Psyllid ID: psy9377

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100------
Protein Sequence
MLGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSSS
Secondary Structure (PSIPRED)
ccccccEEEcccccEEEEEEEcccEEEEEEcccHHHHHHHHHHHHHHHcccccccEEEEEEEccccEEEEEEEcccccHHHHHHcccccccccccHHHEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEcccccEEEEEEccccEEEEEEEcccHHHHHHHHHHHHHHHcccccEEEEEEEcccccEEEEEEEcccccHHHHHHcccccccccHHcccccHccccc
Coil and Loop (DISEMBL)
mlggskivgqGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLygactgnpvCLVMEYAEGGSLYNELQRSSAASLKFCkiylpfwfssss
Flexible Loop (DISEMBL)
MLGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSSS
Low Complexity Region (SEG)
MLGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSSS
Disordered region (IsUnstruct)
******IVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWF****
Disordered Region (DISOPRED)
**GGSKIVGQGAFGVVWKGLWQNQYVAVKHIET*****AFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS*
Disordered Region (DISEMBL)
MLGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSSS
Disordered Region (DISPRO)
*LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWF****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	106	2.2.26 [Sep-21-2011]
P0C8E4	606	Mitogen-activated protein	yes	N/A	0.735	0.128	0.734	4e-28
A2VDU3	579	Mitogen-activated protein	yes	N/A	0.735	0.134	0.734	5e-28
O43318	606	Mitogen-activated protein	yes	N/A	0.735	0.128	0.734	6e-28
Q5RFL3	606	Mitogen-activated protein	yes	N/A	0.735	0.128	0.734	6e-28
Q62073	579	Mitogen-activated protein	yes	N/A	0.735	0.134	0.734	6e-28
Q9V3Q6	678	Mitogen-activated protein	yes	N/A	0.726	0.113	0.5	4e-15
Q55GU0	916	Probable serine/threonine	yes	N/A	0.754	0.087	0.453	6e-14
P18161	1155	Dual specificity protein	no	N/A	0.792	0.072	0.404	7e-13
Q66L42	940	Mitogen-activated protein	no	N/A	0.698	0.078	0.456	4e-12
Q7T2V3	1005	Mitogen-activated protein	N/A	N/A	0.735	0.077	0.435	4e-12

>sp|P0C8E4|M3K7_RAT Mitogen-activated protein kinase kinase kinase 7 OS=Rattus norvegicus GN=Map3k7 PE=2 SV=1

 Score =  123 bits (308), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/79 (73%), Positives = 68/79 (86%), Gaps = 1/79 (1%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct: 40  EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 99  PVCLVMEYAEGGSLYNVLH 117

Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Mediates signal transduction of TRAF6, various cytokines including interleukin-1 (IL-1), transforming growth factor-beta (TGFB), TGFB-related factors like BMP2 and BMP4, toll-like receptors (TLR), tumor necrosis factor receptor CD40 and B-cell receptor (BCR). Ceramides are also able to activate MAP3K7/TAK1. Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade and the p38 MAPK signal transduction cascade through the phosphorylation and activation of several MAP kinase kinases like MAP2K1/MEK1, MAP2K3/MKK3, MAP2K6/MKK6 and MAP2K7/MKK7. These MAP2Ks in turn activate p38 MAPKs, c-jun N-terminal kinases (JNKs) and I-kappa-B kinase complex (IKK). Both p38 MAPK and JNK pathways control the transcription factors activator protein-1 (AP-1), while nuclear factor-kappa B is activated by IKK. MAP3K7 activates also IKBKB and MAPK8/JNK1 in response to TRAF6 signaling and mediates BMP2-induced apoptosis. In osmotic stress signaling, plays a major role in the activation of MAPK8/JNK1, but not that of NF-kappa-B.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 5

>sp|A2VDU3|M3K7_BOVIN Mitogen-activated protein kinase kinase kinase 7 OS=Bos taurus GN=MAP3K7 PE=2 SV=1

 Score =  122 bits (307), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/79 (73%), Positives = 68/79 (86%), Gaps = 1/79 (1%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct: 40  EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 99  PVCLVMEYAEGGSLYNVLH 117

Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Mediates signal transduction of TRAF6, various cytokines including interleukin-1 (IL-1), transforming growth factor-beta (TGFB), TGFB-related factors like BMP2 and BMP4, toll-like receptors (TLR), tumor necrosis factor receptor CD40 and B-cell receptor (BCR). Ceramides are also able to activate MAP3K7/TAK1. Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade and the p38 MAPK signal transduction cascade through the phosphorylation and activation of several MAP kinase kinases like MAP2K1/MEK1, MAP2K3/MKK3, MAP2K6/MKK6 and MAP2K7/MKK7. These MAP2Ks in turn activate p38 MAPKs, c-jun N-terminal kinases (JNKs) and I-kappa-B kinase complex (IKK). Both p38 MAPK and JNK pathways control the transcription factors activator protein-1 (AP-1), while nuclear factor-kappa B is activated by IKK. MAP3K7 activates also IKBKB and MAPK8/JNK1 in response to TRAF6 signaling and mediates BMP2-induced apoptosis. In osmotic stress signaling, plays a major role in the activation of MAPK8/JNK1, but not that of NF-kappa-B.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O43318|M3K7_HUMAN Mitogen-activated protein kinase kinase kinase 7 OS=Homo sapiens GN=MAP3K7 PE=1 SV=1

 Score =  122 bits (306), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 58/79 (73%), Positives = 68/79 (86%), Gaps = 1/79 (1%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct: 40  EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 99  PVCLVMEYAEGGSLYNVLH 117

Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Mediates signal transduction of TRAF6, various cytokines including interleukin-1 (IL-1), transforming growth factor-beta (TGFB), TGFB-related factors like BMP2 and BMP4, toll-like receptors (TLR), tumor necrosis factor receptor CD40 and B-cell receptor (BCR). Ceramides are also able to activate MAP3K7/TAK1. Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade and the p38 MAPK signal transduction cascade through the phosphorylation and activation of several MAP kinase kinases like MAP2K1/MEK1, MAP2K3/MKK3, MAP2K6/MKK6 and MAP2K7/MKK7. These MAP2Ks in turn activate p38 MAPKs, c-jun N-terminal kinases (JNKs) and I-kappa-B kinase complex (IKK). Both p38 MAPK and JNK pathways control the transcription factors activator protein-1 (AP-1), while nuclear factor-kappa B is activated by IKK. MAP3K7 activates also IKBKB and MAPK8/JNK1 in response to TRAF6 signaling and mediates BMP2-induced apoptosis. In osmotic stress signaling, plays a major role in the activation of MAPK8/JNK1, but not that of NF-kappa-B.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q5RFL3|M3K7_PONAB Mitogen-activated protein kinase kinase kinase 7 OS=Pongo abelii GN=MAP3K7 PE=2 SV=1

 Score =  122 bits (306), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 58/79 (73%), Positives = 68/79 (86%), Gaps = 1/79 (1%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct: 40  EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 99  PVCLVMEYAEGGSLYNVLH 117

Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Mediates signal transduction of TRAF6, various cytokines including interleukin-1 (IL-1), transforming growth factor-beta (TGFB), TGFB-related factors like BMP2 and BMP4, toll-like receptors (TLR), tumor necrosis factor receptor CD40 and B-cell receptor (BCR). Ceramides are also able to activate MAP3K7/TAK1. Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade and the p38 MAPK signal transduction cascade through the phosphorylation and activation of several MAP kinase kinases like MAP2K1/MEK1, MAP2K3/MKK3, MAP2K6/MKK6 and MAP2K7/MKK7. These MAP2Ks in turn activate p38 MAPKs, c-jun N-terminal kinases (JNKs) and I-kappa-B kinase complex (IKK). Both p38 MAPK and JNK pathways control the transcription factors activator protein-1 (AP-1), while nuclear factor-kappa B is activated by IKK. MAP3K7 activates also IKBKB and MAPK8/JNK1 in response to TRAF6 signaling and mediates BMP2-induced apoptosis. In osmotic stress signaling, plays a major role in the activation of MAPK8/JNK1, but not that of NF-kappa-B.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q62073|M3K7_MOUSE Mitogen-activated protein kinase kinase kinase 7 OS=Mus musculus GN=Map3k7 PE=1 SV=1

 Score =  122 bits (306), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 58/79 (73%), Positives = 68/79 (86%), Gaps = 1/79 (1%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct: 40  EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 99  PVCLVMEYAEGGSLYNVLH 117

Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Mediates signal transduction of TRAF6, various cytokines including interleukin-1 (IL-1), transforming growth factor-beta (TGFB), TGFB-related factors like BMP2 and BMP4, toll-like receptors (TLR), tumor necrosis factor receptor CD40 and B-cell receptor (BCR). Ceramides are also able to activate MAP3K7/TAK1. Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade and the p38 MAPK signal transduction cascade through the phosphorylation and activation of several MAP kinase kinases like MAP2K1/MEK1, MAP2K3/MKK3, MAP2K6/MKK6 and MAP2K7/MKK7. These MAP2Ks in turn activate p38 MAPKs, c-jun N-terminal kinases (JNKs) and I-kappa-B kinase complex (IKK). Both p38 MAPK and JNK pathways control the transcription factors activator protein-1 (AP-1), while nuclear factor-kappa B is activated by IKK. MAP3K7 activates also IKBKB and MAPK8/JNK1 in response to TRAF6 signaling and mediates BMP2-induced apoptosis. In osmotic stress signaling, plays a major role in the activation of MAPK8/JNK1, but not that of NF-kappa-B.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q9V3Q6|M3K7_DROME Mitogen-activated protein kinase kinase kinase 7 OS=Drosophila melanogaster GN=Tak1 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)

Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNP 66
           VG G++GVV K +W+++ VAVK     AE+K    EV+QLSRV HPNI+ L+G  +    
Sbjct: 25  VGHGSYGVVCKAVWRDKLVAVKEFFASAEQKDIEKEVKQLSRVKHPNIIALHGISSYQQA 84

Query: 67  VCLVMEYAEGGSLYNELQ 84
             L+ME+AEGGSL+N L 
Sbjct: 85  TYLIMEFAEGGSLHNFLH 102

Component of a protein kinase signal transduction cascade. Mediator of TGF-beta signal transduction. Responsible for activation of the JNK MAPK pathway (basket, bsk and hemipterous, hep) in response to LPS. Component of the NF-kappa-B pathway; relish-mediated JNK inhibition involves proteasomal degradation of Tak1; certain targets of Relish that are induced during immune responses may facilitate destruction of Tak1 and switch off the JNK cascade. Participates in diverse roles such as control of cell shape and regulation of apoptosis.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q55GU0|Y9955_DICDI Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 6/86 (6%)

Query: 5   SKIVGQGAFGVVWKGLWQNQYVAVKHIETEAE-----RKAFAVEVRQLSRVSHPNIVKLY 59
           S  +G+G FGVV+KGLW+   VA+K I+   +      + F  E+  LSR+ HPNIV L 
Sbjct: 665 SSKLGEGTFGVVYKGLWRGSSVAIKQIKINEDVNNQVLEEFRKELTILSRLRHPNIVLLM 724

Query: 60  GACTGNP-VCLVMEYAEGGSLYNELQ 84
            ACT  P +C + EY  GGSLY+ L 
Sbjct: 725 AACTAPPNLCFITEYLPGGSLYDALH 750

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P18161|SPLB_DICDI Dual specificity protein kinase splB OS=Dictyostelium discoideum GN=splB PE=2 SV=2

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 5/89 (5%)

Query: 8   VGQGAFGVVWKGLWQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           VG+GAF  VW+G W+  +VA+K +    + E  ++ F  EV+ L + +H NIV   GAC 
Sbjct: 859 VGEGAFSEVWEGWWKGIHVAIKKLKIIGDEEQFKERFIREVQNLKKGNHQNIVMFIGACY 918

Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLK 92
             P C++ EY  GGSLYN L   ++++ K
Sbjct: 919 -KPACIITEYMAGGSLYNILHNPNSSTPK 946

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q66L42|M3K10_MOUSE Mitogen-activated protein kinase kinase kinase 10 OS=Mus musculus GN=Map3k10 PE=2 SV=2

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 7/81 (8%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERK--AFAVEVRQLSR----VSHPNIVKLY 59
           +I+G G FG V++ +W+ + VAVK    + ER     A +VRQ +R    + HPNI+ L 
Sbjct: 102 EIIGVGGFGKVYRAVWRGEEVAVKAARLDPERDPAVTAEQVRQEARLFGALQHPNIIALR 161

Query: 60  GACTGNP-VCLVMEYAEGGSL 79
           GAC   P +CLVMEYA GG+L
Sbjct: 162 GACLSPPNLCLVMEYARGGAL 182

Activates the JUN N-terminal pathway.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q7T2V3|M3K10_XENLA Mitogen-activated protein kinase kinase kinase 10 OS=Xenopus laevis GN=map3k10 PE=1 SV=1

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 7/85 (8%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAER--KAFAVEVRQLSRV----SHPNIVKLY 59
           +I+G G FG V+KGLW+++ VAVK +  + +      A  VRQ +++     HPNI+ L 
Sbjct: 122 EIIGVGGFGKVYKGLWRDEEVAVKAVRHDPDEDINVTAENVRQEAKIFCMLCHPNIIALT 181

Query: 60  GACTGNP-VCLVMEYAEGGSLYNEL 83
           G C   P +CLVMEYA GG L+  L
Sbjct: 182 GVCLKPPHLCLVMEYARGGPLHRAL 206

Activates the JUN N-terminal pathway. Essential for pronephros and cement gland development.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
328704286	424	PREDICTED: mitogen-activated protein kin	0.745	0.186	0.810	6e-33
307170949	620	Mitogen-activated protein kinase kinase	0.745	0.127	0.797	3e-32
332019972	601	Mitogen-activated protein kinase kinase	0.745	0.131	0.797	3e-32
307199103	608	Mitogen-activated protein kinase kinase	0.745	0.129	0.797	3e-32
350409385	549	PREDICTED: mitogen-activated protein kin	0.745	0.143	0.772	1e-31
340713629	548	PREDICTED: mitogen-activated protein kin	0.745	0.144	0.772	1e-31
380011433	549	PREDICTED: LOW QUALITY PROTEIN: mitogen-	0.745	0.143	0.772	1e-31
328793765	548	PREDICTED: mitogen-activated protein kin	0.745	0.144	0.759	1e-31
383859401	545	PREDICTED: mitogen-activated protein kin	0.745	0.144	0.772	2e-31
156550001	533	PREDICTED: mitogen-activated protein kin	0.745	0.148	0.784	4e-31

>gi|328704286|ref|XP_001944457.2| PREDICTED: mitogen-activated protein kinase kinase kinase 7-like [Acyrthosiphon pisum]

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 64/79 (81%), Positives = 73/79 (92%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +IVG+G+FGVV++G W+N YVAVKHI+TEAERKAF VEVRQLSRV+HPNIVKLYGACT N
Sbjct: 26  EIVGKGSFGVVYRGRWRNNYVAVKHIDTEAERKAFTVEVRQLSRVNHPNIVKLYGACTSN 85

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVME+AEGGSLYN L 
Sbjct: 86  PVCLVMEFAEGGSLYNVLH 104

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307170949|gb|EFN63041.1| Mitogen-activated protein kinase kinase kinase 7 [Camponotus floridanus]

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/79 (79%), Positives = 70/79 (88%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+G+FGVVWKG W+ Q VAVKHI +E ERKAF VEVRQLSRV+HPNIVKLYGACT N
Sbjct: 26  QVVGKGSFGVVWKGRWRGQDVAVKHINSEGERKAFTVEVRQLSRVAHPNIVKLYGACTKN 85

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 86  PVCLVMEYAEGGSLYNVLH 104

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332019972|gb|EGI60432.1| Mitogen-activated protein kinase kinase kinase 7 [Acromyrmex echinatior]

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/79 (79%), Positives = 70/79 (88%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+G+FGVVWKG W+ Q VAVKHI +E ERKAF VEVRQLSRV+HPNIVKLYGACT N
Sbjct: 26  QVVGKGSFGVVWKGKWRGQDVAVKHINSEGERKAFTVEVRQLSRVAHPNIVKLYGACTKN 85

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 86  PVCLVMEYAEGGSLYNVLH 104

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307199103|gb|EFN79813.1| Mitogen-activated protein kinase kinase kinase 7 [Harpegnathos saltator]

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/79 (79%), Positives = 70/79 (88%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+G+FGVVWKG W+ Q VAVKHI +E ERKAF VEVRQLSRV+HPNIVKLYGACT N
Sbjct: 26  QVVGKGSFGVVWKGKWRGQDVAVKHINSEGERKAFTVEVRQLSRVAHPNIVKLYGACTKN 85

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 86  PVCLVMEYAEGGSLYNVLH 104

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409385|ref|XP_003488717.1| PREDICTED: mitogen-activated protein kinase kinase kinase 7-like [Bombus impatiens]

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/79 (77%), Positives = 70/79 (88%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+G+FGVVWKG W+ QYVA+K+I +E E+KAF VEVRQLSRV HPNIVKLYGACT N
Sbjct: 26  QVVGKGSFGVVWKGKWRGQYVAIKYINSEGEKKAFTVEVRQLSRVVHPNIVKLYGACTKN 85

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 86  PVCLVMEYAEGGSLYNVLH 104

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713629|ref|XP_003395343.1| PREDICTED: mitogen-activated protein kinase kinase kinase 7 [Bombus terrestris]

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/79 (77%), Positives = 70/79 (88%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+G+FGVVWKG W+ QYVA+K+I +E E+KAF VEVRQLSRV HPNIVKLYGACT N
Sbjct: 26  QVVGKGSFGVVWKGKWRGQYVAIKYINSEGEKKAFTVEVRQLSRVVHPNIVKLYGACTKN 85

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 86  PVCLVMEYAEGGSLYNVLH 104

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380011433|ref|XP_003689810.1| PREDICTED: LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 7-like [Apis florea]

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/79 (77%), Positives = 70/79 (88%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+G+FGVVWKG W+ QYVA+K+I +E E+KAF VEVRQLSRV HPNIVKLYGACT N
Sbjct: 26  QVVGKGSFGVVWKGKWKGQYVAIKYINSEGEKKAFTVEVRQLSRVIHPNIVKLYGACTKN 85

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 86  PVCLVMEYAEGGSLYNVLH 104

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328793765|ref|XP_397248.4| PREDICTED: mitogen-activated protein kinase kinase kinase 7 [Apis mellifera]

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/79 (75%), Positives = 70/79 (88%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+G+FGVVWKG W+ QYVA+K+I +E E+KAF +EVRQLSRV HPNIVKLYGACT N
Sbjct: 26  QVVGKGSFGVVWKGRWKGQYVAIKYINSEGEKKAFTIEVRQLSRVIHPNIVKLYGACTKN 85

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 86  PVCLVMEYAEGGSLYNVLH 104

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859401|ref|XP_003705183.1| PREDICTED: mitogen-activated protein kinase kinase kinase 7-like [Megachile rotundata]

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/79 (77%), Positives = 70/79 (88%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           ++VG+G+FGVVWKG W+ QYVA+K+I +E E+KAF VEVRQLSRV HPNIVKLYGACT N
Sbjct: 26  QVVGKGSFGVVWKGKWRGQYVAIKYINSEGEKKAFTVEVRQLSRVVHPNIVKLYGACTKN 85

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 86  PVCLVMEYAEGGSLYNVLH 104

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156550001|ref|XP_001604249.1| PREDICTED: mitogen-activated protein kinase kinase kinase 7-like [Nasonia vitripennis]

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 62/79 (78%), Positives = 69/79 (87%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +IVG+G+FGVVWKG W+ Q VA+KHI +E E+KAFAVEVRQLSRV H NIVKLYGACT N
Sbjct: 23  EIVGKGSFGVVWKGKWKGQSVAIKHINSEGEKKAFAVEVRQLSRVVHSNIVKLYGACTKN 82

Query: 66  PVCLVMEYAEGGSLYNELQ 84
           PVCLVMEYAEGGSLYN L 
Sbjct: 83  PVCLVMEYAEGGSLYNVLH 101

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
UNIPROTKB|D4A600	518	Map3k7 "Mitogen-activated prot	0.726	0.148	0.743	8.6e-26
UNIPROTKB|A2VDU3	579	MAP3K7 "Mitogen-activated prot	0.726	0.132	0.743	1.3e-25
UNIPROTKB|E2R3R9	579	MAP3K7 "Uncharacterized protei	0.726	0.132	0.743	1.3e-25
MGI|MGI:1346877	579	Map3k7 "mitogen-activated prot	0.726	0.132	0.743	1.3e-25
UNIPROTKB|D4A0S5	579	Map3k7 "Mitogen-activated prot	0.726	0.132	0.743	1.3e-25
UNIPROTKB|E2R3R6	606	MAP3K7 "Uncharacterized protei	0.726	0.127	0.743	1.5e-25
UNIPROTKB|O43318	606	MAP3K7 "Mitogen-activated prot	0.726	0.127	0.743	1.5e-25
UNIPROTKB|Q5RFL3	606	MAP3K7 "Mitogen-activated prot	0.726	0.127	0.743	1.5e-25
RGD|1309438	606	Map3k7 "mitogen activated prot	0.726	0.127	0.743	1.5e-25
UNIPROTKB|E1C063	617	MAP3K7 "Uncharacterized protei	0.726	0.124	0.743	1.6e-25

UNIPROTKB|D4A600 Map3k7 "Mitogen-activated protein kinase kinase kinase 7" [Rattus norvegicus (taxid:10116)]

 Score = 297 (109.6 bits), Expect = 8.6e-26, P = 8.6e-26
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query:     6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
             ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct:    40 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query:    66 PVCLVMEYAEGGSLYNEL 83
             PVCLVMEYAEGGSLYN L
Sbjct:    99 PVCLVMEYAEGGSLYNVL 116

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|A2VDU3 MAP3K7 "Mitogen-activated protein kinase kinase kinase 7" [Bos taurus (taxid:9913)]

 Score = 297 (109.6 bits), Expect = 1.3e-25, P = 1.3e-25
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query:     6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
             ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct:    40 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query:    66 PVCLVMEYAEGGSLYNEL 83
             PVCLVMEYAEGGSLYN L
Sbjct:    99 PVCLVMEYAEGGSLYNVL 116

GO:0043507 "positive regulation of JUN kinase activity" evidence=ISS

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISS

GO:0007252 "I-kappaB phosphorylation" evidence=ISS

GO:0005886 "plasma membrane" evidence=IEA

GO:0046330 "positive regulation of JNK cascade" evidence=IEA

GO:0043966 "histone H3 acetylation" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0032743 "positive regulation of interleukin-2 production" evidence=IEA

GO:0008385 "IkappaB kinase complex" evidence=IEA

GO:0007254 "JNK cascade" evidence=IEA

GO:0007250 "activation of NF-kappaB-inducing kinase activity" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0002726 "positive regulation of T cell cytokine production" evidence=IEA

GO:0001841 "neural tube formation" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|E2R3R9 MAP3K7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 297 (109.6 bits), Expect = 1.3e-25, P = 1.3e-25
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query:     6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
             ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct:    40 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query:    66 PVCLVMEYAEGGSLYNEL 83
             PVCLVMEYAEGGSLYN L
Sbjct:    99 PVCLVMEYAEGGSLYNVL 116

GO:0005524 "ATP binding" evidence=IEA

GO:0004709 "MAP kinase kinase kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

MGI|MGI:1346877 Map3k7 "mitogen-activated protein kinase kinase kinase 7" [Mus musculus (taxid:10090)]

 Score = 297 (109.6 bits), Expect = 1.3e-25, P = 1.3e-25
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query:     6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
             ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct:    40 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query:    66 PVCLVMEYAEGGSLYNEL 83
             PVCLVMEYAEGGSLYN L
Sbjct:    99 PVCLVMEYAEGGSLYNVL 116

GO:0000165 "MAPK cascade" evidence=ISO;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000186 "activation of MAPKK activity" evidence=ISO

GO:0000187 "activation of MAPK activity" evidence=ISO

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0001525 "angiogenesis" evidence=IMP

GO:0001841 "neural tube formation" evidence=IMP

GO:0002726 "positive regulation of T cell cytokine production" evidence=ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IDA

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO

GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IMP

GO:0007250 "activation of NF-kappaB-inducing kinase activity" evidence=ISO

GO:0007252 "I-kappaB phosphorylation" evidence=ISO;IGI

GO:0007254 "JNK cascade" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0032743 "positive regulation of interleukin-2 production" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=IGI;IMP

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO;IGI

GO:0043507 "positive regulation of JUN kinase activity" evidence=ISO

GO:0043966 "histone H3 acetylation" evidence=ISO

GO:0046330 "positive regulation of JNK cascade" evidence=IGI

GO:0046872 "metal ion binding" evidence=IEA

GO:0051403 "stress-activated MAPK cascade" evidence=ISO

GO:0060546 "negative regulation of necroptosis" evidence=IMP

GO:2000378 "negative regulation of reactive oxygen species metabolic process" evidence=IMP

UNIPROTKB|D4A0S5 Map3k7 "Mitogen-activated protein kinase kinase kinase 7" [Rattus norvegicus (taxid:10116)]

 Score = 297 (109.6 bits), Expect = 1.3e-25, P = 1.3e-25
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query:     6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
             ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct:    40 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query:    66 PVCLVMEYAEGGSLYNEL 83
             PVCLVMEYAEGGSLYN L
Sbjct:    99 PVCLVMEYAEGGSLYNVL 116

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004709 "MAP kinase kinase kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2R3R6 MAP3K7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 297 (109.6 bits), Expect = 1.5e-25, P = 1.5e-25
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query:     6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
             ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct:    40 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query:    66 PVCLVMEYAEGGSLYNEL 83
             PVCLVMEYAEGGSLYN L
Sbjct:    99 PVCLVMEYAEGGSLYNVL 116

GO:0005524 "ATP binding" evidence=IEA

GO:0004709 "MAP kinase kinase kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|O43318 MAP3K7 "Mitogen-activated protein kinase kinase kinase 7" [Homo sapiens (taxid:9606)]

 Score = 297 (109.6 bits), Expect = 1.5e-25, P = 1.5e-25
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query:     6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
             ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct:    40 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query:    66 PVCLVMEYAEGGSLYNEL 83
             PVCLVMEYAEGGSLYN L
Sbjct:    99 PVCLVMEYAEGGSLYNVL 116

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0001841 "neural tube formation" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0046330 "positive regulation of JNK cascade" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0032743 "positive regulation of interleukin-2 production" evidence=IMP

GO:0050852 "T cell receptor signaling pathway" evidence=NAS;TAS

GO:0002726 "positive regulation of T cell cytokine production" evidence=IMP

GO:0007250 "activation of NF-kappaB-inducing kinase activity" evidence=IMP

GO:0050870 "positive regulation of T cell activation" evidence=IC

GO:0051403 "stress-activated MAPK cascade" evidence=IDA;TAS

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP

GO:0004709 "MAP kinase kinase kinase activity" evidence=IDA

GO:0043507 "positive regulation of JUN kinase activity" evidence=IMP;IDA

GO:0007252 "I-kappaB phosphorylation" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0008385 "IkappaB kinase complex" evidence=IPI

GO:0000186 "activation of MAPKK activity" evidence=IDA

GO:0000187 "activation of MAPK activity" evidence=IDA;TAS

GO:0007254 "JNK cascade" evidence=IDA;TAS

GO:0002224 "toll-like receptor signaling pathway" evidence=TAS

GO:0002755 "MyD88-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0002756 "MyD88-independent toll-like receptor signaling pathway" evidence=TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=TAS

GO:0008063 "Toll signaling pathway" evidence=TAS

GO:0010008 "endosome membrane" evidence=TAS

GO:0034130 "toll-like receptor 1 signaling pathway" evidence=TAS

GO:0034134 "toll-like receptor 2 signaling pathway" evidence=TAS

GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS

GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS

GO:0035666 "TRIF-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0035872 "nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway" evidence=TAS

GO:0045087 "innate immune response" evidence=TAS

GO:0051092 "positive regulation of NF-kappaB transcription factor activity" evidence=TAS

GO:0070423 "nucleotide-binding oligomerization domain containing signaling pathway" evidence=TAS

GO:0043966 "histone H3 acetylation" evidence=IDA

GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex" evidence=IDA

UNIPROTKB|Q5RFL3 MAP3K7 "Mitogen-activated protein kinase kinase kinase 7" [Pongo abelii (taxid:9601)]

 Score = 297 (109.6 bits), Expect = 1.5e-25, P = 1.5e-25
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query:     6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
             ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct:    40 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query:    66 PVCLVMEYAEGGSLYNEL 83
             PVCLVMEYAEGGSLYN L
Sbjct:    99 PVCLVMEYAEGGSLYNVL 116

GO:0000165 "MAPK cascade" evidence=ISS

GO:0000186 "activation of MAPKK activity" evidence=ISS

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISS

GO:0007252 "I-kappaB phosphorylation" evidence=ISS

GO:0043507 "positive regulation of JUN kinase activity" evidence=ISS

RGD|1309438 Map3k7 "mitogen activated protein kinase kinase kinase 7" [Rattus norvegicus (taxid:10116)]

 Score = 297 (109.6 bits), Expect = 1.5e-25, P = 1.5e-25
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query:     6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
             ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct:    40 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 98

Query:    66 PVCLVMEYAEGGSLYNEL 83
             PVCLVMEYAEGGSLYN L
Sbjct:    99 PVCLVMEYAEGGSLYNVL 116

GO:0000165 "MAPK cascade" evidence=ISO;IDA

GO:0000186 "activation of MAPKK activity" evidence=ISO;IDA

GO:0000187 "activation of MAPK activity" evidence=ISO

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0001525 "angiogenesis" evidence=ISO

GO:0001841 "neural tube formation" evidence=ISO

GO:0002726 "positive regulation of T cell cytokine production" evidence=ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=ISO

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISO;ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA;IDA

GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=ISO

GO:0007250 "activation of NF-kappaB-inducing kinase activity" evidence=ISO

GO:0007252 "I-kappaB phosphorylation" evidence=ISO;ISS

GO:0007254 "JNK cascade" evidence=ISO

GO:0032743 "positive regulation of interleukin-2 production" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO;IMP

GO:0043507 "positive regulation of JUN kinase activity" evidence=ISO;ISS

GO:0043966 "histone H3 acetylation" evidence=ISO

GO:0046330 "positive regulation of JNK cascade" evidence=ISO

GO:0051403 "stress-activated MAPK cascade" evidence=ISO

GO:0060546 "negative regulation of necroptosis" evidence=ISO

GO:2000378 "negative regulation of reactive oxygen species metabolic process" evidence=ISO

GO:0008385 "IkappaB kinase complex" evidence=ISO

UNIPROTKB|E1C063 MAP3K7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 297 (109.6 bits), Expect = 1.6e-25, P = 1.6e-25
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query:     6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
             ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct:    30 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 88

Query:    66 PVCLVMEYAEGGSLYNEL 83
             PVCLVMEYAEGGSLYN L
Sbjct:    89 PVCLVMEYAEGGSLYNVL 106

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0001841 "neural tube formation" evidence=IEA

GO:0002726 "positive regulation of T cell cytokine production" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0004709 "MAP kinase kinase kinase activity" evidence=IEA

GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0007250 "activation of NF-kappaB-inducing kinase activity" evidence=IEA

GO:0007252 "I-kappaB phosphorylation" evidence=IEA

GO:0007254 "JNK cascade" evidence=IEA

GO:0008385 "IkappaB kinase complex" evidence=IEA

GO:0032743 "positive regulation of interleukin-2 production" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0043507 "positive regulation of JUN kinase activity" evidence=IEA

GO:0043966 "histone H3 acetylation" evidence=IEA

GO:0046330 "positive regulation of JNK cascade" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A2VDU3	M3K7_BOVIN	2, ., 7, ., 1, 1, ., 2, 5	0.7341	0.7358	0.1347	yes	N/A
Q5RFL3	M3K7_PONAB	2, ., 7, ., 1, 1, ., 2, 5	0.7341	0.7358	0.1287	yes	N/A
P0C8E4	M3K7_RAT	2, ., 7, ., 1, 1, ., 2, 5	0.7341	0.7358	0.1287	yes	N/A
O43318	M3K7_HUMAN	2, ., 7, ., 1, 1, ., 2, 5	0.7341	0.7358	0.1287	yes	N/A
Q62073	M3K7_MOUSE	2, ., 7, ., 1, 1, ., 2, 5	0.7341	0.7358	0.1347	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	106
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-25
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-24
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-24
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-23
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	7e-23
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-22
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-21
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-19
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	7e-18
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-16
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-16
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-16
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-15
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-14
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-14
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-14
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-14
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-14
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	7e-14
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-13
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-13
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-13
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-13
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-13
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	7e-13
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-12
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-12
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-12
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-12
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-12
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-12
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	6e-12
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	7e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-11
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-11
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-11
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-11
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-11
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-11
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	3e-11
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-11
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	8e-11
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-10
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-10
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-10
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-10
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-10
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-10
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	3e-10
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-10
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-10
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	7e-10
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	7e-10
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	9e-10
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	9e-10
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-09
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-09
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-09
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	3e-09
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-09
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-09
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	3e-09
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	4e-09
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	5e-09
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	5e-09
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	5e-09
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	7e-09
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	8e-09
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	9e-09
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-08
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-08
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-08
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-08
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-08
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-08
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-08
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-08
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	3e-08
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-08
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	3e-08
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	4e-08
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	4e-08
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	4e-08
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	4e-08
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	4e-08
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	5e-08
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	5e-08
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	7e-08
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	7e-08
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	8e-08
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	9e-08
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	2e-07
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-07
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-07
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	3e-07
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	3e-07
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	4e-07
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-07
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	5e-07
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	8e-07
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	9e-07
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	9e-07
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-06
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-06
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-06
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-06
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-06
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-06
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	3e-06
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	4e-06
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	4e-06
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-06
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	5e-06
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	5e-06
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	6e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	6e-06
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	7e-06
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	7e-06
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	7e-06
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	8e-06
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	8e-06
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	8e-06
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	9e-06
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-05
COG2112	201	COG2112, COG2112, Predicted Ser/Thr protein kinase	1e-05
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	1e-05
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-05
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-05
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-05
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-05
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-05
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-05
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-05
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-05
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-05
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	3e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	3e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-05
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-05
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	5e-05
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	6e-05
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	6e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	8e-05
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	8e-05
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	9e-05
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-04
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	1e-04
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-04
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-04
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-04
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	1e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	2e-04
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	3e-04
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	3e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-04
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	4e-04
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	4e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-04
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	4e-04
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-04
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	4e-04
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	4e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	5e-04
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	7e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	7e-04
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	7e-04
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	7e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	8e-04
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	8e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	0.001
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.001
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.001
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	0.001
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	0.001
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.001
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	0.002
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	0.002
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	0.002
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	0.002
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	0.002
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	0.002
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	0.002
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	0.002
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	0.002
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	0.003
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.003
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.003
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.004
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	0.004

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 94.1 bits (235), Expect = 5e-25
 Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 10/90 (11%)

Query: 6  KIVGQGAFGVVWKGLW------QNQYVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
          K +G+GAFG V+KG            VAVK      +E ER+ F  E   + ++SHPNIV
Sbjct: 5  KKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIV 64

Query: 57 KLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
          +L G CT G P+ +V EY  GG L + L++
Sbjct: 65 RLLGVCTQGEPLYIVTEYMPGGDLLDFLRK 94

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 91.1 bits (227), Expect = 3e-24
 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 6/84 (7%)

Query: 8  VGQGAFGVVWKGLWQ--NQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
          +G+G FG V+    +   + VA+K I   ++ +  +    E+  L +++HPNIVKLYG  
Sbjct: 1  LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 63 -TGNPVCLVMEYAEGGSLYNELQR 85
             N + LVMEY EGGSL + L+ 
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKE 84

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 91.8 bits (229), Expect = 3e-24
 Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 9/83 (10%)

Query: 6  KIVGQGAFGVVWKGLWQNQY-----VAVK---HIETEAERKAFAVEVRQLSRVSHPNIVK 57
          K +G+GAFG V+KG  + +      VAVK      +E ERK F  E R + ++ HPN+V+
Sbjct: 1  KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 58 LYGACT-GNPVCLVMEYAEGGSL 79
          L G CT   P+ LV+EY EGG L
Sbjct: 61 LLGVCTEEEPLYLVLEYMEGGDL 83

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 88.8 bits (221), Expect = 5e-23
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 10/97 (10%)

Query: 6   KIVGQGAFGVVWKGLW------QNQYVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           K +G+GAFG V+KG        +   VAVK      +E + + F  E R + ++ HPNIV
Sbjct: 5   KKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIV 64

Query: 57  KLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           KL G CT   P+ +VMEY  GG L + L+++    L 
Sbjct: 65  KLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELS 101

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 88.4 bits (220), Expect = 7e-23
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 10/85 (11%)

Query: 5  SKIVGQGAFGVVWKGLWQNQY------VAVK---HIETEAERKAFAVEVRQLSRVSHPNI 55
           K +G+GAFG V+KG  + +       VAVK      +E + + F  E R + ++ HPN+
Sbjct: 4  GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 56 VKLYGACT-GNPVCLVMEYAEGGSL 79
          VKL G CT   P+ +VMEY EGG L
Sbjct: 64 VKLLGVCTEEEPLYIVMEYMEGGDL 88

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 86.8 bits (216), Expect = 3e-22
 Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
           + +G+G+FG V+    +   + VA+K I   + + +R+    E++ L ++ HPNIV+LY 
Sbjct: 5   EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYD 64

Query: 61  AC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
                + + LVMEY EGG L++ L++    S    + YL
Sbjct: 65  VFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYL 103

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 83.5 bits (207), Expect = 5e-21
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 7/88 (7%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLY 59
          + +G G+FG V+K   +   + VAVK +    E   + +    E+R L R+SHPNIV+L 
Sbjct: 5  RKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLI 64

Query: 60 GAC-TGNPVCLVMEYAEGGSLYNELQRS 86
           A    + + LVMEY EGG L++ L R 
Sbjct: 65 DAFEDKDHLYLVMEYCEGGDLFDYLSRG 92

Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 77.7 bits (192), Expect = 8e-19
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 7/99 (7%)

Query: 7   IVGQGAFGVVWKGLWQN--QYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYG 60
           ++G+GAFGVV+KGL      +VA+K I      E   K+   E+  L  + HPNIVK  G
Sbjct: 7   LIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIG 66

Query: 61  -ACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
              T + + +++EYAE GSL   +++          +Y+
Sbjct: 67  SIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYV 105

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 75.3 bits (186), Expect = 7e-18
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 6/86 (6%)

Query: 6  KIVGQGAFGVVWKGL--WQNQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
          K++GQG+ GVV+K       +  A+K I     E  RK    E++ L     P +VK YG
Sbjct: 7  KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYG 66

Query: 61 A-CTGNPVCLVMEYAEGGSLYNELQR 85
          A      + +V+EY +GGSL + L++
Sbjct: 67 AFYKEGEISIVLEYMDGGSLADLLKK 92

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 71.4 bits (176), Expect = 2e-16
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 17/109 (15%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           K +G+G+FG V+        +   +K I+    +E ER+    EV+ L +++HPNI+K Y
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY 65

Query: 60  GA-CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLP-----FWF 102
            +      +C+VMEYA+GG L  ++++      K      P      WF
Sbjct: 66  ESFEEKGKLCIVMEYADGGDLSQKIKKQ-----KKEGKPFPEEQILDWF 109

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 70.9 bits (174), Expect = 3e-16
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 3/83 (3%)

Query: 6  KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          K +G G FGVV  G W+ +  VA+K I E       F  E + + ++SHPN+V+LYG CT
Sbjct: 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCT 69

Query: 64 GN-PVCLVMEYAEGGSLYNELQR 85
             P+ +V EY   G L N L+ 
Sbjct: 70 KQRPIFIVTEYMANGCLLNYLRE 92

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 71.0 bits (175), Expect = 3e-16
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 9/83 (10%)

Query: 6  KIVGQGAFGVVWKGL--WQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
          +++G+G+FG V+  L     + +AVK +E    +E E +A   E+R LS + HPNIV+ Y
Sbjct: 6  ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 60 GAC---TGNPVCLVMEYAEGGSL 79
          G+      N + + +EY  GGSL
Sbjct: 66 GSERDEEKNTLNIFLEYVSGGSL 88

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 69.0 bits (169), Expect = 2e-15
 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 8  VGQGAFGVVWKG-LWQNQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          +G+G FG V+KG L  N  VAVK   +      ++ F  E   L +  HPNIVKL G C 
Sbjct: 3  IGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV 62

Query: 64 -GNPVCLVMEYAEGGSLYNELQRSSAA 89
             P+ +VME   GGSL   L++    
Sbjct: 63 QKQPIYIVMELVPGGSLLTFLRKKKNR 89

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 66.5 bits (163), Expect = 1e-14
 Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 5/77 (6%)

Query: 8  VGQGAFGVVWKGLWQN--QYVAVK--HIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          +G+G FG V+K   +   + VA+K   +E++ +++    E++ L +  HPNIVK YG+  
Sbjct: 8  IGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL 67

Query: 64 -GNPVCLVMEYAEGGSL 79
            + + +VME+  GGSL
Sbjct: 68 KKDELWIVMEFCSGGSL 84

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 66.7 bits (163), Expect = 1e-14
 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 3/81 (3%)

Query: 8  VGQGAFGVVWKGLWQNQYVAVKHIETEAERK-AFAVEVRQLSRVSHPNIVKLYGAC-TGN 65
          +G+G FG V  G ++ Q VAVK ++ ++    AF  E   ++ + HPN+V+L G    GN
Sbjct: 14 IGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGN 73

Query: 66 PVCLVMEYAEGGSLYNELQRS 86
          P+ +V EY   GSL + L RS
Sbjct: 74 PLYIVTEYMAKGSLVDYL-RS 93

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 66.4 bits (162), Expect = 2e-14
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 14/101 (13%)

Query: 6  KIVGQGAFGVVW--KGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
          ++VG+GAFG+V   +     + V +K I     T+ ER A   E + L  +SHPNI++ Y
Sbjct: 6  RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYY 65

Query: 60 GA-CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLP 99
                  + +VMEYA GG+L   +Q       K C   L 
Sbjct: 66 ENFLEDKALMIVMEYAPGGTLAEYIQ-------KRCNSLLD 99

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 66.3 bits (162), Expect = 2e-14
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 6  KIVGQGAFGVVWKGLWQNQY-----VAVKHIETEAERKA---FAVEVRQLSRVSHPNIVK 57
          K +G G+FGVV +G W         VAVK ++++        F  E   +  + H N+++
Sbjct: 1  KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60

Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQRSSAASL 91
          LYG    +P+ +V E A  GSL + L++ +    
Sbjct: 61 LYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHF 94

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 66.1 bits (161), Expect = 2e-14
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 8  VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          +G G FG+VW G W  +  VA+K I E     + F  E + + ++SHP +V+LYG CT  
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTER 71

Query: 66 -PVCLVMEYAEGGSLYNELQ 84
           P+CLV E+ E G L + L+
Sbjct: 72 SPICLVFEFMEHGCLSDYLR 91

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 65.1 bits (159), Expect = 7e-14
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)

Query: 26  VAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPV-CLVMEYAEGGSLYN 81
           VAVK +    ++  R+ F  EV+ LSR+S PNI +L G CT +P  C++MEY E G L  
Sbjct: 49  VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQ 108

Query: 82  ELQRSSAAS 90
            LQ+  A +
Sbjct: 109 FLQKHVAET 117

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 63.9 bits (156), Expect = 1e-13
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 8/85 (9%)

Query: 8  VGQGAFGVVWKGLWQNQ-----YVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLY 59
          +G G FG V KG++  +      VAVK ++ E     +K F  E   ++++ HP IV+L 
Sbjct: 3  LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 60 GACTGNPVCLVMEYAEGGSLYNELQ 84
          G C G P+ LVME A  G L   L+
Sbjct: 63 GVCKGEPLMLVMELAPLGPLLKYLK 87

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 62.9 bits (153), Expect = 3e-13
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 6   KIVGQGAFGVVWKGLWQN-QYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FG VW G +     VA+K + +     +AF  E   + ++ HP +V+LY   T
Sbjct: 12  KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT 71

Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
             P+ ++ EY E GSL + L+      L   K+
Sbjct: 72  QEPIYIITEYMENGSLVDFLKTPEGIKLTINKL 104

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 62.7 bits (153), Expect = 3e-13
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)

Query: 9   GQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT-GN 65
           G G FG VW G W     VAVK +       +AF  E + + ++ H  +V+LY  C+   
Sbjct: 15  GAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE 74

Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKF 93
           P+ +V EY   GSL + L+      L+ 
Sbjct: 75  PIYIVTEYMSKGSLLDFLKSGEGKKLRL 102

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 62.8 bits (153), Expect = 3e-13
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 8   VGQGAFGVVWKGLWQNQY-VAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACT-G 64
           +G G FG VW+GLW N   VAVK ++    + K F  E + + ++ HP +++LY  CT  
Sbjct: 14  LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE 73

Query: 65  NPVCLVMEYAEGGSLYNELQRSSAASLK 92
            P+ +V E  + GSL   LQ  +  +LK
Sbjct: 74  EPIYIVTELMKYGSLLEYLQGGAGRALK 101

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 62.3 bits (152), Expect = 4e-13
 Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 6/77 (7%)

Query: 9  GQGAFGVVWKGL--WQNQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVKLYGAC- 62
          G G  GVV K L     + +AVK I     EA +K    E+  L + + P IV  YGA  
Sbjct: 10 GAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY 69

Query: 63 TGNPVCLVMEYAEGGSL 79
              + + MEY +GGSL
Sbjct: 70 NNGDISICMEYMDGGSL 86

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 62.0 bits (151), Expect = 7e-13
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 9/83 (10%)

Query: 6  KIVGQGAFGVVWKGLW-----QNQY-VAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
          K++G GAFG V+KG+W     + +  VA+K +  E   KA      E   ++ V HP++V
Sbjct: 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVV 72

Query: 57 KLYGACTGNPVCLVMEYAEGGSL 79
          +L G C  + V L+ +    G L
Sbjct: 73 RLLGICLSSQVQLITQLMPLGCL 95

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 61.4 bits (149), Expect = 1e-12
 Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 3/82 (3%)

Query: 6  KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          K +G G FGVV  G W+ QY VA+K I E       F  E + + ++SH  +V+LYG CT
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCT 69

