Diaphorina citri psyllid: psy92

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------64
MGNFRSHSPSAMDETIVQELLTVSLGLHGNRPLLLVRTQHELLIYQAFRHPKGALKLRFKKLKVLFVSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALSSHF
ccccccccccccccccEEEEEEEccccccccCEEEEEEcccEEEEEEEEccccccEEEEEEEEEEEEccccccccccccccccccccEEEEEEccccCEEEEEcccccEEEEEEccccEEEECccccccEEEEECcccccccccEEEEEcccEEEEEEEcccccccccCEEEEEEccccccEEEEEccccEEEEEEECccccccccccccccccccccccccccccccccCEEEEEEcccccEEEccCEEcccccEEEEEEEEEEEEEcccccccccEEEEEEEEcccccccccEEEEEEEEEEEccccccccccccEEEEEEEEEcccEEEEcccccEEEEEEccEEEEEEccccccEEEEEEEccEEEEEEEEEccEEEEEEccccEEEEEECccccCEEEEECcccccccccccccccccccEECccccEEEEEEEccccccEEEEEccccccEEEccccccCEEEEcccccEEEEEEcccccccccccEEEEEEEEcccccEEEEEEEEcccccccccccccccEEEEEEEcccEEEEEEEccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccCCHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHcccc
**************TIVQELLTVSLGLHGNRPLLLVRTQHELLIYQAFRHPKGALKLRFKKLKVLFVS**************GVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLETKTYCIVTSTAEPSTDYYKFNG******TDPRDSRFIPPLVSQFHVSLFSPFSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEA***NGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALSSHF
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MGNFRSHSPSAMDETIVQELLTVSLGLHGNRPLLLVRTQHELLIYQAFRHPKGALKLRFKKLKVLFVSDRSKRANEQPGLPRGVRISQMRYFSNIAGYQGVFLCGPHPAWLFLTSRGELRAHPMTIDGPVSTLAPFHNVNCPRGFLYFNAKSELRISVLPTHLSYDAPWPVRKVPLKCTPHFLAYHLETKTYCIVTSTAEPSTDYYKFNGEDKELVTDPRDSRFIPPLVSQFHVSLFSPFSWEEIPQTNFPLHEWEHVLCLKNVSMEYEGTLSGLRGYIALGTNYNYSEDVTCRGRILLFDIIEVVPEPGQPLTKNKIKMIYAKEQKGPVTAICHVAGFLVTAVGQKIYIWQLKDNDLTGIAFIDTEVYIASMVSVKNLILVGDYARSIALLRYQPEYRTLSLVARDYKPTQPNSKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDEFSSMGFMISDKDKNVVLFMYQPEARESNGGHRLIKKTDFHLGQHVNTFFKIRCKPSSISDAPGARSRFLTWYASLDGALGFFLPLPEKNYRRLLMLQNVMVTHTSHTGGLNPRAFRTYKGKGYYAGNPSRGIIDGSLVWKFLQLSLGERLEICKKIGSKHNDILDELYDIEALSSHF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006378 [BP]mRNA polyadenylationprobableGO:0090304, GO:0034641, GO:0006807, GO:0043631, GO:1901360, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0044238, GO:0031124, GO:0009987, GO:0006725, GO:0031123, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0016071, GO:0044237, GO:0043170, GO:0006396, GO:0006397
GO:0006379 [BP]mRNA cleavageprobableGO:0016070, GO:0016071, GO:0044238, GO:0044260, GO:0006139, GO:0009987, GO:0006725, GO:0034641, GO:0044237, GO:0043170, GO:0090304, GO:0090305, GO:0010467, GO:0006807, GO:0008150, GO:1901360, GO:0008152, GO:0046483, GO:0071704, GO:0006396, GO:0006397
GO:0003730 [MF]mRNA 3'-UTR bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003729, GO:1901363, GO:0003723
GO:0044699 [BP]single-organism processprobableGO:0008150
GO:0005847 [CC]mRNA cleavage and polyadenylation specificity factor complexprobableGO:0005849, GO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0005575, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0044428, GO:0044424, GO:0044422

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3EI3, chain A
Confidence level:confident
Coverage over the Query: 320-419,462-513,528-545
View the alignment between query and template
View the model in PyMOL
Template: 4A0A, chain A
Confidence level:probable
Coverage over the Query: 278-301,313-411,434-435,454-631
View the alignment between query and template
View the model in PyMOL
Template: 4AEZ, chain A
Confidence level:probable
Coverage over the Query: 143-198,232-304,316-429,462-512,525-547
View the alignment between query and template
View the model in PyMOL
Template: 1VYH, chain C
Confidence level:probable
Coverage over the Query: 99-198,231-304,316-419
View the alignment between query and template
View the model in PyMOL
Template: 3GRE, chain A
Confidence level:probable
Coverage over the Query: 146-211,229-304,316-394
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3ei3, chain Avery confident Alignment | Template Structure