHHHHHHHHHHT--C
T ss_pred             EEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--Hh-------c--cCC---EEEEecCHHHHHHHHHHHHhcC--C
Confidence            7899999999999999998999987654 332211  00       0  112   5679999999988888776553  3


Q ss_pred             cEEEeCCCC
Q psy9256         128 DILINNAGR  136 (265)
Q Consensus       128 dilinnAg~  136 (265)
                      .+++-..|.
T Consensus        67 p~ViGTTG~   75 (128)
T d1vm6a3          67 GLVLGTTAL   75 (128)
T ss_dssp             EEEECCCSC
T ss_pred             CEEEEcCCC
Confidence            467777763

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=86.89  E-value=0.4  Score=35.00  Aligned_cols=38  Identities=26%  Similarity=0.312  Sum_probs=29.8

Q ss_pred             EEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHH
Q psy9256          48 VVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVK   87 (265)
Q Consensus        48 ~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   87 (265)
                      ..+| | .+-+|.++|+.|.++|++|+..+++++......
T Consensus         3 IgiI-G-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           3 VGFI-G-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEE-S-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred             EEEE-c-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence            3444 4 488999999999999999988888776655443

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=86.65  E-value=3.1  Score=30.93  Aligned_cols=79  Identities=14%  Similarity=0.173  Sum_probs=55.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHH
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVI  121 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  121 (265)
                      .--+|.+++=.|+++|   .++..+++.+.+|+.++.+++.++.+++.++..+- ..++.++..|..+.          .
T Consensus        30 ~~~~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl-~~~v~~~~gda~~~----------~   95 (186)
T d1l3ia_          30 EPGKNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGL-GDNVTLMEGDAPEA----------L   95 (186)
T ss_dssp             CCCTTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC-CTTEEEEESCHHHH----------H
T ss_pred             CCCCCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCC-CcceEEEECchhhc----------c
Confidence            3346888888898888   34455667788999999999999988888776542 35788888874221          2


Q ss_pred             HHhCCccEEEeCC
Q psy9256         122 QQFGCLDILINNA  134 (265)
Q Consensus       122 ~~~g~ldilinnA  134 (265)
                      ...+..|.++.+-
T Consensus        96 ~~~~~~D~v~~~~  108 (186)
T d1l3ia_          96 CKIPDIDIAVVGG  108 (186)
T ss_dssp             TTSCCEEEEEESC
T ss_pred             cccCCcCEEEEeC
Confidence            2345677666554

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.63  E-value=0.26  Score=34.87  Aligned_cols=39  Identities=23%  Similarity=0.259  Sum_probs=30.9

Q ss_pred             ccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          41 LNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        41 ~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      +..++ |.++|.|| +-||.++|..|++.|++|.++.|++.
T Consensus        19 l~~~p-~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          19 LKEIP-KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSSCC-SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cccCC-CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            34555 45666676 67999999999999999999988653

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.62  E-value=0.26  Score=42.90  Aligned_cols=80  Identities=13%  Similarity=0.181  Sum_probs=50.2

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQ  122 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  122 (265)
                      +.+..|+|.|+ +|+|-.+++.|+..|. ++.+++.+.=....+.++          ..+-.-|+...+ .+.+.+.+++
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQ----------flf~~~diG~~K-a~~a~~~l~~  102 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ----------FLFRPKDIGRPK-AEVAAEFLND  102 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTC----------TTCCGGGTTSBH-HHHHHHHHHH
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhccc----------ccCChhHcCcHH-HHHHHHHHHh
Confidence            34556899898 8899999999999998 699998764333332221          112233555544 3444456666


Q ss_pred             HhCCccEEEeCCC
Q psy9256         123 QFGCLDILINNAG  135 (265)
Q Consensus       123 ~~g~ldilinnAg  135 (265)
                      ..+...+...+.-
T Consensus       103 ~np~v~i~~~~~~  115 (426)
T d1yovb1         103 RVPNCNVVPHFNK  115 (426)
T ss_dssp             HSTTCCCEEECSC
T ss_pred             hCCCCceEeeecc
Confidence            6666666555443