Query: 64 GN-PVCLVMEYAEGGSLYNELQ 84
             P+ +V EY   G L N L+
Sbjct: 70 KQRPIYIVTEYMSNGCLLNYLR 91

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 60.5 bits (147), Expect = 3e-12
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 5  SKIVGQGAFGVVWKGLWQNQY-----VAVKHIETEAE---RKAFAVEVRQLSRVSHPNIV 56
           + +G+G FG V++G++ +       VAVK  +       R+ F  E   + +  HP+IV
Sbjct: 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70

Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQR 85
          KL G  T NPV +VME A  G L + LQ 
Sbjct: 71 KLIGVITENPVWIVMELAPLGELRSYLQV 99

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 60.2 bits (146), Expect = 3e-12
 Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 12/97 (12%)

Query: 8   VGQGAFGVVWKG----LWQNQ---YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIVK 57
           +G+GAFG V+ G    L        VAVK ++  A   A   F  E   L+   H NIVK
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
            YG CT G+P  +V EY E G L N+  RS      F
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDL-NKFLRSHGPDAAF 108

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 60.1 bits (146), Expect = 4e-12
 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 4/88 (4%)

Query: 8   VGQGAFGVVWKGLWQNQY-VAVKHIETEAERKA--FAVEVRQLSRVSHPNIVKLYGACT- 63
           +G G FG VW+GLW+N+  VA+K ++++   K   F  EV+ L R+ H +++ L+  C+ 
Sbjct: 14  LGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV 73

Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASL 91
           G PV ++ E  E GSL   L+      L
Sbjct: 74  GEPVYIITELMEKGSLLAFLRSPEGQVL 101

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 59.7 bits (145), Expect = 4e-12
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 6  KIVGQGAFGVVWKGLW-----QNQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
          K++G G FG V +G       +   VA+K ++   ++ +R  F  E   + +  HPNI++
Sbjct: 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIR 69

Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQR 85
          L G  T   PV ++ EY E GSL   L+ 
Sbjct: 70 LEGVVTKSRPVMIITEYMENGSLDKFLRE 98

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 59.8 bits (145), Expect = 4e-12
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 6  KIVGQGAFGVVWKG--LWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
          K +G+G++G V+K   L  NQ+ A+K ++    ++ ER+    E+R L+ V+HPNI+   
Sbjct: 6  KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYK 65

Query: 60 GA-CTGNPVCLVMEYAEGGSLYNELQRSSA 88
           A   GN +C+VMEYA  G L   + +   
Sbjct: 66 EAFLDGNKLCIVMEYAPFGDLSKAISKRKK 95

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 59.1 bits (143), Expect = 6e-12
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 6  KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          K +G G FGVV  G W+ Q  VA+K I E     + F  E + + ++SHP +V+LYG CT
Sbjct: 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCT 69

Query: 64 GN-PVCLVMEYAEGGSLYNELQR 85
             P+ +V E+ E G L N L++
Sbjct: 70 QQKPLYIVTEFMENGCLLNYLRQ 92

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 59.5 bits (144), Expect = 7e-12
 Identities = 39/110 (35%), Positives = 51/110 (46%), Gaps = 22/110 (20%)

Query: 8   VGQGAFGVVWK----GLWQNQ---YVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVK 57
           +GQGAFG V++    GL   +    VAVK ++ EA    +  F  E   ++   HPNIVK
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSSS 106
           L G C  G P+CL+ EY   G L   L+  S           P    S S
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFLRHRS-----------PRAQCSLS 111

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 59.0 bits (143), Expect = 1e-11
 Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 12/96 (12%)

Query: 5   SKIVGQGAFGVVWKGLWQNQ------YVAVKHIET---EAERKAFAVEVRQLSRVSHPNI 55
            K +G+G FG V    +          VAVK +     E  R  F  E+  L  + H NI
Sbjct: 9   IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI 68

Query: 56  VKLYGACT---GNPVCLVMEYAEGGSLYNELQRSSA 88
           VK  G C    G  + L+MEY   GSL + LQR   
Sbjct: 69  VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD 104

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 58.7 bits (142), Expect = 1e-11
 Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 12/97 (12%)

Query: 6  KIVGQGAFGVVWKGLWQN--------QYVAVKHIE---TEAERKAFAVEVRQLSRVSHPN 54
            +G GAFG V++G   +          VAVK +    T+ E+K F  E   +S  +HPN
Sbjct: 1  NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60

Query: 55 IVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAAS 90
          IVKL G C  N P  ++ME  EGG L + L+ +    
Sbjct: 61 IVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVER 97

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 58.6 bits (143), Expect = 1e-11
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 7/77 (9%)

Query: 6  KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
          + +G+G +GVV+K       + VA+K I  + E +        E+  L  + HPNIVKL 
Sbjct: 5  EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLL 64

Query: 60 G-ACTGNPVCLVMEYAE 75
              T   + LV EY +
Sbjct: 65 DVIHTERKLYLVFEYCD 81

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 7  IVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGA-CT 63
           +G+G++G V+K + +   Q VA+K +  E + +    E+  L +   P IVK YG+   
Sbjct: 10 KLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFK 69

Query: 64 GNPVCLVMEYAEGGSL 79
             + +VMEY   GS+
Sbjct: 70 NTDLWIVMEYCGAGSV 85

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 58.2 bits (141), Expect = 2e-11
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)

Query: 8   VGQGAFGVVWKG-------LWQNQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVK 57
           +G+GAFG V+KG             VA+K ++  AE   ++ F  E   +S + HPNIV 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 58  LYGACTGN-PVCLVMEYAEGGSLYNELQRSSAAS 90
           L G CT   P C++ EY   G L+  L R+S  S
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHS 106

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 57.7 bits (139), Expect = 2e-11
 Identities = 29/79 (36%), Positives = 48/79 (60%)

Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          +I+G+G FG V +G +  Q VAVK+I+ +   +AF  E   ++++ H N+V+L G    N
Sbjct: 12 EIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN 71

Query: 66 PVCLVMEYAEGGSLYNELQ 84
           + +VME    G+L N L+
Sbjct: 72 GLYIVMELMSKGNLVNFLR 90

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 57.7 bits (139), Expect = 3e-11
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 11/92 (11%)

Query: 6  KIVGQGAFGVVWK-------GLWQNQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNI 55
          K +G+G FG V K       G      VAVK ++  A   E +    E   L +V+HP++
Sbjct: 6  KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHV 65

Query: 56 VKLYGACTGN-PVCLVMEYAEGGSLYNELQRS 86
          +KLYGAC+ + P+ L++EYA+ GSL + L+ S
Sbjct: 66 IKLYGACSQDGPLLLIVEYAKYGSLRSFLRES 97

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 56.8 bits (138), Expect = 5e-11
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 11/103 (10%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAV--EVRQLSRVS-HPNIVK 57
           KI+G+G+F  V     +  N+  A+K ++      E+K   V  E   L+R++ HP I+K
Sbjct: 7   KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIK 66

Query: 58  LYGACTGNPVCL--VMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LY     +   L  V+EYA  G L   +++  +   K  + Y 
Sbjct: 67  LYY-TFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYA 108

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 57.1 bits (136), Expect = 7e-11
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 8/89 (8%)

Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAV-----EVRQLSRVSHP-NIVKLY 59
          + +G+G+FG V+      + VA+K +  + E K+  V     E++ L+ ++HP NIVKLY
Sbjct: 6  RKLGEGSFGEVYLA-RDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLY 64

Query: 60 GAC-TGNPVCLVMEYAEGGSLYNELQRSS 87
                  + LVMEY +GGSL + L++  
Sbjct: 65 DFFQDEGSLYLVMEYVDGGSLEDLLKKIG 93

Length = 384

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 56.4 bits (137), Expect = 8e-11
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 12/100 (12%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
             +G+G +G V+K       + VA+K I  E E++ F +    E++ L ++ HPNIV+L 
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLK 64

Query: 60  GACTGNP---VCLVMEYAE---GGSLYNELQRSSAASLKF 93
              T      + +V EY +    G L +   + + + +K 
Sbjct: 65  EIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKC 104

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 26/108 (24%)

Query: 8  VGQGAFGVVWKGLWQNQYVAVKHIETE------AERKAFAVEVRQ----------LSRVS 51
          +G+G+FG V         + V+  +T         +K   ++ ++          LSR++
Sbjct: 1  LGKGSFGKV---------LLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN 51

Query: 52 HPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
          HP IVKL+ A  T   + LV+EYA GG L++ L +    S +  + Y 
Sbjct: 52 HPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYA 99

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 8   VGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV-EVRQLSRVSHPNIVKLYGA-CT 63
           +G+GA G V+K       + VA+K +    + K   + E+  +    HPNIV  Y +   
Sbjct: 27  IGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLV 86

Query: 64  GNPVCLVMEYAEGGSL 79
           G+ + +VMEY +GGSL
Sbjct: 87  GDELWVVMEYMDGGSL 102

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 55.4 bits (134), Expect = 1e-10
 Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 8/83 (9%)

Query: 4  GSKIVGQGAFGVVWKG--LWQNQYVAVKHIETEAER----KAFAVEVRQLSRVSHPNIVK 57
          G+KI G G FG V+    L   + +AVK I  +       K  A E++ L  + HPN+VK
Sbjct: 5  GNKI-GGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVK 63

Query: 58 LYGA-CTGNPVCLVMEYAEGGSL 79
           YG       V + MEY  GG+L
Sbjct: 64 YYGVEVHREKVYIFMEYCSGGTL 86

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 55.8 bits (135), Expect = 2e-10
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 8  VGQGAFGVVWK--GLWQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          VG+GA+GVV K       + VA+K      + E  +K    EV+ L ++ H NIV L  A
Sbjct: 9  VGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEA 68

Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRS 86
                + LV EY E  +L   L+ S
Sbjct: 69 FRRKGRLYLVFEYVE-RTLLELLEAS 93

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 55.6 bits (134), Expect = 2e-10
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 12/100 (12%)

Query: 6   KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
           K +G GAFG V +    GL ++     VAVK ++  A   ER+A   E++ +S + +H N
Sbjct: 41  KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHEN 100

Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
           IV L GACT G P+ ++ EY   G L N L+R   + L  
Sbjct: 101 IVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTL 140

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 54.6 bits (131), Expect = 3e-10
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 6  KIVGQGAFGVVW--KGLWQNQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLY 59
          K +G+G+FG ++  K    +++  +K I+       E++A   EV  L+++ HPNIV  +
Sbjct: 6  KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFF 65

Query: 60 GACTGN-PVCLVMEYAEGGSLYNELQR 85
           +   N  + +VMEY +GG L   + R
Sbjct: 66 ASFQENGRLFIVMEYCDGGDLMKRINR 92

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 54.9 bits (132), Expect = 3e-10
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 12/100 (12%)

Query: 6   KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
           K +G GAFG V +    GL +      VAVK ++  A   ER+A   E++ LS +  H N
Sbjct: 44  KTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKN 103

Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
           IV L GACT G PV ++ EY   G L N L++ +   L F
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNF 143

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 54.2 bits (131), Expect = 4e-10
 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 11/84 (13%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHIE-TEAERKAFAVEVRQLSRVS-HPNIVKLYGA 61
          +++G+G +G V+K   +   Q VA+K ++  E E +    E   L + S HPNI   YGA
Sbjct: 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGA 71

Query: 62 CTG-NPVC------LVMEYAEGGS 78
              NP        LVME   GGS
Sbjct: 72 FIKKNPPGNDDQLWLVMELCGGGS 95

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 54.2 bits (130), Expect = 5e-10
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 5/85 (5%)

Query: 6  KIVGQGAFGVVWKGLWQNQY-VAVKHIETEAERK---AFAVEVRQLSRVSHPNIVKLYGA 61
          +++G+G FG V+KG  +++  VAVK  + +  ++    F  E R L +  HPNIVKL G 
Sbjct: 1  ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGV 60

Query: 62 CTG-NPVCLVMEYAEGGSLYNELQR 85
          CT   P+ +VME   GG   + L++
Sbjct: 61 CTQRQPIYIVMELVPGGDFLSFLRK 85

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 54.0 bits (130), Expect = 7e-10
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 6   KIVGQGAFGVVWKGLW-------QNQYVAVKHIE---TEAERKAFAVEVRQLSRV-SHPN 54
           K +G+GAFG V K          +   VAVK ++   TE +      E+  +  +  H N
Sbjct: 18  KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 77

Query: 55  IVKLYGACTGN-PVCLVMEYAEGGSLYNELQR 85
           I+ L G CT   P+ +V+EYA  G+L + L+ 
Sbjct: 78  IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRA 109

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 53.9 bits (129), Expect = 7e-10
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 6   KIVGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FG VW G W  N  VAVK ++      ++F  E + + ++ H  +V+LY   +
Sbjct: 12  KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS 71

Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
             P+ +V EY   GSL + L+     +LK 
Sbjct: 72  EEPIYIVTEYMSKGSLLDFLKDGEGRALKL 101

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 53.5 bits (128), Expect = 9e-10
 Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 7/91 (7%)

Query: 8  VGQGAFGVVWKGLWQ--NQYVAVKHI-ET-EAERKA-FAVEVRQLSRVSHPNIVKLYGAC 62
          +G+G FG V+ G  +  N  VAVK   ET   + KA F  E R L + SHPNIV+L G C
Sbjct: 3  IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62

Query: 63 T-GNPVCLVMEYAEGGSLYNELQRSSAASLK 92
          T   P+ +VME  +GG     L R+    LK
Sbjct: 63 TQKQPIYIVMELVQGGDFLTFL-RTEGPRLK 92

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 53.2 bits (128), Expect = 9e-10
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 10/97 (10%)

Query: 7   IVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFA---VEVRQLSRVSH---PNIVKL 58
           ++G+GA+G V++G      + VA+K I  +      +    EV  LS++     PNI K 
Sbjct: 8   LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKY 67

Query: 59  YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFC 94
           YG+    P + ++MEYAEGGS+   L ++   + K+ 
Sbjct: 68  YGSYLKGPRLWIIMEYAEGGSV-RTLMKAGPIAEKYI 103

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 24/108 (22%)

Query: 6   KIVGQGAFGVVW-------------KGLWQNQYVAVKHIE-TEAERKAFAVEVRQLSRVS 51
           K +G G+FG V              K L + + V +K +E    E++        L  + 
Sbjct: 7   KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRI-------LQSIR 59

Query: 52  HPNIVKLYGA--CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
           HP +V LYG+     N + LVMEY  GG L++ L++S        + Y
Sbjct: 60  HPFLVNLYGSFQDDSN-LYLVMEYVPGGELFSHLRKSGRFPEPVARFY 106

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 53.0 bits (127), Expect = 1e-09
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 11/101 (10%)

Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIE--------TEAERKAFAVEVRQLSRVSHPNIV 56
           +++G+GA+G V+ GL  Q Q +AVK +E         E E +    EV  L  + H NIV
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSA-ASLKFCK 95
           +  G C   N + + ME+  GGS+ + L R        FCK
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCK 106

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 53.0 bits (127), Expect = 1e-09
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 6  KIVGQGAFGVVWKGLWQNQ-----YVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
          K++G G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI+ 
Sbjct: 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIH 69

Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQR 85
          L G  T   PV +V EY E GSL   L++
Sbjct: 70 LEGVVTKSKPVMIVTEYMENGSLDAFLRK 98

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 52.2 bits (125), Expect = 3e-09
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 26  VAVKHIETEAERKA---FAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSL 79
           VAVK +  +A + A   F  EV+ LSR+  PNI++L G C   +P+C++ EY E G L
Sbjct: 49  VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDL 106

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 52.0 bits (125), Expect = 3e-09
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 9/78 (11%)

Query: 7  IVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLYG 60
           +G+G +G+V++       + VA+K +  + ER    +    E+  L  + HPNIV+L  
Sbjct: 14 RIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKE 73

Query: 61 ACTGN---PVCLVMEYAE 75
             G     + LVMEY E
Sbjct: 74 VVVGKHLDSIFLVMEYCE 91

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 51.7 bits (124), Expect = 3e-09
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 6  KIVGQGAFG--VVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
          +++G+GAFG   +++    +  V  K +     +E ER+    E+  LS + HPNI+  Y
Sbjct: 6  RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYY 65

Query: 60 GACTGNPVCLV-MEYAEGGSLYNELQR 85
               +   L+ MEYA GG+LY+++ R
Sbjct: 66 NHFMDDNTLLIEMEYANGGTLYDKIVR 92

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 51.9 bits (125), Expect = 3e-09
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKLYGA-C 62
          +G G +G V+K   +   + VA+K I+ E   + +    E+  L    HPNIV  +G+  
Sbjct: 11 IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL 70

Query: 63 TGNPVCLVMEYAEGGSL---YNELQR 85
            + + +VMEY  GGSL   Y   + 
Sbjct: 71 RRDKLWIVMEYCGGGSLQDIYQVTRG 96

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 51.8 bits (124), Expect = 4e-09
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 4/64 (6%)

Query: 26  VAVKHIETEAERKA---FAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYN 81
           VAVK +  +A + A   F  E++ +SR+  PNI++L   C T +P+C++ EY E G L  
Sbjct: 49  VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQ 108

Query: 82  ELQR 85
            L R
Sbjct: 109 FLSR 112

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 51.5 bits (123), Expect = 5e-09
 Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 26  VAVKHIETEAERKA---FAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSL 79
           VAVK +  +  + A   F  E++ +SR+ +PNI++L G C + +P+C++ EY E G L
Sbjct: 47  VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDL 104

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 51.4 bits (123), Expect = 5e-09
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 9/83 (10%)

Query: 6  KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
          +++G G FG V +G  +       +VA+K ++   TE +R+ F  E   + +  HPNI+ 
Sbjct: 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIH 69

Query: 58 LYGACTGN-PVCLVMEYAEGGSL 79
          L G  T + PV ++ E+ E G+L
Sbjct: 70 LEGVVTKSRPVMIITEFMENGAL 92

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 51.6 bits (123), Expect = 5e-09
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 14  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 73

Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKF 93
           P+ +V EY   GSL + L+      L+ 
Sbjct: 74  PIYIVTEYMSKGSLLDFLKGEMGKYLRL 101

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 50.9 bits (122), Expect = 7e-09
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 13/103 (12%)

Query: 9   GQGAFGVVWKGLWQNQ---YVAVKHIETEAERK----------AFAVEVRQLSRVSHPNI 55
           GQG F  ++KG+ + Q    +     E     K          AF      +S++SH ++
Sbjct: 4   GQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHL 63

Query: 56  VKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           VKLYG C  +   +V EY + G L   L R         K+ +
Sbjct: 64  VKLYGVCVRDENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDV 106

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 51.0 bits (122), Expect = 8e-09
 Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 12/92 (13%)

Query: 6   KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
           K +G GAFG V +    GL+++     VAVK ++  A   ER+A   E++ LS + +H N
Sbjct: 41  KTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHIN 100

Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
           IV L GACT G P  ++ EY   G L N L+R
Sbjct: 101 IVNLLGACTVGGPTLVITEYCCYGDLLNFLRR 132

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 50.5 bits (121), Expect = 9e-09
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 10/90 (11%)

Query: 6  KIVGQGAFGVVWKG--LWQNQYVAVKHI-------ETEAERKAFAVEVRQLSRVSHPNIV 56
          +++G G+FG V++G  L    + AVK +         +   K    E+  LS++ HPNIV
Sbjct: 6  ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65

Query: 57 KLYG-ACTGNPVCLVMEYAEGGSLYNELQR 85
          +  G     + + + +E   GGSL   L++
Sbjct: 66 QYLGTEREEDNLYIFLELVPGGSLAKLLKK 95

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 50.6 bits (121), Expect = 1e-08
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 10/89 (11%)

Query: 6  KIVGQGAFGVVW--KGLWQNQYVAVKHI-------ETEAERKAFAVEVRQLSRVSHPNIV 56
          K++GQGAFG V+    +   + +AVK +       ET+ E  A   E++ L  + H  IV
Sbjct: 8  KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIV 67

Query: 57 KLYGACTGN-PVCLVMEYAEGGSLYNELQ 84
          + YG    +  + + MEY  GGS+ ++L+
Sbjct: 68 QYYGCLRDDETLSIFMEYMPGGSVKDQLK 96

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 9/90 (10%)

Query: 6  KIVGQGAFGVVWK--GLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
          + +G+G+FG V K       + +  K I+    TE E++    EV  L  + HPNIV+ Y
Sbjct: 6  ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65

Query: 60 GAC---TGNPVCLVMEYAEGGSLYNELQRS 86
                +   + +VMEY EGG L   +Q+ 
Sbjct: 66 DRIIDRSNQTLYIVMEYCEGGDLAQLIQKC 95

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC 62
          +G GA  VV+    L  N+ VA+K I+ E           EV+ +S+ +HPN+VK Y + 
Sbjct: 9  IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF 68

Query: 63 T-GNPVCLVMEYAEGGSLY 80
            G+ + LVM Y  GGSL 
Sbjct: 69 VVGDELWLVMPYLSGGSLL 87

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 12/82 (14%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV--------EVRQLSRVSHPNI 55
          K +G+G + VV+K   +   + VA+K I+   ERK            E++ L  + HPNI
Sbjct: 6  KKLGEGTYAVVYKARDKETGRIVAIKKIKLG-ERKEAKDGINFTALREIKLLQELKHPNI 64

Query: 56 VKLYGA-CTGNPVCLVMEYAEG 76
          + L       + + LV E+ E 
Sbjct: 65 IGLLDVFGHKSNINLVFEFMET 86

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 49.7 bits (118), Expect = 2e-08
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V LY   +  
Sbjct: 14  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEE 73

Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKF 93
           P+ +V E+   GSL + L+      LK 
Sbjct: 74  PIYIVTEFMGKGSLLDFLKEGDGKYLKL 101

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 49.8 bits (119), Expect = 2e-08
 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVKHIETEAERK---AFAVEVRQLSRVSHPNI 55
             +G+G FG V+    +          V VK ++   +      F  E+    ++SH N+
Sbjct: 11  TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNV 70

Query: 56  VKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           V+L G C    P  +++EY + G L   L+ + +   K
Sbjct: 71  VRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEK 108

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 49.4 bits (118), Expect = 2e-08
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 6/75 (8%)

Query: 8  VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLS---RVSHPNIVKLYGAC 62
          +G+G +  V+KG  +   + VA+K I  +AE    +  +R++S    + H NIV+L+   
Sbjct: 8  LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI 67

Query: 63 -TGNPVCLVMEYAEG 76
           T N + LV EY + 
Sbjct: 68 HTENKLMLVFEYMDK 82

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 14/80 (17%)

Query: 8  VGQGAFGVVWKGLWQ--NQYVAVKHI------ETEAERKAFAVEVRQLSRVS-HPNIVKL 58
          +G+GA+G+VWK + +   + VA+K I       T+A+R  F  E+  L  +  HPNIVKL
Sbjct: 15 LGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQR-TFR-EIMFLQELGDHPNIVKL 72

Query: 59 ---YGACTGNPVCLVMEYAE 75
               A     + LV EY E
Sbjct: 73 LNVIKAENDKDIYLVFEYME 92

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 49.4 bits (118), Expect = 3e-08
 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 8/85 (9%)

Query: 9  GQGAFGVVWKGLWQN--QYVAVKHIETEAERKA--FAVEVRQLSRVSHPNIVKLYGACTG 64
          G GAFG V+K   +    + A K I+ E+E +   F VE+  LS   HPNIV LY A   
Sbjct: 14 GDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY 73

Query: 65 NP-VCLVMEYAEGGSLYN---ELQR 85
             + +++E+ +GG+L +   EL+R
Sbjct: 74 ENKLWILIEFCDGGALDSIMLELER 98

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)

Query: 8  VGQGAFGVVWKGLWQ--NQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
          +G+G+FG V+K + +  NQ VA+K I   E E E +    E++ LS+   P I K YG+ 
Sbjct: 9  IGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSF 68

Query: 63 TGN-PVCLVMEYAEGGSLYNELQRS 86
               + ++MEY  GGS  + L+  
Sbjct: 69 LKGSKLWIIMEYCGGGSCLDLLKPG 93

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 8/87 (9%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    E+E   K    E++ L  ++HPNI+KL   
Sbjct: 7  IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDV 66

Query: 62 CT-GNPVCLVMEYAEGGSLYNELQRSS 87
                + LV E+ +   LY  ++   
Sbjct: 67 FRHKGDLYLVFEFMD-TDLYKLIKDRQ 92

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 15/84 (17%)

Query: 7  IVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV----EV---RQLSRVSHPNIVK 57
           +G+GA+G V+K   L   ++VA+K +      +   +    E+   +QL    HPNIV+
Sbjct: 6  EIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVR 65

Query: 58 LYGACTGN------PVCLVMEYAE 75
          L   C G        + LV E+ +
Sbjct: 66 LLDVCHGPRTDRELKLTLVFEHVD 89

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 49.0 bits (117), Expect = 4e-08
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 11/92 (11%)

Query: 6   KIVGQGAFGVVWKGLW-------QNQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNI 55
           + +G GAFG V++GL+           VAVK +    +E +   F +E   +S+ +H NI
Sbjct: 12  RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71

Query: 56  VKLYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
           V+L G      P  +++E   GG L + L+ +
Sbjct: 72  VRLIGVSFERLPRFILLELMAGGDLKSFLREN 103

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 48.8 bits (116), Expect = 4e-08
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 11/89 (12%)

Query: 8   VGQGAFGVVWKGLWQN-------QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKL 58
           +G+GAFG V+     N         VAVK ++  +E+ R+ F  E   L+ + H +IV+ 
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 59  YGACT-GNPVCLVMEYAEGGSLYNELQRS 86
           YG CT G P+ +V EY   G L N   RS
Sbjct: 73  YGVCTEGRPLLMVFEYMRHGDL-NRFLRS 100

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 48.9 bits (117), Expect = 4e-08
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 16/86 (18%)

Query: 5   SKIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKL 58
           +KI GQG FG V+K   +   Q VA+K +  E E++ F +    E++ L  + H N+V L
Sbjct: 18  AKI-GQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 76

Query: 59  YGACTGNP---------VCLVMEYAE 75
              C               LV E+ E
Sbjct: 77  IEICRTKATPYNRYKGSFYLVFEFCE 102

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 48.8 bits (116), Expect = 4e-08
 Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKAF-AVEVRQLS--RVSHPNIV 56
           K++G G FG V KG+W  +       VA+K I+  + R+ F  +    L+   + H  IV
Sbjct: 13  KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIV 72

Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQR 85
           +L G C G  + LV + +  GSL + +++
Sbjct: 73  RLLGICPGASLQLVTQLSPLGSLLDHVRQ 101

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 48.9 bits (116), Expect = 4e-08
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 12/100 (12%)

Query: 6   KIVGQGAFGVVWK----GLWQNQY---VAVKHIETEA---ERKAFAVEVRQLSRVS-HPN 54
           + +G GAFG V +    GL  +Q    VAVK +++ A   E++A   E++ +S +  H N
Sbjct: 43  RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLN 102

Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
           IV L GACT G P+ ++ EY   G L + L R+    L++
Sbjct: 103 IVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQY 142

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 48.8 bits (117), Expect = 5e-08
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 9/75 (12%)

Query: 10 QGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLYGACT 63
          +G +GVV++   +   + VA+K ++ E E++ F +    E+  L ++ HPNIV +     
Sbjct: 15 EGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVV 74

Query: 64 G---NPVCLVMEYAE 75
          G   + + +VMEY E
Sbjct: 75 GSNLDKIYMVMEYVE 89

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 48.3 bits (115), Expect = 5e-08
 Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK ++ +  E + F  E   +  + HPN+V+L G CT 
Sbjct: 14  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 73

Query: 65  N-PVCLVMEYAEGGSLYNELQRSSAASL 91
             P  ++ E+   G+L + L+  +   +
Sbjct: 74  EPPFYIITEFMTYGNLLDYLRECNRQEV 101

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 48.1 bits (115), Expect = 7e-08
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 18/92 (19%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKH---------IETEAERKAFAVEVRQLSRVSHPNIV 56
          +G+GA G+V+K       + VA+K          I  +A R     E++ L    HP +V
Sbjct: 8  IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALR-----EIKALQACQHPYVV 62

Query: 57 KLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
          KL      G+   LVMEY     L   L+   
Sbjct: 63 KLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEE 93

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 48.5 bits (115), Expect = 7e-08
 Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 11/89 (12%)

Query: 8   VGQGAFGVVWKGLWQN-------QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKL 58
           +G+GAFG V+     N         VAVK ++  T A RK F  E   L+ + H +IVK 
Sbjct: 13  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 72

Query: 59  YGACT-GNPVCLVMEYAEGGSLYNELQRS 86
           YG C  G+P+ +V EY + G L N+  R+
Sbjct: 73  YGVCGDGDPLIMVFEYMKHGDL-NKFLRA 100

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 48.0 bits (115), Expect = 8e-08
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 14/91 (15%)

Query: 6  KIVGQGAFGVVW----KGLWQNQYVAVKHIETEA--ERK----AFAVEVRQLSRVSHPNI 55
          K++G+G  G V+    KG    +  A+K ++ +   +R         E   L+ + HP +
Sbjct: 7  KLLGKGDVGRVFLVRLKG--TGKLFALKVLDKKEMIKRNKVKRVLT-EQEILATLDHPFL 63

Query: 56 VKLYGAC-TGNPVCLVMEYAEGGSLYNELQR 85
            LY +  T   +CLVM+Y  GG L+  LQR
Sbjct: 64 PTLYASFQTETYLCLVMDYCPGGELFRLLQR 94

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 47.7 bits (114), Expect = 9e-08
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 11/87 (12%)

Query: 8   VGQGAFGVVWKGLWQN-------QYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVK 57
           +GQG+FG+V++GL +          VA+K +    +  ER  F  E   +   +  ++V+
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNEL 83
           L G   TG P  +VME    G L + L
Sbjct: 74  LLGVVSTGQPTLVVMELMAKGDLKSYL 100

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 47.2 bits (112), Expect = 2e-07
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 13/92 (14%)

Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVS-HPN 54
           K +G+GAFG V +    G+ ++   + VAVK ++   T +E KA   E++ L  +  H N
Sbjct: 13  KPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLN 72

Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++EY + G+L N L+
Sbjct: 73  VVNLLGACTKPGGPLMVIVEYCKFGNLSNYLR 104

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 46.7 bits (111), Expect = 2e-07
 Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 7/84 (8%)

Query: 8  VGQGAFGVVWKGLWQN--QYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G+FGVV+K + +   +  A+K I+       ER+    E R L+++    I++ Y +
Sbjct: 8  IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYES 67

Query: 62 -CTGNPVCLVMEYAEGGSLYNELQ 84
                + +VMEYAE G L+  L+
Sbjct: 68 FLDKGKLNIVMEYAENGDLHKLLK 91

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 46.5 bits (110), Expect = 3e-07
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)

Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT-- 63
          + +G+G FG V  G ++   VAVK I+ +A  +AF  E   ++++ H N+V+L G     
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71

Query: 64 GNPVCLVMEYAEGGSLYNELQRSSAASL 91
             + +V EY   GSL + L RS   S+
Sbjct: 72 KGGLYIVTEYMAKGSLVDYL-RSRGRSV 98

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 18/88 (20%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV--------EVRQLSRV-SHPN 54
          K +G G FG V+    +   + VA+K +     +K F          EV+ L ++  HPN
Sbjct: 5  KQLGDGTFGSVYLARNKETGELVAIKKM-----KKKFYSWEECMNLREVKSLRKLNEHPN 59

Query: 55 IVKLYGACTGN-PVCLVMEYAEGGSLYN 81
          IVKL      N  +  V EY E G+LY 
Sbjct: 60 IVKLKEVFRENDELYFVFEYME-GNLYQ 86

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 46.5 bits (110), Expect = 3e-07
 Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 9/83 (10%)

Query: 6  KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
          K++G G FG V++G+ +        VA+K ++   TE +R+ F  E   + + SH NI++
Sbjct: 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIR 70

Query: 58 LYGACTG-NPVCLVMEYAEGGSL 79
          L G  T   P  ++ EY E G+L
Sbjct: 71 LEGVVTKFKPAMIITEYMENGAL 93

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 46.2 bits (109), Expect = 4e-07
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 12/93 (12%)

Query: 6   KIVGQGAFGVVWKG----LWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
           +I+G GAFG V +G    L ++Q    VAVK ++  A   E++A   E++ ++ +  H N
Sbjct: 43  RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLN 102

Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRS 86
           IV L GACT   P+ ++ EY   G L N L ++
Sbjct: 103 IVNLLGACTKSGPIYIITEYCFYGDLVNYLHKN 135

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 46.2 bits (109), Expect = 4e-07
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 11/89 (12%)

Query: 8   VGQGAFGVVWKGLWQNQ-------YVAVKHIETEAE--RKAFAVEVRQLSRVSHPNIVKL 58
           +G+GAFG V+     N         VAVK ++  ++  RK F  E   L+ + H +IVK 
Sbjct: 13  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72

Query: 59  YGACT-GNPVCLVMEYAEGGSLYNELQRS 86
           YG C  G+P+ +V EY + G L N+  R+
Sbjct: 73  YGVCVEGDPLIMVFEYMKHGDL-NKFLRA 100

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 45.8 bits (108), Expect = 5e-07
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 6/83 (7%)

Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYGA- 61
          +G+G+FG V+KG+     Q VA+K I   E E E +    E+  LS+   P + K YG+ 
Sbjct: 12 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 71

Query: 62 CTGNPVCLVMEYAEGGSLYNELQ 84
            G  + ++MEY  GGS  + L+
Sbjct: 72 LKGTKLWIIMEYLGGGSALDLLR 94

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 45.0 bits (106), Expect = 8e-07
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 11/94 (11%)

Query: 8   VGQGAFGVVWKGLW-------QNQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVK 57
           +G+  FG V+KG         Q Q VA+K ++ +AE   R+ F  E    SR+ HPNIV 
Sbjct: 13  LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVC 72

Query: 58  LYGACTGN-PVCLVMEYAEGGSLYNELQRSSAAS 90
           L G  T   P+ ++  Y     L+  L   S  S
Sbjct: 73  LLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHS 106

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 45.1 bits (106), Expect = 9e-07
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)

Query: 6  KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
          K++G GAFG V+KG+W  +       VA+K +      KA   F  E   ++ + HP++V
Sbjct: 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 72

Query: 57 KLYGACTGNPVCLVMEYAEGGSL 79
          +L G C    + LV +    G L
Sbjct: 73 RLLGVCLSPTIQLVTQLMPHGCL 95

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 45.0 bits (106), Expect = 9e-07
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 8  VGQGAFGVVWKGLWQ----NQYVAVKHIETEAERKAFAVEVRQLSRV----SHPNIVKLY 59
          +G G FG V KG+++     + VAVK ++ +    A   E+ + + V     +P IV++ 
Sbjct: 3  LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62

Query: 60 GACTGNPVCLVMEYAEGGSLYNELQRS 86
          G C      LVME AE G L   LQ++
Sbjct: 63 GICEAESWMLVMELAELGPLNKFLQKN 89

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 10/86 (11%)

Query: 8  VGQGAFGVVW---KGLWQNQYVAVKHI-ETEAERKAFAVEVRQ----LSRVSHPNIVKLY 59
          + +GA+G V+   K        A+K I + +  RK    +V      LS+   P +VKLY
Sbjct: 1  ISKGAYGRVFLAKKKS-TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLY 59

Query: 60 GACTG-NPVCLVMEYAEGGSLYNELQ 84
           +  G   + LVMEY  GG L + L+
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDLASLLE 85

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 6  KIVGQGAFGVVWKG--LWQNQYVAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVKL 58
          K +G+G F VV+K   L   + VA+K ++         R+    E+  L ++ HPN++K 
Sbjct: 8  KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKY 67

Query: 59 YGA-CTGNPVCLVMEYAEGGSL 79
            +    N + +V+E A+ G L
Sbjct: 68 LASFIENNELNIVLELADAGDL 89

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 44.3 bits (104), Expect = 2e-06
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 14/105 (13%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVKHI-------ETEAERKAFAVEVRQLSRVSHPNIV 56
           K++GQGAFG V+        + +AVK +       ET  E  A   E++ L  + H  IV
Sbjct: 8   KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIV 67

Query: 57  KLYGACTGNP----VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
           + YG C  +P    + + ME+  GGS+ ++L+   A +    + Y
Sbjct: 68  QYYG-CLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKY 111

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 6/83 (7%)

Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYGA- 61
          +G+G+FG V+KG+     + VA+K I   E E E +    E+  LS+   P I + YG+ 
Sbjct: 12 IGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY 71

Query: 62 CTGNPVCLVMEYAEGGSLYNELQ 84
            G  + ++MEY  GGS  + L+
Sbjct: 72 LKGTKLWIIMEYLGGGSALDLLK 94

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FG VW G + N   VAVK ++      +AF  E   +  + H  +V+LY   T
Sbjct: 12  KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 71

Query: 64  GN-PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
              P+ ++ EY   GSL + L+      +   K+
Sbjct: 72  KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL 105

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 8/62 (12%)

Query: 5  SKI--VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAF---AV-EVRQLSRVSHPNIV 56
          +KI  +G+G +GVV+KG      Q VA+K I  E+E +     A+ E+  L  + HPNIV
Sbjct: 3  TKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIV 62

Query: 57 KL 58
           L
Sbjct: 63 CL 64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 43.8 bits (103), Expect = 2e-06
 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 14/103 (13%)

Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+G FG V      GL + +      VAVK ++++A  K  +  + ++  +     H
Sbjct: 24  KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 83

Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKFC 94
            NI+ L GACT + P+ +++EYA  G+L   L+      +++C
Sbjct: 84  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYC 126

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 43.8 bits (103), Expect = 3e-06
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 10/93 (10%)

Query: 8   VGQGAFGVVWKG------LWQNQYVAVK---HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           +G+ AFG ++KG      +   Q VA+K    I    +   F  E   ++ + HPNIV L
Sbjct: 13  LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCL 72

Query: 59  YGACTG-NPVCLVMEYAEGGSLYNELQRSSAAS 90
            G  T   PVC++ EY   G L+  L   S  S
Sbjct: 73  LGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHS 105

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 43.5 bits (102), Expect = 3e-06
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 11/98 (11%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE-TEAERKAFAVEVRQLSRVS-HPNIVKLYGA 61
           ++VG G +G V+KG  +   Q  A+K ++ TE E +   +E+  L + S H NI   YGA
Sbjct: 22  EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGA 81

Query: 62  CT-------GNPVCLVMEYAEGGSLYNELQRSSAASLK 92
                     + + LVME+   GS+ + ++ +   +LK
Sbjct: 82  FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALK 119

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 43.5 bits (102), Expect = 4e-06
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)

Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ K     +Y A+K ++ E      E      E R L    HP +  L
Sbjct: 1   KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 60

Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    S    + Y
Sbjct: 61  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 100

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 14/64 (21%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHIE------TEAERKAFAV--EVRQLSRVSHPNI 55
          K +G GA+GVV   + +   + VA+K I        +A+R    +  E++ L  + H NI
Sbjct: 6  KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKR----ILREIKLLRHLRHENI 61

Query: 56 VKLY 59
          + L 
Sbjct: 62 IGLL 65

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 43.1 bits (101), Expect = 4e-06
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)

Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ +     +Y A+K +  E      E      E R L    HP +  L
Sbjct: 1   KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 60

Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    + +  + Y
Sbjct: 61  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 100

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 42.8 bits (101), Expect = 5e-06
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 6   KIVGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V    +  L  N  + VAVK ++  T    + F  E+  L  + H NIVK
Sbjct: 10  QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVK 69

Query: 58  LYGACTG---NPVCLVMEYAEGGSLYNELQR 85
             G C       + LVMEY   GSL + LQ+
Sbjct: 70  YKGVCYSAGRRNLRLVMEYLPYGSLRDYLQK 100

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 42.8 bits (100), Expect = 5e-06
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 8/100 (8%)

Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ +     +Y A+K ++ E      E      E R L    HP +  L
Sbjct: 1   KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSL 60

Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEY  GG L+  L R    S    + Y
Sbjct: 61  KYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFY 100

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 42.7 bits (100), Expect = 6e-06
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 8/87 (9%)

Query: 6  KIVGQGAFG---VVWKGLWQNQYVAVK---HIETEAERKAFAVEVRQLSRVSHPNIVKLY 59
          ++VG+G++G   +V       QYV  K      +  ERKA   E + LS++ HPNIV   
Sbjct: 6  RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYR 65

Query: 60 GACTGNPVCL--VMEYAEGGSLYNELQ 84
           +  G    L  VM + EGG LY++L+
Sbjct: 66 ESWEGEDGLLYIVMGFCEGGDLYHKLK 92

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 42.5 bits (100), Expect = 6e-06
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 6/91 (6%)

Query: 7   IVGQGAFGVVWKGL-WQNQY-VAVKHIETEAER--KAFAVEVRQLSRVSHPNIVKLYGAC 62
           ++G+G +G+V+       Q  +A+K I     R  +    E+   S + H NIV+  G+ 
Sbjct: 15  VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD 74

Query: 63  T-GNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           +      + ME   GGSL + L RS    LK
Sbjct: 75  SENGFFKIFMEQVPGGSL-SALLRSKWGPLK 104

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 42.7 bits (101), Expect = 7e-06
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 7/73 (9%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAF---AV-EVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I  E E +     A+ E+  L  ++HPNIV+L   
Sbjct: 7  IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDV 66

Query: 62 C-TGNPVCLVMEY 73
            + N + LV E+
Sbjct: 67 VHSENKLYLVFEF 79

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 42.7 bits (100), Expect = 7e-06
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)

Query: 6  KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
          K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 72

Query: 57 KLYGACTGNPVCLVMEYAEGGSL 79
          +L G C  + V L+ +    G L
Sbjct: 73 RLLGICLTSTVQLITQLMPFGCL 95

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 42.2 bits (99), Expect = 7e-06
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)

Query: 8  VGQGAFGVVWKGLWQNQY----VAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
          +G G FG V KG+++ +     VA+K ++ E E   R     E   + ++ +P IV++ G
Sbjct: 3  LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIG 62

Query: 61 ACTGNPVCLVMEYAEGGSL 79
           C    + LVME A GG L
Sbjct: 63 VCEAEALMLVMEMASGGPL 81

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 42.3 bits (99), Expect = 8e-06
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 13/92 (14%)

Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRV-SHPN 54
           K++G GAFG V +    G+ +      VAVK ++   T +E KA   E++ L  + +H N
Sbjct: 13  KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLN 72

Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT    P+ +++E+ + G+L N L+
Sbjct: 73  VVNLLGACTKPNGPLMVIVEFCKYGNLSNFLR 104

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 42.3 bits (99), Expect = 8e-06
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 13/92 (14%)

Query: 6   KIVGQGAFGVVWKG-------LWQNQYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +            + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 13  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 72

Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L N L+
Sbjct: 73  VVNLLGACTKPGGPLMVIVEFCKFGNLSNYLR 104

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 42.3 bits (99), Expect = 8e-06
 Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 9/79 (11%)

Query: 8  VGQGAFGVVWKGLWQNQ----YVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G GAFG V+K   +N+      A K IET  E E + + VE+  L+  +HP IVKL GA
Sbjct: 20 LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGA 77

Query: 62 CT-GNPVCLVMEYAEGGSL 79
                + +++E+  GG++
Sbjct: 78 FYWDGKLWIMIEFCPGGAV 96

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 42.3 bits (99), Expect = 9e-06
 Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 9/79 (11%)

Query: 8  VGQGAFGVVWKGLWQNQ----YVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G GAFG V+K   QN+      A K I+T  E E + + VE+  L+   HPNIVKL  A
Sbjct: 13 LGDGAFGKVYKA--QNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 70

Query: 62 C-TGNPVCLVMEYAEGGSL 79
              N + +++E+  GG++
Sbjct: 71 FYYENNLWILIEFCAGGAV 89

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 6  KIVGQGAFGVVW--KGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
          K++G+G FG V   +     +Y A+K ++ E      E      E R L    HP +  L
Sbjct: 1  KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTAL 60

Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQR 85
           Y   T + +C VMEYA GG L+  L R
Sbjct: 61 KYSFQTHDRLCFVMEYANGGELFFHLSR 88

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|225023 COG2112, COG2112, Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 2  LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNI---VKL 58
          L   K + +G   VV+ G W+   VA+K    ++ R+    E + L  ++   +   V  
Sbjct: 24 LRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYF 83

Query: 59 YGACTGNPVCLVMEYAEGGSL 79
          YG        + MEY +G  L
Sbjct: 84 YGE-----DFIRMEYIDGRPL 99

Length = 201

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 41.8 bits (98), Expect = 1e-05
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 6  KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
          +I+G G FG + +G  +        VA+  +    ++ +R+ F  E   L +  H NIV+
Sbjct: 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVR 70

Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQR 85
          L G  T GN + +V EY   G+L + L++
Sbjct: 71 LEGVITRGNTMMIVTEYMSNGALDSFLRK 99

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 41.6 bits (97), Expect = 1e-05
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 6/83 (7%)

Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYGA- 61
          +G+G+FG V+KG+     + VA+K I   E E E +    E+  LS+   P + K YG+ 
Sbjct: 12 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 71

Query: 62 CTGNPVCLVMEYAEGGSLYNELQ 84
               + ++MEY  GGS  + L+
Sbjct: 72 LKDTKLWIIMEYLGGGSALDLLE 94

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 41.8 bits (98), Expect = 1e-05
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 8/86 (9%)

Query: 8  VGQGAFGVVWKG----LWQNQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYG 60
          +G G FG V  G          V VK +   A   E+  F  EV+    ++HPN+++  G
Sbjct: 3  IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62

Query: 61 ACT-GNPVCLVMEYAEGGSLYNELQR 85
           C    P  LV+E+   G L N L+ 
Sbjct: 63 QCIESIPYLLVLEFCPLGDLKNYLRS 88

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 8/57 (14%)

Query: 9  GQGAFGVVWKGLWQN---QYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKL 58
          G+G FG V+K   Q    + VA+K I    E+  F +    E++ L ++ HPN+V L
Sbjct: 17 GEGTFGEVYKAR-QIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPL 72

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 20/110 (18%)

Query: 6   KIVGQGAFGVVWKG-LWQNQY---VAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVK 57
           K +G+G FG V +G L Q+     VAVK ++    T +E + F  E   +    HPN+++
Sbjct: 5   KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMR 64

Query: 58  LYGACTGN--------PVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLP 99
           L G C           PV +++ + + G L++ L  S    L  C  YLP
Sbjct: 65  LIGVCLQTVESEGYPSPV-VILPFMKHGDLHSFLLYS---RLGDCPQYLP 110

