Diaphorina citri psyllid: psy936


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340----
MSKSQPLTIRSACQVYLIPDEHTRYQVDLTLTGRPDQAYQQSGLPDSWLIIEQLRLPIEPTIPSFLFQDQKPMSWVTTNNKTGKLEGHGIAFEILNTLSAKYEFSYEIILPSRKTLLDQDGSIMNILKTGEVDMVAAFVPVLNIKKNKMAALVKSEEEELKLQLQQEEAMKWKWGIELGQSQYVVMMKRPHESATGSGLLAPFEIEVWFLILISLVLIGPIMHAIMRVRRWLSGTQSELYPISACTWFVYGALMKQGSTLNPRTDSTRIMFASWWIFIMILTAFYTANLTAFLTLSQFTLPIHSVEDIANPTNTWCAEAGGAVEYSIKLYRFQTPEHFTIFWFD
cccccccccccccEEEEECcccccEEEEEEEEccccccccccccccccEEEEEECccccccccEEEEEcccccEEEECccccccCEEEEEHHHHHHHHHHHcccEEEEEEcccccccccccccccEEEccEEEEEEEccHHHHHHHHHHHHHHccccccccEEEEEEEEEEEcccccccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHcccccEEEEEccccHHHHHHHHccccHHHHHHHccc
*******TIRSACQVYLIPDEHTRYQVDLTLTGRPDQAYQQSGLPDSWLIIEQLRLPIEPTIPSFLFQDQKPMSWVTTNNKTGKLEGHGIAFEILNTLSAKYEFSYEIILPSRKTLLDQDGSIMNILKTGEVDMVAAFVPVLNIKKNKMAALVKSEEEELKLQLQQEEAMKWKWGIELGQSQYVVMMKRPHESATGSGLLAPFEIEVWFLILISLVLIGPIMHAIMRVRRWLSGTQSELYPISACTWFVYGALMKQGSTLNPRTDSTRIMFASWWIFIMILTAFYTANLTAFLTLSQFTLPIHSVEDIANPTNTWCAEAGGAVEYSIKLYRFQTPEHFTIFWFD
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSKSQPLTIRSACQVYLIPDEHTRYQVDLTLTGRPDQAYQQSGLPDSWLIIEQLRLPIEPTIPSFLFQDQKPMSWVTTNNKTGKLEGHGIAFEILNTLSAKYEFSYEIILPSRKTLLDQDGSIMNILKTGEVDMVAAFVPVLNIKKNKMxxxxxxxxxxxxxxxxxxxxxKWKWGIELGQSQYVVMMKRPHESATGSGLLAPFEIEVWFLILISLVLIGPIMHAIMRVRRWLSGTQSELYPISACTWFVYGALMKQGSTLNPRTDSTRIMFASWWIFIMILTAFYTANLTAFLTLSQFTLPIHSVEDIANPTNTWCAEAGGAVEYSIKLYRFQTPEHFTIFWFD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044463 [CC]cell projection partprobableGO:0005575, GO:0042995, GO:0044464, GO:0005623
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0016020 [CC]membraneprobableGO:0005575
GO:0043234 [CC]protein complexprobableGO:0005575, GO:0032991
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0030425 [CC]dendriteprobableGO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995
GO:0044456 [CC]synapse partprobableGO:0005575, GO:0045202
GO:0004970 [MF]ionotropic glutamate receptor activityprobableGO:0022891, GO:0022892, GO:0038023, GO:0005215, GO:0005230, GO:0022857, GO:0008066, GO:0015276, GO:0015075, GO:0060089, GO:0004888, GO:0015267, GO:0003674, GO:0004872, GO:0004871, GO:0022834, GO:0022803, GO:0022839, GO:0022838, GO:0005216, GO:0022836

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YAE, chain A
Confidence level:confident
Coverage over the Query: 49-147,171-189
View the alignment between query and template
View the model in PyMOL
Template: 2K1E, chain A
Confidence level:probable
Coverage over the Query: 217-297
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3kg2, chain A very confident Alignment | Template Structure