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.53  E-value=2.8  Score=34.43  Aligned_cols=82  Identities=13%  Similarity=0.135  Sum_probs=51.2

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      +|+++|=.+++.|.   ++..++..|+ +|+.++.+++.++.+.+.+...+- ..++.++..|+.+.      .......
T Consensus       145 ~g~~VLDl~~g~G~---~si~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl-~~~~~~~~~d~~~~------~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGG---FAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGV-EDRMKFIVGSAFEE------MEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-GGGEEEEESCHHHH------HHHHHHT
T ss_pred             CCCeeecccCcccc---hhhhhhhcCCcEEEeecCCHHHHHHHHHHHHHcCC-Cccceeeechhhhh------hHHHHhc
Confidence            48889988876653   2233445666 699999999988888887665442 23566666665421      1222333


Q ss_pred             hCCccEEEeCCCC
Q psy9256         124 FGCLDILINNAGR  136 (265)
Q Consensus       124 ~g~ldilinnAg~  136 (265)
                      .++.|++|.+...
T Consensus       215 ~~~fD~Vi~DpP~  227 (324)
T d2as0a2         215 GEKFDIVVLDPPA  227 (324)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             cCCCCchhcCCcc
Confidence            4567777766653

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=86.48  E-value=1.6  Score=31.67  Aligned_cols=35  Identities=20%  Similarity=0.220  Sum_probs=25.9

Q ss_pred             cCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHH
Q psy9256          52 TGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKN   88 (265)
Q Consensus        52 tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   88 (265)
                      .|- +-+|..+|++|.+.|..+ ...|+.++.++..+
T Consensus         6 IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~   40 (156)
T d2cvza2           6 IGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQE   40 (156)
T ss_dssp             ECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHH
T ss_pred             EeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHH
Confidence            355 789999999999988765 56777666555444

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.40  E-value=0.51  Score=33.30  Aligned_cols=38  Identities=29%  Similarity=0.308  Sum_probs=29.9

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecC
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARS   79 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~   79 (265)
                      .+.+++.+ ++|.|| +=||.++|..|.+.|.+|.++.|+
T Consensus        15 ~l~~~P~~-vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          15 SLPYCPGK-TLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             TCSSCCCS-EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CcccCCCe-EEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            44555545 555566 789999999999999999999875

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=86.34  E-value=0.35  Score=36.32  Aligned_cols=38  Identities=21%  Similarity=0.369  Sum_probs=33.9

Q ss_pred             ccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          43 YFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        43 ~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      -+.||+++|.|= +-+|+.+|+++...|++|+++..+|-
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch
Confidence            368999999987 67999999999999999999988763

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.23  E-value=0.3  Score=33.99  Aligned_cols=40  Identities=18%  Similarity=0.250  Sum_probs=31.3

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      .+..++ |.++|.|| +-+|.++|..|++.|++|.++.|.+.
T Consensus        16 ~~~~~p-~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          16 APKALP-QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CCSSCC-SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CcccCC-CeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            345555 55666665 78999999999999999999987653

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.20  E-value=0.42  Score=36.91  Aligned_cols=35  Identities=20%  Similarity=0.409  Sum_probs=30.4

Q ss_pred             CCcEEEEcCCCCchhHH-----HHHHHHHcCCeEEEEecC
Q psy9256          45 NNKVVWITGASSGIGEA-----LALQLSKCGAKLVLSARS   79 (265)
Q Consensus        45 ~gk~vlItGas~GIG~a-----ia~~l~~~G~~V~~~~r~   79 (265)
                      +||++.|+|+.+|.|+.     +|..|++.|.+|.+++-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            47999999999999986     677888999999999854

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=86.07  E-value=0.44  Score=36.85  Aligned_cols=33  Identities=33%  Similarity=0.359  Sum_probs=27.8