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 27/98 (27%)

Query: 7  IVGQGAFGVV----WKGLWQNQYVAVKHIETEAERKAFAV---EVRQL----------SR 49
          ++G+G FG V    +K     +  A+K     A +K   +   EV  L          + 
Sbjct: 6  VLGRGHFGKVLLAEYKK--TGELYAIK-----ALKKGDIIARDEVESLMCEKRIFETANS 58

Query: 50 VSHPNIVKLYGAC--TGNPVCLVMEYAEGGSLYNELQR 85
            HP +V L+ AC  T + VC VMEYA GG L   +  
Sbjct: 59 ERHPFLVNLF-ACFQTEDHVCFVMEYAAGGDLMMHIHT 95

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 12/93 (12%)

Query: 8   VGQGAFGVVW------KGLWQNQYVAVKHIETEAERKAFA---VEVRQLSRVSHPNIVKL 58
           +G+G FG V       +G    + VAVK ++ E+     A    E+  L  + H NIVK 
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 59  YGACT---GNPVCLVMEYAEGGSLYNELQRSSA 88
            G CT   GN + L+ME+   GSL   L R+  
Sbjct: 72  KGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKN 104

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 9/89 (10%)

Query: 7  IVGQGAFGVVWK------GLWQNQYVA-VKHIETEAERKAFAVEVRQLSRVSH-PNIVKL 58
          ++G+G FG V K      GL  +  +  +K   ++ + + FA E+  L ++ H PNI+ L
Sbjct: 2  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 61

Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRS 86
           GAC     + L +EYA  G+L + L++S
Sbjct: 62 LGACEHRGYLYLAIEYAPHGNLLDFLRKS 90

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 40.9 bits (96), Expect = 3e-05
 Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 6/58 (10%)

Query: 7  IVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKL 58
           +G+G +G V+K   +   + VA+K +  + E++ F +    E++ L +++H NIV L
Sbjct: 14 QIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNL 71

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 41.0 bits (96), Expect = 3e-05
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)

Query: 6  KIVGQGAFG---VVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKL 58
          K +G+G+FG   +V       QYV +K I     +  ER+    EV  LS + HPNIV+ 
Sbjct: 6  KKIGEGSFGKAILVKSKEDGKQYV-IKEINISKMSPKEREESRKEVAVLSNMKHPNIVQ- 63

Query: 59 YGACTGNPVCL--VMEYAEGGSLYNEL 83
          Y         L  VM+Y EGG LY ++
Sbjct: 64 YQESFEENGNLYIVMDYCEGGDLYKKI 90

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 7/72 (9%)

Query: 8  VGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSH-PNIVKLYGA 61
          +G+GAFG V K L +     +AVK I +   E E+K   +++  + R S  P IVK YGA
Sbjct: 12 IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGA 71

Query: 62 CTGNPVCLV-ME 72
                C + ME
Sbjct: 72 LFREGDCWICME 83

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 41.0 bits (96), Expect = 3e-05
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 6/78 (7%)

Query: 8  VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFA---VEVRQLSRVSHPNIVKLYGAC 62
          +G+G +G V+K L +     +A+K I  E +   F    +E+  L +   P IV  YGA 
Sbjct: 9  LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF 68

Query: 63 T-GNPVCLVMEYAEGGSL 79
               V + MEY + GSL
Sbjct: 69 FIEGAVYMCMEYMDAGSL 86

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 41.0 bits (96), Expect = 3e-05
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 14/87 (16%)

Query: 7  IVGQGAFGVVWKGL--WQNQYVAVKHIETEA------ERK-----AFAVEVRQLSRVSHP 53
          ++G G+FG V+ G+     + +AVK +E  +      +RK     A A E+  L  + H 
Sbjct: 7  LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66

Query: 54 NIVKLYGA-CTGNPVCLVMEYAEGGSL 79
          NIV+  G+    + + + +EY  GGS+
Sbjct: 67 NIVQYLGSSLDADHLNIFLEYVPGGSV 93

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 9/89 (10%)

Query: 7  IVGQGAFGVVWK------GLWQNQYVA-VKHIETEAERKAFAVEVRQLSRVS-HPNIVKL 58
          ++G+G FG V +      GL  N  +  +K   +E + + FA E+  L ++  HPNI+ L
Sbjct: 9  VIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINL 68

Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRS 86
           GAC     + + +EYA  G+L + L++S
Sbjct: 69 LGACENRGYLYIAIEYAPYGNLLDFLRKS 97

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FG VW   + ++  VAVK ++      +AF  E   +  + H  +VKL+   T
Sbjct: 12  KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 71

Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
             P+ ++ E+   GSL + L+    +     K+
Sbjct: 72  KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 104

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 7  IVGQGAFGVVWK-GLWQNQYV-AVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           +G+GA G V K  L     + A+K I        +K    E+        P IVK YGA
Sbjct: 8  RLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGA 67

Query: 62 CTGNPVC---LVMEYAEGGSL 79
                    + MEY EGGSL
Sbjct: 68 FLDESSSSIGIAMEYCEGGSL 88

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 40.4 bits (94), Expect = 4e-05
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 10/66 (15%)

Query: 8  VGQGAFGVVWKGL-WQN--QYVAVKHIETEAERKAFAVE-------VRQLSRVSHPNIVK 57
          +G+GA+G V+K    +N  ++VA+K +  +   +   +        +R L    HPN+V+
Sbjct: 9  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 68

Query: 58 LYGACT 63
          L+  CT
Sbjct: 69 LFDVCT 74

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 40.1 bits (94), Expect = 4e-05
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 5/77 (6%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVK--HIETEAERKAFAVEVRQLSRVSHPNIVKLYGA-C 62
           +G+G+ G+V         + VAVK   +  +  R+    EV  +    HPNIV++Y +  
Sbjct: 27  IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL 86

Query: 63  TGNPVCLVMEYAEGGSL 79
            G+ + +VME+ EGG+L
Sbjct: 87  VGDELWVVMEFLEGGAL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 40.0 bits (94), Expect = 5e-05
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 17/92 (18%)

Query: 5  SKIVGQGAFGVVWK------GLWQNQYVAVKH-IETEAE---RKAFAVEVRQLSRVSHPN 54
          SKI G+G++GVV+K      G    Q VA+K  +E+E +   +K    E+R L ++ HPN
Sbjct: 7  SKI-GEGSYGVVFKCRNRETG----QIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPN 61

Query: 55 IVKLYGACTGN-PVCLVMEYAEGGSLYNELQR 85
          +V L         + LV EY +  ++ NEL++
Sbjct: 62 LVNLIEVFRRKRKLHLVFEYCD-HTVLNELEK 92

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 40.0 bits (93), Expect = 6e-05
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 9/89 (10%)

Query: 7   IVGQGAFGVVWK------GLWQNQYVA-VKHIETEAERKAFAVEVRQLSRVS-HPNIVKL 58
           ++G+G FG V K      GL  +  +  +K   ++ + + FA E+  L ++  HPNI+ L
Sbjct: 14  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 73

Query: 59  YGACTGNP-VCLVMEYAEGGSLYNELQRS 86
            GAC     + L +EYA  G+L + L++S
Sbjct: 74  LGACEHRGYLYLAIEYAPHGNLLDFLRKS 102

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 39.6 bits (93), Expect = 6e-05
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 13/99 (13%)

Query: 7   IVGQGAFGVVWK--GLWQNQYVAVK------HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           ++G+GAFG V         +  A+K       +E  + R     E R L  ++HP +V L
Sbjct: 7   VIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLN-ERRILQELNHPFLVNL 65

Query: 59  YGA-CTGNPVCLVMEYAEGGSLYNELQRS---SAASLKF 93
           + +      + LV++   GG L   L +    S   +KF
Sbjct: 66  WYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKF 104

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.6 bits (92), Expect = 8e-05
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 14/105 (13%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVKHI-------ETEAERKAFAVEVRQLSRVSHPNIV 56
           K++G+GAFG V+        + +AVK +       ET  E  A   E++ L  + H  IV
Sbjct: 8   KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIV 67

Query: 57  KLYGACTGNP----VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
           + YG C  +P    + + +EY  GGS+ ++L+   A +    + Y
Sbjct: 68  QYYG-CLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRY 111

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 8e-05
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 12/80 (15%)

Query: 8  VGQGAFGVVWKGLWQNQYV----AVKHIETEAERKA----FAV-EVRQLSRVSHPNIVKL 58
          +G+G +G V+K   +N       A+K  + + E+       A  E+  L  + H N+V L
Sbjct: 8  IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSL 67

Query: 59 YGACTGNP---VCLVMEYAE 75
                +    V L+ +YAE
Sbjct: 68 VEVFLEHADKSVYLLFDYAE 87

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 39.4 bits (92), Expect = 9e-05
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 15/89 (16%)

Query: 6  KIVGQGAFGVVWKGLWQN--QYVAVKHIE---TEAER---------KAFAVEVRQLSRVS 51
          +++G+G +G V+  L     + +AVK +E   T A R         KA   E+  L  + 
Sbjct: 7  ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD 66

Query: 52 HPNIVKLYGACTG-NPVCLVMEYAEGGSL 79
          H NIV+  G  T    + + +EY  GGS+
Sbjct: 67 HLNIVQYLGFETTEEYLSIFLEYVPGGSI 95

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 8  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 67

Query: 62 C-TGNPVCLVMEY 73
            T N + LV E+
Sbjct: 68 IHTENKLYLVFEF 80

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 9/66 (13%)

Query: 6  KIVGQGAFGVVWKG-LWQN----QYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIV 56
          KI+G+G FG V +G L Q+      VAVK ++    T +E + F  E   +    HPN++
Sbjct: 5  KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVM 64

Query: 57 KLYGAC 62
          KL G C
Sbjct: 65 KLIGVC 70

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 14/93 (15%)

Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+G FG V      G+ +++      VAVK ++ +A  K  +  V ++  +     H
Sbjct: 21  KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 80

Query: 53  PNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
            NI+ L GACT   P+ +++EYA  G+L   L+
Sbjct: 81  KNIINLLGACTQDGPLYVIVEYASKGNLREYLR 113

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 26/99 (26%)

Query: 6  KIVGQGAFGVVWK-----GLWQNQYVAVKHIE-------------TEAERKAFAVEVRQL 47
          K++G+G +G V++     G    +  A+K ++             T+AER         L
Sbjct: 2  KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNI-------L 54

Query: 48 SRVSHPNIVKL-YGACTGNPVCLVMEYAEGGSLYNELQR 85
            V HP IV L Y   TG  + L++EY  GG L+  L+R
Sbjct: 55 EAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLER 93

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 12/104 (11%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVKHI-------ETEAERKAFAVEVRQLSRVSHPNIV 56
           K++GQGAFG V+    +   + +A K +       ET  E  A   E++ L  + H  IV
Sbjct: 8   KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIV 67

Query: 57  KLYGACTGN---PVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
           + YG         + + MEY  GGS+ ++L+   A +    + Y
Sbjct: 68  QYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKY 111

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 11/98 (11%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE-TEAERKAFAVEVRQLSRVS-HPNIVKLYGA 61
           ++VG G +G V+KG  +   Q  A+K ++ T  E +    E+  L + S H NI   YGA
Sbjct: 12  ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 71

Query: 62  -CTGNP------VCLVMEYAEGGSLYNELQRSSAASLK 92
               NP      + LVME+   GS+ + ++ +   +LK
Sbjct: 72  FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 109

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVKLYGA-C 62
           +GQGA G V+    +   Q VA+K I  + + K   +  E+  +  + +PNIV    +  
Sbjct: 27  IGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL 86

Query: 63  TGNPVCLVMEYAEGGSL 79
            G+ + +VMEY  GGSL
Sbjct: 87  VGDELFVVMEYLAGGSL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 10/105 (9%)

Query: 8   VGQGAFGVVW-----KGLWQNQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKL 58
           +G+G+FG V+     K + + +   +K I        E      E + LS++ HP IVK 
Sbjct: 8   LGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKF 67

Query: 59  YGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWF 102
           + +       C++ EY EG  L  +L+          +  +  WF
Sbjct: 68  HASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWF 112

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 12/87 (13%)

Query: 6  KIVGQGAFGVVWKGLW-----QNQYVAVK---HIETEAERKAFAVEVRQLSRVSHPNIVK 57
          +++G+G FG V+ G       Q  + AVK    I    E + F  E   +   SHPN++ 
Sbjct: 1  RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60

Query: 58 LYGAC---TGNPVCLVMEYAEGGSLYN 81
          L G C    G+P+ +V+ Y + G L N
Sbjct: 61 LLGICLPSEGSPL-VVLPYMKHGDLRN 86

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 38.2 bits (88), Expect = 2e-04
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 8   VGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVK-LYGAC 62
           +GQGA G V+  +     Q VA+K +  + + K   +  E+  +    +PNIV  L    
Sbjct: 27  IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 86

Query: 63  TGNPVCLVMEYAEGGSL 79
            G+ + +VMEY  GGSL
Sbjct: 87  VGDELWVVMEYLAGGSL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 18/109 (16%)

Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+G FG V      G+ +++      VAVK ++ +A  K  +  V ++  +     H
Sbjct: 18  KPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKH 77

Query: 53  PNIVKLYGACT-GNPVCLVMEYAEGGSL--YNELQRSSAASLKF--CKI 96
            NI+ L GACT   P+ +++EYA  G+L  Y   +R       F  CK+
Sbjct: 78  KNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKL 126

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 10/103 (9%)

Query: 6   KIVGQGAFGVVW-----KGLWQNQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIV 56
           K++GQG+FG V+      G    Q  A+K ++       +R    +E   L+ V+HP IV
Sbjct: 2   KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIV 61

Query: 57  KL-YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           KL Y   T   + L++++  GG L+  L +    + +  K YL
Sbjct: 62  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 104

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 27/99 (27%)

Query: 6  KIVGQGAFGVV----WKGLWQNQYVAVKHIE------------TEAERKAFAVEVRQLSR 49
          K++G+G+FG V     KG   ++  AVK ++            T  E++  A+  +    
Sbjct: 1  KVLGKGSFGKVLLAELKG--TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGK---- 54

Query: 50 VSHPNIVKLYGAC--TGNPVCLVMEYAEGGSLYNELQRS 86
            HP + +L+ +C  T + +  VMEY  GG L   +QRS
Sbjct: 55 --HPFLTQLH-SCFQTKDRLFFVMEYVNGGDLMFHIQRS 90

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)

Query: 6  KIVGQGAFGVVWKGLWQNQ--YVAVKHIETEA------ERKAFAVEVRQLSRVSHPNIVK 57
          K++G+G+FG V     + +  + AVK ++ +A      E+   +     L  V HP +V 
Sbjct: 1  KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60

Query: 58 L-YGACTGNPVCLVMEYAEGGSLYNELQR 85
          L +   T + +  V++Y  GG L+  LQR
Sbjct: 61 LHFSFQTADKLYFVLDYINGGELFYHLQR 89

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 15/104 (14%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVKHI--------ETEAERKAFAVEVRQLSRVSHPNI 55
           + +G GAF   +  + +     +AVK +        E E   +A   E+R ++R++HP+I
Sbjct: 6   QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI 65

Query: 56  VKLYGA-CTGNPVCLVMEYAEGGSLYNELQR----SSAASLKFC 94
           +++ GA C  +   L +E+  GGS+ + L +      A  + + 
Sbjct: 66  IRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYT 109

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 13/81 (16%)

Query: 7  IVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY- 59
           +G+GA+G+V     +     VA+K I    E + F      E++ L R  H NI+ +  
Sbjct: 12 YIGEGAYGMVCSATHKPTGVKVAIKKISP-FEHQTFCQRTLREIKILRRFKHENIIGILD 70

Query: 60 -----GACTGNPVCLVMEYAE 75
                  + N V +V E  E
Sbjct: 71 IIRPPSFESFNDVYIVQELME 91

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 37.9 bits (88), Expect = 4e-04
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 43  EVRQLSRVSHPNIVKLYGACTGNPVC-LVMEYAEGGSL 79
           E+  + ++ HPNIVKL G C       L+ EY EG +L
Sbjct: 733 EIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNL 770

Length = 968

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 37.6 bits (87), Expect = 4e-04
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 8   VGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVK-LYGAC 62
           +GQGA G V+  +     Q VA+K +  + + K   +  E+  +    HPNIV  L    
Sbjct: 27  IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL 86

Query: 63  TGNPVCLVMEYAEGGSL 79
            G+ + +VMEY  GGSL
Sbjct: 87  VGDELWVVMEYLAGGSL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 37.8 bits (88), Expect = 4e-04
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKL 58
          +++G+G  G V+       ++ VA+K I     E    +K F  E +  + + HP IV +
Sbjct: 8  RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPV 67

Query: 59 YGACT-GNPVCLVMEYAEGGSL 79
          Y  C+ G+PV   M Y EG +L
Sbjct: 68 YSICSDGDPVYYTMPYIEGYTL 89

Length = 932

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 37.6 bits (87), Expect = 4e-04
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 14/88 (15%)

Query: 6   KIVGQGAFGVVWK----GL---WQNQ--YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+G FG V +    G+     +Q   VAVK ++  A  K  A  + ++  +     H
Sbjct: 18  KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKH 77

Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSL 79
            NI+ L G CT   P+ +++EYA  G+L
Sbjct: 78  KNIINLLGVCTQEGPLYVIVEYAAKGNL 105

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 37.5 bits (87), Expect = 4e-04
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 7/68 (10%)

Query: 24 QYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKLY--GACTGNPVCLVMEYAEG 76
            VA+K       E E +R  F  E    +R+ HPNIV L   G      +  V EY  G
Sbjct: 4  HEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVPG 63

Query: 77 GSLYNELQ 84
           +L   L 
Sbjct: 64 RTLREVLA 71

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 37.2 bits (86), Expect = 4e-04
 Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 8/97 (8%)

Query: 6  KIVGQGAFGVVWKGLWQNQY----VAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKL 58
          K +G G FG V  G   + Y    V VK +   A   E+  F  E +    + H N+++ 
Sbjct: 1  KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQC 60

Query: 59 YGACTG-NPVCLVMEYAEGGSLYNELQRSSAASLKFC 94
           G CT   P  LVME+   G L   L+    A L   
Sbjct: 61 LGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTP 97

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 37.2 bits (86), Expect = 5e-04
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 15/83 (18%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAVE-------VRQLSRVSHPNIVKL 58
          +G GA+G V+K        +VA+K +  +       +        +++L    HPNIV+L
Sbjct: 8  IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRL 67

Query: 59 YGACTG------NPVCLVMEYAE 75
             C          V LV E+ +
Sbjct: 68 MDVCATSRTDRETKVTLVFEHVD 90

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 36.9 bits (85), Expect = 7e-04
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 9/88 (10%)

Query: 6   KIVGQGAFGVVWKGLW----QNQY--VAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KG+W    +N    VA+K +      KA      E   ++ V  P + 
Sbjct: 13  KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVC 72

Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQ 84
           +L G C  + V LV +    G L + ++
Sbjct: 73  RLLGICLTSTVQLVTQLMPYGCLLDYVR 100

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 36.8 bits (85), Expect = 7e-04
 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 12/94 (12%)

Query: 6   KIVGQGAFGVVWKGLWQ------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIV 56
           +++G+G FG V    +        + VAVK ++ E        +  E+  L  + H NIV
Sbjct: 10  RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIV 69

Query: 57  KLYGACT---GNPVCLVMEYAEGGSLYNELQRSS 87
           K  G C+   G  + L+MEY   GSL + L +  
Sbjct: 70  KYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHK 103

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 36.9 bits (86), Expect = 7e-04
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 16/63 (25%)

Query: 7  IVGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV---------EVRQLSRVSHPNI 55
           +G GA+GVV   +     + VA+K I       AF V         E++ L    H NI
Sbjct: 12 NIGSGAYGVVCSAIDTRSGKKVAIKKIP-----HAFDVPTLAKRTLRELKILRHFKHDNI 66

Query: 56 VKL 58
          + +
Sbjct: 67 IAI 69

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 36.7 bits (85), Expect = 7e-04
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 7/73 (9%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAF-AVEVRQLS---RVSHPNIVKLYGA 61
          +G+G +GVV+K      N+ +A+K I  E E +   +  +R++S    + H NIV+L   
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69

Query: 62 CTGNP-VCLVMEY 73
                + LV EY
Sbjct: 70 VHSEKRLYLVFEY 82

Length = 294

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 36.7 bits (85), Expect = 8e-04
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
             +G GA G V+K + +   +  A+K I     +  R+    E+  L  V+HPN+VK + 
Sbjct: 80  NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHD 139

Query: 61  ACTGN-PVCLVMEYAEGGSL 79
               N  + +++E+ +GGSL
Sbjct: 140 MFDHNGEIQVLLEFMDGGSL 159

Length = 353

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 36.5 bits (84), Expect = 8e-04
 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 14/89 (15%)

Query: 6  KIVGQGAFG--VVWKGLWQNQYVAVKHI-------ETEAERKAFAVEVRQLSRVSHPNIV 56
          ++VG+G+FG  ++ + +  +Q  A+K I         E  RK    E   L+++ HPNIV
Sbjct: 6  RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRK----EAVLLAKMKHPNIV 61

Query: 57 KLYGACTGNP-VCLVMEYAEGGSLYNELQ 84
              +   +  + +VMEY +GG L  +++
Sbjct: 62 AFKESFEADGHLYIVMEYCDGGDLMQKIK 90

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 17/89 (19%)

Query: 8  VGQGAFGVVWKGLWQN---QYVAVKHI--------ETEAER-KAFAVEVRQLS----RVS 51
          +G GAFG V+K   +N     +A+K I        + + ER K+    V +++    ++ 
Sbjct: 8  LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67

Query: 52 HPNIVKLYGACT-GNPVCLVMEYAEGGSL 79
          HPNIV+ Y      + + +VM+  EG  L
Sbjct: 68 HPNIVRYYKTFLENDRLYIVMDLIEGAPL 96

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 32/112 (28%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAV------------EVRQ------- 46
           K++  GA+G V+          V+H ET   R+ FA+            +++Q       
Sbjct: 7   KLISNGAYGAVY---------LVRHKET---RQRFAMKKINKQNLILRNQIQQVFVERDI 54

Query: 47  LSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
           L+   +P +V ++ +  T   +C+VMEY EGG     L+   A  +   ++Y
Sbjct: 55  LTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMY 106

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 8   VGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVK-LYGAC 62
           +GQGA G V+  +     Q VA++ +  + + K   +  E+  +    +PNIV  L    
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87

Query: 63  TGNPVCLVMEYAEGGSL 79
            G+ + +VMEY  GGSL
Sbjct: 88  VGDELWVVMEYLAGGSL 104

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 9/89 (10%)

Query: 6  KIVGQGAFGVVW--KGLWQNQYVAVK-----HIETEAERKAFAVEVRQL-SRVSHPNIVK 57
          K++G+G+FG V   K     ++ AVK      I  + E+K    E   L   V HP +V 
Sbjct: 1  KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 58 L-YGACTGNPVCLVMEYAEGGSLYNELQR 85
          L Y   T + +  V++Y  GG L+  LQR
Sbjct: 61 LHYSFQTADKLYFVLDYVNGGELFFHLQR 89

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 35.9 bits (83), Expect = 0.001
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 10/78 (12%)

Query: 8  VGQGAFGVVW--KGLWQNQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
          +G G+FG V+  + +  N+ VA+K +     ++  + +    EVR L ++ HPN ++ Y 
Sbjct: 23 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIE-YK 81

Query: 61 AC--TGNPVCLVMEYAEG 76
           C    +   LVMEY  G
Sbjct: 82 GCYLREHTAWLVMEYCLG 99

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 35.7 bits (82), Expect = 0.001
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)

Query: 8   VGQGAFGVVWKGLWQN-------QYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVK 57
           +GQG+FG+V++G  ++         VAVK +   A   ER  F  E   +   +  ++V+
Sbjct: 14  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 73

Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQ 84
           L G  + G P  +VME    G L + L+
Sbjct: 74  LLGVVSKGQPTLVVMELMAHGDLKSYLR 101

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 22/88 (25%)

Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI--------ETEAERKAFAVEVRQLSRVSHPNIVK 57
           +G+G +G V+K L +      AVK +        E EAE       ++ LS   HPN+VK
Sbjct: 26  IGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNI----LKALS--DHPNVVK 79

Query: 58  LYG------ACTGNPVCLVMEYAEGGSL 79
            YG         G+ + LV+E   GGS+
Sbjct: 80  FYGMYYKKDVKNGDQLWLVLELCNGGSV 107

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 35.7 bits (83), Expect = 0.002
 Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 30/99 (30%)

Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHIETEA------ERKAFAVEVRQ----------LSR 49
          K++G+GAFG VW          V+  +T         RK+  ++  Q          L+ 
Sbjct: 7  KVIGRGAFGEVW---------LVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILAD 57

Query: 50 VSHPNIVKLYGACT---GNPVCLVMEYAEGGSLYNELQR 85
             P IVKLY   +      + LVMEY  GG L N L R
Sbjct: 58 ADSPWIVKLY--YSFQDEEHLYLVMEYMPGGDLMNLLIR 94

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 5/77 (6%)

Query: 8   VGQGAFGVVWKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGA-C 62
           +G+G+ G+V     ++  + VAVK ++   +  R+    EV  +    H N+V++Y +  
Sbjct: 28  IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87

Query: 63  TGNPVCLVMEYAEGGSL 79
            G+ + +VME+ EGG+L
Sbjct: 88  VGDELWVVMEFLEGGAL 104

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 6  KIVGQGAFGVVW--KGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSR-VSHPNIVK 57
          K++G+G+FG V   K      + AVK ++ +      E+     E   L + + HP +V 
Sbjct: 1  KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG 60

Query: 58 L-YGACTGNPVCLVMEYAEGGSLYNELQR 85
          L Y   T   +  V++Y  GG L+  LQR
Sbjct: 61 LHYSFQTAEKLYFVLDYVNGGELFFHLQR 89

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 6  KIVGQGAFGVVWKG--LWQNQYVAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVK- 57
          K +G+G F  V++   L   + VA+K ++         R+    E+  L +++HPN++K 
Sbjct: 8  KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKY 67

Query: 58 LYGACTGNPVCLVMEYAEGGSL 79
          L      N + +V+E A+ G L
Sbjct: 68 LDSFIEDNELNIVLELADAGDL 89

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 8   VGQGAFGVVW--KGLWQNQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
           +G G+FG V+  + +  ++ VA+K +     ++  + +    EVR L ++ HPN ++ Y 
Sbjct: 23  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ-YR 81

Query: 61  AC--TGNPVCLVMEYAEGGS 78
            C    +   LVMEY  G +
Sbjct: 82  GCYLREHTAWLVMEYCLGSA 101

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 35.5 bits (82), Expect = 0.002
 Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 19/107 (17%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRV-----------SH 52
           K + +GAFG V+  K      Y A+K +     +K+  +   Q++ V             
Sbjct: 2   KPISKGAFGSVYLAKKRSTGDYFAIKVL-----KKSDMIAKNQVTNVKAERAIMMIQGES 56

Query: 53  PNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           P + KLY +  + + + LVMEY  GG   + ++        + K Y+
Sbjct: 57  PYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYI 103

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 17/92 (18%)

Query: 6  KIVGQGAFGVVW----KGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNI 55
          K++G+G+FG V+    KG   NQ+ A+K ++ +      + +   VE R LS    HP +
Sbjct: 1  KMLGKGSFGKVFLAELKG--TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 58

Query: 56 VKLYGACT---GNPVCLVMEYAEGGSLYNELQ 84
            LY  CT      +  VMEY  GG L   +Q
Sbjct: 59 THLY--CTFQTKENLFFVMEYLNGGDLMFHIQ 88

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 7/75 (9%)

Query: 8  VGQGAFGVVWKGLWQN--QYVAVKHIETEAERK---AFAV-EVRQLSRVSHPNIVKLYGA 61
          +G+G +G V+K   +   + VA+K +  + + +   + A+ E+  L  + H NIV+LY  
Sbjct: 8  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV 67

Query: 62 CTGN-PVCLVMEYAE 75
             +  + LV EY +
Sbjct: 68 LHSDKKLTLVFEYCD 82

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 8/82 (9%)

Query: 6  KIVGQGAFGVVWKG--LWQNQYVAVKHIE----TEAERKAFAV-EVRQLSRVSHPNIVKL 58
          K +G+G F  V++   L     VA+K ++     +A+ +A  + E+  L +++HPN++K 
Sbjct: 8  KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY 67

Query: 59 YGA-CTGNPVCLVMEYAEGGSL 79
          Y +    N + +V+E A+ G L
Sbjct: 68 YASFIEDNELNIVLELADAGDL 89

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)

Query: 5   SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
           S+ +GQG+FG+V++G+ +          VA+K +   A   ER  F  E   +   +  +
Sbjct: 11  SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 70

Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
           +V+L G  + G P  ++ME    G L + L+
Sbjct: 71  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 101

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 35.2 bits (81), Expect = 0.003
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 17/105 (16%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVS-HPNI 55
           K++G+G+FG V     KG   N++ A+K ++ +      + +   VE R L+    HP +
Sbjct: 1   KVLGKGSFGKVMLAELKG--TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFL 58

Query: 56  VKLYGAC---TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
             L+  C   T   +  VMEY  GG L   +Q S        + Y
Sbjct: 59  THLF--CTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFY 101

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 34.9 bits (80), Expect = 0.004
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 22/89 (24%)

Query: 6  KIVGQGAFGVVWKGLWQN--QYVAVKHI------------ETEAERKAFAVEVRQLSRVS 51
          K + +GAFG V+ G  +N  +  AVK +            + +AER A A     LS+  
Sbjct: 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALA-----LSK-- 62

Query: 52 HPNIVKLYGAC-TGNPVCLVMEYAEGGSL 79
           P IV LY +  + N V LVMEY  GG +
Sbjct: 63 SPFIVHLYYSLQSANNVYLVMEYLIGGDV 91

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 8   VGQGAFGVVWKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGA-C 62
           +G+G+ G+V     ++  + VAVK ++   +  R+    EV  +    H N+V +Y +  
Sbjct: 30  IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL 89

Query: 63  TGNPVCLVMEYAEGGSL 79
            G+ + +VME+ EGG+L
Sbjct: 90  VGDELWVVMEFLEGGAL 106

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	106
KOG0595|consensus	429		99.92
KOG0575|consensus	592		99.88
KOG0615|consensus	475		99.86
KOG0611|consensus	668		99.83
KOG0605|consensus	550		99.82
KOG0600|consensus	560		99.82
KOG0583|consensus	370		99.82
KOG0616|consensus	355		99.8
KOG0598|consensus	357		99.79
KOG0588|consensus	786		99.78
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.77
KOG0581|consensus	364		99.77
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.76
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.76
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.76
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.76
KOG0597|consensus	808		99.76
KOG0192|consensus	362		99.75
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.75
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.74
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.74
KOG0593|consensus	396		99.74
KOG0586|consensus	596		99.74
KOG0032|consensus	382		99.73
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.73
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.72
KOG0197|consensus	468		99.72
KOG0592|consensus	604		99.72
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.72
KOG0663|consensus	419		99.72
KOG0580|consensus	281		99.71
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.71
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.71
KOG0610|consensus	459		99.7
KOG0194|consensus	474		99.7
KOG0659|consensus	318		99.7
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.7
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.7
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.7
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.7
KOG0591|consensus	375		99.7
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.69
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.69
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.69
KOG0661|consensus	538		99.69
KOG0033|consensus	355		99.69
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.68
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.68
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.68
KOG4717|consensus	864		99.68
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.68
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.67
KOG1187|consensus	361		99.67
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.67
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.67
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.67
KOG0198|consensus	313		99.67
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.67
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.67
KOG0589|consensus	426		99.66
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.66
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.66
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.65
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.65
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.65
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.65
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.65
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.65
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.64
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.64
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.64
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.64
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.64
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.63
KOG1094|consensus	807		99.63
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.63
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.63
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.63
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.63
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.63
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.63
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.63
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.63
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.63
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.62
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.62
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.62
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.62
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.62
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.62
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.62
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.62
KOG4236|consensus	888		99.62
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.62
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.62
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.62
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.62
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.62
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.62
KOG0667|consensus	586		99.62
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.62
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.61
PHA02988	283	hypothetical protein; Provisional	99.61
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.61
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.61
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.61
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.61
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.61
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.61
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.61
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.6
KOG0585|consensus	576		99.6
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.6
PTZ00267	478	NIMA-related protein kinase; Provisional	99.6
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.6
KOG0584|consensus	632		99.6
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.6
KOG0574|consensus	502		99.6
KOG0582|consensus	516		99.6
KOG1026|consensus	774		99.6
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.6
KOG0612|consensus	1317		99.6
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.6
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.6
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.59
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.59
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.59
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.59
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.59
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.59
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.59
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.59
KOG0662|consensus	292		99.59
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.59
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.58
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.58
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.58
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.58
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.58
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.58
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.58
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.58
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.58
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.58
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.58
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.58
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.58
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.58
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.58
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.57
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.57
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.57
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.57
PHA03212	391	serine/threonine kinase US3; Provisional	99.57
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.57
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.57
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.57
KOG0201|consensus	467		99.57
KOG0599|consensus	411		99.57
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.57
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.57
KOG0660|consensus	359		99.57
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.57
KOG4257|consensus	974		99.57
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.57
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.57
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.57
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.56
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.56
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.56
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.56
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.56
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.56
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.56
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.56
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.56
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.56
KOG0694|consensus	694		99.56
KOG0594|consensus	323		99.56
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.55
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.55
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.55
KOG1095|consensus	1025		99.55
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.55
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.55
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.55
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.55
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.55
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.55
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.55
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.55
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.55
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.55
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.55
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.55
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.55
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.55
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.54
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.54
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.54
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.54
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.54
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.54
KOG1989|consensus	738		99.54
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.54
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.54
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.54
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.54
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.54
KOG1151|consensus	775		99.54
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.54
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.54
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.53
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.53
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.53
KOG0658|consensus	364		99.53
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.53
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.53
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.53
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.53
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.53
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.53
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.53
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.53
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.53
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.53
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.53
KOG0196|consensus	996		99.53
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.52
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.52
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.52
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.52
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.52
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.52
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.52
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.52
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.52
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.52
KOG4250|consensus	732		99.52
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.51
KOG0578|consensus	550		99.51
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.51
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.51
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.51
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.51
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.51
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.51
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.51
PTZ00283	496	serine/threonine protein kinase; Provisional	99.51
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.51
KOG2052|consensus	513		99.5
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.5
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.5
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.5
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.5
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.5
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.5
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.49
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.49
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.49
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.49
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.49
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.49
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.49
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.48
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.48
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.48
KOG0690|consensus	516		99.48
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.48
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.48
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.48
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.48
KOG4278|consensus	1157		99.48
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.48
KOG0199|consensus	1039		99.47
PHA03207	392	serine/threonine kinase US3; Provisional	99.47
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.47
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.47
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.47
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.47
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.47
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.47
KOG0193|consensus	678		99.47
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.46
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.46
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.46
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.46
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.46
KOG4721|consensus	904		99.46
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.46
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.46
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.46
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.46
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.46
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.45
PTZ00036	440	glycogen synthase kinase; Provisional	99.45
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.45
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.45
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.45
PTZ00284	467	protein kinase; Provisional	99.45
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.45
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.45
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.45
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.45
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.45
PLN00009	294	cyclin-dependent kinase A; Provisional	99.44
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.44
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.44
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.44
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.44
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.44
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.44
KOG0607|consensus	463		99.44
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.43
KOG0666|consensus	438		99.43
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.43
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.43
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.43
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.43
KOG1290|consensus	590		99.43
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.43
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.42
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.42
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.42
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.41
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.41
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.41
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.41
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.41
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.41
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.41
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.41
PHA03209	357	serine/threonine kinase US3; Provisional	99.41
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.41
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.4
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.4
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.4
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.4
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.4
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.39
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.39
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.38
KOG0608|consensus	1034		99.38
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.38
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.37
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.37
PHA03211	461	serine/threonine kinase US3; Provisional	99.37
KOG3653|consensus	534		99.37
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.37
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.36
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.35
KOG1152|consensus	772		99.35
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.35
KOG1025|consensus	1177		99.35
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.34
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.34
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.34
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.34
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.33
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.31
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.31
KOG0579|consensus	1187		99.31
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.31
KOG0577|consensus	948		99.29
KOG0587|consensus	953		99.29
KOG4645|consensus	1509		99.28
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.28
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.27
PRK09188	365	serine/threonine protein kinase; Provisional	99.27
KOG4279|consensus	1226		99.25
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.24
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.24
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.24
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.24
KOG0604|consensus	400		99.22
KOG0576|consensus	829		99.22
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.21
KOG2345|consensus	302		99.21
PHA03210	501	serine/threonine kinase US3; Provisional	99.19
KOG0671|consensus	415		99.18
PRK10345	210	hypothetical protein; Provisional	99.17
KOG0695|consensus	593		99.16
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.15
KOG0696|consensus	683		99.15
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.14
KOG0668|consensus	338		99.13
KOG0669|consensus	376		99.08
KOG0596|consensus	677		99.07
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.05
KOG0200|consensus	609		99.02
smart00090	237	RIO RIO-like kinase.	99.01
KOG0986|consensus	591		99.0
KOG1345|consensus	378		98.99
PRK14879	211	serine/threonine protein kinase; Provisional	98.98
KOG1167|consensus	418		98.95
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.91
KOG0614|consensus	732		98.91
KOG0670|consensus	752		98.85
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.82
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.81
KOG0603|consensus	612		98.8
KOG1035|consensus	1351		98.77
KOG1163|consensus	341		98.73
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.73
KOG1027|consensus	903		98.66
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.64
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.63
PHA02882	294	putative serine/threonine kinase; Provisional	98.58
KOG0664|consensus	449		98.53
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.47
KOG1164|consensus	322		98.41
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.41
KOG1006|consensus	361		98.36
KOG1165|consensus	449		98.34
KOG0195|consensus	448		98.32
PRK12274	218	serine/threonine protein kinase; Provisional	98.22
KOG0983|consensus	391		98.2
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.18
KOG1166|consensus	974		98.13
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.07
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.05
KOG0984|consensus	282		97.95
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.94
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.69
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.63
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.56
KOG1024|consensus	563		97.49
KOG0665|consensus	369		97.41
KOG3741|consensus	655		97.08
KOG1243|consensus	690		96.69
KOG0590|consensus	601		96.57
KOG0590|consensus	601		96.53
KOG1240|consensus	1431		96.36
PF01636	239	APH: Phosphotransferase enzyme family This family	96.35
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.12
PRK10593	297	hypothetical protein; Provisional	96.07
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	95.79
KOG3087|consensus	229		95.52
KOG0603|consensus	612		95.23
KOG1266|consensus	458		95.05
KOG1023|consensus	484		94.94
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.65
KOG1235|consensus	538		94.45
KOG0601|consensus	524		94.36
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	93.33
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	93.11
PLN02876	822	acyl-CoA dehydrogenase	92.39
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	92.29
KOG0601|consensus	524		91.42
COG0478	304	RIO-like serine/threonine protein kinase fused to	91.37
KOG4158|consensus	598		90.48
KOG2270|consensus	520		89.25
PLN00181	793	protein SPA1-RELATED; Provisional	89.08
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	88.37
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	88.22
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	84.55
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	84.18
KOG1035|consensus	1351		82.45
PRK09550	401	mtnK methylthioribose kinase; Reviewed	82.36

>KOG0595|consensus

Probab=99.92  E-value=7.2e-25  Score=133.97  Aligned_cols=104  Identities=29%  Similarity=0.457  Sum_probs=93.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |...+.||.|+|+.||++.++  +..+++|.+...    ...+.+..|+.+++.++|+||+.+.+.+ .++.+++|||||
T Consensus        12 y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC   91 (429)
T KOG0595|consen   12 YELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYC   91 (429)
T ss_pred             ceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeC
Confidence            677788999999999999887  788999998633    3566788999999999999999999999 568899999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .||+|.+|+++.+.++++.++.+|+||..|+
T Consensus        92 ~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~al  122 (429)
T KOG0595|consen   92 NGGDLSDYIRRRGRLPEATARHFMQQLASAL  122 (429)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999998899999999999998775

>KOG0575|consensus

Probab=99.88  E-value=3.2e-22  Score=127.15  Aligned_cols=105  Identities=24%  Similarity=0.353  Sum_probs=95.5

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecC-----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      .|...+.||+|+|+.+|.+.+.  |..+|+|.+..     ...++.+.+|+.+.+.++||||+++++.| +.+.+|++.|
T Consensus        19 ~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLE   98 (592)
T KOG0575|consen   19 RYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLE   98 (592)
T ss_pred             eeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEE
Confidence            3788999999999999999884  89999999864     34567899999999999999999999999 5688999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+.++|.+++++++.+++++++.+++||+.|+
T Consensus        99 LC~~~sL~el~Krrk~ltEpEary~l~QIv~Gl  131 (592)
T KOG0575|consen   99 LCHRGSLMELLKRRKPLTEPEARYFLRQIVEGL  131 (592)
T ss_pred             ecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHH
Confidence            999999999999989999999999999999875

>KOG0615|consensus

Probab=99.86  E-value=2.3e-21  Score=119.18  Aligned_cols=104  Identities=27%  Similarity=0.429  Sum_probs=91.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---------HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---------ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~l   69 (106)
                      |-..+.||+|+||.|..+..+  ++.+|+|+++...         ....+.+|+.+|+.++||+++++.++|. +.+.|+
T Consensus       174 yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Ym  253 (475)
T KOG0615|consen  174 YIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYM  253 (475)
T ss_pred             eEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEE
Confidence            456789999999999999876  8999999997431         1234679999999999999999999995 577899


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||||++||+|++.+..++.+.++..+.+..|++.|+
T Consensus       254 VlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~av  289 (475)
T KOG0615|consen  254 VLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAV  289 (475)
T ss_pred             EEEEecCccHHHHHHhccccccchhHHHHHHHHHHH
Confidence            999999999999999999999999999999999875

>KOG0611|consensus

Probab=99.83  E-value=2e-21  Score=120.21  Aligned_cols=104  Identities=24%  Similarity=0.447  Sum_probs=92.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |++.+.||+|.||.|-++..+  +..+++|.|+..     ...-.+.+|+.+|..++||||+.++++| +.+.+.+||||
T Consensus        55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEY  134 (668)
T KOG0611|consen   55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEY  134 (668)
T ss_pred             HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEe
Confidence            677889999999999998765  899999988632     2334577899999999999999999999 56889999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ..+|+|++|+..++.+++.+++.+.+||.+|+
T Consensus       135 aS~GeLYDYiSer~~LsErEaRhfFRQIvSAV  166 (668)
T KOG0611|consen  135 ASGGELYDYISERGSLSEREARHFFRQIVSAV  166 (668)
T ss_pred             cCCccHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999874

>KOG0605|consensus

Probab=99.82  E-value=6.7e-20  Score=115.49  Aligned_cols=105  Identities=25%  Similarity=0.364  Sum_probs=93.2

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      .|..++.||+|+||.||.++.+  |..+|+|.+++..     ....+..|..+|....++++++++-.| +..++|+|||
T Consensus       142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiME  221 (550)
T KOG0605|consen  142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIME  221 (550)
T ss_pred             cchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEE
Confidence            3778999999999999999877  8899999997543     235677888899999999999999888 5588999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |++||++..+|.+.+.++++++++|+.+.+.||
T Consensus       222 ylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI  254 (550)
T KOG0605|consen  222 YLPGGDMMTLLMRKDTLTEDWARFYIAETVLAI  254 (550)
T ss_pred             ecCCccHHHHHHhcCcCchHHHHHHHHHHHHHH
Confidence            999999999999999999999999999988876

>KOG0600|consensus

Probab=99.82  E-value=1.8e-20  Score=117.60  Aligned_cols=104  Identities=26%  Similarity=0.375  Sum_probs=89.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEec----CHHHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv~e   72 (106)
                      |+.++.||+|+||.||++++.  +..||+|.++    .+.......+|+.+++++.||||+++.++..   .+++|+|+|
T Consensus       119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFe  198 (560)
T KOG0600|consen  119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFE  198 (560)
T ss_pred             HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEe
Confidence            566788999999999999876  8899999885    2334556789999999999999999999883   368999999


Q ss_pred             ecCCCChHHHHhcCC-CCchhhhhhhhhccccCCC
Q psy9377          73 YAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSSS  106 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~~  106 (106)
                      ||++ ||..++...+ .+++.+++.||.|||.+|+
T Consensus       199 YMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~  232 (560)
T KOG0600|consen  199 YMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLE  232 (560)
T ss_pred             cccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHH
Confidence            9988 9999998743 6999999999999999874

>KOG0583|consensus

Probab=99.82  E-value=1e-19  Score=113.24  Aligned_cols=104  Identities=26%  Similarity=0.424  Sum_probs=90.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----H---HHHHHHHHHHHHhcCC-CCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----A---ERKAFAVEVRQLSRVS-HPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~---~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |...+.||+|+||.|+.+.+.  +..+|+|.++..    .   ....+.+|+.+++.++ |||++++.+++ +...+++|
T Consensus        19 y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~iv   98 (370)
T KOG0583|consen   19 YELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIV   98 (370)
T ss_pred             eeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEE
Confidence            678899999999999999876  789999977542    1   2345668999999998 99999999999 45779999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+.||+|++++...+.+.++.++.+.+|+.+|+
T Consensus        99 mEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav  133 (370)
T KOG0583|consen   99 MEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAV  133 (370)
T ss_pred             EEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence            99999999999999988899999999999999986

>KOG0616|consensus

Probab=99.80  E-value=2.7e-19  Score=106.49  Aligned_cols=104  Identities=31%  Similarity=0.452  Sum_probs=92.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |..+++||.|+||.|...+.+  +..+|+|.++...     ..+...+|..+++.+.||.++++++.+ +...+++||||
T Consensus        46 fe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmey  125 (355)
T KOG0616|consen   46 FERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEY  125 (355)
T ss_pred             hhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEec
Confidence            678899999999999998776  7889999987543     235677899999999999999999888 56889999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+||.|+.++++.+.++++.+++|..|++.||
T Consensus       126 v~GGElFS~Lrk~~rF~e~~arFYAAeivlAl  157 (355)
T KOG0616|consen  126 VPGGELFSYLRKSGRFSEPHARFYAAEIVLAL  157 (355)
T ss_pred             cCCccHHHHHHhcCCCCchhHHHHHHHHHHHH
Confidence            99999999999999999999999999999886

>KOG0598|consensus

Probab=99.79  E-value=4.4e-19  Score=107.58  Aligned_cols=104  Identities=30%  Similarity=0.435  Sum_probs=92.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.++++||+|+||.|+..+.+  ++.+|+|.+++..     ..+....|..++..++||.+++++-.| +...+|+|+||
T Consensus        27 F~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~  106 (357)
T KOG0598|consen   27 FEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDY  106 (357)
T ss_pred             eeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEec
Confidence            678999999999999998766  7899999887442     345677899999999999999998888 55889999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.||+|...|++.+.++++.++.|+..|+.||
T Consensus       107 ~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL  138 (357)
T KOG0598|consen  107 LNGGELFYHLQREGRFSEDRARFYLAEIVLAL  138 (357)
T ss_pred             cCCccHHHHHHhcCCcchhHHHHHHHHHHHHH
Confidence            99999999999999999999999999998886

>KOG0588|consensus

Probab=99.78  E-value=3.4e-19  Score=115.01  Aligned_cols=104  Identities=23%  Similarity=0.391  Sum_probs=93.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+.++.||+|+-|.|..+++.  |+.+|+|++...     .....+.+|+.+|+.+.|||++.++++| +..++|++.||
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy   93 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY   93 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence            467889999999999999887  899999999643     2356788999999999999999999999 55889999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||.|++++..++++++.++..+..||+.|+
T Consensus        94 v~gGELFdylv~kG~l~e~eaa~ff~QIi~gv  125 (786)
T KOG0588|consen   94 VPGGELFDYLVRKGPLPEREAAHFFRQILDGV  125 (786)
T ss_pred             cCCchhHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999875

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.77  E-value=7.1e-18  Score=105.50  Aligned_cols=105  Identities=23%  Similarity=0.305  Sum_probs=90.5

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEe
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      +|..++.||+|+||.||++.+.  +..+++|.++...     ....+.+|+.++..++|+|++++++.+. .+..+++||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            4788899999999999999876  6789999986432     2345778999999999999999999884 577999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++.....+++..++.++.|++.||
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL  114 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAI  114 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999998877788888999999998775

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0581|consensus

Probab=99.77  E-value=4.5e-18  Score=103.38  Aligned_cols=103  Identities=26%  Similarity=0.328  Sum_probs=91.0

Q ss_pred             CCceeEeecCcceEEEEEEC--CceEEEEEec---CHHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecC-ceEEEEeecC
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGN-PVCLVMEYAE   75 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~lv~e~~~   75 (106)
                      ..++.||+|.-|.|+++.++  +..+|+|.+.   .+...+.+.+|+.++...++|+|+.+++.| ..+ .+.++||||.
T Consensus        82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD  161 (364)
T KOG0581|consen   82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD  161 (364)
T ss_pred             hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence            35678999999999999988  7889999984   345577899999999999999999999999 445 4999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|+..+...+..++.....+..+++.+|
T Consensus       162 gGSLd~~~k~~g~i~E~~L~~ia~~VL~GL  191 (364)
T KOG0581|consen  162 GGSLDDILKRVGRIPEPVLGKIARAVLRGL  191 (364)
T ss_pred             CCCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999888899999999999998876

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=7.3e-18  Score=104.76  Aligned_cols=104  Identities=24%  Similarity=0.355  Sum_probs=90.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |++.+.||+|+||.||.+.+.  +..+++|.+....     ....+.+|+.++..++|+|++++++.+ ..+..+++|||
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~   82 (364)
T cd05599           3 FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEY   82 (364)
T ss_pred             ceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECC
Confidence            788899999999999999876  7889999986332     234567899999999999999999988 45789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++...+.+++..++.++.|++.||
T Consensus        83 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL  114 (364)
T cd05599          83 LPGGDMMTLLMKKDTFTEEETRFYIAETILAI  114 (364)
T ss_pred             CCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998877889999999999999875

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.76  E-value=1.1e-17  Score=104.57  Aligned_cols=105  Identities=22%  Similarity=0.314  Sum_probs=90.4

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      +|...+.||+|+||.||++...  +..+++|.+....     ....+.+|+.++..++|+|++++++.+ ..+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            4788899999999999999876  6789999886432     234677899999999999999999988 4578999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++.+.+.+++..++.++.|++.|+
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al  114 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAV  114 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999998877788899999999998775

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=1.3e-17  Score=104.16  Aligned_cols=104  Identities=23%  Similarity=0.323  Sum_probs=89.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+...  +..+++|.+....     ....+.+|+.++..++|||++++++.+. .+..+++|||
T Consensus         3 y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~   82 (377)
T cd05629           3 FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEF   82 (377)
T ss_pred             ceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeC
Confidence            778899999999999999876  7889999885321     2345778999999999999999999984 5779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++...+.+++..++.++.|++.||
T Consensus        83 ~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL  114 (377)
T cd05629          83 LPGGDLMTMLIKYDTFSEDVTRFYMAECVLAI  114 (377)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998877888999999999998875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.76  E-value=1.3e-17  Score=104.11  Aligned_cols=105  Identities=24%  Similarity=0.312  Sum_probs=90.4

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      .|++.+.||+|+||.||.+...  +..+++|.+....     ....+.+|+.++..++|+|++++++.+ ..+..+++||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            4788999999999999999876  7889999886332     234577899999999999999999988 4578999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++...+.+++..++.++.|++.|+
T Consensus        82 ~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al  114 (376)
T cd05598          82 YIPGGDMMSLLIRLGIFEEDLARFYIAELTCAI  114 (376)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999998877788899999999998775

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0597|consensus

Probab=99.76  E-value=5e-19  Score=113.08  Aligned_cols=103  Identities=32%  Similarity=0.454  Sum_probs=91.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |.+.+.||+|+||.||+++.+  ...+++|.+.+    ......+.+|++++..++||||+.++++| +..+.++|.||+
T Consensus         4 yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a   83 (808)
T KOG0597|consen    4 YHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYA   83 (808)
T ss_pred             hhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhh
Confidence            566778999999999999776  57789998863    23456788999999999999999999999 668999999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .| +|..++...++++++.++.+..++.+||
T Consensus        84 ~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL  113 (808)
T KOG0597|consen   84 VG-DLFTILEQDGKLPEEQVRAIAYDLVSAL  113 (808)
T ss_pred             hh-hHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence            87 9999999999999999999999998875

>KOG0192|consensus

Probab=99.75  E-value=2.2e-17  Score=102.41  Aligned_cols=101  Identities=42%  Similarity=0.660  Sum_probs=85.0

Q ss_pred             ceeEeecCcceEEEEEECCce-EEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEecC--ceEEEEeecCCC
Q psy9377           5 SKIVGQGAFGVVWKGLWQNQY-VAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTGN--PVCLVMEYAEGG   77 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~~~-~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~lv~e~~~~g   77 (106)
                      .+.+|+|+||.||++.+++.. +++|.+...    .....+.+|+.++..++||||+.+.+.+..+  ..++||||+++|
T Consensus        46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G  125 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG  125 (362)
T ss_pred             hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence            456899999999999999887 999988643    2256899999999999999999999999654  599999999999


Q ss_pred             ChHHHHhc--CCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQR--SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~--~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++..  ...++.+....++.|+..|+
T Consensus       126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm  155 (362)
T KOG0192|consen  126 SLSVLLHKKRKRKLPLKVRLRIALDIARGM  155 (362)
T ss_pred             cHHHHHhhcccCCCCHHHHHHHHHHHHHHH
Confidence            99999987  45677777777877776543

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.75  E-value=2.4e-17  Score=102.55  Aligned_cols=105  Identities=19%  Similarity=0.248  Sum_probs=90.4

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEe
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      .|+..+.||+|+||.||.+...  +..+++|.++...     ....+.+|+.++..++|++++++.+.+. ....+++||
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E   81 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME   81 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence            3788899999999999999876  7889999986432     2345677889999999999999999884 577999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++.+.+.+++..++.++.|++.||
T Consensus        82 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL  114 (363)
T cd05628          82 FLPGGDMMTLLMKKDTLTEEETQFYIAETVLAI  114 (363)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999888889999999999998875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.74  E-value=2.3e-17  Score=101.45  Aligned_cols=104  Identities=24%  Similarity=0.395  Sum_probs=89.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....     ....+.+|+.++..++|||++++.+.+ ..+..+++|||
T Consensus        20 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   99 (329)
T PTZ00263         20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEF   99 (329)
T ss_pred             eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcC
Confidence            567789999999999999886  6789999886432     234577899999999999999999988 45789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+|+|.+++...+.++++.++.++.|++.||
T Consensus       100 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL  131 (329)
T PTZ00263        100 VVGGELFTHLRKAGRFPNDVAKFYHAELVLAF  131 (329)
T ss_pred             CCCChHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999887888899999999998875

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=3.8e-17  Score=100.56  Aligned_cols=104  Identities=25%  Similarity=0.335  Sum_probs=89.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+...     .....+.+|+.++..++|+|++++.+.+. .+..+++|||
T Consensus         3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   82 (333)
T cd05600           3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEY   82 (333)
T ss_pred             cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeC
Confidence            778899999999999999886  678999988633     12345778999999999999999998884 5779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++.....+++..++.++.|++.||
T Consensus        83 ~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l  114 (333)
T cd05600          83 VPGGDFRTLLNNLGVLSEDHARFYMAEMFEAV  114 (333)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998877788889999999998875

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0593|consensus

Probab=99.74  E-value=2e-18  Score=103.39  Aligned_cols=104  Identities=26%  Similarity=0.325  Sum_probs=87.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |+.+..+|+|+||.|++|+++  |+.||+|.+-.    +....-.++|+.++++++|+|++.+.++|. ....++|+|||
T Consensus         4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~   83 (396)
T KOG0593|consen    4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYC   83 (396)
T ss_pred             HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeec
Confidence            778889999999999999887  89999998742    223456789999999999999999999994 57899999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++.-|.++-+.....+.+..+.++.|++.|+
T Consensus        84 dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai  114 (396)
T KOG0593|consen   84 DHTVLHELERYPNGVPSELVKKYLYQLLKAI  114 (396)
T ss_pred             chHHHHHHHhccCCCCHHHHHHHHHHHHHHh
Confidence            9866655555556688899999999999886

>KOG0586|consensus

Probab=99.74  E-value=2.6e-17  Score=105.23  Aligned_cols=105  Identities=30%  Similarity=0.422  Sum_probs=93.5

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      .|.+.++||+|.|+.|..+.+.  +..+++|.|+..    ...+.+.+|+++|+.+.|||+++++++. +...+|+||||
T Consensus        57 ~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ey  136 (596)
T KOG0586|consen   57 LYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEY  136 (596)
T ss_pred             ceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEe
Confidence            4778899999999999999876  889999999743    3356688999999999999999999998 56889999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+|++++++.+++.+.+..++.+..|+.+|+
T Consensus       137 a~~ge~~~yl~~~gr~~e~~ar~~F~q~vsav  168 (596)
T KOG0586|consen  137 ASGGELFDYLVKHGRMKEKEARAKFRQIVSAV  168 (596)
T ss_pred             ccCchhHHHHHhcccchhhhhhhhhHHHHHHH
Confidence            99999999999999888899999999988875

>KOG0032|consensus

Probab=99.73  E-value=2.6e-17  Score=102.82  Aligned_cols=104  Identities=31%  Similarity=0.408  Sum_probs=91.3

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCC-CCceeeeeeeE-ecCceEEEE
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVS-HPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      .|...+.||+|.||.||.+..+  +..+++|.+....     ....+.+|+.+++.++ |||++.+.+.+ +...+++||
T Consensus        36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvm  115 (382)
T KOG0032|consen   36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVM  115 (382)
T ss_pred             cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEE
Confidence            3777889999999999999877  7889999986432     2357889999999998 99999999999 457899999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |++.||+|++.+... ++++..+..+++|++.|+
T Consensus       116 EL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av  148 (382)
T KOG0032|consen  116 ELCEGGELFDRIVKK-HYSERDAAGIIRQILEAV  148 (382)
T ss_pred             EecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHH
Confidence            999999999999876 489999999999998875

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=2.2e-17  Score=99.99  Aligned_cols=104  Identities=29%  Similarity=0.367  Sum_probs=89.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |...+.||+|+||.||++.+.  +..+++|.+....     ....+.+|+.++..++|||++++.+.+ ..+..+++|||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   82 (291)
T cd05612           3 LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEY   82 (291)
T ss_pred             ceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeC
Confidence            778899999999999999876  7889999886322     234577899999999999999998887 45779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++...+.+++..+..++.|++.||
T Consensus        83 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l  114 (291)
T cd05612          83 VPGGELFSYLRNSGRFSNSTGLFYASEIVCAL  114 (291)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999887888888889999998775

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.72  E-value=1.1e-16  Score=99.48  Aligned_cols=104  Identities=20%  Similarity=0.286  Sum_probs=89.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |+..+.||+|+||.||.+...  +..+++|.++...     ....+..|..++..++|++++++.+.+. .+..+++|||
T Consensus         3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~   82 (360)
T cd05627           3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEF   82 (360)
T ss_pred             ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence            678899999999999999876  7889999886332     2345677888999999999999998884 5789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++.+.+.+++..++.++.|++.||
T Consensus        83 ~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L  114 (360)
T cd05627          83 LPGGDMMTLLMKKDTLSEEATQFYIAETVLAI  114 (360)
T ss_pred             CCCccHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998887889999999999998775

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0197|consensus

Probab=99.72  E-value=1e-17  Score=105.31  Aligned_cols=102  Identities=32%  Similarity=0.545  Sum_probs=85.4

Q ss_pred             CceeEeecCcceEEEEEECC-ceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEec-CceEEEEeecCCCChH
Q psy9377           4 GSKIVGQGAFGVVWKGLWQN-QYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACTG-NPVCLVMEYAEGGSLY   80 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~-~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~lv~e~~~~g~l~   80 (106)
                      ..+.||+|.||.|+.+.+++ ..+++|.+... ...+.+.+|+.+|+.++|++++++++++.. ..++|||||++.|+|.
T Consensus       210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl  289 (468)
T KOG0197|consen  210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL  289 (468)
T ss_pred             HHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence            45789999999999999995 48999988753 345778899999999999999999999965 6699999999999999


Q ss_pred             HHHhc--CCCCchhhhhhhhhccccCC
Q psy9377          81 NELQR--SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        81 ~~l~~--~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|+.  ...+.......++.|+..+.
T Consensus       290 ~yLr~~~~~~l~~~~Ll~~a~qIaeGM  316 (468)
T KOG0197|consen  290 DYLRTREGGLLNLPQLLDFAAQIAEGM  316 (468)
T ss_pred             HHhhhcCCCccchHHHHHHHHHHHHHH
Confidence            99997  33566666677888876653

>KOG0592|consensus

Probab=99.72  E-value=1.3e-17  Score=105.70  Aligned_cols=105  Identities=23%  Similarity=0.337  Sum_probs=91.1

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHH-----HHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEE
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAER-----KAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~-----~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      +|.+++.||+|+|++|+++...  +..||+|++.+....     .-+..|-.+|..+ .||.+++|+-.| ++..+|+|+
T Consensus        74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL  153 (604)
T KOG0592|consen   74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL  153 (604)
T ss_pred             hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence            4788999999999999999877  789999988654322     2356677788888 799999999888 457899999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++|+|.++|++.+.+.+.+++.|..||+.||
T Consensus       154 e~A~nGdll~~i~K~Gsfde~caR~YAAeIldAl  187 (604)
T KOG0592|consen  154 EYAPNGDLLDLIKKYGSFDETCARFYAAEILDAL  187 (604)
T ss_pred             EecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999986

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.72  E-value=8.5e-17  Score=99.48  Aligned_cols=104  Identities=24%  Similarity=0.349  Sum_probs=87.9

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |+..+.||+|+||.||.+.+.   +..+++|.+...     .....+.+|+.++..++|||++++++.+. .+..+++||
T Consensus        32 y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~E  111 (340)
T PTZ00426         32 FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLE  111 (340)
T ss_pred             cEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEe
Confidence            667889999999999999765   257899987532     22345778999999999999999999984 577999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+.+|+|.+++.....++++.+..++.|++.||
T Consensus       112 y~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL  144 (340)
T PTZ00426        112 FVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIF  144 (340)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999888888999999999998775

>KOG0663|consensus

Probab=99.72  E-value=4.8e-18  Score=102.77  Aligned_cols=103  Identities=21%  Similarity=0.294  Sum_probs=86.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv~e   72 (106)
                      |..++.|++|+||.||++++.  +..||+|.++-.    ...=..++|+.++...+||||+.+..+.-   -+.+|+|||
T Consensus        78 fe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe  157 (419)
T KOG0663|consen   78 FEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVME  157 (419)
T ss_pred             HHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHH
Confidence            566789999999999999887  789999988632    22334578999999999999999998883   267999999


Q ss_pred             ecCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++ +|..++.. .+++...+++.++.|+|.|+
T Consensus       158 ~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~gl  190 (419)
T KOG0663|consen  158 YVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGL  190 (419)
T ss_pred             HHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHH
Confidence            9987 89999886 45788999999999999875

>KOG0580|consensus

Probab=99.71  E-value=5.1e-18  Score=98.53  Aligned_cols=105  Identities=27%  Similarity=0.401  Sum_probs=89.1

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      .|.+.+.||+|.||.||.+..+  .-.+++|.+....     ....+.+|+.+-..++||||++++++| +...+|+++|
T Consensus        23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilE  102 (281)
T KOG0580|consen   23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILE  102 (281)
T ss_pred             hccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEE
Confidence            3778999999999999999876  5678999875432     234567788888889999999999999 5578999999


Q ss_pred             ecCCCChHHHHh--cCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQ--RSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~--~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+.|+++..|+  ....+.+..+..|+.|+.+|+
T Consensus       103 ya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al  137 (281)
T KOG0580|consen  103 YAPRGELYKDLQEGRMKRFDEQRAATYIKQLANAL  137 (281)
T ss_pred             ecCCchHHHHHHhcccccccccchhHHHHHHHHHH
Confidence            999999999999  556788999999999998876

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.71  E-value=2e-16  Score=97.40  Aligned_cols=104  Identities=26%  Similarity=0.280  Sum_probs=88.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |++.+.||+|+||.||++.+.  +..+++|.+...   .....+.+|+.++..++|+|++++.+.+ ..+..+++|||++
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   86 (331)
T cd06649           7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD   86 (331)
T ss_pred             ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCC
Confidence            778899999999999999887  677888887532   3345688999999999999999999988 5578999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.+++.....+++..+..++.|++.|+
T Consensus        87 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l  116 (331)
T cd06649          87 GGSLDQVLKEAKRIPEEILGKVSIAVLRGL  116 (331)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999998877788888888888887765

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.71  E-value=2.1e-16  Score=97.45  Aligned_cols=104  Identities=26%  Similarity=0.308  Sum_probs=88.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |++.+.||+|+||.||.+.+.  +..+++|.+...   .....+.+|+.++..++|+|++++.+.+ ..+..+++|||++
T Consensus         7 y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   86 (333)
T cd06650           7 FEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD   86 (333)
T ss_pred             hheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCC
Confidence            788899999999999999886  667888877532   3345688999999999999999999998 5578999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.+++...+.+++..+..++.|++.|+
T Consensus        87 ~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l  116 (333)
T cd06650          87 GGSLDQVLKKAGRIPEQILGKVSIAVIKGL  116 (333)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999998877777888888888887664

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0610|consensus

Probab=99.70  E-value=2.9e-17  Score=101.35  Aligned_cols=105  Identities=28%  Similarity=0.345  Sum_probs=89.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |+.++.||.|..|.||.+..+  +..+|+|.+++..     ....++.|..++..++||-+.+++..+. +...+++|||
T Consensus        79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~mey  158 (459)
T KOG0610|consen   79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEY  158 (459)
T ss_pred             HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEec
Confidence            345678999999999999888  4789999997542     2345777889999999999999999995 5779999999


Q ss_pred             cCCCChHHHHhcC--CCCchhhhhhhhhccccCCC
Q psy9377          74 AEGGSLYNELQRS--SAASLKFCKIYLPFWFSSSS  106 (106)
Q Consensus        74 ~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~~  106 (106)
                      |+||+|..+.+++  +.++++.+++|+..++.||+
T Consensus       159 CpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALE  193 (459)
T KOG0610|consen  159 CPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALE  193 (459)
T ss_pred             CCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHH
Confidence            9999999988864  46999999999999988763

>KOG0194|consensus

Probab=99.70  E-value=2.1e-16  Score=100.22  Aligned_cols=100  Identities=34%  Similarity=0.502  Sum_probs=79.3

Q ss_pred             ceeEeecCcceEEEEEEC--Cc---e-EEEEEecC-----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           5 SKIVGQGAFGVVWKGLWQ--NQ---Y-VAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~--~~---~-~~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      .+.||+|+||.|+.+..+  +.   . ||+|....     ......+.+|.++|+.++|||+++++|+. ...+++++||
T Consensus       162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmE  241 (474)
T KOG0194|consen  162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVME  241 (474)
T ss_pred             cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEE
Confidence            478999999999999765  21   2 78887653     23456789999999999999999999999 4578999999


Q ss_pred             ecCCCChHHHHhcCCC-CchhhhhhhhhccccC
Q psy9377          73 YAEGGSLYNELQRSSA-ASLKFCKIYLPFWFSS  104 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~-~~~~~~~~~~~qll~~  104 (106)
                      +|.||+|.++|++.+. .+..+-..++.+...+
T Consensus       242 l~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~G  274 (474)
T KOG0194|consen  242 LCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARG  274 (474)
T ss_pred             ecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhH
Confidence            9999999999998763 6655555555554443

>KOG0659|consensus

Probab=99.70  E-value=2.5e-17  Score=96.98  Aligned_cols=103  Identities=23%  Similarity=0.341  Sum_probs=88.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |...+.+|+|.||.||++.+.  |+.+|+|.|+..    .......+|+..++.++|+|++.+.+.|. ...+.+|+||+
T Consensus         4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm   83 (318)
T KOG0659|consen    4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFM   83 (318)
T ss_pred             hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEec
Confidence            677889999999999999876  889999999733    23467889999999999999999999994 57799999999


Q ss_pred             CCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +. +|+..++.+. .++....+.|+.|+|.++
T Consensus        84 ~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl  114 (318)
T KOG0659|consen   84 PT-DLEVVIKDKNIILSPADIKSYMLMTLKGL  114 (318)
T ss_pred             cc-cHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence            77 9999998754 577788899999998775

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.70  E-value=2.9e-16  Score=96.39  Aligned_cols=100  Identities=32%  Similarity=0.443  Sum_probs=85.1

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      +.||+|+||.||.+...  +..+++|.+....     ....+.+|+.++..++|||++++.+.+ ..+..+++|||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            46899999999999876  7889999886431     234567789999999999999999888 457799999999999


Q ss_pred             ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++...+.+++..++.++.|++.||
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L  108 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSAL  108 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999998887888999999999998875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=3.1e-16  Score=96.58  Aligned_cols=104  Identities=27%  Similarity=0.294  Sum_probs=87.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+...  +..+++|.++...     ....+.+|..++..++|++++++.+.+ ..++.+++|||
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (331)
T cd05597           3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDY   82 (331)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEec
Confidence            778899999999999999876  6789999986321     234467788888899999999999988 45789999999


Q ss_pred             cCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++.+ ...+++..++.++.|++.|+
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l  115 (331)
T cd05597          83 YVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAI  115 (331)
T ss_pred             CCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999976 44688888999999998875

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.70  E-value=3.3e-16  Score=95.53  Aligned_cols=104  Identities=26%  Similarity=0.292  Sum_probs=88.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |++.+.||+|+||.||.+.+.  +..+++|.+..   ......+.+|+.++..++|||++++.+.+ ..+..++++||++
T Consensus         3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~   82 (308)
T cd06615           3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMD   82 (308)
T ss_pred             ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccC
Confidence            778899999999999999876  66778887752   23345678899999999999999999988 5688999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++...+.+++.....++.|++.|+
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l  112 (308)
T cd06615          83 GGSLDQVLKKAGRIPENILGKISIAVLRGL  112 (308)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999998877788888889999988765

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1.6e-16  Score=98.22  Aligned_cols=104  Identities=30%  Similarity=0.402  Sum_probs=90.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++...     ....+..|..++..+.|+|++++++.+ ..+..++||||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (350)
T cd05573           3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEY   82 (350)
T ss_pred             ceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcC
Confidence            778899999999999999887  7889999986432     234577888999999999999999888 45789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++...+.+++..++.++.|++.||
T Consensus        83 ~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL  114 (350)
T cd05573          83 MPGGDLMNLLIRKDVFPEETARFYIAELVLAL  114 (350)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998877788999999999998876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0591|consensus

Probab=99.70  E-value=5.4e-19  Score=104.92  Aligned_cols=104  Identities=27%  Similarity=0.396  Sum_probs=87.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEec----CHHHHHHHHHHHHHHhcCCCCceeeeeee-E-ecCc-eEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGA-C-TGNP-VCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~-~~~~-~~lv~e   72 (106)
                      |.+.+.||+|+||.||++...  +..++.|.++    .....+.+..|+.++++++||||++.+++ + .++. ++++||
T Consensus        21 y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE  100 (375)
T KOG0591|consen   21 YQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVME  100 (375)
T ss_pred             HHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHH
Confidence            667889999999999998765  7888988875    33456788999999999999999999884 3 3444 899999


Q ss_pred             ecCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+|+|.+.++.    ++.++++.+..+.-||+.||
T Consensus       101 ~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL  137 (375)
T KOG0591|consen  101 LCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRAL  137 (375)
T ss_pred             hhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHH
Confidence            9999999999974    34688999999999998876

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.69  E-value=3.9e-16  Score=95.87  Aligned_cols=100  Identities=32%  Similarity=0.448  Sum_probs=84.7

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      +.||+|+||.||.+...  +..+++|.+...     .....+.+|+.++..++|||++++.+.+ ..+..+++|||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            46899999999999876  788999988632     1234566788999999999999999888 457799999999999


Q ss_pred             ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|..++.....+++..+..++.|++.||
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL  108 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSAL  108 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999998877788999999999998875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.69  E-value=2.9e-16  Score=93.91  Aligned_cols=104  Identities=28%  Similarity=0.418  Sum_probs=85.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |++.+.||+|+||.||++.+.     +..+++|.++..   .....+.+|+..+..++|||++++.+.+ ..+..+++||
T Consensus         7 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   86 (266)
T cd05064           7 IKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTE   86 (266)
T ss_pred             eEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEE
Confidence            567889999999999998653     457888887632   2345678899999999999999999988 4578999999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++... ..++...+..++.|++.|+
T Consensus        87 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al  120 (266)
T cd05064          87 YMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGM  120 (266)
T ss_pred             eCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999864 4577888888889988775

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.69  E-value=6.7e-16  Score=95.10  Aligned_cols=104  Identities=25%  Similarity=0.279  Sum_probs=86.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+...  +..+++|.+....     ....+.+|..++...+|++++.+.+.+. .+..+++|||
T Consensus         3 y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey   82 (331)
T cd05624           3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDY   82 (331)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence            778899999999999999876  6789999886321     2334667888888899999999999884 5789999999


Q ss_pred             cCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.+++.. ...+++..++.++.|++.||
T Consensus        83 ~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L  115 (331)
T cd05624          83 YVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAI  115 (331)
T ss_pred             CCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999987 45678888889999988775

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0661|consensus

Probab=99.69  E-value=2.6e-18  Score=107.47  Aligned_cols=104  Identities=22%  Similarity=0.322  Sum_probs=86.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCC-CCceeeeeeeEec-C-ceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVS-HPNIVKLYGACTG-N-PVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~-~-~~~lv~e~   73 (106)
                      |..++.||.|+||.||.++..  +..||+|..+..   ...-.-++|+..++++. ||||+++.+++.+ + .+++||||
T Consensus        12 Y~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~   91 (538)
T KOG0661|consen   12 YTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEF   91 (538)
T ss_pred             HHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHh
Confidence            677889999999999999876  778999877532   11222357899999998 9999999999943 4 79999999


Q ss_pred             cCCCChHHHHhcC-CCCchhhhhhhhhccccCCC
Q psy9377          74 AEGGSLYNELQRS-SAASLKFCKIYLPFWFSSSS  106 (106)
Q Consensus        74 ~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~~  106 (106)
                      |+. +|+++++.+ ..+++..++.+|.|++.+|+
T Consensus        92 Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~  124 (538)
T KOG0661|consen   92 MDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLA  124 (538)
T ss_pred             hhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHH
Confidence            976 999999864 57999999999999998863

>KOG0033|consensus

Probab=99.69  E-value=1e-19  Score=106.42  Aligned_cols=104  Identities=23%  Similarity=0.312  Sum_probs=89.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-CceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-NPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~lv~e~~   74 (106)
                      |++.+.||+|.|+.|+++.+.  |+.+++|.++..    ...+.+.+|+.+.+.++||||+++.+.++. ...|+|+|++
T Consensus        13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m   92 (355)
T KOG0033|consen   13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV   92 (355)
T ss_pred             hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecc
Confidence            566788999999999998766  788888887632    345778899999999999999999998854 6789999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|++|..-+-.+.-.++..+..+++|||.|+
T Consensus        93 ~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal  123 (355)
T KOG0033|consen   93 TGGELFEDIVAREFYSEADASHCIQQILEAL  123 (355)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998887766788999999999999986

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.68  E-value=7.2e-16  Score=96.33  Aligned_cols=103  Identities=25%  Similarity=0.329  Sum_probs=86.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...     .....+.+|+.++..++|||++++.+.+ ..+..+++|||
T Consensus        45 y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey  124 (370)
T cd05621          45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEY  124 (370)
T ss_pred             CeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcC
Confidence            677889999999999999876  678999988532     1234567888999999999999999988 45779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++... .+++..+..++.|++.||
T Consensus       125 ~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL  155 (370)
T cd05621         125 MPGGDLVNLMSNY-DVPEKWAKFYTAEVVLAL  155 (370)
T ss_pred             CCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHH
Confidence            9999999999764 477888899999998876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=4.8e-16  Score=95.02  Aligned_cols=98  Identities=27%  Similarity=0.391  Sum_probs=83.4

Q ss_pred             EeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCCh
Q psy9377           8 VGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         8 lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l   79 (106)
                      ||+|+||.||++.+.  +..+++|.++..     .....+.+|+.++..++|||++++.+.+ ..+..+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            689999999999876  678999988632     2234567888999999999999999888 45789999999999999


Q ss_pred             HHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++...+.+++..+..++.|++.||
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l  106 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCAL  106 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99998877788888899999998775

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.68  E-value=5.2e-16  Score=95.39  Aligned_cols=104  Identities=27%  Similarity=0.304  Sum_probs=88.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++...  +..+++|.++...     ....+.+|+.++..+.|++++++.+.+ ..+..+++|||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (330)
T cd05601           3 FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEY   82 (330)
T ss_pred             ceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECC
Confidence            778899999999999999876  7889999886432     234567788888999999999998888 45779999999


Q ss_pred             cCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++.+. ..+++..++.++.|++.||
T Consensus        83 ~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL  115 (330)
T cd05601          83 QPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAI  115 (330)
T ss_pred             CCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999875 5688889999999998875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG4717|consensus

Probab=99.68  E-value=3.2e-17  Score=104.40  Aligned_cols=105  Identities=28%  Similarity=0.433  Sum_probs=91.4

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      +|..-+.||+|.|+.|..+++.  |..+++|.+++..    ....+..|++.|+.++||||++++++.+ +..+|+|+|+
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            4777789999999999988765  9999999997542    3456788999999999999999999994 5779999999


Q ss_pred             cCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      -.+|+|++||.++. .+.++.++.|..||+-||
T Consensus        99 GD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI  131 (864)
T KOG4717|consen   99 GDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAI  131 (864)
T ss_pred             cCCchHHHHHHhhhccccHHHHHHHHHHHHHHH
Confidence            99999999998764 688999999999999876

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.68  E-value=7.8e-16  Score=94.74  Aligned_cols=100  Identities=30%  Similarity=0.425  Sum_probs=84.9

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      +.||+|+||.||.+...  +..+++|.+...     .....+.+|+.++..++|||++++.+.+. .+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            46899999999999876  788999988632     22345678889999999999999998884 57799999999999


Q ss_pred             ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|..++.....+++..+..++.|++.||
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL  108 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSAL  108 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999998877788888899999998775

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.67  E-value=1e-15  Score=94.20  Aligned_cols=100  Identities=20%  Similarity=0.312  Sum_probs=83.9

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||.+.+.  +..+++|.++...     ....+..|..++..+ +|||++++.+.+. .+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46899999999999876  6789999886421     234466788888777 6999999999884 5779999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++...+.+++..+..++.|++.|+
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l  109 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLAL  109 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877899999999999998775

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG1187|consensus

Probab=99.67  E-value=7.1e-16  Score=95.98  Aligned_cols=86  Identities=40%  Similarity=0.683  Sum_probs=73.4

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHHH--HHHHHHHHHHHhcCCCCceeeeeeeEec-C-ceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEAE--RKAFAVEVRQLSRVSHPNIVKLYGACTG-N-PVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-~~~lv~e~~~~   76 (106)
                      |+..+.||+|+||.||++... +..+++|.++....  ..++.+|+.++..++|+|++++.++|.. + +..+|+||+++
T Consensus        77 Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~n  156 (361)
T KOG1187|consen   77 FSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPN  156 (361)
T ss_pred             CchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCC
Confidence            455678999999999999887 58899998764332  4569999999999999999999999954 5 48999999999


Q ss_pred             CChHHHHhcCC
Q psy9377          77 GSLYNELQRSS   87 (106)
Q Consensus        77 g~l~~~l~~~~   87 (106)
                      |+|.+.+....
T Consensus       157 GsL~d~L~~~~  167 (361)
T KOG1187|consen  157 GSLEDHLHGKK  167 (361)
T ss_pred             CCHHHHhCCCC
Confidence            99999998754

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.67  E-value=9.2e-16  Score=93.94  Aligned_cols=101  Identities=29%  Similarity=0.398  Sum_probs=84.3

Q ss_pred             ceeEeecCcceEEEEEEC-----CceEEEEEecCHH----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           5 SKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      ++.||+|+||.||.+...     +..+++|.+....    ......+|+.++..++|||++++.+.+. .+..+++|||+
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   80 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL   80 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence            367999999999987652     6789999886432    2334667889999999999999999884 57799999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|+|.+++.+...+++..+..++.|++.||
T Consensus        81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l  111 (318)
T cd05582          81 RGGDLFTRLSKEVMFTEEDVKFYLAELALAL  111 (318)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999999998877788999999999998875

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.67  E-value=1.2e-15  Score=93.75  Aligned_cols=100  Identities=31%  Similarity=0.428  Sum_probs=84.1

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      +.||+|+||.||.+.+.  +..+++|.+....     ......+|+.++..++|+|++++.+.+. .+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            46899999999999876  7889999886431     2345667888899999999999988884 57799999999999


Q ss_pred             ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|..++.....+++..+..++.|++.||
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL  108 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSAL  108 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999998877788889899999998775

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.67  E-value=9.8e-16  Score=95.68  Aligned_cols=103  Identities=25%  Similarity=0.288  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++...     ....+.+|+.++..++|||++++.+.+. .+..+++|||
T Consensus        45 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey  124 (370)
T cd05596          45 FDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEY  124 (370)
T ss_pred             cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcC
Confidence            667889999999999999876  7789999886321     2334667899999999999999998884 5779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++... .+++..+..++.|++.||
T Consensus       125 ~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL  155 (370)
T cd05596         125 MPGGDLVNLMSNY-DIPEKWARFYTAEVVLAL  155 (370)
T ss_pred             CCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHH
Confidence            9999999998764 477888888888988775

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0198|consensus

Probab=99.67  E-value=5e-16  Score=94.51  Aligned_cols=103  Identities=33%  Similarity=0.559  Sum_probs=87.4

Q ss_pred             CCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ec-C-ceEEEEeecC
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TG-N-PVCLVMEYAE   75 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~-~~~lv~e~~~   75 (106)
                      ...+.||+|+||.||.+.+.  +...++|.+...  ...+.+.+|+.++..++||||+++++.. .. + .+++.|||++
T Consensus        20 ~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~   99 (313)
T KOG0198|consen   20 SKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAP   99 (313)
T ss_pred             hhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccC
Confidence            45678999999999999876  688899977532  1245688999999999999999999974 22 3 6999999999


Q ss_pred             CCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.+++.+.+ .++++.++.+.+|++.+|
T Consensus       100 ~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL  130 (313)
T KOG0198|consen  100 GGSLSDLIKRYGGKLPEPLVRRYTRQILEGL  130 (313)
T ss_pred             CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            999999999876 689999999999999876

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.67  E-value=5.6e-16  Score=92.48  Aligned_cols=104  Identities=23%  Similarity=0.342  Sum_probs=88.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--------HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--------AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |+..+.||+|++|.+|.+...  +..+++|.+...        .....+.+|+..++.++|+|++++.+.+ ..+..+++
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence            678899999999999998765  778999987521        1245678899999999999999999998 45789999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +||+++++|.+++...+.+++.....++.|++.|+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al  116 (268)
T cd06630          82 VEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGL  116 (268)
T ss_pred             EeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence            99999999999998877788888889999998876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.67  E-value=1.7e-15  Score=90.50  Aligned_cols=104  Identities=24%  Similarity=0.278  Sum_probs=87.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |++.+.||+|+||.||++...  +..+++|.+...  .....+.+|+..+..++|+|++++.+.+ ..+..++++||+++
T Consensus        11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~   90 (267)
T cd06646          11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGG   90 (267)
T ss_pred             cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCC
Confidence            788899999999999999875  678889987532  2334567889999999999999999988 45778999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.++++....+++..+..++.|++.|+
T Consensus        91 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l  119 (267)
T cd06646          91 GSLQDIYHVTGPLSELQIAYVCRETLQGL  119 (267)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999998777778888888888888765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0589|consensus

Probab=99.66  E-value=1.3e-16  Score=99.84  Aligned_cols=104  Identities=27%  Similarity=0.390  Sum_probs=87.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ec-CceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TG-NPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~lv~e~   73 (106)
                      |..++.+|+|+||.++...++  +..+++|.|+.    ...++....|+.++.++.|||++...+.| .. ...+|+|+|
T Consensus         6 Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y   85 (426)
T KOG0589|consen    6 YEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEY   85 (426)
T ss_pred             hhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEee
Confidence            677899999999999877665  67899998862    23456788999999999999999999999 34 449999999


Q ss_pred             cCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||++.+.+...  ..++++....|+-|++.|+
T Consensus        86 ~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av  119 (426)
T KOG0589|consen   86 CEGGDLAQLIKEQKGVLFPEERILKWFVQILLAV  119 (426)
T ss_pred             cCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence            9999999999764  4688998899999998875

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.66  E-value=2.5e-15  Score=92.59  Aligned_cols=104  Identities=26%  Similarity=0.303  Sum_probs=86.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |++.+.||+|+||.||.+...  +..+++|.+....     ....+.+|..++...+|++++++.+.+. .+..+++|||
T Consensus         3 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey   82 (332)
T cd05623           3 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDY   82 (332)
T ss_pred             ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEec
Confidence            778899999999999999876  6778999885321     2234667888888899999999998884 5779999999


Q ss_pred             cCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++.+ ...+++..++.++.|++.|+
T Consensus        83 ~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al  115 (332)
T cd05623          83 YVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAI  115 (332)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999987 35678888889999988775

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.66  E-value=1.6e-15  Score=94.75  Aligned_cols=103  Identities=24%  Similarity=0.312  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |++.+.||+|+||.||.+.+.  +..+++|.+....     ....+.+|..++..++|||++++.+.+ ..+..+++|||
T Consensus        45 y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey  124 (371)
T cd05622          45 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY  124 (371)
T ss_pred             cEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcC
Confidence            677899999999999999886  6789999885321     234466788889999999999999888 45779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++... .+++..++.++.|++.||
T Consensus       125 ~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL  155 (371)
T cd05622         125 MPGGDLVNLMSNY-DVPEKWARFYTAEVVLAL  155 (371)
T ss_pred             CCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHH
Confidence            9999999998764 477888888999998775

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.65  E-value=1.8e-15  Score=92.86  Aligned_cols=101  Identities=28%  Similarity=0.391  Sum_probs=83.8

Q ss_pred             ceeEeecCcceEEEEEEC-----CceEEEEEecCHH------HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           5 SKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETEA------ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      ++.||+|+||.||++...     +..+++|.+....      ....+.+|+.++..++|||++++.+.+ ..+..+++||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            367999999999998752     5789999886321      223466789999999999999999888 4577999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++++|.+++...+.+++..+..++.|++.||
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l  113 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYLSEISLAL  113 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999998877788888888999988775

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=3e-15  Score=90.46  Aligned_cols=104  Identities=21%  Similarity=0.267  Sum_probs=85.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+..+.||+|+||.||.+...  +..+++|.+....     ....+.+|+.++..++|+|++++.+.+ .++..+++|||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            778899999999999998875  6789999885321     123466799999999999999999888 45789999999


Q ss_pred             cCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+|+|.+++...  ..++++.+..++.|++.|+
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l  115 (285)
T cd05605          82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGL  115 (285)
T ss_pred             cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHH
Confidence            9999999888653  3577888888888988765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.65  E-value=4.1e-15  Score=88.38  Aligned_cols=104  Identities=31%  Similarity=0.459  Sum_probs=89.3

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHH-HHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAE-RKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l   79 (106)
                      |...+.+|+|++|.||.+...+..+++|.+..... .+.+.+|+.++..++|+|++++.+.+. .+..+++|||+++++|
T Consensus         8 ~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L   87 (256)
T cd05039           8 LKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSL   87 (256)
T ss_pred             ccceeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcH
Confidence            67788999999999999988899999999875433 567888999999999999999999884 5779999999999999


Q ss_pred             HHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .++++...  .++......++.|++.|+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~qi~~~l  115 (256)
T cd05039          88 VDYLRSRGRAVITLAQQLGFALDVCEGM  115 (256)
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            99998654  577888888888888765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.65  E-value=2.8e-15  Score=90.71  Aligned_cols=104  Identities=28%  Similarity=0.440  Sum_probs=88.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+..+.||+|++|.||.+.+.  +..+++|.+...     .....+.+|+.+++.++|||++++.+.+ ..+..+++|||
T Consensus         3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (290)
T cd05580           3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEY   82 (290)
T ss_pred             eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEec
Confidence            677899999999999999876  688999988532     2235577899999999999999999988 45779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++...+.+++.....++.|++.||
T Consensus        83 ~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l  114 (290)
T cd05580          83 VPGGELFSHLRKSGRFPEPVARFYAAQVVLAL  114 (290)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998888888888888999988775

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.65  E-value=4.5e-15  Score=88.59  Aligned_cols=104  Identities=30%  Similarity=0.497  Sum_probs=87.2

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH--------HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE--------AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~   71 (106)
                      |...+.||+|+||.||.+... +..+++|.+...        .....+.+|+..+..++|+|++++.+.+. .+..++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            778899999999999998775 778899977521        11245778999999999999999999984 57799999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++++|.+++.+..+++++.+..++.|++.|+
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l  115 (265)
T cd06631          82 EFVPGGSISSILNRFGPLPEPVFCKYTKQILDGV  115 (265)
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999998877788888888888888765

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.65  E-value=3.8e-15  Score=91.46  Aligned_cols=104  Identities=22%  Similarity=0.311  Sum_probs=85.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCC-ceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHP-NIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~-~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...     .....+..|..++..+.|+ +++.+.+.+ ..+..+++||
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME   81 (324)
T ss_pred             ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence            788899999999999999876  578999988632     2234566777888888765 577788777 4577999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++.....+++..+..++.|++.||
T Consensus        82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al  114 (324)
T cd05587          82 YVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGL  114 (324)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999998877788888899999998875

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.64  E-value=1.4e-15  Score=90.75  Aligned_cols=102  Identities=38%  Similarity=0.588  Sum_probs=82.8

Q ss_pred             CceeEeecCcceEEEEEEC------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      ..+.||.|+||.|+++.+.      +..+++|.++..   .....+.+|+..+..++|||++++.+.+. .+..++++||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4578999999999999876      567899998532   33577889999999999999999999995 5779999999


Q ss_pred             cCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++...  ..++......++.|+..|+
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l  116 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEAL  116 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccc
Confidence            9999999999886  5677777778888887765

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.64  E-value=4.9e-15  Score=89.51  Aligned_cols=104  Identities=22%  Similarity=0.283  Sum_probs=84.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+..+.||+|+||.||.+...  +..+++|.+....     ....+.+|+.++..+.|++++++.+.+ ..+..++++||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            667889999999999999875  7889999885321     123467899999999999999999888 45779999999


Q ss_pred             cCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++...  ..+++..+..++.|++.|+
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l  115 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGL  115 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Confidence            9999998888643  3477778888888888765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.64  E-value=1.5e-15  Score=91.65  Aligned_cols=104  Identities=24%  Similarity=0.311  Sum_probs=85.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |++.+.||+|+||.||++.++  +..+++|.+...    .....+.+|+.++..++|+|++++.+.+ ..+..+++|||+
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (287)
T cd07848           3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYV   82 (287)
T ss_pred             ceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecC
Confidence            788899999999999999886  678999987532    2245677899999999999999999888 457799999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++.+..+......+++..+..++.|++.|+
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L  113 (287)
T cd07848          83 EKNMLELLEEMPNGVPPEKVRSYIYQLIKAI  113 (287)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9877766555555678888889999998775

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.64  E-value=4.5e-15  Score=91.31  Aligned_cols=103  Identities=19%  Similarity=0.344  Sum_probs=86.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec------CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG------NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~l   69 (106)
                      |++.+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|||++++.+.+..      ...++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            788899999999999999876  788999988532    233457789999999999999999988721      24899


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+. ++|.+++.....++++.+..++.|++.||
T Consensus        82 v~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL  116 (338)
T cd07859          82 VFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRAL  116 (338)
T ss_pred             EEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHH
Confidence            999995 58999998877788999999999998876

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.64  E-value=5.3e-15  Score=91.09  Aligned_cols=100  Identities=21%  Similarity=0.342  Sum_probs=82.8

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||.+...  +..+++|.+...     .....+.+|..++..+ +|||++++.+.+ ..+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46899999999999876  678999988632     2234566777777665 799999999988 45789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|..++.....+++..++.++.|++.|+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l  109 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLAL  109 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877888999999999998775