Q ss_pred             cEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          47 KVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        47 k~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      |.|+|.|| +=.|++.|..|+++|++|.++.|+.
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34677777 6789999999999999999999853

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.92  E-value=1.1  Score=34.90  Aligned_cols=80  Identities=19%  Similarity=0.171  Sum_probs=61.0

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQ  123 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  123 (265)
                      -+|..||-.|+++|--.++.-++.  |.+|+.+.++++-.+.+.+.+.+.+  -.++.++..|..+-          ...
T Consensus        77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g--~~nv~~~~gd~~~g----------~~~  142 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG--VKNVHVILGDGSKG----------FPP  142 (215)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT--CCSEEEEESCGGGC----------CGG
T ss_pred             CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC--CceeEEEECccccC----------Ccc
Confidence            357889999999998888877776  4679999999888888888887766  36788888887642          123


Q ss_pred             hCCccEEEeCCCCC
Q psy9256         124 FGCLDILINNAGRS  137 (265)
Q Consensus       124 ~g~ldilinnAg~~  137 (265)
                      .++.|.++-++++.
T Consensus       143 ~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         143 KAPYDVIIVTAGAP  156 (215)
T ss_dssp             GCCEEEEEECSBBS
T ss_pred             cCcceeEEeecccc
Confidence            47889887777753

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.82  E-value=0.56  Score=36.54  Aligned_cols=44  Identities=9%  Similarity=-0.048  Sum_probs=36.1

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHH
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLC   90 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   90 (265)
                      ..|+.||.-||+.|   ..+..|++.|++|+.++-+++.++.+.+..
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            46789999999888   457888999999999999887777666543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.74  E-value=0.31  Score=34.46  Aligned_cols=39  Identities=18%  Similarity=0.213  Sum_probs=31.8

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      .+++ |.++|.|| +=||.++|..|.+.|++|.++.|++.-
T Consensus        22 ~~~p-~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          22 SEIP-KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             SSCC-SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             cccC-CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            3444 56777787 789999999999999999999887644

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.66  E-value=3.5  Score=31.95  Aligned_cols=59  Identities=20%  Similarity=0.195  Sum_probs=45.8

Q ss_pred             CceeeeeccccChhHHHHHHHHHHhhcccccEEEecccccccccccccch--HHHHhhhhh
Q psy9256         160 PSIYTLTLDVTQTKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIEL--EVDRELFEL  218 (265)
Q Consensus       160 ~~v~~~~~dv~~~~~v~~~~~~i~~~~g~ldilVnnAG~~~~~~~~~~~~--~~~~~~~~~  218 (265)
                      .......+|+.+..+++...+++....+..|.+++|++....++.....+  +...+.++-
T Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (248)
T d2o23a1          51 NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQR  111 (248)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHH
T ss_pred             CCcccccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHH
Confidence            46678899999999999999999999999999999999887666544332  233444543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.53  E-value=0.38  Score=35.97  Aligned_cols=35  Identities=14%  Similarity=0.160  Sum_probs=28.2

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCe-EEEEecCCC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAK-LVLSARSSS   81 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~-V~~~~r~~~   81 (265)
                      +|.|+|.|| +-.|++.|..|++.|++ |.+..|+..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            466777777 77899999999999985 888887643

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.48  E-value=1  Score=34.11  Aligned_cols=74  Identities=12%  Similarity=0.115  Sum_probs=52.9

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      +..+|=.||++|.   ++..+++.|++|+.++.+++-++.+++.....+   .....+..|..+...          ..+
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~---~~~~~~~~d~~~l~~----------~~~  101 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDARKLSF----------EDK  101 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCTTSCCS----------CTT
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccc---ccccccccccccccc----------cCc
Confidence            4568888999986   667888899999999999888888877666554   355667777776421          114