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.63  E-value=6.9e-15  Score=89.57  Aligned_cols=104  Identities=24%  Similarity=0.410  Sum_probs=87.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |...+.+|+|+|+.||.+...  +..+++|.+....     ....+.+|+.++..++|+|++++++.+. .++.+++|||
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (305)
T cd05609           3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEY   82 (305)
T ss_pred             ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEec
Confidence            678899999999999999876  6789999876321     2345778889999999999999998884 4678999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|++|.+++...+.+++..+..++.|++.|+
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l  114 (305)
T cd05609          83 VEGGDCATLLKNIGALPVDMARMYFAETVLAL  114 (305)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998877788888888888887664

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG1094|consensus

Probab=99.63  E-value=4.1e-16  Score=100.25  Aligned_cols=102  Identities=31%  Similarity=0.469  Sum_probs=84.4

Q ss_pred             CCceeEeecCcceEEEEEEC-CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      .+.++||+|.||.|..|... +..+|+|.++..   ..+.++..|+.+|.+++||||+.+.++| .++++++++||+++|
T Consensus       541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnG  620 (807)
T KOG1094|consen  541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENG  620 (807)
T ss_pred             ehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcC
Confidence            35688999999999999877 589999998754   3357899999999999999999999999 568899999999999


Q ss_pred             ChHHHHhcCCCCc--hhhhhhhhhccccC
Q psy9377          78 SLYNELQRSSAAS--LKFCKIYLPFWFSS  104 (106)
Q Consensus        78 ~l~~~l~~~~~~~--~~~~~~~~~qll~~  104 (106)
                      +|-+++.++....  ....-.++.||.++
T Consensus       621 DLnqFl~aheapt~~t~~~vsi~tqiasg  649 (807)
T KOG1094|consen  621 DLNQFLSAHELPTAETAPGVSICTQIASG  649 (807)
T ss_pred             cHHHHHHhccCcccccchhHHHHHHHHHH
Confidence            9999999875433  23334577777655

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.63  E-value=6.4e-15  Score=90.47  Aligned_cols=100  Identities=30%  Similarity=0.472  Sum_probs=81.0

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHH-HHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVR-QLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~-~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||++.+.  +..+++|.+....     ....+..|.. ++..++|||++++.+.+ ..+..+++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            46899999999999886  7889999886332     1233444443 45678999999999888 45779999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.++++..+.+++..+..++.|++.||
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l  109 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASAL  109 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877888888889999998875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.63  E-value=4.6e-15  Score=98.62  Aligned_cols=104  Identities=27%  Similarity=0.292  Sum_probs=89.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|.||.||.+.+.  +..+++|.++..     .....+..|+.++..++|++++++++.+ ..+..++||||
T Consensus         6 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy   85 (669)
T cd05610           6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEY   85 (669)
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeC
Confidence            677899999999999999887  788999988632     2235677888899999999999999887 45789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++|.+++...+.+++..++.++.|++.||
T Consensus        86 ~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL  117 (669)
T cd05610          86 LIGGDVKSLLHIYGYFDEEMAVKYISEVALAL  117 (669)
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998777788888899999998875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.63  E-value=8.3e-15  Score=90.15  Aligned_cols=100  Identities=23%  Similarity=0.351  Sum_probs=83.5

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||.+...  +..+++|.+....     ....+..|..++..+ .|++++.+.+.+ ..+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            46899999999999876  6789999886431     234567788887777 699999999988 45789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|..++...+.+++..+..++.|++.|+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al  109 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIAL  109 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877889999999999998875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.63  E-value=6.6e-15  Score=87.34  Aligned_cols=104  Identities=26%  Similarity=0.456  Sum_probs=86.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-------HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-------AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~   71 (106)
                      |...+.||+|++|.||++...  +..+++|.+...       ...+.+.+|+.++..++|+|++++.+.+. ....++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            778899999999999999875  678999977422       23456788999999999999999999884 47799999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++++|.+++.+...++......++.|++.|+
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l  115 (258)
T cd06632          82 ELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGL  115 (258)
T ss_pred             EecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999998876677788788888887764

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.63  E-value=5.3e-15  Score=90.63  Aligned_cols=100  Identities=27%  Similarity=0.437  Sum_probs=80.1

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhc-CCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSR-VSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||.+.+.  +..+++|.++...     .......|..++.. .+|||++++.+.+ ..+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46899999999999876  6789999886421     22334445555554 4799999999888 45779999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|..++.....+++..+..++.|++.||
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al  109 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGL  109 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877788888899999998875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.63  E-value=5.3e-15  Score=90.84  Aligned_cols=103  Identities=26%  Similarity=0.436  Sum_probs=82.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHH---hcCCCCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQL---SRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~---~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |.+.+.||+|++|.||.+.+.  +..+++|.++...     ....+.+|..++   ..++|||++++.+.+ ..+..+++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            678899999999999999876  7889999986332     223455555544   456799999999988 45789999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|..++.. ..+++..+..++.|++.|+
T Consensus        81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al  114 (324)
T cd05589          81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGL  114 (324)
T ss_pred             EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHH
Confidence            999999999988865 3578888899999998875

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.63  E-value=7e-15  Score=90.51  Aligned_cols=104  Identities=22%  Similarity=0.288  Sum_probs=86.1

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCHH------HHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETEA------ERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~~------~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~   68 (106)
                      |++.+.||+|+||.||.+...     +..+++|.+....      .......|+.++..+ .|++++++.+.+. .+..+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            788899999999999988653     5789999885321      234566788888888 4899999998884 57789


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+.+|+|.+++.....++++.+..++.|++.||
T Consensus        82 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l  118 (332)
T cd05614          82 LILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILAL  118 (332)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999998877788999999999998775

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.63  E-value=6e-15  Score=90.46  Aligned_cols=100  Identities=27%  Similarity=0.407  Sum_probs=82.5

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||.+.+.  +..+++|.++..     ........|..++..+ .|||++++.+.+ ..+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46899999999999876  678999988632     1233456677777766 699999999988 45789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|..++.....+++..+..++.|++.||
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l  109 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGL  109 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877788999999999998875

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.63  E-value=5e-15  Score=89.58  Aligned_cols=103  Identities=26%  Similarity=0.335  Sum_probs=84.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      |...+.||+|+||.||++...  +..+++|.++..   .....+.+|+.++..++|+|++++.+.+. .+..+++|||++
T Consensus         7 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   86 (288)
T cd07871           7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD   86 (288)
T ss_pred             ceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC
Confidence            778899999999999999876  678999988532   12345678999999999999999999884 467899999997


Q ss_pred             CCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      + +|.+++.... .++...+..++.|++.||
T Consensus        87 ~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL  116 (288)
T cd07871          87 S-DLKQYLDNCGNLMSMHNVKIFMFQLLRGL  116 (288)
T ss_pred             c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            5 8999987654 467788888999998875

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.62  E-value=7.2e-15  Score=90.12  Aligned_cols=100  Identities=27%  Similarity=0.430  Sum_probs=80.8

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHH-HHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVR-QLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~-~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||++.+.  +..+++|.+....     ....+..|.. ++..++|+|++++.+.+ ..+..+++|||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46899999999999886  6789999886332     1233444443 56778999999999888 45789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|...+.....+++..+..++.|++.||
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L  109 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAI  109 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877788888889999998875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.62  E-value=7e-15  Score=90.13  Aligned_cols=100  Identities=30%  Similarity=0.473  Sum_probs=80.7

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhc-CCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSR-VSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||.+.+.  +..+++|.++...     .......|..++.. .+|||++++.+.+ ..+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            46899999999999876  6789999886431     22344556666665 5899999999988 45779999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++.....++...+..++.|++.|+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al  109 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGL  109 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877788888889999988775

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.62  E-value=4.9e-15  Score=100.85  Aligned_cols=104  Identities=20%  Similarity=0.320  Sum_probs=86.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv~e   72 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+..    ......+..|+.++..++|||++++++.|.   ...++++||
T Consensus        15 YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVME   94 (1021)
T PTZ00266         15 YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILME   94 (1021)
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEe
Confidence            678899999999999999887  66788888752    233456788999999999999999999883   256899999


Q ss_pred             ecCCCChHHHHhcC----CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS----SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~----~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++...    ..+++..+..++.||+.||
T Consensus        95 Y~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~AL  131 (1021)
T PTZ00266         95 FCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHAL  131 (1021)
T ss_pred             CCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            99999999999752    4578888889999998876

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.62  E-value=2.9e-15  Score=90.32  Aligned_cols=104  Identities=23%  Similarity=0.294  Sum_probs=86.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |++.+.||+|++|.||.+...  +..+++|.+..   ......+.+|+.++..++|+|++++.+.+ ..+..++++||++
T Consensus         7 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (284)
T cd06620           7 LETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMD   86 (284)
T ss_pred             HHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCC
Confidence            567789999999999998876  77888887642   23356788899999999999999999988 4578999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++...+.++...+..++.|++.++
T Consensus        87 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l  116 (284)
T cd06620          87 CGSLDRIYKKGGPIPVEILGKIAVAVVEGL  116 (284)
T ss_pred             CCCHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence            999999998877788888888888877654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=4.2e-15  Score=89.41  Aligned_cols=104  Identities=29%  Similarity=0.411  Sum_probs=87.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC--HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |.+.+.||+|++|.||.+...  +..+++|.+..  ......+..|+.++..++|+|++++.+.+ .++..+++|||+++
T Consensus         7 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   86 (280)
T cd06611           7 WEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDG   86 (280)
T ss_pred             HHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCC
Confidence            567788999999999999875  67889898753  23445677899999999999999999988 45779999999999


Q ss_pred             CChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++... ..+++..+..++.|++.++
T Consensus        87 ~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l  116 (280)
T cd06611          87 GALDSIMLELERGLTEPQIRYVCRQMLEAL  116 (280)
T ss_pred             CcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999998764 4688888899999988765

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.62  E-value=5e-15  Score=90.88  Aligned_cols=100  Identities=26%  Similarity=0.413  Sum_probs=82.0

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||.+.+.  +..+++|.+....     .......|..++..+ .|||++++.+.+. .+..+++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            36899999999999876  6789999886331     233455677777665 6999999999884 5779999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++.....+++..+..++.|++.|+
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L  109 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSAL  109 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877888999999999998775

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.62  E-value=4.3e-15  Score=88.25  Aligned_cols=104  Identities=30%  Similarity=0.409  Sum_probs=86.5

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCChHH
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYN   81 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l~~   81 (106)
                      |++.+.||+|+||.||.+...+..+++|.++.......+.+|+.++..++|+|++++.+.+..+..+++|||+.+++|.+
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~   87 (254)
T cd05083           8 LTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNLVN   87 (254)
T ss_pred             ceeeeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCHHH
Confidence            67789999999999999877788899998865444567888999999999999999999887677899999999999999


Q ss_pred             HHhcCC--CCchhhhhhhhhccccCC
Q psy9377          82 ELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        82 ~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      ++....  .++......++.|++.|+
T Consensus        88 ~l~~~~~~~~~~~~~~~~~~qi~~al  113 (254)
T cd05083          88 FLRTRGRALVSVIQLLQFSLDVAEGM  113 (254)
T ss_pred             HHHhcCcCCCCHHHHHHHHHHHHHHH
Confidence            997643  356666677788887664

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.62  E-value=8.5e-15  Score=89.98  Aligned_cols=100  Identities=28%  Similarity=0.422  Sum_probs=81.1

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHH-HHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVR-QLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~-~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||.+.+.  +..+++|.+....     ....+..|.. ++..++|||++++.+.+ ..+..+++|||+.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46899999999999876  7889999886331     2233444443 46678999999999888 45789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|..++.....+++..+..++.|++.||
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al  109 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASAL  109 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877888999999999998875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG4236|consensus

Probab=99.62  E-value=1.2e-15  Score=97.61  Aligned_cols=100  Identities=28%  Similarity=0.368  Sum_probs=85.1

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      ++||+|.||.||-++++  |+.+++|.|++.    .....+.+|+.+++.+.||.++.+..+| +++.+++|||-+.|..
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDM  649 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDM  649 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchH
Confidence            67999999999998877  899999999632    2345678999999999999999999999 5688999999998766


Q ss_pred             hHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+..+.. .+.+++...++++.|||.||
T Consensus       650 LEMILSsEkgRL~er~TkFlvtQIL~AL  677 (888)
T KOG4236|consen  650 LEMILSSEKGRLPERITKFLVTQILVAL  677 (888)
T ss_pred             HHHHHHhhcccchHHHHHHHHHHHHHHH
Confidence            6666654 56799999999999999886

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.62  E-value=6.2e-15  Score=87.65  Aligned_cols=104  Identities=32%  Similarity=0.519  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |++.+.||+|+||.||.+... +..+++|.+... .....+.+|+..++.++|||++++++.+ ..+..+++|||+++|+
T Consensus         6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~   85 (256)
T cd05114           6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGC   85 (256)
T ss_pred             cEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCc
Confidence            567788999999999999876 567888877532 2345678899999999999999999988 4577999999999999


Q ss_pred             hHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++... ..++.+....++.|++.|+
T Consensus        86 L~~~~~~~~~~~~~~~~~~~~~~i~~~l  113 (256)
T cd05114          86 LLNYLRQRQGKLSKDMLLSMCQDVCEGM  113 (256)
T ss_pred             HHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence            99999753 3466777778888887664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.62  E-value=6.6e-15  Score=90.32  Aligned_cols=100  Identities=25%  Similarity=0.370  Sum_probs=81.8

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||.+.+.  +..+++|.+....     .......|..++..+ +||+++++.+.+. .+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            36899999999999876  6789999886421     223455677777655 7999999999984 5779999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|..++.....+++..+..++.|++.||
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL  109 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLAL  109 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877788888889999998775

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.62  E-value=1.2e-14  Score=88.41  Aligned_cols=104  Identities=33%  Similarity=0.444  Sum_probs=80.5

Q ss_pred             CCCceeEeecCcceEEEEEEC------------------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ------------------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYG   60 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~------------------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~   60 (106)
                      |...+.||+|+||.||.+.+.                  +..+++|.+...   .....+.+|+.++..++|||++++.+
T Consensus         7 ~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~   86 (304)
T cd05096           7 LLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLG   86 (304)
T ss_pred             CeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEE
Confidence            677889999999999998643                  235888987532   23456888999999999999999999


Q ss_pred             eEe-cCceEEEEeecCCCChHHHHhcCC-------------------CCchhhhhhhhhccccCC
Q psy9377          61 ACT-GNPVCLVMEYAEGGSLYNELQRSS-------------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        61 ~~~-~~~~~lv~e~~~~g~l~~~l~~~~-------------------~~~~~~~~~~~~qll~~~  105 (106)
                      .+. .+..+++|||+.+|+|.+++....                   .++......++.|++.|+
T Consensus        87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al  151 (304)
T cd05096          87 VCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGM  151 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence            984 577999999999999999986532                   123344556777777664

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.62  E-value=5.2e-15  Score=90.05  Aligned_cols=103  Identities=23%  Similarity=0.314  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |.+.+.||+|+||.||.+...  +..+++|.+...   .......+|+.+++.++|||++++.+.+ .....+++|||+.
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   86 (303)
T cd07869           7 YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH   86 (303)
T ss_pred             ceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC
Confidence            778899999999999999886  778999988632   1233567899999999999999999988 4577999999996


Q ss_pred             CCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                       +++.+++... +.++...++.++.|++.|+
T Consensus        87 -~~l~~~~~~~~~~~~~~~~~~~~~qi~~al  116 (303)
T cd07869          87 -TDLCQYMDKHPGGLHPENVKLFLFQLLRGL  116 (303)
T ss_pred             -cCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence             5788887654 4577888899999998876

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.62  E-value=2e-15  Score=89.65  Aligned_cols=104  Identities=33%  Similarity=0.407  Sum_probs=87.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHH----HHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE----RKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|+||.||++...  +..+++|.+.....    .....+|+..+..++|+|++++.+.+ .....+++||++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            567889999999999999987  56899999874422    22334588889999999999999998 567899999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++|.+++.....++...+..++.|++.||
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L  111 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEAL  111 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccc
Confidence            9999999999767788888899999998765

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.62  E-value=2.6e-15  Score=89.33  Aligned_cols=104  Identities=22%  Similarity=0.297  Sum_probs=88.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |++.+.||+|+++.||.+.+.  +..+++|.+...     .....+.+|+..+..++|||++++.+.+ ..+..++++||
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL   81 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence            778899999999999999876  788999988532     2345678899999999999999998888 45779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++|.+++.....+++..+..++.|++.|+
T Consensus        82 ~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l  113 (258)
T cd05578          82 LLGGDLRYHLSQKVKFSEEQVKFWICEIVLAL  113 (258)
T ss_pred             CCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHH
Confidence            99999999998776788888899999998775

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0667|consensus

Probab=99.62  E-value=1.9e-15  Score=97.30  Aligned_cols=103  Identities=24%  Similarity=0.381  Sum_probs=88.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCC------CCceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVS------HPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~------~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      |.+.+.||+|+||.|-+|.+.  ++.||+|+++.. ......+.|+.++..++      .-|++++.+.| ..++.|+|+
T Consensus       188 Y~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVf  267 (586)
T KOG0667|consen  188 YEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVF  267 (586)
T ss_pred             EEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeee
Confidence            678999999999999999887  789999999744 44566778898888875      23899999999 679999999


Q ss_pred             eecCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      |++.. +|+++++.++  +++...++.+++|++.||
T Consensus       268 ELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L  302 (586)
T KOG0667|consen  268 ELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTAL  302 (586)
T ss_pred             hhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            99965 9999999764  678899999999999876

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.62  E-value=8.9e-15  Score=89.89  Aligned_cols=104  Identities=21%  Similarity=0.294  Sum_probs=84.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCC-CCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVS-HPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |+..+.||+|+||.||.+.+.  +..+++|.++...     .......|..++..+. |++++++.+.+. .+..+++||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            677899999999999999876  7789999886321     2234566777777775 467778888774 477999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++.....+++..+..++.|++.|+
T Consensus        82 y~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al  114 (323)
T cd05615          82 YVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGL  114 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999998877888999999999998875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=1.5e-14  Score=86.11  Aligned_cols=104  Identities=28%  Similarity=0.449  Sum_probs=87.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-------HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-------AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      |...+.||+|++|.||.+...  +..+++|.+...       .....+.+|+.++..++|||++++.+.+ ..+..++++
T Consensus         4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   83 (263)
T cd06625           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM   83 (263)
T ss_pred             ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence            677899999999999999765  688999977521       1234577899999999999999999988 457899999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |++++++|.+++.....++...+..++.|++.|+
T Consensus        84 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  117 (263)
T cd06625          84 EYMPGGSVKDQLKAYGALTETVTRKYTRQILEGV  117 (263)
T ss_pred             EECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence            9999999999998877788888888999888765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PHA02988 hypothetical protein; Provisional

Probab=99.61  E-value=2.4e-14  Score=86.61  Aligned_cols=100  Identities=20%  Similarity=0.298  Sum_probs=82.4

Q ss_pred             eeEeecCcceEEEEEECCceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEec-----CceEEEEeecC
Q psy9377           6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACTG-----NPVCLVMEYAE   75 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~lv~e~~~   75 (106)
                      ..+++|+++.||++.+.+..+++|.++...     ..+.+.+|+.++..++|||++++.+.+..     ...+++|||++
T Consensus        26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~  105 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT  105 (283)
T ss_pred             eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence            578999999999999999999999886321     13567789999999999999999998732     46899999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.+++...+.++......++.|++.|+
T Consensus       106 ~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l  135 (283)
T PHA02988        106 RGYLREVLDKEKDLSFKTKLDMAIDCCKGL  135 (283)
T ss_pred             CCcHHHHHhhCCCCChhHHHHHHHHHHHHH
Confidence            999999998877677777777777776554

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.61  E-value=8.2e-15  Score=92.48  Aligned_cols=85  Identities=38%  Similarity=0.598  Sum_probs=70.1

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCC-CCceeeeeeeEe-cCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVS-HPNIVKLYGACT-GNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~~l   69 (106)
                      |.+.+.||+|+||.||++.+.       +..+++|.+...   ...+.+.+|+.++..+. |||++++.+.+. .+..++
T Consensus        39 ~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~l  118 (400)
T cd05105          39 LVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYI  118 (400)
T ss_pred             eehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEE
Confidence            457789999999999998753       236899988532   23457889999999996 999999999994 578999


Q ss_pred             EEeecCCCChHHHHhcC
Q psy9377          70 VMEYAEGGSLYNELQRS   86 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~   86 (106)
                      +|||+++|+|.+++..+
T Consensus       119 v~Ey~~~g~L~~~l~~~  135 (400)
T cd05105         119 ITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             EEEecCCCcHHHHHHHh
Confidence            99999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.61  E-value=4.6e-15  Score=88.63  Aligned_cols=104  Identities=21%  Similarity=0.294  Sum_probs=86.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |+..+.||+|++|.+|.+.+.  +..+++|.++..  .....+.+|+.++..++|||++++.+.+ ..+..++++||+++
T Consensus        11 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~   90 (267)
T cd06645          11 FELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGG   90 (267)
T ss_pred             HHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Confidence            456678999999999999875  678899887532  2334567888899999999999999988 56889999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++...+.+++.....++.|++.++
T Consensus        91 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~l  119 (267)
T cd06645          91 GSLQDIYHVTGPLSESQIAYVSRETLQGL  119 (267)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877788888889988888765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.61  E-value=1.1e-14  Score=86.43  Aligned_cols=100  Identities=32%  Similarity=0.492  Sum_probs=82.2

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCCh
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l   79 (106)
                      +.||+|+||.||++...  +..+++|.+..   ......+.+|+.++..++|+|++++.+.+ .....++++||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            36899999999999875  77889997652   23456688899999999999999999988 45779999999999999


Q ss_pred             HHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      .++++... .+++..+..++.|++.||
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L  107 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGM  107 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            99997644 467777788888888765

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.61  E-value=1e-14  Score=89.38  Aligned_cols=100  Identities=27%  Similarity=0.420  Sum_probs=81.3

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhc-CCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSR-VSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||.+.+.  +..+++|.++...     .......|..++.. .+|++++++.+.+ ..+..+++|||+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46899999999999886  6789999886431     22344556666654 4899999999988 45789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|..++..+..+++..+..++.|++.||
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l  109 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGL  109 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877788888889999998775

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.61  E-value=1.3e-14  Score=89.15  Aligned_cols=100  Identities=30%  Similarity=0.455  Sum_probs=79.9

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHH-HHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVR-QLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~-~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||++.+.  +..+++|.+....     ....+..|.. ++..++|+|++++.+.+ ..+..+++|||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            46899999999999876  6779999886432     1223333433 45678999999999888 45779999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++.....+++..++.++.|++.||
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L  109 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASAL  109 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877788888888999998875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.61  E-value=1.2e-14  Score=86.64  Aligned_cols=104  Identities=28%  Similarity=0.486  Sum_probs=85.9

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      |.+.+.||+|+||.||.+... +..+++|.+... .....+.+|+.++..++|+|++++.+.+..+..++++|++++++|
T Consensus         8 ~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L   87 (260)
T cd05067           8 LKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENGSL   87 (260)
T ss_pred             ceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCCCCH
Confidence            677899999999999999876 678999988643 234567889999999999999999988877789999999999999


Q ss_pred             HHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .+++....  .++.+....++.|++.||
T Consensus        88 ~~~~~~~~~~~~~~~~~~~i~~~i~~al  115 (260)
T cd05067          88 VDFLKTPEGIKLTINKLIDMAAQIAEGM  115 (260)
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            99987533  466677777888888765

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.61  E-value=2.4e-14  Score=85.03  Aligned_cols=105  Identities=30%  Similarity=0.415  Sum_probs=85.6

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      .|+..+.+|+|++|.++.+...  +..+++|.+..    ......+.+|+.+++.++|+|++++.+.+ ..+..++++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            3788999999999998887765  67888887652    23345678899999999999999999998 45778999999


Q ss_pred             cCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++...  ..++......++.|++.++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l  114 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAV  114 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence            9999999999764  3467777788888887654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.60  E-value=3.1e-14  Score=85.59  Aligned_cols=104  Identities=27%  Similarity=0.431  Sum_probs=85.0

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      +|+..+.||+|+||.||++.+.  +..+++|.+...   .....+.+|+..+..++|+|++++.+.+. .+..++++||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            4778899999999999999775  678899987532   23456778999999999999999999884 57799999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++.+++... .++...+..++.|++.++
T Consensus        85 ~~~~l~~~i~~~-~~~~~~~~~~~~~l~~~l  114 (277)
T cd06641          85 GGGSALDLLEPG-PLDETQIATILREILKGL  114 (277)
T ss_pred             CCCcHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence            999999998754 466777778888887654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0585|consensus

Probab=99.60  E-value=3e-15  Score=94.19  Aligned_cols=103  Identities=22%  Similarity=0.269  Sum_probs=85.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----------------HHHHHHHHHHHHhcCCCCceeeeeeeEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----------------ERKAFAVEVRQLSRVSHPNIVKLYGACT   63 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~   63 (106)
                      |.+.+.||+|.||.|..+...  +..||+|++++..                ..+.+.+|+.+++++.|+|+++++++.+
T Consensus        99 y~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLD  178 (576)
T KOG0585|consen   99 YELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLD  178 (576)
T ss_pred             eehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeec
Confidence            778899999999999999876  7889999986321                1246889999999999999999999994


Q ss_pred             c---CceEEEEeecCCCChHHHHhcCCC-CchhhhhhhhhccccCC
Q psy9377          64 G---NPVCLVMEYAEGGSLYNELQRSSA-ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        64 ~---~~~~lv~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~qll~~~  105 (106)
                      +   +.+|+|+|||..|.+. |.....+ +++..|+.|++.++.+|
T Consensus       179 DP~s~~~YlVley~s~G~v~-w~p~d~~els~~~Ar~ylrDvv~GL  223 (576)
T KOG0585|consen  179 DPESDKLYLVLEYCSKGEVK-WCPPDKPELSEQQARKYLRDVVLGL  223 (576)
T ss_pred             CcccCceEEEEEeccCCccc-cCCCCcccccHHHHHHHHHHHHHHH
Confidence            3   6799999999998875 5544444 88999999999888765

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.60  E-value=2.2e-14  Score=88.12  Aligned_cols=105  Identities=21%  Similarity=0.291  Sum_probs=84.0

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEE
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVM   71 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~   71 (106)
                      .|.+.+.||+|+||.||++.+.  +..+++|.++...     .......|..++..+ .|++++.+.+.+. .+..+++|
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            3788899999999999999877  5789999886331     123345566666665 5788888888884 47799999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++|+|.+++.....+++..+..++.|++.||
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL  114 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGL  114 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999998877788888899999988775

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.60  E-value=1.7e-14  Score=92.74  Aligned_cols=104  Identities=17%  Similarity=0.209  Sum_probs=83.3

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEEecC--HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |...+.+|+|++|.||.+...   +..+++|.+..  ......+.+|+.++..++|||++++++.+ ..+..+++|||++
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            567789999999999998765   45677776532  23344567899999999999999999998 5588999999999


Q ss_pred             CCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.+++..    ..++++..+..++.|++.||
T Consensus       149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL  182 (478)
T PTZ00267        149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLAL  182 (478)
T ss_pred             CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            9999988754    33577778888888888765

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.60  E-value=1.5e-14  Score=88.91  Aligned_cols=102  Identities=20%  Similarity=0.207  Sum_probs=83.1

Q ss_pred             CceeEeec--CcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           4 GSKIVGQG--AFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         4 ~~~~lg~g--~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      ..+.||+|  +|+.||.+..+  +..+++|.++..    .....+.+|+.+++.++|||++++.+.+ ..+..++++||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45789999  67889998776  788999988632    2345677899999999999999999988 557899999999


Q ss_pred             CCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|++.+++..+  ..+++..+..++.|++.||
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L  114 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKAL  114 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            999999999753  3477788888899888765

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0584|consensus

Probab=99.60  E-value=8.8e-16  Score=98.69  Aligned_cols=101  Identities=22%  Similarity=0.380  Sum_probs=86.2

Q ss_pred             ceeEeecCcceEEEEEEC--CceEEEEEec------CHHHHHHHHHHHHHHhcCCCCceeeeeeeEe-c--CceEEEEee
Q psy9377           5 SKIVGQGAFGVVWKGLWQ--NQYVAVKHIE------TEAERKAFAVEVRQLSRVSHPNIVKLYGACT-G--NPVCLVMEY   73 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~--~~~~~~k~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--~~~~lv~e~   73 (106)
                      ...||+|+|.+||++.+.  |..||...++      .+...+.+..|+.+++.++|+||+++++.|. .  ....+|+|+
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            467999999999999887  6677766553      3344578899999999999999999998883 2  458899999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +..|+|.+|+++.+....+..+.|++|||.+|
T Consensus       125 ~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL  156 (632)
T KOG0584|consen  125 FTSGTLREYRKKHRRVNIKAIKSWCRQILKGL  156 (632)
T ss_pred             ccCCcHHHHHHHhccCCHHHHHHHHHHHHHHh
Confidence            99999999999988888899999999999876

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.60  E-value=7.6e-15  Score=90.51  Aligned_cols=85  Identities=36%  Similarity=0.565  Sum_probs=69.4

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe--cCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT--GNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~--~~~~~   68 (106)
                      |.+.+.||+|+||.||++.+.       +..+++|.+...   .....+.+|+.++..+ +|||++++++.+.  .+..+
T Consensus         9 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~   88 (338)
T cd05102           9 LRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLM   88 (338)
T ss_pred             ceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceE
Confidence            677899999999999998642       356899987532   2345688899999998 8999999999884  35689


Q ss_pred             EEEeecCCCChHHHHhcC
Q psy9377          69 LVMEYAEGGSLYNELQRS   86 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~   86 (106)
                      ++|||+++|+|.+++...
T Consensus        89 lv~ey~~~g~L~~~l~~~  106 (338)
T cd05102          89 VIVEFCKYGNLSNFLRAK  106 (338)
T ss_pred             EEEecCCCCcHHHHHHhc
Confidence            999999999999999753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0574|consensus

Probab=99.60  E-value=6.9e-17  Score=97.28  Aligned_cols=104  Identities=19%  Similarity=0.331  Sum_probs=89.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEec-CceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG-NPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~lv~e~~~~g~   78 (106)
                      |.++.+||+|+||.|+++.++  |.-+++|.+.-....+++..|+.++++.+++++++.++.+.. ..+|+|||||..|+
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGS  114 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGS  114 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCc
Confidence            345678999999999998776  788999998766778899999999999999999999998855 67999999999999


Q ss_pred             hHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+.++. ++++++++...+++..|.+|
T Consensus       115 iSDI~R~R~K~L~E~EIs~iL~~TLKGL  142 (502)
T KOG0574|consen  115 ISDIMRARRKPLSEQEISAVLRDTLKGL  142 (502)
T ss_pred             HHHHHHHhcCCccHHHHHHHHHHHHhHH
Confidence            9999985 56788998888887776654

>KOG0582|consensus

Probab=99.60  E-value=7.4e-15  Score=91.78  Aligned_cols=104  Identities=26%  Similarity=0.332  Sum_probs=90.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |+..+.||.|.-+.||.+...  +..|++|+++...   ....+.+|+..+..+.||||++.+..| .+.++|+||.||.
T Consensus        28 YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa  107 (516)
T KOG0582|consen   28 YELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMA  107 (516)
T ss_pred             eeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhc
Confidence            778899999999999998776  8899999997543   246788999999999999999999988 5688999999999


Q ss_pred             CCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +|++.+.++..  ..+.+..+..+++++|.||
T Consensus       108 ~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL  139 (516)
T KOG0582|consen  108 GGSLLDIIKTYYPDGLEEASIATILREVLKAL  139 (516)
T ss_pred             CCcHHHHHHHHccccccHHHHHHHHHHHHHHH
Confidence            99999999863  3588888899999998876

>KOG1026|consensus

Probab=99.60  E-value=1.3e-15  Score=100.38  Aligned_cols=84  Identities=39%  Similarity=0.691  Sum_probs=71.6

Q ss_pred             CceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEe
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      ..+.||+|.||.||++..-       ...|++|.++..   ..+++|++|+.++..++||||+++.++|. +++.++|+|
T Consensus       490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFE  569 (774)
T KOG1026|consen  490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFE  569 (774)
T ss_pred             ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEE
Confidence            4567999999999998653       256888988643   35678999999999999999999999994 588999999


Q ss_pred             ecCCCChHHHHhcCC
Q psy9377          73 YAEGGSLYNELQRSS   87 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~   87 (106)
                      |+.+|||.++|+.+.
T Consensus       570 Ym~~GDL~eFLra~s  584 (774)
T KOG1026|consen  570 YMDHGDLHEFLRARS  584 (774)
T ss_pred             ecccccHHHHHHhhC
Confidence            999999999998654

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.60  E-value=2.1e-14  Score=85.39  Aligned_cols=104  Identities=27%  Similarity=0.365  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE--ecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC--TGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~lv~e~~~~g~l   79 (106)
                      |.+.+.+|+|++|.||++...+..+++|.+......+.+.+|+.++..++|++++++.+.+  ..+..++++||+++++|
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L   87 (256)
T cd05082           8 LKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL   87 (256)
T ss_pred             CeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcH
Confidence            6678899999999999998888889999886544456688899999999999999999876  33668999999999999


Q ss_pred             HHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .++++...  .++.+....++.|++.|+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l  115 (256)
T cd05082          88 VDYLRSRGRSVLGGDCLLKFSLDVCEAM  115 (256)
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            99998644  255666677888887664

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0612|consensus

Probab=99.60  E-value=9.2e-17  Score=108.67  Aligned_cols=105  Identities=24%  Similarity=0.243  Sum_probs=90.1

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      .|.+++.||+|+||.|...+++  +..||+|++++..     ...-|..|..+|.--.+++|+.++-.| +..++|+|||
T Consensus        76 DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMd  155 (1317)
T KOG0612|consen   76 DFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMD  155 (1317)
T ss_pred             hhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEe
Confidence            3778899999999999988876  7889999987543     344577788888888899999998777 5588999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |++||+|..++.+...+++++|++|+..+..||
T Consensus       156 Y~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAl  188 (1317)
T KOG0612|consen  156 YMPGGDLLTLLSKFDRLPEDWARFYTAEIVLAL  188 (1317)
T ss_pred             cccCchHHHHHhhcCCChHHHHHHHHHHHHHHH
Confidence            999999999999888899999999999887775

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.60  E-value=3.4e-14  Score=84.53  Aligned_cols=104  Identities=29%  Similarity=0.433  Sum_probs=89.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |++.+.||+|++|.+|++...  +..+++|.+...   .....+.+|+..+..++|+|++++.+.+ ..+..++++||++
T Consensus         3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (264)
T cd06623           3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD   82 (264)
T ss_pred             ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence            677899999999999999876  788999987643   3356788899999999999999999988 4578999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++.....+++.....++.|++.++
T Consensus        83 ~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l  112 (264)
T cd06623          83 GGSLADLLKKVGKIPEPVLAYIARQILKGL  112 (264)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999998777788888888999888765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.60  E-value=7.5e-15  Score=91.90  Aligned_cols=84  Identities=42%  Similarity=0.593  Sum_probs=69.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~l   69 (106)
                      |.+.+.||+|+||.||++.+.       +..+++|.++..   ...+.+.+|+.++..+ .|||++++.+.+ ..+..++
T Consensus        37 ~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~l  116 (375)
T cd05104          37 LSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLV  116 (375)
T ss_pred             eehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCccee
Confidence            567889999999999998641       357899988532   2345678899999998 799999999998 4577999


Q ss_pred             EEeecCCCChHHHHhc
Q psy9377          70 VMEYAEGGSLYNELQR   85 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~   85 (106)
                      +|||+++|+|.++++.
T Consensus       117 v~E~~~~g~L~~~l~~  132 (375)
T cd05104         117 ITEYCCYGDLLNFLRR  132 (375)
T ss_pred             eehhccCCcHHHHHHh
Confidence            9999999999999975

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.59  E-value=2.2e-14  Score=86.24  Aligned_cols=104  Identities=29%  Similarity=0.448  Sum_probs=85.2

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      +|+..+.||+|++|.+|.+.+.  +..+++|.+...   .....+.+|+.++..+.|+|++++.+.+ ..+..+++|||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            4778889999999999999875  678899987532   2345678899999999999999999988 457899999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|.+++... +++......++.|++.|+
T Consensus        85 ~~~~L~~~i~~~-~l~~~~~~~~~~~l~~~l  114 (277)
T cd06640          85 GGGSALDLLRAG-PFDEFQIATMLKEILKGL  114 (277)
T ss_pred             CCCcHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence            999999998754 466777777778877654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.59  E-value=3.6e-14  Score=84.28  Aligned_cols=104  Identities=22%  Similarity=0.308  Sum_probs=85.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |.+.+.+|+|++|.||.+.+.  +..+++|.++.   ......+..|+.++..++|+|++++.+.+ ..+..++++||++
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD   81 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence            778899999999999999876  77899998752   22345677888899999999999999988 4578999999999


Q ss_pred             CCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++.+++...  ..++++.+..++.|++.|+
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al  113 (255)
T cd08219          82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGV  113 (255)
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            99999988653  3467778888888888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.59  E-value=2.3e-14  Score=85.55  Aligned_cols=104  Identities=25%  Similarity=0.421  Sum_probs=86.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----------HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----------AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----------~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~   67 (106)
                      |...+.||+|++|.||.+.+.  +..+++|.+...           .....+.+|+.++..++|+|++++.+.+ ..+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            667889999999999999875  678899877421           1124577889999999999999999988 45788


Q ss_pred             EEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++||+++++|.+++...+.++...+..++.|++.|+
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l  119 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGL  119 (267)
T ss_pred             EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHH
Confidence            99999999999999998877788888888888888765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.59  E-value=3.7e-14  Score=84.69  Aligned_cols=104  Identities=22%  Similarity=0.366  Sum_probs=84.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |++.+.||+|+||.||.+...  +..+++|.++.     ......+.+|+..++.++|||++++.+.+ ..+..++++||
T Consensus         4 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   83 (267)
T cd08228           4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLEL   83 (267)
T ss_pred             eeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEe
Confidence            678899999999999999875  78899997642     22345678899999999999999999888 45789999999


Q ss_pred             cCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++..    ...+++.....++.|++.|+
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  119 (267)
T cd08228          84 ADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAV  119 (267)
T ss_pred             cCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHH
Confidence            999999988863    23366777778888887765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.59  E-value=3.3e-14  Score=85.96  Aligned_cols=104  Identities=21%  Similarity=0.270  Sum_probs=84.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+..+.||+|+||.||.+.+.  +..+++|.+....     ....+.+|+.++..++|++++.+.+.+ ..+..+++|||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            677889999999999999876  6789999875321     123466789999999999999998888 45789999999


Q ss_pred             cCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++...  ..+++..+..++.|++.|+
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l  115 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGL  115 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            9999999988643  2477778888888888765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.59  E-value=9.8e-15  Score=88.47  Aligned_cols=103  Identities=23%  Similarity=0.325  Sum_probs=86.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-------HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-------ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~   71 (106)
                      |...+.||+|++|.||++.+.  +..+++|.++...       ....+..|+.++..++|+|++++.+.+. .+..++||
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            678889999999999999876  6889999885321       2345667889999999999999999984 47799999


Q ss_pred             eecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      ||+ +++|.+++.... .++...+..++.|++.||
T Consensus        82 e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al  115 (298)
T cd07841          82 EFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGL  115 (298)
T ss_pred             ccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            999 889999998765 677888888999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.59  E-value=1.9e-14  Score=85.75  Aligned_cols=104  Identities=31%  Similarity=0.452  Sum_probs=85.2

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~   78 (106)
                      |.+.+.||+|++|.||.+.+. +..+++|.+... .....+.+|+..+..++|||++++++.+. ....+++|||+.+|+
T Consensus         6 ~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (256)
T cd05113           6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGC   85 (256)
T ss_pred             eEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCc
Confidence            567789999999999999876 446899987633 22456788999999999999999999884 467899999999999


Q ss_pred             hHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++... ..+++.....++.|++.|+
T Consensus        86 l~~~i~~~~~~~~~~~~~~~~~~i~~~l  113 (256)
T cd05113          86 LLNYLREHGKRFQPSQLLEMCKDVCEGM  113 (256)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            99999764 3567777888888888765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.59  E-value=2e-14  Score=85.54  Aligned_cols=99  Identities=29%  Similarity=0.426  Sum_probs=83.2

Q ss_pred             eEeecCcceEEEEEEC----CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCC
Q psy9377           7 IVGQGAFGVVWKGLWQ----NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGS   78 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~----~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~   78 (106)
                      .||+|+||.||++.++    +..+++|.++..    .....+.+|+.++..++|+|++++.+.+.....+++||++++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            5899999999998653    567899987532    23456788999999999999999999887777899999999999


Q ss_pred             hHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++.....++++.+..++.|++.|+
T Consensus        82 L~~~l~~~~~~~~~~~~~i~~qi~~al  108 (257)
T cd05116          82 LNKFLQKNKHVTEKNITELVHQVSMGM  108 (257)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999998777788888889999988765

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0662|consensus

Probab=99.59  E-value=7.6e-16  Score=86.98  Aligned_cols=103  Identities=19%  Similarity=0.341  Sum_probs=86.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |...++||+|.+|+|++++.+  ...+++|.++.    .....+..+|+.+++.++|.|++++++.. +.+...+|+|||
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            456688999999999999766  67899998752    23456788999999999999999999988 557899999999


Q ss_pred             CCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      .. +|..+... ++.+..+.++.+|.|++.++
T Consensus        84 dq-dlkkyfdslng~~d~~~~rsfmlqllrgl  114 (292)
T KOG0662|consen   84 DQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGL  114 (292)
T ss_pred             hH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhh
Confidence            66 88888876 45677788899999999876

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.59  E-value=2.4e-14  Score=85.76  Aligned_cols=104  Identities=25%  Similarity=0.387  Sum_probs=85.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH------------HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA------------ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~   66 (106)
                      |...+.||+|++|.||.+...  +..+++|.+....            ..+.+..|+..+..++|+|++++.+.+. .+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            566789999999999999765  6789999774210            1235677888999999999999999884 577


Q ss_pred             eEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .++++||+++++|.++++....++...+..++.|++.|+
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l  121 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGL  121 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence            999999999999999998877788888888888887765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.58  E-value=8.7e-15  Score=88.25  Aligned_cols=104  Identities=24%  Similarity=0.336  Sum_probs=86.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |++++.||+|++|.||.+...  +..+++|.+..   ......+.+|+.++..++|+|++++.+.+ ..+..++++||++
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (286)
T cd06622           3 IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMD   82 (286)
T ss_pred             hhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecC
Confidence            678899999999999999876  78899997753   22345678899999999999999999988 4578999999999


Q ss_pred             CCChHHHHhcC---CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS---SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~---~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|..++...   ..+++.....++.|++.|+
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  115 (286)
T cd06622          83 AGSLDKLYAGGVATEGIPEDVLRRITYAVVKGL  115 (286)
T ss_pred             CCCHHHHHHhccccCCCCHHHHHHHHHHHHHHH
Confidence            99999988763   3577888888888887764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.58  E-value=2e-14  Score=89.82  Aligned_cols=103  Identities=21%  Similarity=0.293  Sum_probs=86.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-C-----ceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-N-----PVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-----~~~l   69 (106)
                      |+..+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|+|++++.+.+.. +     ..++
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence            678899999999999999875  788999987532    234567889999999999999999998843 3     6899


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+. +++.+++.....++...++.++.|++.||
T Consensus        82 v~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL  116 (372)
T cd07853          82 VTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGL  116 (372)
T ss_pred             Eeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            999996 58988888777788899999999998875

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.58  E-value=2.5e-14  Score=86.22  Aligned_cols=98  Identities=27%  Similarity=0.316  Sum_probs=78.9

Q ss_pred             EeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCCh
Q psy9377           8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         8 lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l   79 (106)
                      ||+|+||.||.+.+.  +..+++|.+....     ....+..|+.+++.+.|++++++.+.+ ..+..+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            689999999999876  7789999885321     224566789999999999999998888 45779999999999999


Q ss_pred             HHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          80 YNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      ..++..    +..+++..+..++.|++.|+
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l  110 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGL  110 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHH
Confidence            888743    23477888888899988775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.58  E-value=3.3e-14  Score=84.32  Aligned_cols=104  Identities=25%  Similarity=0.362  Sum_probs=85.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.+|+|.++.+|++...  +..+++|.+..    ......+.+|+..+..++|+|++++.+.+ ..+..++++||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA   81 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence            678899999999999999876  78899998752    23456678899999999999999999988 457799999999


Q ss_pred             CCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|.+++...  ..++......++.|++.|+
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al  114 (256)
T cd08529          82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGL  114 (256)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            999999999764  3466666677777877664

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.58  E-value=2.1e-14  Score=85.42  Aligned_cols=100  Identities=34%  Similarity=0.504  Sum_probs=84.1

Q ss_pred             eeEeecCcceEEEEEEC--C---ceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--N---QYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~---~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g   77 (106)
                      +.||+|+||.||++.+.  +   ..+++|.+....   ....+.+|+.++..+.|+|++++.+.+..+..++++||+++|
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            46899999999998764  2   578889876332   345678899999999999999999988777889999999999


Q ss_pred             ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++.....+++.....++.|++.|+
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l  108 (257)
T cd05060          81 PLLKYLKKRREIPVSDLKELAHQVAMGM  108 (257)
T ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            9999998877788888889999988765

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.58  E-value=3.9e-14  Score=85.34  Aligned_cols=104  Identities=30%  Similarity=0.394  Sum_probs=83.9

Q ss_pred             CCCceeEeecCcceEEEEEEC------CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ------NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv   70 (106)
                      |++.+.||+|+||.||.+...      +..+++|.+...  ...+.+.+|+.++..++|+|++++.+.+.   ....+++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   85 (284)
T cd05081           6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLV   85 (284)
T ss_pred             ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEE
Confidence            567889999999999998642      567899987532  33456788999999999999999998762   2568999


Q ss_pred             EeecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +||+++++|.+++... ..++...+..++.|++.||
T Consensus        86 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL  121 (284)
T cd05081          86 MEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGM  121 (284)
T ss_pred             EEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHH
Confidence            9999999999999764 3467777788888888765

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.58  E-value=2e-14  Score=86.57  Aligned_cols=104  Identities=24%  Similarity=0.324  Sum_probs=86.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|++|.||++.+.  +..+++|.+...    ...+.+.+|+.++..++|+|++++.+.+ .+...++++||+
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~   82 (286)
T cd07847           3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYC   82 (286)
T ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEecc
Confidence            778899999999999999876  678999977422    1234567899999999999999999988 457789999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++..++.....++++.+..++.|++.++
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l  113 (286)
T cd07847          83 DHTVLNELEKNPRGVPEHLIKKIIWQTLQAV  113 (286)
T ss_pred             CccHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            9988888877666688888899999988765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.58  E-value=4.2e-14  Score=85.49  Aligned_cols=104  Identities=21%  Similarity=0.284  Sum_probs=85.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+..+.||+|+||.||.+.+.  +..+++|.+....     ....+.+|+.++..++|++++.+.+.+ ..+..++++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            567789999999999999876  6789999885321     234467899999999999999998888 45779999999


Q ss_pred             cCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++|.+++...  .+++...+..++.|++.|+
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l  115 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGL  115 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9999999888653  3578888888999988765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.58  E-value=6e-14  Score=83.80  Aligned_cols=104  Identities=27%  Similarity=0.406  Sum_probs=85.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-------HHHHHHHHHHHHHHhcCCCCceeeeeeeEec---CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-------EAERKAFAVEVRQLSRVSHPNIVKLYGACTG---NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~l   69 (106)
                      |+..+.||+|++|.||.+.+.  +..+++|.+..       ......+.+|+.++..+.|+|++++.+.+..   ...++
T Consensus         4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (265)
T cd06652           4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI   83 (265)
T ss_pred             ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence            677899999999999999876  67899997741       1123567789999999999999999998732   45789


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+++++|.+++.....+++.....++.|++.|+
T Consensus        84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l  119 (265)
T cd06652          84 FMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGV  119 (265)
T ss_pred             EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999998766677888888888887765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.58  E-value=1.9e-14  Score=85.99  Aligned_cols=104  Identities=29%  Similarity=0.472  Sum_probs=84.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH-HHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      |.+.+.||+|++|.||.+.+. ...+++|.++... ....+.+|+.++..++|+|++++.+.+.....+++|||+++|+|
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L   87 (262)
T cd05071           8 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSL   87 (262)
T ss_pred             eeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCCCcH
Confidence            678899999999999999876 4568889886422 24567889999999999999999988866778999999999999


Q ss_pred             HHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++...  ..++.+....++.|++.|+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~l~~aL  115 (262)
T cd05071          88 LDFLKGEMGKYLRLPQLVDMAAQIASGM  115 (262)
T ss_pred             HHHHhhccccCCCHHHHHHHHHHHHHHH
Confidence            9999763  2356677778888887765

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.58  E-value=5.1e-14  Score=83.86  Aligned_cols=105  Identities=28%  Similarity=0.444  Sum_probs=88.5

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      .|+..+.||+|+++.+|.+...  +..+++|.+...    .....+.+|+.++..++|+|++++.+.+ ..+..++++||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            4788999999999999999865  678899987532    2456788899999999999999999887 45779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++.....++...+..++.|++.|+
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l  112 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGL  112 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHH
Confidence            99999999998876677888888888888765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.58  E-value=9.9e-15  Score=86.89  Aligned_cols=104  Identities=28%  Similarity=0.527  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH--HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      |+..+.||+|++|.||.+... +..+++|.+....  ....+..|+..+..++|+|++++.+.+ .....+++|||++++
T Consensus         8 y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (261)
T cd05148           8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKG   87 (261)
T ss_pred             HHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccC
Confidence            667889999999999999877 6778888876432  345678899999999999999999988 457789999999999


Q ss_pred             ChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++...  ..++.+....++.|++.|+
T Consensus        88 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~al  117 (261)
T cd05148          88 SLLAFLRSPEGQVLPVASLIDMACQVAEGM  117 (261)
T ss_pred             CHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence            999999863  3466777788888887765

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.58  E-value=5.8e-14  Score=83.40  Aligned_cols=104  Identities=25%  Similarity=0.338  Sum_probs=85.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.+|+|+||.+|.+...  +..+++|.+...    .....+.+|+.+++.++|+|++++.+.+ ..+..++++|++
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC   81 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence            788999999999999998775  678999987522    2345678899999999999999999988 457899999999


Q ss_pred             CCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .+++|.+++....  ..++.....++.|++.|+
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l  114 (256)
T cd08218          82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLAL  114 (256)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            9999999987543  356777777888887664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.58  E-value=5e-14  Score=85.28  Aligned_cols=104  Identities=26%  Similarity=0.369  Sum_probs=86.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |++++.||+|++|.||++...  +..+++|.+...  .....+.+|+..+..++|+|++++.+.+ ..+..+++|||+++
T Consensus        14 y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   93 (292)
T cd06644          14 WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPG   93 (292)
T ss_pred             hhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCC
Confidence            678889999999999999876  678888887532  3456677899999999999999999988 55789999999999


Q ss_pred             CChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++..++.+ ...++...+..++.|++.++
T Consensus        94 ~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l  123 (292)
T cd06644          94 GAVDAIMLELDRGLTEPQIQVICRQMLEAL  123 (292)
T ss_pred             CcHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            999888765 34577888888888888765

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.58  E-value=3.4e-14  Score=84.65  Aligned_cols=104  Identities=30%  Similarity=0.481  Sum_probs=85.4

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      |.+.+.||+|++|.||.+... +..+++|.+... .....+.+|+.++..++|++++++.+.+.....+++|||+.+++|
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L   87 (260)
T cd05070           8 LQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKGSL   87 (260)
T ss_pred             hhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCCcH
Confidence            678899999999999999876 567888887642 234567889999999999999999988866778999999999999


Q ss_pred             HHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++...  ..++.+....++.|++.|+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~l~~al  115 (260)
T cd05070          88 LDFLKDGEGRALKLPNLVDMAAQVAAGM  115 (260)
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            9999753  2466777788888887765

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.57  E-value=4.8e-14  Score=84.37  Aligned_cols=104  Identities=31%  Similarity=0.440  Sum_probs=83.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--C---ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N---QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~---~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |.+.+.||+|+||.||.+...  +   ..+++|.++.   ......+.+|+.++..++|||++++.+.+ ..+..+++||
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (267)
T cd05066           6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTE   85 (267)
T ss_pred             eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEE
Confidence            667889999999999998764  2   3688887753   23345788899999999999999999988 4577999999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++++|.+++... ..++......++.|++.|+
T Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l  119 (267)
T cd05066          86 YMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGM  119 (267)
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999764 3466777778888887765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.57  E-value=3.5e-14  Score=84.59  Aligned_cols=104  Identities=26%  Similarity=0.431  Sum_probs=83.9

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |++.+.||+|++|.||.+... +..+++|.+... ...+.+.+|+.++..++|+|++++.+.+ ..+..++++|++++++
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   87 (261)
T cd05072           8 IKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGS   87 (261)
T ss_pred             eEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCc
Confidence            567889999999999999876 667888877532 2356788899999999999999999888 4577899999999999


Q ss_pred             hHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++...  ...+......++.|++.|+
T Consensus        88 L~~~l~~~~~~~~~~~~~~~~~~~l~~~l  116 (261)
T cd05072          88 LLDFLKSDEGGKVLLPKLIDFSAQIAEGM  116 (261)
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            99999753  3455666667778887665

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.57  E-value=2.8e-14  Score=85.55  Aligned_cols=104  Identities=25%  Similarity=0.383  Sum_probs=84.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |.....+|+|+||.||.+...       ...+++|......   ....+.+|+.++..++|+|++++.+.+. ....+++
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   86 (275)
T cd05046           7 LQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMI   86 (275)
T ss_pred             ceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEE
Confidence            667889999999999998754       2457777764321   3467888999999999999999999884 4778999


Q ss_pred             EeecCCCChHHHHhcCC---------CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS---------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~---------~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++....         .++......++.|++.||
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l  130 (275)
T cd05046          87 LEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGM  130 (275)
T ss_pred             EEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHH
Confidence            99999999999998655         577888888888888765

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.57  E-value=6.5e-14  Score=83.74  Aligned_cols=104  Identities=27%  Similarity=0.439  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-------HHHHHHHHHHHHHhcCCCCceeeeeeeEec---CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-------AERKAFAVEVRQLSRVSHPNIVKLYGACTG---NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~l   69 (106)
                      |...+.+|+|++|.||++...  +..+++|.+...       .....+.+|+.++..++|+|++++.+.+..   +..++
T Consensus         4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   83 (266)
T cd06651           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTI   83 (266)
T ss_pred             ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEE
Confidence            678899999999999999875  678899877421       123457789999999999999999988742   56789


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|++++++|.+++.....++......++.|++.|+
T Consensus        84 ~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l  119 (266)
T cd06651          84 FMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGM  119 (266)
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999998877778888888888888765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.57  E-value=1.9e-14  Score=90.59  Aligned_cols=99  Identities=19%  Similarity=0.211  Sum_probs=84.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |++.+.||+|+||.||.+.+.  +..+++|...    ...+.+|+.++..++|||++++.+.+ .....++++|++. ++
T Consensus        94 y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~  168 (391)
T PHA03212         94 FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TD  168 (391)
T ss_pred             cEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CC
Confidence            778899999999999999886  6788988653    23467899999999999999999988 4577899999985 68


Q ss_pred             hHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |..++.....++...+..++.|++.||
T Consensus       169 L~~~l~~~~~l~~~~~~~i~~qi~~aL  195 (391)
T PHA03212        169 LYCYLAAKRNIAICDILAIERSVLRAI  195 (391)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999998777788888889999998876

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.57  E-value=6.2e-14  Score=83.77  Aligned_cols=104  Identities=30%  Similarity=0.433  Sum_probs=84.2

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |+..+.||+|+||.||++...     ...+++|.++..   .....+.+|+.++..++|+|++++.+.+. .+..+++||
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e   85 (266)
T cd05033           6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE   85 (266)
T ss_pred             ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence            677899999999999999764     246888877532   23456778999999999999999999884 477899999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++++|.+++... +.++......++.|++.|+
T Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l  119 (266)
T cd05033          86 YMENGSLDKFLRENDGKFTVGQLVGMLRGIASGM  119 (266)
T ss_pred             cCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            99999999999764 3567777778888887664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.57  E-value=2.9e-14  Score=84.98  Aligned_cols=104  Identities=32%  Similarity=0.544  Sum_probs=85.0

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~   78 (106)
                      |+..+.||+|++|.||++.+. +..+++|.++.. .....+.+|+.++..++|+|++++.+.+. .+..++++|++.+++
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   87 (261)
T cd05068           8 IQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGS   87 (261)
T ss_pred             eeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCc
Confidence            567789999999999998876 567899988643 23456788999999999999999999884 577899999999999


Q ss_pred             hHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++....  .++......++.|++.|+
T Consensus        88 L~~~~~~~~~~~~~~~~~~~~~~~i~~~l  116 (261)
T cd05068          88 LLEYLQGGAGRALKLPQLIDMAAQVASGM  116 (261)
T ss_pred             HHHHHhccCCCCCCHHHHHHHHHHHHHHH
Confidence            999997643  466777788888887664

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.57  E-value=3.9e-14  Score=89.44  Aligned_cols=85  Identities=38%  Similarity=0.628  Sum_probs=69.8

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCC-CCceeeeeeeEe-cCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVS-HPNIVKLYGACT-GNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~~l   69 (106)
                      |.+.+.||+|+||.||++.++       +..+++|.++..   .....+.+|+.++..+. |+|++++.+.+. .+..++
T Consensus        39 ~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~i  118 (401)
T cd05107          39 LVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYI  118 (401)
T ss_pred             eehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEE
Confidence            345688999999999999864       357999988632   22346788999999997 999999999884 477999


Q ss_pred             EEeecCCCChHHHHhcC
Q psy9377          70 VMEYAEGGSLYNELQRS   86 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~   86 (106)
                      ++||+++|+|.++++.+
T Consensus       119 v~E~~~~g~L~~~l~~~  135 (401)
T cd05107         119 ITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             EEeccCCCcHHHHHHhc
Confidence            99999999999999754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0201|consensus

Probab=99.57  E-value=6e-16  Score=96.13  Aligned_cols=105  Identities=28%  Similarity=0.467  Sum_probs=91.2

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      .|+....||+|+||.||++.+.  +..+++|.++..   ..-..++.|+..+.+++++|+.+.++.+ .+..++++|||+
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            3777899999999999999987  788999999743   3456788999999999999999999888 678899999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .||++.+.++....+.+.....++++++.|+
T Consensus        94 ~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l  124 (467)
T KOG0201|consen   94 GGGSVLDLLKSGNILDEFEIAVILREVLKGL  124 (467)
T ss_pred             cCcchhhhhccCCCCccceeeeehHHHHHHh
Confidence            9999999999887768888888888888765

>KOG0599|consensus

Probab=99.57  E-value=6.9e-16  Score=91.85  Aligned_cols=105  Identities=26%  Similarity=0.342  Sum_probs=87.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----------HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----------AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----------~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~   67 (106)
                      |...+.+|.|..+.|.+|..+  +..+++|++...          ...+.-..|+.++.++ .||+|+++.+.+ ++...
T Consensus        19 y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~   98 (411)
T KOG0599|consen   19 YEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFV   98 (411)
T ss_pred             cChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchh
Confidence            556778999999998888665  778888888511          2234556788888886 799999999999 45779


Q ss_pred             EEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSSS  106 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~~  106 (106)
                      ++|+|+++.|.|++++...-.++++.++.+|+|+|.+++
T Consensus        99 FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVe  137 (411)
T KOG0599|consen   99 FLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVE  137 (411)
T ss_pred             hhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHH
Confidence            999999999999999998888999999999999998763

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=4.4e-14  Score=84.05  Aligned_cols=104  Identities=26%  Similarity=0.336  Sum_probs=87.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC--HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |...+.+|+|+++.+|.+...  +..+++|.+..  ......+.+|+.++..++|||++++.+.+ ..+..+++||++.+
T Consensus         5 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~   84 (262)
T cd06613           5 YELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGG   84 (262)
T ss_pred             eEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCC
Confidence            677889999999999999875  56788887753  23456788899999999999999999888 55779999999999


Q ss_pred             CChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++... ..+++..+..++.|++.|+
T Consensus        85 ~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l  114 (262)
T cd06613          85 GSLQDIYQVTRGPLSELQIAYVCRETLKGL  114 (262)
T ss_pred             CcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence            9999999875 6788888888999988765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.57  E-value=6.2e-14  Score=83.59  Aligned_cols=99  Identities=27%  Similarity=0.440  Sum_probs=81.2

Q ss_pred             eEeecCcceEEEEEEC----CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           7 IVGQGAFGVVWKGLWQ----NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~----~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      .||+|+||.||.+.++    +..+++|.+...   .....+.+|+.+++.++|+|++++.+.+.....+++|||+++++|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            4899999999998764    346888877532   234568889999999999999999998877788999999999999


Q ss_pred             HHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          80 YNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++.. ...+++..+..++.|++.|+
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l  108 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGM  108 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            999975 34577888888888888765

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0660|consensus

Probab=99.57  E-value=9.2e-15  Score=88.95  Aligned_cols=103  Identities=24%  Similarity=0.291  Sum_probs=88.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec------CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG------NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~l   69 (106)
                      |...+.||+|++|.|..+.++  +..+|+|.+..    ....+...+|+.+++.++|+|++.+.+++.+      +.+|+
T Consensus        24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYi  103 (359)
T KOG0660|consen   24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYL  103 (359)
T ss_pred             ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEE
Confidence            344678999999999999887  78999998752    2345678899999999999999999999832      56999


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|+|+ .+|.+.++.++.++++.++.++.|+|-||
T Consensus       104 V~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgL  138 (359)
T KOG0660|consen  104 VFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGL  138 (359)
T ss_pred             ehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhc
Confidence            999995 49999999988899999999999999876

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.57  E-value=4.9e-14  Score=83.59  Aligned_cols=104  Identities=24%  Similarity=0.388  Sum_probs=88.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |+..+.+|+|.+|.+|.+...  +..+++|.++.......+.+|+..++.++|+|++++.+.+ .....++++|++.+++
T Consensus         5 y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~   84 (256)
T cd06612           5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGS   84 (256)
T ss_pred             chhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCc
Confidence            678889999999999999876  6788999887554467788999999999999999999988 4577999999999999


Q ss_pred             hHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++.. ...++++.+..++.|++.|+
T Consensus        85 L~~~l~~~~~~l~~~~~~~~~~~l~~~l  112 (256)
T cd06612          85 VSDIMKITNKTLTEEEIAAILYQTLKGL  112 (256)
T ss_pred             HHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence            9999975 34577888888888888765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG4257|consensus

Probab=99.57  E-value=5.9e-15  Score=95.88  Aligned_cols=102  Identities=31%  Similarity=0.534  Sum_probs=84.1

Q ss_pred             CceeEeecCcceEEEEEEC----C--ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeec
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ----N--QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYA   74 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~----~--~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~   74 (106)
                      ..+.||.|.||.||.+.+.    |  ..+++|.++.   ++..+.++.|..+|+.++||||+++.+++.....|+|||++
T Consensus       393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL~  472 (974)
T KOG4257|consen  393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMELA  472 (974)
T ss_pred             HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEecc
Confidence            3567999999999999875    2  3578887753   45678899999999999999999999999999999999999


Q ss_pred             CCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +.|.|.+|++.++ .++..-...|+.||-.|+
T Consensus       473 ~~GELr~yLq~nk~sL~l~tL~ly~~Qi~tal  504 (974)
T KOG4257|consen  473 PLGELREYLQQNKDSLPLRTLTLYCYQICTAL  504 (974)
T ss_pred             cchhHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence            9999999999865 355555567777776554

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.57  E-value=4.6e-14  Score=84.05  Aligned_cols=104  Identities=29%  Similarity=0.508  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEec-CceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACTG-NPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~lv~e~~~~g~   78 (106)
                      |.+.+.||+|++|.||.+... +..+++|.+... .....+.+|+..++.++|+|++++.+.+.. ...++++|++++++
T Consensus         8 ~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   87 (261)
T cd05034           8 LKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGS   87 (261)
T ss_pred             eeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCC
Confidence            567889999999999998876 567889988643 234568889999999999999999998854 77999999999999


Q ss_pred             hHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++....  .++...+..++.|++.|+
T Consensus        88 L~~~i~~~~~~~~~~~~~~~~~~~i~~al  116 (261)
T cd05034          88 LLDFLKSGEGKKLRLPQLVDMAAQIAEGM  116 (261)
T ss_pred             HHHHHhccccCCCCHHHHHHHHHHHHHHH
Confidence            999997643  467777788888887765

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.57  E-value=5.2e-14  Score=86.15  Aligned_cols=104  Identities=24%  Similarity=0.431  Sum_probs=84.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--Cc----eEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQ----YVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~----~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e   72 (106)
                      |+..+.||+|+||.||++.+.  +.    .+++|.++.   ....+.+.+|+.++..++|+|++++.+.+..+..+++++
T Consensus         9 f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v~e   88 (316)
T cd05108           9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ   88 (316)
T ss_pred             ceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceeeee
Confidence            778899999999999999764  22    478888752   234567888999999999999999999987777889999


Q ss_pred             ecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      ++.+|+|.+++.... .++......++.|++.||
T Consensus        89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L  122 (316)
T cd05108          89 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM  122 (316)
T ss_pred             cCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHH
Confidence            999999999998743 466666777888887765

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.57  E-value=3.7e-14  Score=84.37  Aligned_cols=104  Identities=33%  Similarity=0.525  Sum_probs=83.8

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~   78 (106)
                      |++.+.||+|++|.||.+.++ +..+++|.+... .....+.+|+.++..++|+|++++.+.+. .+..++++|++++++
T Consensus         6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (256)
T cd05059           6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGC   85 (256)
T ss_pred             cchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCC
Confidence            567889999999999999876 557888887532 22345778999999999999999998884 477899999999999


Q ss_pred             hHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++..+ ..++.+....++.|++.|+
T Consensus        86 L~~~l~~~~~~~~~~~~~~i~~qi~~~l  113 (256)
T cd05059          86 LLNYLRERKGKLGTEWLLDMCSDVCEAM  113 (256)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            99999764 3566777778888887664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=7.4e-14  Score=83.42  Aligned_cols=104  Identities=26%  Similarity=0.421  Sum_probs=85.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-------HHHHHHHHHHHHHHhcCCCCceeeeeeeEec---CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-------EAERKAFAVEVRQLSRVSHPNIVKLYGACTG---NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~l   69 (106)
                      |.+.+.||+|++|.+|.+.+.  +..+++|.+..       ......+.+|+.+++.++|+|++++.+.+..   ...++
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (264)
T cd06653           4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI   83 (264)
T ss_pred             eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence            678899999999999999875  77899987641       1223467789999999999999999998743   45789


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|++++++|.+++.....+++.....++.|++.|+
T Consensus        84 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al  119 (264)
T cd06653          84 FVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGV  119 (264)
T ss_pred             EEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999998776778888888888888775

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.56  E-value=5.1e-14  Score=85.45  Aligned_cols=103  Identities=24%  Similarity=0.350  Sum_probs=84.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |.+.+.||+|++|.||++...  +..+++|.+...  .....+.+|+.++..++|||++++.+.+ ..+..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~  100 (293)
T cd06647          21 YTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAG  100 (293)
T ss_pred             ceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCC
Confidence            677889999999999999765  678899987532  2345677888899999999999999988 55789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++.+.. ++...+..++.|++.|+
T Consensus       101 ~~L~~~~~~~~-l~~~~~~~i~~~l~~al  128 (293)
T cd06647         101 GSLTDVVTETC-MDEGQIAAVCRECLQAL  128 (293)
T ss_pred             CcHHHHHhhcC-CCHHHHHHHHHHHHHHH
Confidence            99999987643 66777788888888765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.56  E-value=7.2e-14  Score=83.33  Aligned_cols=104  Identities=24%  Similarity=0.391  Sum_probs=85.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+..+.||+|++|.||++...  +..+++|.++.     ......+.+|+.++..++|++++++.+.+ ..+..+++|||
T Consensus         4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   83 (267)
T cd08224           4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLEL   83 (267)
T ss_pred             eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEec
Confidence            678899999999999999876  78899997752     12345678899999999999999999988 45778999999


Q ss_pred             cCCCChHHHHhcC----CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS----SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~----~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++...    ..++.+....++.|++.|+
T Consensus        84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  119 (267)
T cd08224          84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSAL  119 (267)
T ss_pred             CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHH
Confidence            9999999998642    3466777778888887765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.56  E-value=7.2e-14  Score=84.90  Aligned_cols=103  Identities=22%  Similarity=0.334  Sum_probs=84.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |+..+.+|+|++|.||.+...  +..+++|.+...  .....+.+|+.+++.++|+|++++.+.+ .....++++||+++
T Consensus        22 y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~  101 (296)
T cd06654          22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  101 (296)
T ss_pred             eeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCC
Confidence            677889999999999999865  678898877532  2345677889999999999999999988 45789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++... .++......++.|++.|+
T Consensus       102 ~~L~~~~~~~-~~~~~~~~~i~~ql~~aL  129 (296)
T cd06654         102 GSLTDVVTET-CMDEGQIAAVCRECLQAL  129 (296)
T ss_pred             CCHHHHHHhc-CCCHHHHHHHHHHHHHHH
Confidence            9999998753 466777778888888765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=3.9e-14  Score=87.22  Aligned_cols=98  Identities=28%  Similarity=0.352  Sum_probs=78.6

Q ss_pred             EeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcC---CCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV---SHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         8 lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~---~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      ||+|+||.||++.+.  +..+++|.+....     .......|..++...   .||+++.+.+.+ ..+..+++|||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            689999999999876  7889999885321     112334455555543   699999999888 45789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++...+.+++..+..++.|++.|+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al  109 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLAL  109 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999998888889999999999998876

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=5e-14  Score=84.49  Aligned_cols=103  Identities=30%  Similarity=0.468  Sum_probs=86.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |+..+.||.|++|.||++.+.  +..+++|.+...   .....+.+|+.+++.++|+|++++.+.+ .....++++|+++
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (274)
T cd06609           3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCG   82 (274)
T ss_pred             hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeC
Confidence            778889999999999999876  678999987532   2334577889999999999999999988 4577999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++... .++...+..++.|++.|+
T Consensus        83 ~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l  111 (274)
T cd06609          83 GGSCLDLLKPG-KLDETYIAFILREVLLGL  111 (274)
T ss_pred             CCcHHHHHhhc-CCCHHHHHHHHHHHHHHH
Confidence            99999999875 577888888899988765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.56  E-value=6.1e-14  Score=83.93  Aligned_cols=104  Identities=26%  Similarity=0.453  Sum_probs=84.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--C---ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N---QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~---~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |++.+.||+|+||.||++...  +   ..+++|.+..   ......+..|+.++..++|||++++.+.+ ..+..++++|
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   85 (269)
T cd05065           6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITE   85 (269)
T ss_pred             eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEe
Confidence            567789999999999998765  2   3589998753   23456788899999999999999999988 4577899999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++++|.+++... +.++......++.|++.|+
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al  119 (269)
T cd05065          86 FMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGM  119 (269)
T ss_pred             cCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999764 3466777788888887765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.56  E-value=8.6e-14  Score=84.58  Aligned_cols=103  Identities=23%  Similarity=0.334  Sum_probs=84.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |...+.||+|++|.||++...  +..+++|.+...  .....+.+|+.++..++|+|++++.+.+ .++..++++||+++
T Consensus        21 y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  100 (297)
T cd06656          21 YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  100 (297)
T ss_pred             ceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCC
Confidence            778899999999999999875  788999987532  2345577888899999999999999988 45789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++... .++......++.|++.++
T Consensus       101 ~~L~~~~~~~-~~~~~~~~~~~~~l~~~L  128 (297)
T cd06656         101 GSLTDVVTET-CMDEGQIAAVCRECLQAL  128 (297)
T ss_pred             CCHHHHHHhC-CCCHHHHHHHHHHHHHHH
Confidence            9999998753 466777778888887654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.56  E-value=3.8e-14  Score=85.26  Aligned_cols=99  Identities=22%  Similarity=0.293  Sum_probs=77.7

Q ss_pred             eEeecCcceEEEEEEC--------------------------CceEEEEEecCHH--HHHHHHHHHHHHhcCCCCceeee
Q psy9377           7 IVGQGAFGVVWKGLWQ--------------------------NQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKL   58 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~--------------------------~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~   58 (106)
                      +||+|+||.||++...                          ...+++|.+....  ....+.++..++..++|+|++++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            6899999999987631                          1246777765332  23467778888999999999999


Q ss_pred             eeeE-ecCceEEEEeecCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          59 YGAC-TGNPVCLVMEYAEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        59 ~~~~-~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++.+ ..+..++||||+++|+|..++.. .+.++......++.|++.|+
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l  130 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASAL  130 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9998 45778999999999999999975 34577888888888888765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.56  E-value=4.1e-14  Score=83.88  Aligned_cols=104  Identities=38%  Similarity=0.584  Sum_probs=86.6

Q ss_pred             CCCceeEeecCcceEEEEEECC------ceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN------QYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~------~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      +++.+.+|.|+||.||.+....      ..+++|.+....   ....+..|+..+..++|+|++++.+.+ ..+..+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            3567899999999999998763      678999886332   356788899999999999999999988 457899999


Q ss_pred             eecCCCChHHHHhcCCC--CchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSA--ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~--~~~~~~~~~~~qll~~~  105 (106)
                      |++++++|.+++.....  +++.....++.|++.|+
T Consensus        81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l  116 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGM  116 (258)
T ss_pred             eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Confidence            99999999999986543  78888889999988775

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0694|consensus

Probab=99.56  E-value=7.6e-15  Score=95.29  Aligned_cols=103  Identities=25%  Similarity=0.385  Sum_probs=82.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |..+++||+|+||+|+.+..+  +..+|+|.+++.     +..+....|..++..+ +||.+++++..| +..++|+|||
T Consensus       370 F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvme  449 (694)
T KOG0694|consen  370 FRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVME  449 (694)
T ss_pred             eEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEE
Confidence            566789999999999999887  678999988643     3345666677766665 599999999999 5588999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+.||++. .++..+.+++..++.|...+..||
T Consensus       450 y~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L  481 (694)
T KOG0694|consen  450 YVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGL  481 (694)
T ss_pred             ecCCCcEE-EEEecccccHHHHHHHHHHHHHHH
Confidence            99999944 444445699999999998887765

>KOG0594|consensus

Probab=99.56  E-value=6.3e-15  Score=89.29  Aligned_cols=103  Identities=25%  Similarity=0.399  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCc-eeeeeeeEec-C------ce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPN-IVKLYGACTG-N------PV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~-~------~~   67 (106)
                      |..++.+|+|+||.||++...  |..||+|.++..    .......+|+.+++.++|+| ++.+.+++.+ +      ..
T Consensus        13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l   92 (323)
T KOG0594|consen   13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL   92 (323)
T ss_pred             HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence            445677999999999999876  889999998633    23456789999999999999 9999999833 3      68


Q ss_pred             EEEEeecCCCChHHHHhcCC----CCchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSS----AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~qll~~~  105 (106)
                      ++++||.+. +|..++....    ..+...++.+|+||+.|+
T Consensus        93 ~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl  133 (323)
T KOG0594|consen   93 YLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGL  133 (323)
T ss_pred             EEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHH
Confidence            899999966 9999998744    455678899999999876

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.55  E-value=3.1e-14  Score=89.16  Aligned_cols=84  Identities=42%  Similarity=0.590  Sum_probs=69.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~l   69 (106)
                      |.+.+.||+|+||.||++.+.       ...+++|.++..   .....+.+|+.++..+ +|+|++++.+.+ ..+..++
T Consensus        40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~l  119 (374)
T cd05106          40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLV  119 (374)
T ss_pred             ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEE
Confidence            567889999999999988753       246899988632   2345678899999988 899999999988 4578999


Q ss_pred             EEeecCCCChHHHHhc
Q psy9377          70 VMEYAEGGSLYNELQR   85 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~   85 (106)
                      +|||+++|+|.+++..
T Consensus       120 v~ey~~~g~L~~~l~~  135 (374)
T cd05106         120 ITEYCCYGDLLNFLRK  135 (374)
T ss_pred             eHhhccCCcHHHHHHh
Confidence            9999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.55  E-value=7.1e-14  Score=83.33  Aligned_cols=104  Identities=27%  Similarity=0.442  Sum_probs=83.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      |.+...||+|++|.||.+.+. +..+++|.+... .....+.+|+.++..++|+|++++.+.+..+..+++|||+.+++|
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L   87 (260)
T cd05069           8 LRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKGSL   87 (260)
T ss_pred             eeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCCCH
Confidence            567788999999999999876 457888877532 234567789999999999999999988877778999999999999


Q ss_pred             HHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .+++....  .++.+....++.|++.||
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~l~~al  115 (260)
T cd05069          88 LDFLKEGDGKYLKLPQLVDMAAQIADGM  115 (260)
T ss_pred             HHHHhhCCCCCCCHHHHHHHHHHHHHHH
Confidence            99997643  355666777888887765

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.55  E-value=7.3e-14  Score=82.87  Aligned_cols=104  Identities=30%  Similarity=0.438  Sum_probs=85.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |...+.||+|++|.+|.+...  +..+++|.+...    .....+.+|+.+++.++|+|++++.+.+ ..+..++++|++
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA   81 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence            778899999999999998775  678899987532    2345678899999999999999999887 457799999999


Q ss_pred             CCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|.+++....  .+++..+..++.|++.++
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l  114 (256)
T cd08220          82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLAL  114 (256)
T ss_pred             CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            9999999997643  467777788888887664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG1095|consensus

Probab=99.55  E-value=4e-14  Score=96.13  Aligned_cols=84  Identities=39%  Similarity=0.690  Sum_probs=70.8

Q ss_pred             CceeEeecCcceEEEEEEC---C----ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ---N----QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~---~----~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      ....||+|.||.||.+...   +    ..+++|.++.   ......+.+|..+|..++||||+++.+++ +....++++|
T Consensus       696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le  775 (1025)
T KOG1095|consen  696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE  775 (1025)
T ss_pred             eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence            4578999999999999876   2    2377776652   34567899999999999999999999999 5678999999


Q ss_pred             ecCCCChHHHHhcCC
Q psy9377          73 YAEGGSLYNELQRSS   87 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~   87 (106)
                      ||+||+|..+|+..+
T Consensus       776 yM~gGDL~sflr~~r  790 (1025)
T KOG1095|consen  776 YMEGGDLLSFLRESR  790 (1025)
T ss_pred             hcccCcHHHHHHhcc
Confidence            999999999999763

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=1.6e-13  Score=81.21  Aligned_cols=104  Identities=33%  Similarity=0.554  Sum_probs=88.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|.+|.+|.+...  +..+++|.+...    .....+.+|+..+..++|+|++++.+.+ ..+..++++|++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            788899999999999999876  678899887532    2445788899999999999999999888 457899999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|.+++.....++++....++.|++.|+
T Consensus        82 ~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l  112 (254)
T cd06627          82 ENGSLRQIIKKFGPFPESLVAVYVYQVLQGL  112 (254)
T ss_pred             CCCcHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence            9999999998877788888889999988765

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.55  E-value=8.6e-14  Score=82.98  Aligned_cols=104  Identities=26%  Similarity=0.400  Sum_probs=84.0

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH-HHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      |...+.||+|+||.||.+... +..+++|.+.... ....+.+|+.+++.++|+|++++.+.+.....++++||+++++|
T Consensus         8 ~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~~~L   87 (260)
T cd05073           8 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSL   87 (260)
T ss_pred             eeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCCCcH
Confidence            567889999999999999765 5678888776432 34567889999999999999999988866778999999999999


Q ss_pred             HHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .+++....  ..+......++.|++.|+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~l~~aL  115 (260)
T cd05073          88 LDFLKSDEGSKQPLPKLIDFSAQIAEGM  115 (260)
T ss_pred             HHHHHhCCccccCHHHHHHHHHHHHHHH
Confidence            99997643  345556667888887765

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.55  E-value=7.5e-14  Score=83.21  Aligned_cols=98  Identities=26%  Similarity=0.374  Sum_probs=83.1

Q ss_pred             EeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCCh
Q psy9377           8 VGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         8 lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l   79 (106)
                      ||.|.+|.+|.+.+.  +..+++|.+...     .....+.+|+.++..++|+|++++.+.+ .....++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            588999999999887  788999988532     2335678899999999999999999988 45779999999999999


Q ss_pred             HHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++.+...++......++.|++.|+
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l  106 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAF  106 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            99998877788888888888888765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.55  E-value=8.2e-14  Score=84.05  Aligned_cols=105  Identities=31%  Similarity=0.400  Sum_probs=84.8

Q ss_pred             CCCCceeEeecCcceEEEEEEC------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEec---CceE
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTG---NPVC   68 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~   68 (106)
                      +|++.+.||+|+||.||.+.+.      +..+++|.++..   .....+.+|+.+++.++|+|++++.+.+..   ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            3678899999999999998642      567899987632   234568889999999999999999988832   5689


Q ss_pred             EEEeecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+++++|.+++.... .++......++.|++.|+
T Consensus        85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL  122 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGM  122 (284)
T ss_pred             EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999997643 467777788888888765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.55  E-value=8e-14  Score=82.89  Aligned_cols=104  Identities=29%  Similarity=0.439  Sum_probs=84.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv~e   72 (106)
                      |++.+.+|+|++|.||++.+.  +..+++|.+..    ......+..|+..++.++|+|++++.+.+.   ....++++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            788899999999999999775  67888887752    223456778899999999999999998773   255899999


Q ss_pred             ecCCCChHHHHhcC----CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS----SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~----~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++++|.+++...    ..+++..+..++.|++.|+
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l  118 (265)
T cd08217          82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLAL  118 (265)
T ss_pred             hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence            99999999999753    4567777788888887765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.55  E-value=3.6e-14  Score=88.10  Aligned_cols=100  Identities=27%  Similarity=0.364  Sum_probs=79.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...   .....+.+|+.++..++|+|++++.+.+ ..+..+++|||+.
T Consensus        76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  155 (353)
T PLN00034         76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD  155 (353)
T ss_pred             HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence            456788999999999999876  788999988532   3346688999999999999999999998 4577999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|....    ...+.....++.|++.||
T Consensus       156 ~~~L~~~~----~~~~~~~~~i~~qi~~aL  181 (353)
T PLN00034        156 GGSLEGTH----IADEQFLADVARQILSGI  181 (353)
T ss_pred             CCcccccc----cCCHHHHHHHHHHHHHHH
Confidence            99986432    234556667788887765

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.55  E-value=7.9e-14  Score=84.01  Aligned_cols=104  Identities=27%  Similarity=0.375  Sum_probs=84.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC--HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |++.+.||+|++|.||++.+.  +..+++|.+..  ......+.+|+.++..++|+|++++.+.+ ..+..++++||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            567788999999999999876  56778887753  23345677899999999999999999988 45779999999999


Q ss_pred             CChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++..++.. ..++++.....++.|++.|+
T Consensus        87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L  116 (282)
T cd06643          87 GAVDAVMLELERPLTEPQIRVVCKQTLEAL  116 (282)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            999888765 44677888888888888765

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.55  E-value=3.5e-14  Score=84.34  Aligned_cols=100  Identities=29%  Similarity=0.413  Sum_probs=79.9

Q ss_pred             eeEeecCcceEEEEEEC--C----------ceEEEEEecCHHH-HHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEe
Q psy9377           6 KIVGQGAFGVVWKGLWQ--N----------QYVAVKHIETEAE-RKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVME   72 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~----------~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e   72 (106)
                      +.||+|+||.||++.+.  +          ..+++|.+..... ...+.+|+.++..++|+|++++.+.+.....++++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   80 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE   80 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence            36899999999999876  2          1356666543322 567788899999999999999999885577899999


Q ss_pred             ecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++.... .++...+..++.|++.||
T Consensus        81 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l  114 (259)
T cd05037          81 YVKFGPLDVFLHREKNNVSLHWKLDVAKQLASAL  114 (259)
T ss_pred             cCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence            999999999998755 577788888888888765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.55  E-value=8.5e-14  Score=94.45  Aligned_cols=104  Identities=26%  Similarity=0.410  Sum_probs=81.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++..     .....+.+|+.++..++|||++++.+.+ ..+..+++|||
T Consensus         4 YeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY   83 (932)
T PRK13184          4 YDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPY   83 (932)
T ss_pred             eEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEc
Confidence            778899999999999999876  788999988532     2345688899999999999999999988 45779999999


Q ss_pred             cCCCChHHHHhcC---C--------CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS---S--------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~---~--------~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.+++...   .        ..+......++.|++.|+
T Consensus        84 ~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL  126 (932)
T PRK13184         84 IEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATI  126 (932)
T ss_pred             CCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHH
Confidence            9999999998642   1        122233345666776654

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.55  E-value=2.6e-14  Score=85.72  Aligned_cols=104  Identities=26%  Similarity=0.406  Sum_probs=88.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCC-CCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVS-HPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |...+.||+|++|.||.+...  +..+++|.+...     .....+.+|..++..+. |+|++++.+.+ ..+..+++||
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd05581           3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLE   82 (280)
T ss_pred             ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEc
Confidence            778899999999999999875  788999987532     22355777888888998 99999999888 4578999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++++|.+++.+...++...+..++.|++.|+
T Consensus        83 ~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l  115 (280)
T cd05581          83 YAPNGELLQYIRKYGSLDEKCTRFYAAEILLAL  115 (280)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999877788888999999998875

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.55  E-value=5.5e-14  Score=85.79  Aligned_cols=103  Identities=27%  Similarity=0.353  Sum_probs=83.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |...+.||+|+||.||++.+.  +..+++|.++..   .....+.+|+.++..++|+|++++.+.+ ..+..+++|||+.
T Consensus         8 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   87 (309)
T cd07872           8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD   87 (309)
T ss_pred             eEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC
Confidence            677889999999999999876  678999987632   1233566899999999999999999998 4578999999997


Q ss_pred             CCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      + ++.+++...+ .++...++.++.|++.|+
T Consensus        88 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL  117 (309)
T cd07872          88 K-DLKQYMDDCGNIMSMHNVKIFLYQILRGL  117 (309)
T ss_pred             C-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            5 8888887644 467778888888888765

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.55  E-value=1.3e-13  Score=83.43  Aligned_cols=104  Identities=36%  Similarity=0.513  Sum_probs=84.0

Q ss_pred             CCCceeEeecCcceEEEEEECC------------------ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN------------------QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYG   60 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~------------------~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~   60 (106)
                      |.+.+.||+|+||.||.+....                  ..+++|.+...   .....+.+|+.++..++|+|++++.+
T Consensus         7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~   86 (296)
T cd05051           7 LNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLG   86 (296)
T ss_pred             CcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence            6788999999999999886541                  34788877532   23456788999999999999999999


Q ss_pred             eEe-cCceEEEEeecCCCChHHHHhcCC-----------CCchhhhhhhhhccccCC
Q psy9377          61 ACT-GNPVCLVMEYAEGGSLYNELQRSS-----------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        61 ~~~-~~~~~lv~e~~~~g~l~~~l~~~~-----------~~~~~~~~~~~~qll~~~  105 (106)
                      .+. .+..++++|++.+++|.+++....           .++......++.|++.||
T Consensus        87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al  143 (296)
T cd05051          87 VCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGM  143 (296)
T ss_pred             EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHH
Confidence            884 478999999999999999998755           466777778888887765

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.55  E-value=7.8e-14  Score=83.98  Aligned_cols=103  Identities=25%  Similarity=0.354  Sum_probs=86.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |++.+.||+|++|.+|++.+.  +..+++|.+...    .....+.+|+.+++.++|+|++++.+.+. +...++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            788899999999999999875  788999987532    23456788999999999999999999884 57789999999


Q ss_pred             CCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                       +++|.+++.. ...+++..+..++.|++.|+
T Consensus        82 -~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l  112 (286)
T cd07832          82 -PSDLSEVLRDEERPLPEAQVKSYMRMLLKGV  112 (286)
T ss_pred             -CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence             9999999875 34577888888898888765

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.55  E-value=1.6e-13  Score=81.80  Aligned_cols=104  Identities=30%  Similarity=0.457  Sum_probs=86.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |++.+.+|+|++|.||++...  +..+++|.+...   .....+.+|+..++.++|+|++++.+.+ ..+..++++|+++
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~   82 (267)
T cd06610           3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLS   82 (267)
T ss_pred             ceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccC
Confidence            788999999999999999765  677888987532   2346688899999999999999999887 5578999999999


Q ss_pred             CCChHHHHhcC---CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS---SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~---~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.++++..   ..+++..+..++.|++.|+
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al  115 (267)
T cd06610          83 GGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGL  115 (267)
T ss_pred             CCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence            99999999764   2467778888889888765

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.54  E-value=2.3e-14  Score=86.35  Aligned_cols=104  Identities=23%  Similarity=0.306  Sum_probs=85.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|++|.||++.+.  +..+++|.+...    .....+.+|+.++..++|+|++++.+.+ .++..++++||+
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   82 (286)
T cd07846           3 YENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFV   82 (286)
T ss_pred             eeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecC
Confidence            778899999999999999876  678999976422    1244577899999999999999999988 457799999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++.++......++......++.|++.|+
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l  113 (286)
T cd07846          83 DHTVLDDLEKYPNGLDESRVRKYLFQILRGI  113 (286)
T ss_pred             CccHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            9999988877665677888888888888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=1.1e-13  Score=83.11  Aligned_cols=104  Identities=29%  Similarity=0.519  Sum_probs=84.3

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCC---CCceeeeeeeE-ecCceEEEE
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVS---HPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      .|+..+.||+|++|.+|++.+.  +..+++|.++.   ......+.+|+.++..+.   |+|++++.+.+ .....+++|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            4788899999999999999875  77899998753   223456777888888875   99999999988 456789999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++++|.++++.. .+++..+..++.|++.++
T Consensus        82 e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l  114 (277)
T cd06917          82 EYAEGGSVRTLMKAG-PIAEKYISVIIREVLVAL  114 (277)
T ss_pred             ecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHH
Confidence            999999999998764 577777888888887764

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.54  E-value=1.8e-13  Score=82.44  Aligned_cols=100  Identities=24%  Similarity=0.299  Sum_probs=81.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |++.+.||+|++|.||.+.+.  +..+++|.+..   ......+.+|+.++..++|||++++.+.+ ..+..++++||++
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   82 (279)
T cd06619           3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD   82 (279)
T ss_pred             chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence            677889999999999999875  67899998753   23345688899999999999999999988 5577899999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++..+.    .+++..+..++.|++.|+
T Consensus        83 ~~~l~~~~----~~~~~~~~~~~~qi~~~l  108 (279)
T cd06619          83 GGSLDVYR----KIPEHVLGRIAVAVVKGL  108 (279)
T ss_pred             CCChHHhh----cCCHHHHHHHHHHHHHHH
Confidence            99986553    356777778888887764

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.54  E-value=4.5e-14  Score=84.20  Aligned_cols=104  Identities=30%  Similarity=0.361  Sum_probs=87.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |...+.||+|.+|.||++.+.  +..+++|.+...   .....+.+|+..++.++|+|++++.+.+ ..+..++++|++.
T Consensus         3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (265)
T cd06605           3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD   82 (265)
T ss_pred             chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence            567788999999999999887  778899987532   3345678899999999999999999888 5578999999999


Q ss_pred             CCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++... ..+++.....++.|++.|+
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l  113 (265)
T cd06605          83 GGSLDKILKEVQGRIPERILGKIAVAVLKGL  113 (265)
T ss_pred             CCcHHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence            99999999875 6677888888888888765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=7.4e-14  Score=85.36  Aligned_cols=104  Identities=27%  Similarity=0.455  Sum_probs=86.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+..+.||+|++|.||.+...  +..+++|.+....     ....+..|+.++..++|++++++.+.+ .....++++||
T Consensus         3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   82 (316)
T cd05574           3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDY   82 (316)
T ss_pred             eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEe
Confidence            677889999999999999876  6889999886321     334677889999999999999999888 45779999999


Q ss_pred             cCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++|.+++...  ..+++.....++.|++.||
T Consensus        83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l  116 (316)
T cd05574          83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLAL  116 (316)
T ss_pred             cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHH
Confidence            9999999999754  3577778888888888765