Q ss_pred             CccEEEeCCC
Q psy9256         126 CLDILINNAG  135 (265)
Q Consensus       126 ~ldilinnAg  135 (265)
                      ..|+++.+..
T Consensus       102 ~fD~I~~~~~  111 (226)
T d1ve3a1         102 TFDYVIFIDS  111 (226)
T ss_dssp             CEEEEEEESC
T ss_pred             CceEEEEecc
Confidence            5777766543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.48  E-value=1.4  Score=33.15  Aligned_cols=62  Identities=13%  Similarity=0.180  Sum_probs=46.5

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCCh
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQT  110 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~  110 (265)
                      +.++.+|=.||+.|.   .+..|+++|++|+.++.+++.++.+++.....+-  ..+.+...|+.+.
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~~~~~d~~~~   90 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGL--DNLQTDLVDLNTL   90 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--TTEEEEECCTTTC
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccc--cchhhhheecccc
Confidence            455678888997664   5578889999999999999888888777665542  3566777777654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.93  E-value=0.32  Score=33.52  Aligned_cols=42  Identities=12%  Similarity=0.225  Sum_probs=33.8

Q ss_pred             hhccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          39 KRLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        39 ~~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      +...++.||.|+|.|++ --|..+|..|+..+.++++..|+.+
T Consensus        25 ~~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          25 REPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             CCGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             cchhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            34457899999999985 6688999999998888877777653

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=84.83  E-value=3.3  Score=31.29  Aligned_cols=92  Identities=20%  Similarity=0.181  Sum_probs=57.8

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCC---------------C
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVT---------------Q  109 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~---------------~  109 (265)
                      +.-.++|.|| +-.|+.-++....-|+.|.+.+.++++++++.+...       +  ++..+..               +
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~-------~--~i~~~~~~~~~~~~~~gyA~~~s   97 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG-------K--FITVDDEAMKTAETAGGYAKEMG   97 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC-------E--ECCC-------------------
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc-------c--eEEEeccccccccccccchhhcC
Confidence            3446777777 557888888888999999999999988877665321       1  1111111               1


Q ss_pred             hHHHHHHHHHHHHHhCCccEEEeCCCCCcccccchhh
Q psy9256         110 TKYHRRCFDAVIQQFGCLDILINNAGRSQRAAWEDIE  146 (265)
Q Consensus       110 ~~~~~~~~~~~~~~~g~ldilinnAg~~~~~~~~~~~  146 (265)
                      .+...+..+.+.+...+-|++|..|=+-.+..+.-.+
T Consensus        98 ~~~~~~~~~~l~~~l~~aDlVI~talipG~~aP~lit  134 (183)
T d1l7da1          98 EEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLIT  134 (183)
T ss_dssp             ----CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSC
T ss_pred             HHHHHHHHHHHHHHHHhhhhheeeeecCCcccceeeh
Confidence            1222334455667778999999999885555444333

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=84.64  E-value=0.6  Score=37.83  Aligned_cols=31  Identities=19%  Similarity=0.286  Sum_probs=22.4

Q ss_pred             EEEEcCCCCchhH-----HHHHHHHHcCCeEEEEecC
Q psy9256          48 VVWITGASSGIGE-----ALALQLSKCGAKLVLSARS   79 (265)
Q Consensus        48 ~vlItGas~GIG~-----aia~~l~~~G~~V~~~~r~   79 (265)
                      .++|++|++| |.     +++++|.++|++|.+++..
T Consensus         2 kili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           2 RLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             EEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             EEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            3455555555 65     6899999999999887644

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=84.25  E-value=0.4  Score=37.96  Aligned_cols=31  Identities=26%  Similarity=0.297  Sum_probs=27.2

Q ss_pred             EEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          49 VWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        49 vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      |+|.|| +-.|.++|.+|+++|.+|+++++++
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677776 7789999999999999999999864

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=84.00  E-value=0.64  Score=35.28  Aligned_cols=38  Identities=24%  Similarity=0.274  Sum_probs=32.3

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      ..+|.++|.|| +--|++.|..++++|++|.+..+.+.-
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence            45788888888 678999999999999999999887544

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=83.53  E-value=0.8  Score=36.39  Aligned_cols=36  Identities=31%  Similarity=0.288  Sum_probs=29.1