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.54  E-value=1.2e-13  Score=84.13  Aligned_cols=104  Identities=28%  Similarity=0.450  Sum_probs=80.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--Cc--eEEEEEecC---HHHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQ--YVAVKHIET---EAERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~--~~~~k~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |++.+.||+|+||.||++.+.  +.  .+++|.+..   ......+.+|+.++..+ +|+|++++.+.+ ..+..++++|
T Consensus         9 ~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e   88 (303)
T cd05088           9 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE   88 (303)
T ss_pred             ceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEE
Confidence            567789999999999999865  33  346665542   23345677899988888 899999999988 4577999999


Q ss_pred             ecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      |+++++|.+++...+                .++...+..++.|++.|+
T Consensus        89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al  137 (303)
T cd05088          89 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM  137 (303)
T ss_pred             eCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHH
Confidence            999999999997543                245566777888887765

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG1989|consensus

Probab=99.54  E-value=2.2e-14  Score=94.75  Aligned_cols=103  Identities=22%  Similarity=0.255  Sum_probs=85.0

Q ss_pred             CCceeEeecCcceEEEEEEC-C-ceEEEEEe--cCHHHHHHHHHHHHHHhcCC-CCceeeeeeeE---e--c---CceEE
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ-N-QYVAVKHI--ETEAERKAFAVEVRQLSRVS-HPNIVKLYGAC---T--G---NPVCL   69 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~-~-~~~~~k~~--~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~---~--~---~~~~l   69 (106)
                      ++.+.|.+|+|+.||.+... + ..+|+|.+  ......+.+.+|+.+|+.++ |+|||.+++..   .  .   -++.+
T Consensus        40 ~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evll  119 (738)
T KOG1989|consen   40 TVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLL  119 (738)
T ss_pred             EEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEe
Confidence            45678999999999999987 4 88999965  34455778999999999996 99999999943   1  1   35899


Q ss_pred             EEeecCCCChHHHHhc--CCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQR--SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~qll~~~  105 (106)
                      +||||.||+|-+++..  ...++++++..++.|+..|+
T Consensus       120 LmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AV  157 (738)
T KOG1989|consen  120 LMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAV  157 (738)
T ss_pred             ehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHH
Confidence            9999999999999974  34699999999999887765

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.54  E-value=9.2e-14  Score=83.99  Aligned_cols=103  Identities=24%  Similarity=0.334  Sum_probs=84.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      |+..+.||+|++|.||++...  +..+++|.+....   ....+.+|+.+++.++|+|++++.+.+. .+..++++||+.
T Consensus         7 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (291)
T cd07844           7 YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD   86 (291)
T ss_pred             eeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC
Confidence            678899999999999999876  6889999875321   1234567999999999999999999984 578999999997


Q ss_pred             CCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      + +|.+++.+. ..++...++.++.|++.|+
T Consensus        87 ~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al  116 (291)
T cd07844          87 T-DLKQYMDDCGGGLSMHNVRLFLFQLLRGL  116 (291)
T ss_pred             C-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            5 999988764 3567788888999998875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.54  E-value=6e-14  Score=83.21  Aligned_cols=100  Identities=42%  Similarity=0.672  Sum_probs=84.1

Q ss_pred             eeEeecCcceEEEEEEC-----CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      +.||+|+||.||.+...     +..+++|.++...   ....+.+|+..+..++|+|++++.+.+ .....++++||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            46899999999999765     5678888886432   246778899999999999999999988 45779999999999


Q ss_pred             CChHHHHhcC---------CCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRS---------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~---------~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++...         ..+++.....++.|++.|+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al  118 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGM  118 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHH
Confidence            9999999875         5678888899999998875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.54  E-value=1.2e-13  Score=83.09  Aligned_cols=98  Identities=23%  Similarity=0.294  Sum_probs=80.0

Q ss_pred             EeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCCh
Q psy9377           8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGSL   79 (106)
Q Consensus         8 lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l   79 (106)
                      ||+|+||.||.+...  +..+++|.+....     ....+.+|+.++..++|||++++.+.+. .+..++++||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            589999999998766  7789999875321     2334567899999999999999998884 5779999999999999


Q ss_pred             HHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .+++....  .+++..+..++.|++.|+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l  108 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGL  108 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHH
Confidence            99997655  577888888888888765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.54  E-value=1.3e-13  Score=82.58  Aligned_cols=100  Identities=26%  Similarity=0.320  Sum_probs=76.2

Q ss_pred             eeEeecCcceEEEEEEC----CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ----NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~----~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      +.||+|+||.||++...    +..+++|.++..   .....+.+|+.++..++|||++++.+.+. ....+++|||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            35899999999998754    346788877532   23346788999999999999999999884 46789999999999


Q ss_pred             ChHHHHhcCC-----CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS-----AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~-----~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++....     ..+......++.|++.|+
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al  113 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGL  113 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHH
Confidence            9999997532     233445566777777654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.54  E-value=1.7e-14  Score=86.75  Aligned_cols=103  Identities=28%  Similarity=0.478  Sum_probs=84.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |+..+.||+|.+|.||.+.+.  +..+++|.++..   .....+.+|+..+..++|+|++++.+.+ ..+..++++||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            566788999999999999875  677899987632   2345678899999999999999999988 4577999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++..+ .+++..+..++.|++.|+
T Consensus        86 ~~~L~~~~~~~-~~~~~~~~~~~~~i~~~l  114 (277)
T cd06642          86 GGSALDLLKPG-PLEETYIATILREILKGL  114 (277)
T ss_pred             CCcHHHHhhcC-CCCHHHHHHHHHHHHHHH
Confidence            99999988753 467777778888887654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG1151|consensus

Probab=99.54  E-value=1.5e-15  Score=95.64  Aligned_cols=104  Identities=29%  Similarity=0.358  Sum_probs=86.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEec--CHH-------HHHHHHHHHHHHhcCCCCceeeeeeeE--ecCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIE--TEA-------ERKAFAVEVRQLSRVSHPNIVKLYGAC--TGNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~--~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~   68 (106)
                      |-.+..||+|+|+.||++.+-  ...+++|+-.  ..+       -.....+|-.+-+.+.||.|+++++++  +..+.|
T Consensus       465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC  544 (775)
T KOG1151|consen  465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC  544 (775)
T ss_pred             HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence            345678999999999999876  5677777643  111       123466788889999999999999999  467889


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      -|+|||+|.+|+.|++.++.+++++++.++.|+.+||
T Consensus       545 TVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL  581 (775)
T KOG1151|consen  545 TVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNAL  581 (775)
T ss_pred             eeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999875

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.54  E-value=9e-14  Score=84.32  Aligned_cols=104  Identities=30%  Similarity=0.502  Sum_probs=80.1

Q ss_pred             CCCceeEeecCcceEEEEEECC----------------ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN----------------QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC   62 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~----------------~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~   62 (106)
                      |.+.+.||+|+||.||.+...+                ..+++|.++..   .....+.+|+.++..++|+|++++.+.+
T Consensus         7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~   86 (295)
T cd05097           7 LRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVC   86 (295)
T ss_pred             CeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEE
Confidence            6788999999999999886531                24788887532   2345688899999999999999999988


Q ss_pred             -ecCceEEEEeecCCCChHHHHhcCC------------CCchhhhhhhhhccccCC
Q psy9377          63 -TGNPVCLVMEYAEGGSLYNELQRSS------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        63 -~~~~~~lv~e~~~~g~l~~~l~~~~------------~~~~~~~~~~~~qll~~~  105 (106)
                       ..+..+++|||+.+++|.+++....            ..+......++.|++.|+
T Consensus        87 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al  142 (295)
T cd05097          87 VSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGM  142 (295)
T ss_pred             cCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHH
Confidence             4578999999999999999986532            134445566777776654

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.54  E-value=1.1e-13  Score=83.28  Aligned_cols=104  Identities=32%  Similarity=0.467  Sum_probs=81.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--C-----ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N-----QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~-----~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |++.+.||+|++|.||.+...  +     ..+++|.+...   .....+.+|+..+..++|+|++++.+.+. ....+++
T Consensus         7 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   86 (283)
T cd05048           7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCML   86 (283)
T ss_pred             cchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEE
Confidence            678899999999999998764  2     46888877532   33456788999999999999999999884 5778999


Q ss_pred             EeecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      +||+++|+|.+++....                .++......++.|++.|+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al  137 (283)
T cd05048          87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGM  137 (283)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHH
Confidence            99999999999997642                244455567777777664

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.53  E-value=1.2e-13  Score=83.14  Aligned_cols=103  Identities=27%  Similarity=0.366  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|++|.||++...  +..+++|.++..    .....+.+|+.++..++|+|++++.+.+ .++..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL   81 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence            778899999999999999875  778999987532    1234577899999999999999999998 557899999999


Q ss_pred             CCCChHHHHhcC---CCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRS---SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~---~~~~~~~~~~~~~qll~~~  105 (106)
                      . +++.+++...   ..+++..+..++.|++.||
T Consensus        82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L  114 (285)
T cd07861          82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGI  114 (285)
T ss_pred             C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHH
Confidence            7 5888888642   3477788888999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.53  E-value=8.2e-14  Score=84.70  Aligned_cols=103  Identities=26%  Similarity=0.354  Sum_probs=83.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |...+.||+|++|.||.+.+.  +..+++|.+...   .....+.+|+..+..++|+|++++.+.+ ..+..++++||+.
T Consensus         8 y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~   87 (301)
T cd07873           8 YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD   87 (301)
T ss_pred             eEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc
Confidence            678899999999999999876  678999987532   2234567899999999999999999998 4577999999997


Q ss_pred             CCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      + +|.+++... ..++...+..++.|++.|+
T Consensus        88 ~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL  117 (301)
T cd07873          88 K-DLKQYLDDCGNSINMHNVKLFLFQLLRGL  117 (301)
T ss_pred             c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            4 898888764 4577788888888888765

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.53  E-value=1.2e-13  Score=82.67  Aligned_cols=104  Identities=33%  Similarity=0.458  Sum_probs=84.0

Q ss_pred             CCCceeEeecCcceEEEEEECC-----ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN-----QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~-----~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~   73 (106)
                      |...+.||+|++|.||++.+..     ..+++|....   ....+.+.+|+.+++.++|+|++++.+.+..+..+++||+
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~   87 (270)
T cd05056           8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVMEL   87 (270)
T ss_pred             ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEEEc
Confidence            5567899999999999987642     3578887653   2334578889999999999999999998877778999999


Q ss_pred             cCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++.... .++......++.|++.|+
T Consensus        88 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l  120 (270)
T cd05056          88 APLGELRSYLQVNKYSLDLASLILYSYQLSTAL  120 (270)
T ss_pred             CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999998644 467777778888887765

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0658|consensus

Probab=99.53  E-value=1.7e-15  Score=92.19  Aligned_cols=101  Identities=26%  Similarity=0.464  Sum_probs=80.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe---cC---ceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT---GN---PVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~---~~~lv~e~   73 (106)
                      |...+.+|+|+||.||++...  +..+|+|..-..  .+-..+|+.+|+.++|||++++.-.|.   +.   ...+||||
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d--~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVley  103 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQD--KRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEY  103 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcCCCceeEEEEecCC--CCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHh
Confidence            455688999999999999876  688999987422  122346888999999999999987772   12   35789999


Q ss_pred             cCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++. +|.+.++.    +..++.-.++.|+.||+.|+
T Consensus       104 mP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl  138 (364)
T KOG0658|consen  104 MPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGL  138 (364)
T ss_pred             chH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHH
Confidence            987 89999984    45688888999999999876

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.53  E-value=1.2e-13  Score=83.92  Aligned_cols=103  Identities=24%  Similarity=0.364  Sum_probs=85.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |+..+.||.|++|.||++.+.  +..+++|.+...  .....+.+|+..+..++|+|++++.+.+ ..+..++++||+++
T Consensus        21 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  100 (296)
T cd06655          21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAG  100 (296)
T ss_pred             EEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCC
Confidence            667789999999999998765  788999987532  2345677899999999999999999988 45779999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++... .++++....++.|++.|+
T Consensus       101 ~~L~~~~~~~-~l~~~~~~~i~~~l~~al  128 (296)
T cd06655         101 GSLTDVVTET-CMDEAQIAAVCRECLQAL  128 (296)
T ss_pred             CcHHHHHHhc-CCCHHHHHHHHHHHHHHH
Confidence            9999988764 477888888888887764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.53  E-value=1.5e-13  Score=82.83  Aligned_cols=104  Identities=25%  Similarity=0.367  Sum_probs=81.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-HHHHHHHHHHHHhcC-CCCceeeeeeeEe------cCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-ERKAFAVEVRQLSRV-SHPNIVKLYGACT------GNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~i~~~~~~~~------~~~~~lv~   71 (106)
                      |++.+.||+|++|.||++...  +..+++|.++... ....+.+|+.++..+ +|+|++++.+.+.      .+..+++|
T Consensus        20 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~   99 (286)
T cd06638          20 WEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVL   99 (286)
T ss_pred             eeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEE
Confidence            678899999999999999876  6788999875322 234567788888888 6999999998772      24589999


Q ss_pred             eecCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++++|.+++..    ...+++..+..++.|++.|+
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l  137 (286)
T cd06638         100 ELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGL  137 (286)
T ss_pred             eecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHH
Confidence            99999999988753    23466777778888887664

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.53  E-value=1.5e-13  Score=81.63  Aligned_cols=104  Identities=25%  Similarity=0.354  Sum_probs=84.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe--cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT--GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~lv~e~   73 (106)
                      |++.+.+|+|++|.||.+...  +..+++|.+...    .....+.+|+.++..++|+|++++.+.+.  .+..++++|+
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            788999999999999998876  678999987532    23345778888999999999999988773  3458999999


Q ss_pred             cCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++...  ..+++..+..++.|++.++
T Consensus        82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l  115 (257)
T cd08223          82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMAL  115 (257)
T ss_pred             cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999763  3467777888888887765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.53  E-value=1.2e-13  Score=83.47  Aligned_cols=104  Identities=21%  Similarity=0.298  Sum_probs=85.0

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCH------HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETE------AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~------~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~   68 (106)
                      |++.+.||+|+||.||.+...     +..+++|.++..      ...+.+.+|+.++..+ +|++++++.+.+. ....+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            678899999999999998762     577899987532      1234567788888888 5899999988884 46789


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++||+++++|.+++.....++...+..++.|++.|+
T Consensus        82 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al  118 (290)
T cd05613          82 LILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLAL  118 (290)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999998877788888888888888765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.53  E-value=2.1e-13  Score=82.47  Aligned_cols=104  Identities=27%  Similarity=0.298  Sum_probs=83.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv~e~   73 (106)
                      |...+.||.|.+|.||.+.+.  +..+++|.+...   .....+.+|+..+..++|+|++++.+.+.   .+..+++|||
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~   82 (287)
T cd06621           3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY   82 (287)
T ss_pred             eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence            556789999999999999875  678899987532   23456788999999999999999999883   3468999999


Q ss_pred             cCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++..    ...++......++.|++.|+
T Consensus        83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L  118 (287)
T cd06621          83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGL  118 (287)
T ss_pred             cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            999999888753    23466777778888887765

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.53  E-value=7.6e-14  Score=82.82  Aligned_cols=104  Identities=25%  Similarity=0.398  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.+|+|++|.||++..+  +..+++|.+...    .....+.+|+..++.++|+|++++.+.+ ..+..++++||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   81 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC   81 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence            778899999999999999876  678899987532    2334567899999999999999999988 457799999999


Q ss_pred             CCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|.+++....  .+++.....++.|++.|+
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l  114 (257)
T cd08225          82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGL  114 (257)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            9999999997643  356667777788877664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.53  E-value=2.6e-13  Score=80.29  Aligned_cols=104  Identities=31%  Similarity=0.506  Sum_probs=87.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----HHHHHHHHHHHHhcCCCCceeeeeeeEe-c--CceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGACT-G--NPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--~~~~lv~e   72 (106)
                      |...+.||+|++|.+|.+...  +..+++|.+....    ....+.+|+..+..++|+|++++.+.+. .  ...++++|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            677899999999999999887  7788999875332    3566788999999999999999998884 3  57899999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++++|.+++.....++......++.|++.++
T Consensus        82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l  114 (260)
T cd06606          82 YVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGL  114 (260)
T ss_pred             ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999998876778888888888888765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.53  E-value=2.3e-13  Score=81.92  Aligned_cols=104  Identities=27%  Similarity=0.459  Sum_probs=84.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--C----ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N----QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~----~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e   72 (106)
                      |...+.||+|+||.||++...  +    ..+++|.+...   .....+.+|+..+..++|+|++++.+.+.+...++++|
T Consensus         9 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e   88 (279)
T cd05057           9 LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQ   88 (279)
T ss_pred             cEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEEEe
Confidence            567789999999999998764  2    25777776532   23456788999999999999999999987788999999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++..+ ..+++..+..++.|++.|+
T Consensus        89 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l  122 (279)
T cd05057          89 LMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGM  122 (279)
T ss_pred             cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            99999999999874 3577888888888888765

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.53  E-value=2.4e-13  Score=81.92  Aligned_cols=103  Identities=29%  Similarity=0.451  Sum_probs=82.7

Q ss_pred             CCCceeEeecCcceEEEEEEC------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~l   69 (106)
                      |+..+.||+|+||.||.+.+.      +..+++|.++..   .....+.+|+.++..++|||++++.+.+.   ....++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            477899999999999875432      567899988632   23456778999999999999999998873   245899


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++++|.+++... .++......++.|++.|+
T Consensus        86 v~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l  120 (283)
T cd05080          86 IMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGM  120 (283)
T ss_pred             EecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHH
Confidence            99999999999999764 478888888888888765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.53  E-value=1.8e-13  Score=82.43  Aligned_cols=98  Identities=24%  Similarity=0.329  Sum_probs=77.0

Q ss_pred             EeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCCh
Q psy9377           8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         8 lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l   79 (106)
                      ||+|+||.||.+...  +..+++|.+....     .......|+.++..++|||++++.+.+ ...+.+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            689999999998776  7889999885321     123345688899999999999999888 45789999999999999


Q ss_pred             HHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .+++....  ..+...+..++.|++.|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al  108 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGI  108 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence            98886543  355666677788887765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.53  E-value=8e-14  Score=83.24  Aligned_cols=104  Identities=26%  Similarity=0.492  Sum_probs=83.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      |...+.||+|++|.||++.+.  +..+++|.+... .....+.+|+..+..++|+|++++.+.+. .+..+++|||++++
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (263)
T cd05052           8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG   87 (263)
T ss_pred             eEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCC
Confidence            456678999999999999875  678899987643 23456788999999999999999999884 57789999999999


Q ss_pred             ChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++....  .++......++.|++.++
T Consensus        88 ~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l  117 (263)
T cd05052          88 NLLDYLRECNRQEVNAVVLLYMATQISSAM  117 (263)
T ss_pred             cHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            9999997543  456666677888887765

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0196|consensus

Probab=99.53  E-value=3.8e-14  Score=93.71  Aligned_cols=84  Identities=36%  Similarity=0.626  Sum_probs=73.1

Q ss_pred             CceeEeecCcceEEEEEEC-----CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEec-CceEEEEeec
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTG-NPVCLVMEYA   74 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~lv~e~~   74 (106)
                      +-++||.|.||.|+++..+     ...|++|.++.   +..+..|+.|..+|.+.+||||+++.++.+. ..++|++|||
T Consensus       633 Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyM  712 (996)
T KOG0196|consen  633 IEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYM  712 (996)
T ss_pred             EEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhh
Confidence            4578999999999999775     35789998873   3556789999999999999999999999965 7799999999


Q ss_pred             CCCChHHHHhcCC
Q psy9377          75 EGGSLYNELQRSS   87 (106)
Q Consensus        75 ~~g~l~~~l~~~~   87 (106)
                      ++|+|+.+|+.+.
T Consensus       713 ENGsLDsFLR~~D  725 (996)
T KOG0196|consen  713 ENGSLDSFLRQND  725 (996)
T ss_pred             hCCcHHHHHhhcC
Confidence            9999999998753

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.52  E-value=9.2e-14  Score=83.00  Aligned_cols=104  Identities=24%  Similarity=0.366  Sum_probs=83.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |++.+.||+|++|.||++...  +..+++|.+...     .....+.+|+.++..+.|+|++++.+.+ ..+..++++|+
T Consensus         4 y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   83 (267)
T cd08229           4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL   83 (267)
T ss_pred             hhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEe
Confidence            667889999999999999865  788999976532     2345677899999999999999999888 45789999999


Q ss_pred             cCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++..    ...+++.....++.|++.|+
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  119 (267)
T cd08229          84 ADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSAL  119 (267)
T ss_pred             cCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHH
Confidence            999999998864    23466777778888887664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.52  E-value=1.6e-13  Score=82.61  Aligned_cols=103  Identities=23%  Similarity=0.343  Sum_probs=84.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |+..+.||+|++|.+|++.+.  +..+++|.++..   .....+.+|+.++..++|+|++++.+.+ ..+..++++||++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (284)
T cd07836           2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD   81 (284)
T ss_pred             ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence            778899999999999999886  778999987532   2234566789999999999999999998 4578899999997


Q ss_pred             CCChHHHHhcCC---CCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSS---AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~---~~~~~~~~~~~~qll~~~  105 (106)
                      + ++.+++....   .+++..+..++.|++.|+
T Consensus        82 ~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l  113 (284)
T cd07836          82 K-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGI  113 (284)
T ss_pred             c-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHH
Confidence            5 8888887543   467888888999988765

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.52  E-value=3.8e-13  Score=79.30  Aligned_cols=105  Identities=28%  Similarity=0.458  Sum_probs=88.7

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH--HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      .|...+.+|+|++|.+|++...  +..+++|.++...  ....+.+|+..+..++|++++++.+.+ ..+..++++|+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            4788899999999999999886  7789999886443  456788899999999999999999988 4577999999999


Q ss_pred             CCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++... ..++......++.|++.|+
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l  111 (253)
T cd05122          81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGL  111 (253)
T ss_pred             CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence            99999999875 4677888888888887765

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.52  E-value=2.3e-13  Score=80.59  Aligned_cols=100  Identities=33%  Similarity=0.518  Sum_probs=79.4

Q ss_pred             eeEeecCcceEEEEEEC-CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCChH
Q psy9377           6 KIVGQGAFGVVWKGLWQ-NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGSLY   80 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l~   80 (106)
                      +.||+|++|.||++... +..+++|.++..   .....+.+|+..+..++|+|++++.+.+. .+..+++|||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36899999999999766 677899987532   23446788999999999999999999884 47789999999999999


Q ss_pred             HHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          81 NELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        81 ~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +++.... .+.......++.|++.|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~i~~~l  106 (250)
T cd05085          81 SFLRKKKDELKTKQLVKFALDAAAGM  106 (250)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9987543 456666677777776654

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.52  E-value=3.9e-13  Score=80.41  Aligned_cols=101  Identities=22%  Similarity=0.290  Sum_probs=81.2

Q ss_pred             ceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCCh
Q psy9377           5 SKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l   79 (106)
                      ...||+|+||.||++.+.  +..+++|.+...  ...+.+.+|+.++..++|+|++++.+.+ ..+..++++||+++++|
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   92 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSL   92 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCH
Confidence            357999999999999866  567888877532  2345678899999999999999999988 45779999999999999


Q ss_pred             HHHHhcC-CCC--chhhhhhhhhccccCC
Q psy9377          80 YNELQRS-SAA--SLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~-~~~--~~~~~~~~~~qll~~~  105 (106)
                      .+++... ...  +...+..++.|++.|+
T Consensus        93 ~~~l~~~~~~~~~~~~~~~~~~~qi~~al  121 (268)
T cd06624          93 SALLRSKWGPLKDNEQTIIFYTKQILEGL  121 (268)
T ss_pred             HHHHHHhcccCCCcHHHHHHHHHHHHHHH
Confidence            9999864 334  5666677788887765

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.52  E-value=3.3e-13  Score=81.60  Aligned_cols=104  Identities=26%  Similarity=0.360  Sum_probs=78.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |++.+.||+|+||.||++..+       +..+++|.++..   .....+.+|+..+..++|+|++++.+.+ .++..+++
T Consensus         8 ~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   87 (288)
T cd05061           8 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV   87 (288)
T ss_pred             ceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEE
Confidence            678899999999999988643       246888877522   2234567888899999999999999988 45778999


Q ss_pred             EeecCCCChHHHHhcCCC----------CchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSA----------ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~----------~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++...+.          .+......++.|++.|+
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  132 (288)
T cd05061          88 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM  132 (288)
T ss_pred             EeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999975321          12334456677776654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.52  E-value=3.4e-13  Score=80.67  Aligned_cols=104  Identities=28%  Similarity=0.418  Sum_probs=83.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--C---ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N---QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~---~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |+..+.||+|++|.||++...  +   ..+++|.+...   ...+.+..|+.++..++|+|++++.+.+. .+..+++||
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (268)
T cd05063           7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITE   86 (268)
T ss_pred             ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEE
Confidence            566789999999999999764  2   25788877532   23456788999999999999999999884 477899999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++++|.+++..+ ..++......++.|++.|+
T Consensus        87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al  120 (268)
T cd05063          87 YMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGM  120 (268)
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999764 4567777778888887765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.52  E-value=2.5e-13  Score=81.73  Aligned_cols=104  Identities=28%  Similarity=0.432  Sum_probs=81.1

Q ss_pred             CCCceeEeecCcceEEEEEECC-------ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN-------QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~-------~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |.+.+.||+|++|.||.+.+.+       ..+++|.++.   ......+.+|+.++..++|+|++++.+.+ ..+..+++
T Consensus         8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   87 (277)
T cd05036           8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFIL   87 (277)
T ss_pred             cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEE
Confidence            5677899999999999987753       4677787642   22345678899999999999999999987 45778999


Q ss_pred             EeecCCCChHHHHhcCC-------CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS-------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~-------~~~~~~~~~~~~qll~~~  105 (106)
                      |||+.+++|.+++....       .++......++.|++.|+
T Consensus        88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l  129 (277)
T cd05036          88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGC  129 (277)
T ss_pred             EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999997653       245556667777877654

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.52  E-value=1.1e-13  Score=83.15  Aligned_cols=104  Identities=34%  Similarity=0.490  Sum_probs=82.1

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |.+.+.||+|++|.||++...       +..+++|.++..   .....+.+|+.++..++|+|++++.+.+ .....+++
T Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   86 (280)
T cd05049           7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMV   86 (280)
T ss_pred             hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEE
Confidence            567788999999999998753       357889987532   2346788899999999999999999988 45789999


Q ss_pred             EeecCCCChHHHHhcCC--------------CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS--------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~--------------~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++++|.+++...+              .++......++.|++.|+
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l  135 (280)
T cd05049          87 FEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGM  135 (280)
T ss_pred             EecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHH
Confidence            99999999999997543              244556667777777654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.52  E-value=1.8e-13  Score=82.58  Aligned_cols=104  Identities=24%  Similarity=0.361  Sum_probs=87.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      |+..+.+|+|.+|.+|.+.+.  +..+++|.+.... ....+.+|+..+..++|+|++++.+.+ ..+..++++||++++
T Consensus        21 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~  100 (286)
T cd06614          21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGG  100 (286)
T ss_pred             chHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCC
Confidence            567788999999999999876  7788999886432 355677899999999999999999988 557899999999999


Q ss_pred             ChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++.... .++......++.|++.|+
T Consensus       101 ~L~~~l~~~~~~l~~~~~~~i~~~i~~~L  129 (286)
T cd06614         101 SLTDIITQNFVRMNEPQIAYVCREVLQGL  129 (286)
T ss_pred             cHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence            9999998865 677788788888887765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG4250|consensus

Probab=99.52  E-value=5.3e-15  Score=96.33  Aligned_cols=101  Identities=34%  Similarity=0.474  Sum_probs=81.5

Q ss_pred             ceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-------cCceEEEEe
Q psy9377           5 SKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-------GNPVCLVME   72 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~lv~e   72 (106)
                      .+.||+|+||.||+++.+  |..+|+|.++..   ...+...+|+.++++++|+|||++.++-.       +....++||
T Consensus        18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE   97 (732)
T KOG4250|consen   18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME   97 (732)
T ss_pred             hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence            467999999999999866  899999988753   34567788999999999999999988762       345789999


Q ss_pred             ecCCCChHHHHhcCC---CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS---AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~---~~~~~~~~~~~~qll~~~  105 (106)
                      ||.||||...+.+..   .+++.....++..+..|+
T Consensus        98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al  133 (732)
T KOG4250|consen   98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSAL  133 (732)
T ss_pred             ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHH
Confidence            999999999998643   477777777766665543

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.51  E-value=1e-13  Score=83.52  Aligned_cols=104  Identities=27%  Similarity=0.304  Sum_probs=85.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|++|.+|++.+.  +..+++|.++..    .....+.+|+.++..++|+|++++.+.+ ..+..++++||+
T Consensus         3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   82 (288)
T cd07833           3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV   82 (288)
T ss_pred             eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecC
Confidence            678899999999999999876  678999977532    2245678899999999999999999988 557799999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++.+..+......++...+..++.|++.|+
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l  113 (288)
T cd07833          83 ERTLLELLEASPGGLPPDAVRSYIWQLLQAI  113 (288)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9877776666656678888888888888765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0578|consensus

Probab=99.51  E-value=8.3e-15  Score=93.30  Aligned_cols=104  Identities=26%  Similarity=0.369  Sum_probs=87.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |.....+|+|+-|.||.+...  +..+++|.++..  ...+-+.+|+.+|+..+|+|++++.+.| -.+.+|+||||++|
T Consensus       275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~g  354 (550)
T KOG0578|consen  275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEG  354 (550)
T ss_pred             hcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCC
Confidence            666788999999999998765  778999988643  3456688999999999999999999888 46889999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSSS  106 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~~  106 (106)
                      |+|-+.+.... +.+.....+++.++.||+
T Consensus       355 gsLTDvVt~~~-~~E~qIA~Icre~l~aL~  383 (550)
T KOG0578|consen  355 GSLTDVVTKTR-MTEGQIAAICREILQGLK  383 (550)
T ss_pred             Cchhhhhhccc-ccHHHHHHHHHHHHHHHH
Confidence            99988887654 778888888888887763

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.51  E-value=1.3e-13  Score=84.28  Aligned_cols=100  Identities=24%  Similarity=0.344  Sum_probs=79.5

Q ss_pred             ceeEeecCcceEEEEEEC----CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEEEeecCCC
Q psy9377           5 SKIVGQGAFGVVWKGLWQ----NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLVMEYAEGG   77 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv~e~~~~g   77 (106)
                      .+.||+|+||.||++...    +..+++|.+..........+|+.++..++|||++++.+.+.   ....++++||+.+ 
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-   84 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-   84 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-
Confidence            468999999999999864    46789998865444455778999999999999999999883   3568999999865 


Q ss_pred             ChHHHHhcC---------CCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRS---------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~---------~~~~~~~~~~~~~qll~~~  105 (106)
                      ++.+++...         ..+++..++.++.|++.|+
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al  121 (317)
T cd07868          85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI  121 (317)
T ss_pred             CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHH
Confidence            888887532         1367777889999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.51  E-value=2.7e-13  Score=81.71  Aligned_cols=104  Identities=25%  Similarity=0.420  Sum_probs=81.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--Cc----eEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQ----YVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~----~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e   72 (106)
                      |...+.||+|+||.||++.+.  +.    .+++|.+...   .....+..++..+..+.|+|++++.+.+.....++++|
T Consensus         9 ~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e   88 (279)
T cd05111           9 LRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQ   88 (279)
T ss_pred             ceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEEE
Confidence            567789999999999999874  33    4666766422   22345666777788899999999999887777889999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|+|.+++... +.++......++.|++.|+
T Consensus        89 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l  122 (279)
T cd05111          89 LSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGM  122 (279)
T ss_pred             eCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            99999999999764 4577788888899988765

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.51  E-value=2.3e-13  Score=80.58  Aligned_cols=104  Identities=27%  Similarity=0.451  Sum_probs=87.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |...+.+|+|++|.+|.+.+.  +..+++|.+...    .....+.+|+..+..++|+|++++.+.+ ..+..++++|++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~   81 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA   81 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence            778899999999999999877  788999987532    3455678899999999999999999888 457799999999


Q ss_pred             CCCChHHHHhcC----CCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRS----SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~----~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|.+++...    ..++......++.|++.|+
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l  116 (258)
T cd08215          82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLAL  116 (258)
T ss_pred             CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHH
Confidence            999999999763    4577778888888888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.51  E-value=4.6e-13  Score=80.51  Aligned_cols=104  Identities=27%  Similarity=0.404  Sum_probs=78.9

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |+..+.||+|++|.||.+.+.       +..+++|.+...   .....+.+|+.+++.++|+|++++.+.+. .+..+++
T Consensus         8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv   87 (277)
T cd05062           8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI   87 (277)
T ss_pred             ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEE
Confidence            677889999999999988754       346888877532   23446778999999999999999999884 4779999


Q ss_pred             EeecCCCChHHHHhcCCC----------CchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSA----------ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~----------~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.++++....          ++......++.|++.||
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  132 (277)
T cd05062          88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM  132 (277)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHH
Confidence            999999999999975321          22334455666776654

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.51  E-value=2.2e-13  Score=81.93  Aligned_cols=104  Identities=34%  Similarity=0.471  Sum_probs=84.4

Q ss_pred             CCCceeEeecCcceEEEEEEC------CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~l   69 (106)
                      |+..+.||+|+||.||.+.+.      +..+++|.+....   ....+.+|+..+..++|+|++++.+++.   ....++
T Consensus         6 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~l   85 (284)
T cd05038           6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRL   85 (284)
T ss_pred             chhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEE
Confidence            567789999999999998753      4678999886332   3567888999999999999999998873   356899


Q ss_pred             EEeecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+++++|.+++.... .++......++.|++.||
T Consensus        86 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL  122 (284)
T cd05038          86 IMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGM  122 (284)
T ss_pred             EEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHH
Confidence            999999999999998754 466777788888887765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.51  E-value=2.8e-13  Score=81.09  Aligned_cols=99  Identities=28%  Similarity=0.387  Sum_probs=75.7

Q ss_pred             eEeecCcceEEEEEEC----CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           7 IVGQGAFGVVWKGLWQ----NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~----~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      .||+|+||.||.+...    ...+++|.+...   .....+.+|+..++.++|+|++++.+.+ .....+++|||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            5899999999998643    245677766422   2345677899999999999999999988 4577999999999999


Q ss_pred             hHHHHhcCCC-----CchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSSA-----ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~~-----~~~~~~~~~~~qll~~~  105 (106)
                      |.+++.....     .+...+..++.|++.|+
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l  113 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGL  113 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHH
Confidence            9999976432     23455677788887664

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.51  E-value=1.3e-13  Score=85.40  Aligned_cols=84  Identities=37%  Similarity=0.569  Sum_probs=68.8

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe--cCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT--GNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~--~~~~~   68 (106)
                      |.+.+.||+|+||.||++.+.       +..+++|.++..   .....+.+|+.++..+ .|+|++++.+.+.  ....+
T Consensus         9 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~   88 (343)
T cd05103           9 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM   88 (343)
T ss_pred             hcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceE
Confidence            678899999999999999742       467999988632   2345677899999998 5799999998873  35689


Q ss_pred             EEEeecCCCChHHHHhc
Q psy9377          69 LVMEYAEGGSLYNELQR   85 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~   85 (106)
                      ++|||+++|+|.+++..
T Consensus        89 lv~ey~~~g~L~~~i~~  105 (343)
T cd05103          89 VIVEFCKFGNLSNYLRS  105 (343)
T ss_pred             EEEeccCCCcHHHHHHh
Confidence            99999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.51  E-value=3.1e-13  Score=87.40  Aligned_cols=104  Identities=23%  Similarity=0.233  Sum_probs=83.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec---------Cc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG---------NP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~   66 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++.    ......+.+|+..+..++|+|++++.+.+..         ..
T Consensus        34 Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~  113 (496)
T PTZ00283         34 YWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLM  113 (496)
T ss_pred             EEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceE
Confidence            677889999999999999875  78999998853    2334557788999999999999998876621         13


Q ss_pred             eEEEEeecCCCChHHHHhcC----CCCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQRS----SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|||+++|+|.+++...    ..+++..+..++.|++.||
T Consensus       114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL  156 (496)
T PTZ00283        114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAV  156 (496)
T ss_pred             EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHH
Confidence            68999999999999998642    3577788888888888765

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=3.3e-13  Score=80.36  Aligned_cols=100  Identities=23%  Similarity=0.337  Sum_probs=78.8

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHHH-----HHHHHHHHHH-HhcCCCCceeeeeeeEe-cCceEEEEeecCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE-----RKAFAVEVRQ-LSRVSHPNIVKLYGACT-GNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~-----~~~~~~~~~~-~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~   76 (106)
                      +.+|+|++|.||++...  +..+++|.++....     ......|... .....|+|++++++.+. .+..++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            57899999999999875  67899998853321     1223334333 33458999999999884 4789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.++++..+.+++..+..++.|++.|+
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL  110 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGV  110 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877788889999999998775

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG2052|consensus

Probab=99.50  E-value=3.8e-14  Score=88.63  Aligned_cols=100  Identities=30%  Similarity=0.472  Sum_probs=76.7

Q ss_pred             CceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhc--CCCCceeeeeeeE--ec---CceEEEEeecCC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSR--VSHPNIVKLYGAC--TG---NPVCLVMEYAEG   76 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~--~~---~~~~lv~e~~~~   76 (106)
                      ..+.+|+|.||.||++.++|+.||+|++.+.+. +++.+|..+.+.  ++|+||+.+...=  +.   ..+++|+||.+.
T Consensus       215 L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE-~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~  293 (513)
T KOG2052|consen  215 LQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDE-RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEH  293 (513)
T ss_pred             EEEEecCccccceeeccccCCceEEEEecccch-hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccC
Confidence            357899999999999999999999999975543 345567776665  6999999886432  22   458999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||++||.++. .+......++..+.++|
T Consensus       294 GSL~DyL~r~t-v~~~~ml~LalS~AsGL  321 (513)
T KOG2052|consen  294 GSLYDYLNRNT-VTTEGMLKLALSIASGL  321 (513)
T ss_pred             CcHHHHHhhcc-CCHHHHHHHHHHHhhhH
Confidence            99999999854 55555566666665554

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.50  E-value=3.4e-13  Score=82.27  Aligned_cols=104  Identities=28%  Similarity=0.356  Sum_probs=79.3

Q ss_pred             CCCceeEeecCcceEEEEEEC---------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~   67 (106)
                      |.+.+.||+|+||.||.+.+.         ...+++|.++..   .....+.+|+.++..+ +|+|++++.+.+. .+..
T Consensus        20 ~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   99 (307)
T cd05098          20 LVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL   99 (307)
T ss_pred             eEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence            567789999999999988653         245888887632   2344577788888888 7999999999884 4779


Q ss_pred             EEEEeecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      ++++||+.+|+|.+++....                .++......++.|++.||
T Consensus       100 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL  153 (307)
T cd05098         100 YVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGM  153 (307)
T ss_pred             EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHH
Confidence            99999999999999997643                234455566777776654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.50  E-value=4.4e-13  Score=81.72  Aligned_cols=104  Identities=35%  Similarity=0.452  Sum_probs=81.9

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~l   69 (106)
                      |...+.||+|+||.||.+...       +..+++|.++..   ...+.+.+|+.++..+ +|+|++++.+.+. .+..++
T Consensus        37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l  116 (302)
T cd05055          37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILV  116 (302)
T ss_pred             eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEE
Confidence            456788999999999988641       346888877532   2345678899999999 7999999999884 577999


Q ss_pred             EEeecCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+.+|+|.++++...  .++......++.|++.|+
T Consensus       117 v~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l  154 (302)
T cd05055         117 ITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGM  154 (302)
T ss_pred             EEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999997643  266777777888877664

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.50  E-value=3.1e-13  Score=80.27  Aligned_cols=104  Identities=32%  Similarity=0.572  Sum_probs=83.8

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |++.+.||+|++|.||++.+. +..+++|.+... .....+.+|+.+++.++||+++++.+.+ .....++++||+.+++
T Consensus         6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   85 (256)
T cd05112           6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGC   85 (256)
T ss_pred             eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCc
Confidence            566789999999999998776 677888987532 2234677899999999999999999988 4477899999999999


Q ss_pred             hHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++... ..++.+.+..++.|++.++
T Consensus        86 L~~~~~~~~~~~~~~~~~~~~~~l~~~l  113 (256)
T cd05112          86 LSDYLRAQRGKFSQETLLGMCLDVCEGM  113 (256)
T ss_pred             HHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence            99999764 3466777777887877654

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.50  E-value=3.4e-13  Score=81.86  Aligned_cols=104  Identities=31%  Similarity=0.484  Sum_probs=79.8

Q ss_pred             CCCceeEeecCcceEEEEEEC------------------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ------------------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYG   60 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~------------------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~   60 (106)
                      |++.+.||+|+||.||.+.+.                  +..+++|.+...   .....+.+|+.++..++|+|++++.+
T Consensus         7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~   86 (296)
T cd05095           7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLA   86 (296)
T ss_pred             ceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEE
Confidence            678899999999999987432                  235778877532   23456888999999999999999999


Q ss_pred             eE-ecCceEEEEeecCCCChHHHHhcCCC-----------CchhhhhhhhhccccCC
Q psy9377          61 AC-TGNPVCLVMEYAEGGSLYNELQRSSA-----------ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        61 ~~-~~~~~~lv~e~~~~g~l~~~l~~~~~-----------~~~~~~~~~~~qll~~~  105 (106)
                      .+ ..+..+++|||+++++|.+++.....           ++......++.|++.|+
T Consensus        87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al  143 (296)
T cd05095          87 VCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGM  143 (296)
T ss_pred             EEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHH
Confidence            88 45779999999999999999976432           22335667777776654

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.50  E-value=5.3e-13  Score=80.46  Aligned_cols=104  Identities=28%  Similarity=0.367  Sum_probs=79.2

Q ss_pred             CCCceeEeecCcceEEEEEEC------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~   71 (106)
                      |++.+.||+|+||.||++...      +..+++|.+...   .....+.+|+.++..++|+|++++.+.+. ....+++|
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   86 (283)
T cd05090           7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLF   86 (283)
T ss_pred             ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEE
Confidence            567789999999999998742      467888877532   23356788999999999999999999884 47789999


Q ss_pred             eecCCCChHHHHhcCC-----------------CCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSS-----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~-----------------~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++++|.+++....                 .++......++.|++.|+
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al  137 (283)
T cd05090          87 EYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGM  137 (283)
T ss_pred             EcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHH
Confidence            9999999999986322                 234444556667776654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.50  E-value=4.4e-13  Score=80.67  Aligned_cols=104  Identities=25%  Similarity=0.391  Sum_probs=84.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--Cc----eEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQ----YVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~----~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e   72 (106)
                      |...+.||+|+||.||++.+.  +.    .+++|.+..   ......+.+|...+..+.|+|++++.+.+.....+++++
T Consensus         9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~~~   88 (279)
T cd05109           9 LKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLVTQ   88 (279)
T ss_pred             eeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEEEE
Confidence            567789999999999999764  33    478887752   233456778888899999999999999887777889999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|++.+++..+ ..++......++.|++.|+
T Consensus        89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L  122 (279)
T cd05109          89 LMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGM  122 (279)
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            99999999999764 4577888888888988765

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=5.9e-13  Score=79.60  Aligned_cols=104  Identities=26%  Similarity=0.419  Sum_probs=84.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcC-CCCceeeeeeeEec-------CceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRV-SHPNIVKLYGACTG-------NPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-------~~~~lv   70 (106)
                      |++.+.||+|++|.+|.+...  +..+++|.+... .....+.+|+.++..+ .|+|++++.+.+..       ...+++
T Consensus         8 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv   87 (275)
T cd06608           8 FELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLV   87 (275)
T ss_pred             eeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEE
Confidence            778899999999999999876  678888887633 2345678899989888 69999999998832       238999


Q ss_pred             EeecCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      +||+++++|.+++..    +..+++..+..++.|++.|+
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al  126 (275)
T cd06608          88 MELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGL  126 (275)
T ss_pred             EEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence            999999999998875    24677888888989888775

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.49  E-value=5.8e-13  Score=79.94  Aligned_cols=104  Identities=27%  Similarity=0.404  Sum_probs=81.1

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |.+.+.||+|+||.||.+...       +..+++|.+...   .....+.+|+.++..++|+|++++++.+ .....+++
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v   87 (277)
T cd05032           8 ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVV   87 (277)
T ss_pred             eeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEE
Confidence            567789999999999998764       256888887532   2345677889999999999999999988 45779999


Q ss_pred             EeecCCCChHHHHhcCCC----------CchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSA----------ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~----------~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++.....          ++...+..++.|++.|+
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  132 (277)
T cd05032          88 MELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGM  132 (277)
T ss_pred             EecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999975321          34455667777877664

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.49  E-value=3.8e-13  Score=81.38  Aligned_cols=104  Identities=29%  Similarity=0.442  Sum_probs=82.8

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      |.+.+.+|+|+||.||.+...       +..+++|.+...  .....+.+|+.++..++|++++++.+.+ ..+..++++
T Consensus         7 ~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   86 (288)
T cd05093           7 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVF   86 (288)
T ss_pred             eeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence            556788999999999998642       245778877532  3345688899999999999999999988 457899999


Q ss_pred             eecCCCChHHHHhcCC-------------CCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSS-------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~-------------~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++++|.+++....             .+++.....++.|++.|+
T Consensus        87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL  133 (288)
T cd05093          87 EYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGM  133 (288)
T ss_pred             EcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999997543             266777778888888765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.49  E-value=2.7e-13  Score=82.04  Aligned_cols=103  Identities=20%  Similarity=0.269  Sum_probs=80.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      |...+.||+|++|.||.+...  +..+++|.+....   ....+.+|+..+..++|+|++++.+.+. .+..++++||+.
T Consensus         7 y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~   86 (291)
T cd07870           7 YLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH   86 (291)
T ss_pred             eEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc
Confidence            677899999999999999875  7889999875321   1235667888999999999999999884 467899999996


Q ss_pred             CCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                       +++.+++... ..++...++.++.|++.|+
T Consensus        87 -~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L  116 (291)
T cd07870          87 -TDLAQYMIQHPGGLHPYNVRLFMFQLLRGL  116 (291)
T ss_pred             -CCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence             5777777543 3456677778888888765