Q ss_pred             cCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCC
Q psy9256          44 FNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        44 l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~   80 (265)
                      -..|.|+|.||+ --|++.|..|++.|.+|.+..+++
T Consensus        28 ~~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            345678888884 559999999999999999997643

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.32  E-value=0.77  Score=32.78  Aligned_cols=37  Identities=16%  Similarity=0.188  Sum_probs=31.1

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCc
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSN   82 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~   82 (265)
                      .+|.++|.|| +-+|.++|..|.+.|.+|.++.+.+.-
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence            3577788777 789999999999999999999886543

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.30  E-value=3.3  Score=31.65  Aligned_cols=63  Identities=19%  Similarity=0.232  Sum_probs=45.6

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHH
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKY  112 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~  112 (265)
                      +|.+|+=.||++|.-......+...| .|+.++.+++.++.+.+..+..    +++.++..|..+++.
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~----~ni~~i~~d~~~~~~  118 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER----NNIIPLLFDASKPWK  118 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC----SSEEEECSCTTCGGG
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc----CCceEEEeeccCccc
Confidence            58899999999996444333333444 8999999998888887766554    367778888877653

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=83.02  E-value=1.7  Score=33.16  Aligned_cols=76  Identities=16%  Similarity=0.091  Sum_probs=53.0

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHHHHHhC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAVIQQFG  125 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  125 (265)
                      ++.+|=.||+.|.-   +..+++.|++|+.++.+++-++.+++.....+  ..++.++..|..+.+-          ..+
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~--~~~i~~~~~d~~~l~~----------~~~   80 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG--HQQVEYVQGDAEQMPF----------TDE   80 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT--CCSEEEEECCC-CCCS----------CTT
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccc--cccccccccccccccc----------ccc
Confidence            57889889988843   46778889999999998888877776666544  2567788888776420          124


Q ss_pred             CccEEEeCCCC
Q psy9256         126 CLDILINNAGR  136 (265)
Q Consensus       126 ~ldilinnAg~  136 (265)
                      ..|+++.+..+
T Consensus        81 ~fD~v~~~~~l   91 (231)
T d1vl5a_          81 RFHIVTCRIAA   91 (231)
T ss_dssp             CEEEEEEESCG
T ss_pred             ccccccccccc
Confidence            57777666544

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=82.43  E-value=1.1  Score=35.59  Aligned_cols=35  Identities=31%  Similarity=0.380  Sum_probs=31.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEe
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSA   77 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~   77 (265)
                      .++.||+++|-|- +-.|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEee
Confidence            4799999999875 8899999999999999988765

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.41  E-value=0.63  Score=35.77  Aligned_cols=34  Identities=15%  Similarity=0.400  Sum_probs=29.2

Q ss_pred             cEEEEcCCCCchhHH-----HHHHHHHcCCeEEEEecCC
Q psy9256          47 KVVWITGASSGIGEA-----LALQLSKCGAKLVLSARSS   80 (265)
Q Consensus        47 k~vlItGas~GIG~a-----ia~~l~~~G~~V~~~~r~~   80 (265)
                      |++.|+++.+|.|+.     +|..|++.|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            789999999999986     5778888999999998664

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=82.40  E-value=1.2  Score=35.75  Aligned_cols=35  Identities=26%  Similarity=0.281  Sum_probs=31.2

Q ss_pred             cccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEe
Q psy9256          42 NYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSA   77 (265)
Q Consensus        42 ~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~   77 (265)
                      .+++||+++|.|- +-.|...|+.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQGf-GnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEe
Confidence            4789999999985 7899999999999999988764

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=82.26  E-value=0.76  Score=35.75  Aligned_cols=35  Identities=26%  Similarity=0.302  Sum_probs=28.3

Q ss_pred             CcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          46 NKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        46 gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      .+.|+|.|| +--|+..|..|+++|.+|++..|+++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            345777787 56689999999999999999988643

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=82.12  E-value=0.75  Score=33.36  Aligned_cols=35  Identities=14%  Similarity=0.191  Sum_probs=28.7

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCC--eEEEEecCC
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGA--KLVLSARSS   80 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~--~V~~~~r~~   80 (265)
                      .||.++|.|| +-.|.++|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4889999998 5679999999998874  688887654

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.71  E-value=1.8  Score=33.31  Aligned_cols=63  Identities=16%  Similarity=0.061  Sum_probs=46.3

Q ss_pred             CCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCC
Q psy9256          45 NNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQ  109 (265)
Q Consensus        45 ~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~  109 (265)
                      +|.+|+-.|+++|--.+...++...+.+|+.++.+++..+.+++.+...+-  .+..++..|..+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~--~n~~~~~~d~~~  137 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI--ENVIFVCGDGYY  137 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC--CSEEEEESCGGG
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcc--cccccccCchHH
Confidence            588999999999876665555555566899999999888888887776542  456666666543

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=81.69  E-value=0.54  Score=35.64  Aligned_cols=31  Identities=19%  Similarity=0.307  Sum_probs=27.4

Q ss_pred             cEEEEcCCCCchhHH-----HHHHHHHcCCeEEEEe
Q psy9256          47 KVVWITGASSGIGEA-----LALQLSKCGAKLVLSA   77 (265)
Q Consensus        47 k~vlItGas~GIG~a-----ia~~l~~~G~~V~~~~   77 (265)
                      |..+|||-++|.|+.     +|+.|+++|.+|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            678999999999985     7888999999999886

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=81.27  E-value=3.4  Score=29.70  Aligned_cols=79  Identities=16%  Similarity=0.207  Sum_probs=53.5

Q ss_pred             ccCCcEEEEcCCCCc-hhHHHHHHHHHcCC-eEEEEecCCCcHHHHHHHHHHhCCCCCcEEEEeecCCChHHHHHHHHHH
Q psy9256          43 YFNNKVVWITGASSG-IGEALALQLSKCGA-KLVLSARSSSNLERVKNLCVQAGAHPQSIYTLTLDVTQTKYHRRCFDAV  120 (265)
Q Consensus        43 ~l~gk~vlItGas~G-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  120 (265)
                      +++|+.++=.|+++| +|.    ..+.+|+ +|+.++.+++..+.+++.+...+ -..++.++..|+.+.         .
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~-~~~~~~ii~~D~~~~---------l   77 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTK-AENRFTLLKMEAERA---------I   77 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTT-CGGGEEEECSCHHHH---------H
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcc-cccchhhhccccccc---------c
Confidence            578999987777776 444    3456676 79999999888877777666544 245688888885432         1


Q ss_pred             HHHhCCccEEEeCCC
Q psy9256         121 IQQFGCLDILINNAG  135 (265)
Q Consensus       121 ~~~~g~ldilinnAg  135 (265)
                      +...++.|+++.+..
T Consensus        78 ~~~~~~fDiIf~DPP   92 (152)
T d2esra1          78 DCLTGRFDLVFLDPP   92 (152)
T ss_dssp             HHBCSCEEEEEECCS
T ss_pred             cccccccceeEechh
Confidence            233467888777654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=81.24  E-value=0.65  Score=32.92  Aligned_cols=40  Identities=20%  Similarity=0.207  Sum_probs=31.5

Q ss_pred             hccccCCcEEEEcCCCCchhHHHHHHHHHcCCeEEEEecCCC
Q psy9256          40 RLNYFNNKVVWITGASSGIGEALALQLSKCGAKLVLSARSSS   81 (265)
Q Consensus        40 ~~~~l~gk~vlItGas~GIG~aia~~l~~~G~~V~~~~r~~~   81 (265)
                      .+.+++ +.++|.|| +=||.++|..|.+.|.+|.++.+.+.
T Consensus        21 ~l~~~p-~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          21 ALKEVP-GKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             TCCCCC-SEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CccccC-CeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            344555 55666676 78999999999999999999987653