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.49  E-value=6.5e-13  Score=79.47  Aligned_cols=104  Identities=27%  Similarity=0.393  Sum_probs=81.1

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-C------
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-N------   65 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~------   65 (106)
                      |...+.||+|+||.||.+...     +..+++|.+...    .....+.+|+..+..++|+|++++.+.+.. .      
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            567889999999999998764     256899987532    223567889999999999999999988732 2      


Q ss_pred             ceEEEEeecCCCChHHHHhcC------CCCchhhhhhhhhccccCC
Q psy9377          66 PVCLVMEYAEGGSLYNELQRS------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        66 ~~~lv~e~~~~g~l~~~l~~~------~~~~~~~~~~~~~qll~~~  105 (106)
                      ..++++||+++|+|.+++...      ..++...+..++.|++.||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL  126 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM  126 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHH
Confidence            379999999999999998542      2456677778888888765

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.49  E-value=9.1e-14  Score=83.71  Aligned_cols=103  Identities=21%  Similarity=0.373  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|.+|.||++.+.  +..+++|.++..    .....+.+|+.++..++|+|++++.+.+ ..+..++++||+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            788899999999999999886  778999987532    1224566789999999999999999988 457899999999


Q ss_pred             CCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+ ++.+++.. ...++++.+..++.|++.|+
T Consensus        82 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al  112 (284)
T cd07839          82 DQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGL  112 (284)
T ss_pred             CC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            75 78888765 45678888899999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.49  E-value=8.9e-13  Score=79.71  Aligned_cols=103  Identities=25%  Similarity=0.378  Sum_probs=84.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |...+.||+|++|.+|.+...  +..+++|.++..  .....+.+|+.++..++|+|++++.+.+ ..+..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            345578999999999999765  678899877522  2345577889999999999999999988 45889999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++.. ..++.+....++.|++.|+
T Consensus       101 ~~L~~~~~~-~~~~~~~~~~~~~ql~~~l  128 (285)
T cd06648         101 GALTDIVTH-TRMNEEQIATVCLAVLKAL  128 (285)
T ss_pred             CCHHHHHHh-CCCCHHHHHHHHHHHHHHH
Confidence            999999987 4577777788888888765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.48  E-value=2.1e-13  Score=93.67  Aligned_cols=98  Identities=26%  Similarity=0.348  Sum_probs=76.8

Q ss_pred             CCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCCh
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGSL   79 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l   79 (106)
                      +..+.+|+|+||.||++...  +..+++|.+.....  ....|+..+..++|||++++++.+. .+..++||||+++|+|
T Consensus       693 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L  770 (968)
T PLN00113        693 KEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNL  770 (968)
T ss_pred             CcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcH
Confidence            44568999999999999875  78899998753221  1123577788999999999999994 5778999999999999


Q ss_pred             HHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .++++.   ++......++.|+..|+
T Consensus       771 ~~~l~~---l~~~~~~~i~~~ia~~L  793 (968)
T PLN00113        771 SEVLRN---LSWERRRKIAIGIAKAL  793 (968)
T ss_pred             HHHHhc---CCHHHHHHHHHHHHHHH
Confidence            999964   55666667777776654

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.48  E-value=2.8e-13  Score=83.51  Aligned_cols=101  Identities=21%  Similarity=0.254  Sum_probs=82.5

Q ss_pred             CceeEeecCcceEEEEEEC--CceEEEEEecCHHHH----------------HHHHHHHHHHhcCCCCceeeeeeeE-ec
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAER----------------KAFAVEVRQLSRVSHPNIVKLYGAC-TG   64 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~----------------~~~~~~~~~~~~~~~~~i~~~~~~~-~~   64 (106)
                      +.+.||+|++|.||++.+.  +..+++|.+......                ..+.+|+.++..++|+|++++.+.+ ..
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   92 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG   92 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence            3467999999999999876  788999987532111                1466889999999999999999988 45


Q ss_pred             CceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          65 NPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        65 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +..+++||++. |++.+++.....++++....++.|++.|+
T Consensus        93 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL  132 (335)
T PTZ00024         93 DFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGL  132 (335)
T ss_pred             CcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            78999999996 58999998877788888889999988775

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.48  E-value=5.7e-13  Score=79.94  Aligned_cols=95  Identities=22%  Similarity=0.257  Sum_probs=73.7

Q ss_pred             EeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhc-CCCCceeeeeeeE-ecCceEEEEeecCCCChHHHH
Q psy9377           8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSR-VSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNEL   83 (106)
Q Consensus         8 lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l~~~l   83 (106)
                      +|+|+||.||.+...  +..+++|.+.......   .|...... .+|+|++++.+.+ ..+..+++|||+++++|.+++
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l  100 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLL  100 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHH
Confidence            599999999999876  6778888875432111   12222222 2699999999998 457899999999999999999


Q ss_pred             hcCCCCchhhhhhhhhccccCC
Q psy9377          84 QRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        84 ~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ..+..++++.+..++.|++.|+
T Consensus       101 ~~~~~l~~~~~~~~~~qi~~~l  122 (267)
T PHA03390        101 KKEGKLSEAEVKKIIRQLVEAL  122 (267)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHH
Confidence            8877788999999999998775

>KOG0690|consensus

Probab=99.48  E-value=7.3e-15  Score=89.44  Aligned_cols=104  Identities=30%  Similarity=0.389  Sum_probs=88.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |..++.||+|.||.|..++.+  +..+++|++++.     +....-+.|.++++..+||.++.+.-.| +.+.+|+||||
T Consensus       170 FdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMey  249 (516)
T KOG0690|consen  170 FDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEY  249 (516)
T ss_pred             hhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEE
Confidence            556789999999999998766  788999988643     2334456788899999999999886666 55889999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ..||+|+..+++...++++.+++|-..|++||
T Consensus       250 anGGeLf~HLsrer~FsE~RtRFYGaEIvsAL  281 (516)
T KOG0690|consen  250 ANGGELFFHLSRERVFSEDRTRFYGAEIVSAL  281 (516)
T ss_pred             ccCceEeeehhhhhcccchhhhhhhHHHHHHh
Confidence            99999999999988899999999999988876

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.48  E-value=7.5e-13  Score=79.72  Aligned_cols=104  Identities=25%  Similarity=0.426  Sum_probs=82.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-------cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRV-SHPNIVKLYGACT-------GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-------~~~~~lv   70 (106)
                      |++.+.+|+|+||.||.+.+.  +..+++|.+... .....+..|+.++..+ .|+|++++.+.+.       ....+++
T Consensus        18 ~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv   97 (282)
T cd06636          18 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLV   97 (282)
T ss_pred             hhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEE
Confidence            677889999999999999876  678899987533 2344567788888887 6999999998872       2468999


Q ss_pred             EeecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+.+|+|.+++...  ..+++..+..++.|++.|+
T Consensus        98 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al  134 (282)
T cd06636          98 MEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGL  134 (282)
T ss_pred             EEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999763  3466777778888888765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.48  E-value=5.1e-13  Score=79.97  Aligned_cols=104  Identities=24%  Similarity=0.408  Sum_probs=82.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcC-CCCceeeeeeeEec-------CceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRV-SHPNIVKLYGACTG-------NPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-------~~~~lv   70 (106)
                      |+..+.||+|+||.||.+...  +..+++|.+... .....+..|+..+..+ +|+|++++.+.+..       ...+++
T Consensus         8 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv   87 (272)
T cd06637           8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV   87 (272)
T ss_pred             hhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEE
Confidence            677788999999999999876  678899987532 2234567788888887 69999999998831       358999


Q ss_pred             EeecCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      +||+.+++|.+++....  .+++..+..++.|++.|+
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l  124 (272)
T cd06637          88 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL  124 (272)
T ss_pred             EEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999998643  467777888888887764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.48  E-value=1.9e-13  Score=81.28  Aligned_cols=98  Identities=27%  Similarity=0.390  Sum_probs=82.2

Q ss_pred             EeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCCh
Q psy9377           8 VGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGSL   79 (106)
Q Consensus         8 lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l   79 (106)
                      ||+|++|.+|.+.+.  +..+++|.+...     .....+.+|+..+..++|+|++++.+.+. ....++++|++++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            588999999999886  788999988533     23456778888999999999999988874 4678999999999999


Q ss_pred             HHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++.+...+++.....++.|++.||
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L  106 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLAL  106 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99998866778888888999988765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.48  E-value=6.6e-13  Score=80.36  Aligned_cols=104  Identities=29%  Similarity=0.390  Sum_probs=79.9

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~l   69 (106)
                      |+..+.||+|++|.||++...       ...+++|.+...   .....+.+|+.++..+ +|+|++++.+.+. .+..++
T Consensus        14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l   93 (293)
T cd05053          14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYV   93 (293)
T ss_pred             eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEE
Confidence            566789999999999998764       246788877532   2234577888888888 7999999999884 577999


Q ss_pred             EEeecCCCChHHHHhcC----------------CCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRS----------------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++|+|.++++..                ..++......++.|++.|+
T Consensus        94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al  145 (293)
T cd05053          94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGM  145 (293)
T ss_pred             EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHH
Confidence            99999999999999653                2345555566777877664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG4278|consensus

Probab=99.48  E-value=3.1e-14  Score=92.91  Aligned_cols=100  Identities=27%  Similarity=0.502  Sum_probs=79.1

Q ss_pred             ceeEeecCcceEEEEEEC--CceEEEEEecC-HHHHHHHHHHHHHHhcCCCCceeeeeeeEec-CceEEEEeecCCCChH
Q psy9377           5 SKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTG-NPVCLVMEYAEGGSLY   80 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~lv~e~~~~g~l~   80 (106)
                      .++||-|.||.||.+.++  ...+++|.++. .....+|+.|..+|+.++|||++++.++|+. ...|||+|||.+|+|.
T Consensus       272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLL  351 (1157)
T KOG4278|consen  272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLL  351 (1157)
T ss_pred             eeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHH
Confidence            467999999999999887  67899998863 3456889999999999999999999999964 6789999999999999


Q ss_pred             HHHhcCCCC-chhhhh-hhhhccccC
Q psy9377          81 NELQRSSAA-SLKFCK-IYLPFWFSS  104 (106)
Q Consensus        81 ~~l~~~~~~-~~~~~~-~~~~qll~~  104 (106)
                      +||+..... ....+. .+..||-+|
T Consensus       352 dYLRecnr~ev~avvLlyMAtQIsSa  377 (1157)
T KOG4278|consen  352 DYLRECNRSEVPAVVLLYMATQISSA  377 (1157)
T ss_pred             HHHHHhchhhcchhHHHHHHHHHHHH
Confidence            999975421 122222 334555544

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.48  E-value=6.7e-13  Score=81.10  Aligned_cols=101  Identities=24%  Similarity=0.335  Sum_probs=78.1

Q ss_pred             CceeEeecCcceEEEEEEC----CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEEEeecCC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ----NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLVMEYAEG   76 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv~e~~~~   76 (106)
                      ..+.||+|+||.||++...    +..+++|.+........+.+|+.++..++|||++++.+.+.   ....++++||+.+
T Consensus         5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            3468999999999999864    36789998865444456778999999999999999999872   3568999999865


Q ss_pred             CChHHHHhcC---------CCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRS---------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~---------~~~~~~~~~~~~~qll~~~  105 (106)
                       ++.+++...         ..+++..+..++.|++.|+
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL  121 (317)
T cd07867          85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGI  121 (317)
T ss_pred             -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHH
Confidence             787777532         1355666778888888765

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0199|consensus

Probab=99.47  E-value=2.8e-14  Score=93.68  Aligned_cols=102  Identities=28%  Similarity=0.481  Sum_probs=83.8

Q ss_pred             CceeEeecCcceEEEEEEC---C--ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ---N--QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAE   75 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~---~--~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~   75 (106)
                      ..+.||+|+||.|+++.+.   |  ..|++|+++..   ..-.+|.+|+.+|..++|+|+++++++..+....+|+|+++
T Consensus       114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELap  193 (1039)
T KOG0199|consen  114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAP  193 (1039)
T ss_pred             HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhcc
Confidence            3578999999999999886   3  46899998632   24568999999999999999999999998888999999999


Q ss_pred             CCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .|+|.+.|++..  .+.......|+.||..|+
T Consensus       194 lGSLldrLrka~~~~llv~~Lcdya~QiA~aM  225 (1039)
T KOG0199|consen  194 LGSLLDRLRKAKKAILLVSRLCDYAMQIAKAM  225 (1039)
T ss_pred             cchHHHHHhhccccceeHHHHHHHHHHHHHHH
Confidence            999999998732  455666677888876553

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.47  E-value=2.5e-13  Score=85.48  Aligned_cols=100  Identities=22%  Similarity=0.223  Sum_probs=82.5

Q ss_pred             CCCceeEeecCcceEEEEEEC----CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ----NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |.+.+.||+|+||.||.+...    +..+++|.+...   ....+|+.++..++|+|++++.+.+ .....+++||++. 
T Consensus        94 y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-  169 (392)
T PHA03207         94 YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-  169 (392)
T ss_pred             eEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-
Confidence            677889999999999998754    456788877532   2345789999999999999999888 4577999999985 


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++.+++.....++...+..++.|++.||
T Consensus       170 ~~l~~~l~~~~~l~~~~~~~i~~ql~~aL  198 (392)
T PHA03207        170 CDLFTYVDRSGPLPLEQAITIQRRLLEAL  198 (392)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            58999997777788999999999998875

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.47  E-value=1.2e-12  Score=79.19  Aligned_cols=104  Identities=23%  Similarity=0.320  Sum_probs=81.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcC-CCCceeeeeeeEec------CceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRV-SHPNIVKLYGACTG------NPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~------~~~~lv~   71 (106)
                      |.+.+.||+|++|.||++...  +..+++|.+... .....+.+|+.++..+ +|+|++++.+.+..      +..++++
T Consensus        24 y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~  103 (291)
T cd06639          24 WEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVL  103 (291)
T ss_pred             eEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEE
Confidence            667789999999999999875  678899987532 2334566788888887 79999999998832      3589999


Q ss_pred             eecCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++++|.++++.    ...+++.....++.|++.|+
T Consensus       104 ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al  141 (291)
T cd06639         104 ELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGL  141 (291)
T ss_pred             EECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHH
Confidence            99999999998863    34567778788888887765

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.47  E-value=7.5e-14  Score=83.19  Aligned_cols=100  Identities=24%  Similarity=0.387  Sum_probs=77.2

Q ss_pred             eeEeecCcceEEEEEEC--C-------ceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           6 KIVGQGAFGVVWKGLWQ--N-------QYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~-------~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      +.||+|+||.||++...  +       ..+++|.....  ...+.+.+|..++..++|||++++.+.+. ....+++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            36899999999998764  2       13555555332  22356777888999999999999999884 4778999999


Q ss_pred             cCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.++++.++ .++......++.|++.|+
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l  113 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWAL  113 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999998654 466777778888888765

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.47  E-value=9.2e-13  Score=82.00  Aligned_cols=101  Identities=26%  Similarity=0.258  Sum_probs=80.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|||++++.+.+..       ...+
T Consensus        23 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~  102 (359)
T cd07876          23 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVY  102 (359)
T ss_pred             eEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeE
Confidence            677899999999999999876  788999988532    234567789999999999999999998832       2479


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+.+ ++.+.+..  .++.+.+..++.|++.||
T Consensus       103 lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L  136 (359)
T cd07876         103 LVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGI  136 (359)
T ss_pred             EEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHH
Confidence            99999976 67666643  366777788888888775

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.47  E-value=7.3e-13  Score=80.05  Aligned_cols=85  Identities=38%  Similarity=0.638  Sum_probs=70.1

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |+..+.||+|+||.||.+...       +..+++|.+...   .....+.+|+.++..+.|+|++++.+.+. ....+++
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv   86 (288)
T cd05050           7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLL   86 (288)
T ss_pred             ceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEE
Confidence            677889999999999998753       457888887532   23456788999999999999999999884 4678999


Q ss_pred             EeecCCCChHHHHhcC
Q psy9377          71 MEYAEGGSLYNELQRS   86 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~   86 (106)
                      +||+++|+|.+++...
T Consensus        87 ~e~~~~~~L~~~l~~~  102 (288)
T cd05050          87 FEYMAYGDLNEFLRHR  102 (288)
T ss_pred             EecCCCCCHHHHHHHc
Confidence            9999999999999753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.47  E-value=4e-13  Score=81.15  Aligned_cols=104  Identities=20%  Similarity=0.309  Sum_probs=83.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCHH------HHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETEA------ERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~~------~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~   68 (106)
                      |++.+.||+|++|.||.+...     +..+++|.+....      ....+.+|+.++..+ .|++++++.+.+. ....+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            678899999999999988653     4678999875321      234567788888988 5899999988884 46789


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+.+|+|.+++.....++...+..++.|++.+|
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l  118 (288)
T cd05583          82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLAL  118 (288)
T ss_pred             EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHH
Confidence            9999999999999998766677888888888887764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.47  E-value=8.6e-13  Score=80.17  Aligned_cols=104  Identities=26%  Similarity=0.465  Sum_probs=80.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--C--ceEEEEEecC---HHHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N--QYVAVKHIET---EAERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~--~~~~~k~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |++.+.||+|+||.||.+...  +  ..+++|.++.   ....+.+.+|+.++..+ +|||++++.+.+ ..+..++++|
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e   83 (297)
T cd05089           4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIE   83 (297)
T ss_pred             ceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEE
Confidence            678889999999999999765  2  2356666642   22345678899888888 799999999988 4477999999


Q ss_pred             ecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      |+++++|.++++...                .++...+..++.|++.|+
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al  132 (297)
T cd05089          84 YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGM  132 (297)
T ss_pred             ecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHH
Confidence            999999999997543                245566677778877664

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0193|consensus

Probab=99.47  E-value=1.4e-13  Score=88.78  Aligned_cols=102  Identities=29%  Similarity=0.512  Sum_probs=83.6

Q ss_pred             CCceeEeecCcceEEEEEECCceEEEEEec----CHHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCC
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGS   78 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~   78 (106)
                      .....||+|+||+||++.+.|. ||+|.++    .....+.|.+|+.++++-+|.||+-+.+++..+...||+.+|+|-+
T Consensus       395 ~l~~rIGsGsFGtV~Rg~whGd-VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeGsS  473 (678)
T KOG0193|consen  395 LLGERIGSGSFGTVYRGRWHGD-VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEGSS  473 (678)
T ss_pred             hccceeccccccceeecccccc-eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccCch
Confidence            3567899999999999988865 8889875    3345678999999999999999999999997766799999999999


Q ss_pred             hHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      |+.+++... .+..-....+++|+..+.
T Consensus       474 LY~hlHv~etkfdm~~~idIAqQiaqGM  501 (678)
T KOG0193|consen  474 LYTHLHVQETKFDMNTTIDIAQQIAQGM  501 (678)
T ss_pred             hhhhccchhhhhhHHHHHHHHHHHHHhh
Confidence            999998643 355555567777776553

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.46  E-value=1e-12  Score=79.54  Aligned_cols=104  Identities=32%  Similarity=0.472  Sum_probs=81.2

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      |...+.||+|++|.||.+...       ...+++|.+...  .....+.+|+..+..++|+|++++.+.+ ..+..+++|
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   86 (291)
T cd05094           7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVF   86 (291)
T ss_pred             eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEE
Confidence            456788999999999998743       234677776533  2345688899999999999999999988 457799999


Q ss_pred             eecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++++|.+++..+.                .++......++.|++.|+
T Consensus        87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al  136 (291)
T cd05094          87 EYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGM  136 (291)
T ss_pred             ecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999997542                255666778888887765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.46  E-value=6e-13  Score=81.92  Aligned_cols=100  Identities=21%  Similarity=0.181  Sum_probs=80.5

Q ss_pred             eeEeec--CcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           6 KIVGQG--AFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         6 ~~lg~g--~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      ..||+|  +|+.||.+.+.  +..+++|.+...    ...+.+.+|+.++..++|+|++++++.+ .++..++++||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            356666  88999999875  789999987532    2345677888888889999999999999 45778999999999


Q ss_pred             CChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      +++.+++++..  .+++..+..++.|++.||
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL  114 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGL  114 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence            99999998643  467777788888988775

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.46  E-value=8.6e-13  Score=80.50  Aligned_cols=103  Identities=24%  Similarity=0.302  Sum_probs=82.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |...+.||+|++|.||.+...  +..+++|.+...     .....+.+|+.++..++|||++++.+.+ ..+..++++||
T Consensus        17 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   96 (307)
T cd06607          17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEY   96 (307)
T ss_pred             hhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHh
Confidence            677889999999999999875  788999987521     2335678899999999999999999998 45778999999


Q ss_pred             cCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+ ++.+++.. .+.+++..+..++.|++.|+
T Consensus        97 ~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L  128 (307)
T cd06607          97 CLG-SASDILEVHKKPLQEVEIAAICHGALQGL  128 (307)
T ss_pred             hCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHH
Confidence            975 77777754 34577888888888887765

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.46  E-value=1.4e-12  Score=78.98  Aligned_cols=84  Identities=39%  Similarity=0.614  Sum_probs=68.4

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++...       ...+++|.+...   .....+.+|+..+..++|||++++.+.+. .+..+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            677889999999999998753       145777776532   23456788999999999999999999884 5778999


Q ss_pred             EeecCCCChHHHHhc
Q psy9377          71 MEYAEGGSLYNELQR   85 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~   85 (106)
                      +||+.+++|.+++..
T Consensus        82 ~e~~~~~~L~~~l~~   96 (290)
T cd05045          82 VEYAKYGSLRSFLRE   96 (290)
T ss_pred             EEecCCCCHHHHHHh
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.46  E-value=6e-13  Score=80.59  Aligned_cols=103  Identities=22%  Similarity=0.302  Sum_probs=83.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----HHHHHHHHHHHHhcCCCCceeeeeeeE-ec--CceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TG--NPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~--~~~~lv~e   72 (106)
                      |+..+.||+|.+|.||++.+.  +..+++|.++...    ....+.+|+..+..++|||++++.+.+ ..  +..++++|
T Consensus         7 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e   86 (293)
T cd07843           7 YEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVME   86 (293)
T ss_pred             hhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEeh
Confidence            667889999999999999886  6778888875321    123456788899999999999999887 34  78999999


Q ss_pred             ecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      |+.+ +|.+++.... .+++.....++.|++.||
T Consensus        87 ~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL  119 (293)
T cd07843          87 YVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGV  119 (293)
T ss_pred             hcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            9975 8999887643 478888889999998875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG4721|consensus

Probab=99.46  E-value=1.5e-13  Score=88.75  Aligned_cols=96  Identities=27%  Similarity=0.481  Sum_probs=78.5

Q ss_pred             CceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEec-CceEEEEeecCCCChHHH
Q psy9377           4 GSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG-NPVCLVMEYAEGGSLYNE   82 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~lv~e~~~~g~l~~~   82 (106)
                      -+++||+|+-|.|+.++.++..|++|.++.-     -..++..++.++|+||+.+.++|++ .=++||||||..|-|++.
T Consensus       128 ELeWlGSGaQGAVF~Grl~netVAVKKV~el-----kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V  202 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRLHNETVAVKKVREL-----KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV  202 (904)
T ss_pred             hhhhhccCcccceeeeeccCceehhHHHhhh-----hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence            4578999999999999999999999976421     1246777899999999999999976 458999999999999999


Q ss_pred             HhcCCCCchhhhhhhhhccccC
Q psy9377          83 LQRSSAASLKFCKIYLPFWFSS  104 (106)
Q Consensus        83 l~~~~~~~~~~~~~~~~qll~~  104 (106)
                      |+..+.++......|..+|..+
T Consensus       203 Lka~~~itp~llv~Wsk~IA~G  224 (904)
T KOG4721|consen  203 LKAGRPITPSLLVDWSKGIAGG  224 (904)
T ss_pred             HhccCccCHHHHHHHHHHhhhh
Confidence            9988777766666666665543

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.46  E-value=7.8e-13  Score=79.11  Aligned_cols=100  Identities=23%  Similarity=0.294  Sum_probs=78.4

Q ss_pred             eeEeecCcceEEEEEEC--------------CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceE
Q psy9377           6 KIVGQGAFGVVWKGLWQ--------------NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVC   68 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--------------~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~   68 (106)
                      +.||+|++|.||.+...              ...+++|.++..  .....+.+++.++..++|||++++.+.+. ....+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            36899999999998743              124677776533  23446677888899999999999999884 46789


Q ss_pred             EEEeecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +++||+++|+|..++... ..++......++.|++.|+
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l  118 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASAL  118 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999888754 4577888888889988775

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.46  E-value=4.8e-13  Score=79.32  Aligned_cols=104  Identities=30%  Similarity=0.432  Sum_probs=83.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |++.+.+|+|+++.+|.+...  +..+++|.+...    .....+..|+.+++.++|+|++++.+.+ .....++++|++
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA   81 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence            778899999999999998776  678899887532    2345667888999999999999999887 457799999999


Q ss_pred             CCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|.+++.+    ...+++..+..++.|++.|+
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al  116 (256)
T cd08530          82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGL  116 (256)
T ss_pred             CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999876    23466667778888877664

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.46  E-value=4.3e-13  Score=80.81  Aligned_cols=103  Identities=30%  Similarity=0.432  Sum_probs=83.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|++|.||++.+.  +..+++|.++..    .....+.+|+..+..++|+|++++.+.+ ..+..+++|||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (284)
T cd07860           2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL   81 (284)
T ss_pred             ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence            778899999999999999876  778999987532    1234677899999999999999999988 457899999999


Q ss_pred             CCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      . +++.+++...  ..++...+..++.|++.|+
T Consensus        82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l  113 (284)
T cd07860          82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGL  113 (284)
T ss_pred             c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            6 5898888653  3467777888888887765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.46  E-value=6.6e-13  Score=78.92  Aligned_cols=100  Identities=29%  Similarity=0.464  Sum_probs=81.4

Q ss_pred             eeEeecCcceEEEEEEC---C--ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ---N--QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~---~--~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g   77 (106)
                      +.||+|++|.||++.+.   +  ..+++|.+...   .....+.+|+..+..++|+|++++.+.+.....++++|+++++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG   80 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence            36899999999998764   2  35888988643   3356788899999999999999999988558899999999999


Q ss_pred             ChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++....  .++......++.|++.||
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L  110 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGM  110 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHH
Confidence            9999998754  466777778888888765

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.46  E-value=6.5e-13  Score=79.98  Aligned_cols=103  Identities=27%  Similarity=0.395  Sum_probs=84.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |+..+.||+|.+|.||++.+.  +..+++|.+...    .....+.+|+..+..++|+|++++.+.+. .+..++++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            678899999999999999875  788999987532    12345778999999999999999999884 57799999999


Q ss_pred             CCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      . +++.+++....  .+++.....++.|++.||
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L  112 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGI  112 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHH
Confidence            5 58999987654  577788888888888765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.45  E-value=5.6e-13  Score=80.96  Aligned_cols=101  Identities=23%  Similarity=0.359  Sum_probs=82.1

Q ss_pred             CceeEeecCcceEEEEEEC--CceEEEEEecC--HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      ....||+|++|.||.+...  +..+++|.+..  ......+.+|+..+..++|+|++++.+.+ ..+..+++|||+++++
T Consensus        24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  103 (292)
T cd06657          24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA  103 (292)
T ss_pred             hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence            3457999999999998775  77899998752  23345678899999999999999999988 5688999999999999


Q ss_pred             hHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++... .++++....++.|++.++
T Consensus       104 L~~~~~~~-~~~~~~~~~~~~ql~~~l  129 (292)
T cd06657         104 LTDIVTHT-RMNEEQIAAVCLAVLKAL  129 (292)
T ss_pred             HHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence            99887653 467777888888888765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.45  E-value=7.3e-13  Score=84.61  Aligned_cols=101  Identities=22%  Similarity=0.299  Sum_probs=78.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEec---------CceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG---------NPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~~~lv   70 (106)
                      |...+.||+|+||.||++...  +..+++|.+....  ....+|+.++..++|+|++++.+.+..         ..++++
T Consensus        68 y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lv  145 (440)
T PTZ00036         68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVV  145 (440)
T ss_pred             EEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEE
Confidence            667889999999999999875  6789999874321  223468889999999999999887621         136789


Q ss_pred             EeecCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++ ++.+++..    ...++...++.++.|++.||
T Consensus       146 mE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL  183 (440)
T PTZ00036        146 MEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRAL  183 (440)
T ss_pred             EecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence            999975 77777652    34677888888999998775

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.45  E-value=9.4e-13  Score=78.92  Aligned_cols=99  Identities=26%  Similarity=0.363  Sum_probs=73.8

Q ss_pred             eEeecCcceEEEEEEC-C---ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           7 IVGQGAFGVVWKGLWQ-N---QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~-~---~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      .||+|+||.||.+... +   ...++|.+..   ......+.+|+..+..++|||++++.+.+ .....+++|||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            5899999999998643 2   2345555432   23345788888889999999999999988 4577899999999999


Q ss_pred             hHHHHhcCC----CCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSS----AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~----~~~~~~~~~~~~qll~~~  105 (106)
                      |.++++...    ..+......++.|++.||
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al  112 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGV  112 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHH
Confidence            999997642    233445566777777664

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.45  E-value=1.1e-12  Score=80.94  Aligned_cols=85  Identities=32%  Similarity=0.503  Sum_probs=68.9

Q ss_pred             CCCceeEeecCcceEEEEEEC---------CceEEEEEecC---HHHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---------NQYVAVKHIET---EAERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---------~~~~~~k~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~   67 (106)
                      |.+.+.||+|+||.||.+.+.         ...+++|.+..   ......+.+|+.++..+ +|+|++++.+.+. .+..
T Consensus        14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~   93 (334)
T cd05100          14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL   93 (334)
T ss_pred             eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCce
Confidence            677889999999999998642         12578887753   22345678899999988 7999999999884 4779


Q ss_pred             EEEEeecCCCChHHHHhcC
Q psy9377          68 CLVMEYAEGGSLYNELQRS   86 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~   86 (106)
                      ++++||+++|+|.+++...
T Consensus        94 ~lv~e~~~~g~L~~~l~~~  112 (334)
T cd05100          94 YVLVEYASKGNLREYLRAR  112 (334)
T ss_pred             EEEEecCCCCcHHHHHHhc
Confidence            9999999999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.45  E-value=1.4e-12  Score=78.45  Aligned_cols=104  Identities=24%  Similarity=0.297  Sum_probs=81.9

Q ss_pred             CCCceeEeecCcceEEEEEEC------CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe--cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ------NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT--GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~lv   70 (106)
                      |...+.||+|+||.||.+.+.      +..+++|.+..   ......+.+|+.++..++|+|++++.+.+.  ....+++
T Consensus         8 ~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   87 (280)
T cd05043           8 VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVL   87 (280)
T ss_pred             eEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEE
Confidence            567789999999999999765      35677777652   233456788999999999999999999873  3678999


Q ss_pred             EeecCCCChHHHHhcC--------CCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS--------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~--------~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++.+++|.+++...        ..++......++.|++.|+
T Consensus        88 ~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l  130 (280)
T cd05043          88 YPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGM  130 (280)
T ss_pred             EEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHH
Confidence            9999999999999753        2366777778888887765

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PTZ00284 protein kinase; Provisional

Probab=99.45  E-value=9.2e-13  Score=84.63  Aligned_cols=103  Identities=17%  Similarity=0.225  Sum_probs=78.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCC------CCceeeeeeeEe--cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVS------HPNIVKLYGACT--GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~--~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++.. ........|+.++..+.      +.+++.+.+.+.  .++.+++
T Consensus       131 y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv  210 (467)
T PTZ00284        131 FKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIV  210 (467)
T ss_pred             EEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEE
Confidence            567789999999999999876  678999998632 22334455666555543      445788888774  3578999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++ +++|.+++.+.+.+++..+..++.|++.||
T Consensus       211 ~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL  244 (467)
T PTZ00284        211 MPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVAL  244 (467)
T ss_pred             Eecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9988 678999998877888888899999998875

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.45  E-value=5.4e-13  Score=82.54  Aligned_cols=84  Identities=39%  Similarity=0.584  Sum_probs=68.0

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe--cCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT--GNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~--~~~~~   68 (106)
                      |++.+.||+|+||.||.+...       +..+++|.++..   .....+..|+.++..+ +|+|++++.+.+.  ...++
T Consensus         9 ~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~   88 (337)
T cd05054           9 LKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLM   88 (337)
T ss_pred             hhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEE
Confidence            678899999999999998642       357999987632   2334567788888888 7999999999873  36689


Q ss_pred             EEEeecCCCChHHHHhc
Q psy9377          69 LVMEYAEGGSLYNELQR   85 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~   85 (106)
                      +++||+++++|.+++..
T Consensus        89 ~v~ey~~~~~L~~~i~~  105 (337)
T cd05054          89 VIVEYCKFGNLSNYLRS  105 (337)
T ss_pred             EEEecCCCCCHHHHHHh
Confidence            99999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.45  E-value=1.3e-12  Score=79.55  Aligned_cols=104  Identities=27%  Similarity=0.364  Sum_probs=78.5

Q ss_pred             CCCceeEeecCcceEEEEEEC---------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~   67 (106)
                      |.+.+.||+|+||.||.+...         +..+++|.+...   ...+.+.+|+..+..+ +|+|++++.+.+. ....
T Consensus        17 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~   96 (304)
T cd05101          17 LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL   96 (304)
T ss_pred             eeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCce
Confidence            567789999999999988642         236788877532   2345678899999988 7999999999884 4778


Q ss_pred             EEEEeecCCCChHHHHhcCCC----------------CchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSSA----------------ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~~----------------~~~~~~~~~~~qll~~~  105 (106)
                      +++|||+++|+|.+++.....                ++......++.|++.|+
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al  150 (304)
T cd05101          97 YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGM  150 (304)
T ss_pred             EEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHH
Confidence            999999999999999976432                23334455666777654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.45  E-value=1e-12  Score=80.06  Aligned_cols=104  Identities=25%  Similarity=0.457  Sum_probs=82.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--Cc----eEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQ----YVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~----~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e   72 (106)
                      |+..+.||+|+||.||++.+.  +.    .+++|.+...   .....+.+|+.++..++|+|++++.+.+.....+++++
T Consensus         9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e   88 (303)
T cd05110           9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQ   88 (303)
T ss_pred             ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceeeeh
Confidence            566788999999999999764  32    4677766532   22345778889999999999999999886666789999


Q ss_pred             ecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|++.+++..+. .++...+..++.|++.||
T Consensus        89 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L  122 (303)
T cd05110          89 LMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGM  122 (303)
T ss_pred             hcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            999999999997643 467777788888887765

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.45  E-value=1.8e-12  Score=79.38  Aligned_cols=104  Identities=27%  Similarity=0.344  Sum_probs=78.6

Q ss_pred             CCCceeEeecCcceEEEEEEC---------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~   67 (106)
                      |.+.+.||+|++|.||.+...         ...+++|.+...   .....+..|+..+..+ .|+|++++.+.+. .+..
T Consensus        14 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~   93 (314)
T cd05099          14 LVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPL   93 (314)
T ss_pred             eeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCce
Confidence            567789999999999998642         345788877532   2345677888888888 6999999999884 4678


Q ss_pred             EEEEeecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      ++++||+++|+|.+++....                .++......++.|++.|+
T Consensus        94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL  147 (314)
T cd05099          94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGM  147 (314)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHH
Confidence            99999999999999997632                234444556677777654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.45  E-value=1e-12  Score=79.11  Aligned_cols=103  Identities=25%  Similarity=0.372  Sum_probs=84.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-c--CceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-G--NPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--~~~~lv~e   72 (106)
                      |++.+.+|+|++|.||++...  +..+++|.+...    .....+.+|+.++..++|+|++++.+.+. .  +..++++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            678899999999999999876  678999988633    23456778999999999999999999884 3  57999999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++ ++.+++... ..+++..+..++.|++.|+
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al  113 (287)
T cd07840          81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGL  113 (287)
T ss_pred             cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            9975 898888765 4677888888999888765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.44  E-value=1.3e-12  Score=79.19  Aligned_cols=103  Identities=26%  Similarity=0.389  Sum_probs=81.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|.+|.+|++...  +..+++|.+...    .....+.+|+.+++.++|+|++++.+.+ ..+..++++||+
T Consensus         4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (294)
T PLN00009          4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL   83 (294)
T ss_pred             eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecc
Confidence            677889999999999999876  678999987532    1234577899999999999999999998 457899999999


Q ss_pred             CCCChHHHHhcCCC--CchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSA--ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~--~~~~~~~~~~~qll~~~  105 (106)
                      .+ ++.+++.....  .+...+..++.|++.|+
T Consensus        84 ~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL  115 (294)
T PLN00009         84 DL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGI  115 (294)
T ss_pred             cc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHH
Confidence            64 88888865443  35566677888887765

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.44  E-value=1.8e-12  Score=77.73  Aligned_cols=99  Identities=29%  Similarity=0.483  Sum_probs=76.2

Q ss_pred             eEeecCcceEEEEEEC--Cc--eEEEEEecC---HHHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           7 IVGQGAFGVVWKGLWQ--NQ--YVAVKHIET---EAERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~--~~--~~~~k~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      .||+|+||.||++...  +.  .+++|.+..   ......+.+|+.++..+ +|||++++.+.+. .+..+++|||+++|
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            5899999999999875  32  457776652   23445677899999888 7999999999884 47789999999999


Q ss_pred             ChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++...+                .++.+....++.|++.|+
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al  125 (270)
T cd05047          82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM  125 (270)
T ss_pred             cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHH
Confidence            9999997643                244556677777777654

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.44  E-value=2e-12  Score=77.92  Aligned_cols=104  Identities=31%  Similarity=0.458  Sum_probs=80.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecC--HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~   71 (106)
                      |...+.||+|+||.||.+...       +..+++|.+..  ......+.+|+.++..++|+|++++.+.+. .+..++++
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   86 (280)
T cd05092           7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVF   86 (280)
T ss_pred             ceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEE
Confidence            456788999999999988632       34677777653  233457888999999999999999998884 46789999


Q ss_pred             eecCCCChHHHHhcCC---------------CCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSS---------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~---------------~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++++|.+++....               .++......++.|++.|+
T Consensus        87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al  135 (280)
T cd05092          87 EYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGM  135 (280)
T ss_pred             ecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHH
Confidence            9999999999997643               245566677778887765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.44  E-value=2.1e-12  Score=77.96  Aligned_cols=99  Identities=22%  Similarity=0.290  Sum_probs=75.6

Q ss_pred             eEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHH---HhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           7 IVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQ---LSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      .||+|+||.||.+...  +..+++|.+...     .......++..+   +....|++++.+.+.+. .+..+++|||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            3799999999998875  678999987532     111223333332   33347899999988884 578999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.+++..++.+++..+..++.|++.|+
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al  110 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGL  110 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999998877788888899999988765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.44  E-value=5.5e-13  Score=78.88  Aligned_cols=98  Identities=32%  Similarity=0.418  Sum_probs=82.1

Q ss_pred             EeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCCh
Q psy9377           8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         8 lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l   79 (106)
                      ||+|++|.+|.+...  +..+++|.++...     ....+..|+.+++.++|+|++++.+.+ ..+..+++||++.+++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            589999999999876  6788999875332     334677888999999999999999888 45779999999999999


Q ss_pred             HHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++.....++......++.|++.|+
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l  106 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLAL  106 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99998876778888888888888765

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.44  E-value=6.9e-13  Score=81.95  Aligned_cols=103  Identities=24%  Similarity=0.354  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec------CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG------NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~l   69 (106)
                      |.+.+.||+|++|.||.+.+.  +..+++|.+...    .......+|+.++..++|+|++++.+.+..      ...++
T Consensus         7 y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l   86 (337)
T cd07858           7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYI   86 (337)
T ss_pred             eeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEE
Confidence            678899999999999999876  788999987532    223456678999999999999999987732      35899


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+. ++|.+++.....+++..+..++.|++.|+
T Consensus        87 v~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL  121 (337)
T cd07858          87 VYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGL  121 (337)
T ss_pred             EEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            999995 68999998877788999999999998775

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.44  E-value=4.2e-13  Score=81.45  Aligned_cols=103  Identities=23%  Similarity=0.344  Sum_probs=83.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |.....||+|++|.||.+...  +..+++|.+...  .....+.+|+..+..++|+|++++.+.+ ..+..++++||+++
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~  103 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG  103 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence            344567999999999998765  678999987532  2345677899999999999999999888 45789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++... .++.+....++.|++.++
T Consensus       104 ~~L~~~~~~~-~l~~~~~~~~~~qi~~~l  131 (292)
T cd06658         104 GALTDIVTHT-RMNEEQIATVCLSVLRAL  131 (292)
T ss_pred             CcHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence            9999988654 467788888888888765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0607|consensus

Probab=99.44  E-value=3.2e-14  Score=86.33  Aligned_cols=100  Identities=23%  Similarity=0.276  Sum_probs=87.0

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEeecCCCCh
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVMEYAEGGSL   79 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l   79 (106)
                      +.||+|+++.|-.|..-  +..+++|++.+.  ..+..+.+|+.++... .|+||+.+.++|. ....|+|||-+.||+|
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl  163 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL  163 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence            57999999999988654  889999999743  4577889999988776 6999999999994 5678999999999999


Q ss_pred             HHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ...|+++..+.+.++..+++.+.+||
T Consensus       164 LshI~~~~~F~E~EAs~vvkdia~aL  189 (463)
T KOG0607|consen  164 LSHIQKRKHFNEREASRVVKDIASAL  189 (463)
T ss_pred             HHHHHHhhhccHHHHHHHHHHHHHHH
Confidence            99999999999999999999888775

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.43  E-value=4.5e-13  Score=82.63  Aligned_cols=103  Identities=21%  Similarity=0.277  Sum_probs=84.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-----cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-----GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~lv   70 (106)
                      |++.+.||+|++|.||.+...  +..+++|.+...    .....+.+|+.++..++|+|++++.+.+.     ....+++
T Consensus         7 y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv   86 (334)
T cd07855           7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVV   86 (334)
T ss_pred             eeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEE
Confidence            677889999999999999876  788999987532    22345677899999999999999988772     2568999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +||+. +++.+++...+.+++..+..++.|++.|+
T Consensus        87 ~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL  120 (334)
T cd07855          87 MDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGL  120 (334)
T ss_pred             Eehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            99995 58999998777788888999999988775

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0666|consensus

Probab=99.43  E-value=2.4e-14  Score=86.58  Aligned_cols=103  Identities=22%  Similarity=0.368  Sum_probs=83.1

Q ss_pred             CCCceeEeecCcceEEEEEEC------CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-e-cCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ------NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-T-GNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~l   69 (106)
                      |+.+..||+|++|.||++...      ...+++|.++.+    ....+..+|+.+++.++|+|++.+..++ . +..+++
T Consensus        26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l  105 (438)
T KOG0666|consen   26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWL  105 (438)
T ss_pred             hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEE
Confidence            677889999999999999543      236788877644    4457788999999999999999999988 3 578999


Q ss_pred             EEeecCCCChHHHHhcCC-----CCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSS-----AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~-----~~~~~~~~~~~~qll~~~  105 (106)
                      ++||.++ +|.+.|+.+.     -++...++.++-||++++
T Consensus       106 ~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv  145 (438)
T KOG0666|consen  106 LFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGV  145 (438)
T ss_pred             Eehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhh
Confidence            9999988 9999997543     255566778888888875

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.43  E-value=3.4e-12  Score=75.65  Aligned_cols=100  Identities=34%  Similarity=0.513  Sum_probs=80.1

Q ss_pred             eeEeecCcceEEEEEEC-CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCChH
Q psy9377           6 KIVGQGAFGVVWKGLWQ-NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLY   80 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l~   80 (106)
                      +.||+|++|.||.+.+. +..+++|.+...   .....+.+|+.++..++|+|++++.+.+ .....++++|++.+++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            36899999999999876 788999987532   2345688899999999999999999988 457799999999999999


Q ss_pred             HHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          81 NELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        81 ~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +++... ...+......++.|++.|+
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~l  106 (251)
T cd05041          81 TFLRKKKNRLTVKKLLQMSLDAAAGM  106 (251)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            999764 3456666677777776554

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.43  E-value=5.6e-13  Score=81.07  Aligned_cols=101  Identities=21%  Similarity=0.324  Sum_probs=82.0

Q ss_pred             CceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      ....||+|+||.||.+...  +..+++|.+...  .....+.+|+..+..+.|||++++.+.+ ..+..++++||+++++
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~  104 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA  104 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence            3457899999999999775  788999987532  2345677888899999999999999888 4578999999999999


Q ss_pred             hHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++.. ..+++.....++.|++.|+
T Consensus       105 L~~~~~~-~~~~~~~~~~~~~qi~~~L  130 (297)
T cd06659         105 LTDIVSQ-TRLNEEQIATVCESVLQAL  130 (297)
T ss_pred             HHHHHhh-cCCCHHHHHHHHHHHHHHH
Confidence            9987765 3467888888888888765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.43  E-value=2.9e-12  Score=76.71  Aligned_cols=104  Identities=25%  Similarity=0.396  Sum_probs=79.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--C--ceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec-------Cc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N--QYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~--~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~   66 (106)
                      +.+.+.||+|+||.||++...  +  ..+++|.++.    ....+.+.+|..++..++|+|++++.+.+..       ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            456789999999999999876  2  2578887642    2335567889999999999999999987621       34


Q ss_pred             eEEEEeecCCCChHHHHhcC------CCCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQRS------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~~------~~~~~~~~~~~~~qll~~~  105 (106)
                      .++++||+.+|+|.+++...      ..++.+....++.|++.|+
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  125 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGM  125 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHH
Confidence            78999999999999887431      2356677778888887765

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.43  E-value=1.5e-12  Score=78.55  Aligned_cols=103  Identities=26%  Similarity=0.385  Sum_probs=78.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhc---CCCCceeeeeeeEe------cCc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSR---VSHPNIVKLYGACT------GNP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~------~~~   66 (106)
                      |.+.+.||+|++|.||.+.+.  +..+++|.++..    .......+|+..+..   ++|+|++++.+.+.      ...
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            788899999999999999876  678999987532    112234456655554   47999999998873      134


Q ss_pred             eEEEEeecCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .++++|++.+ ++.+++....  .++++.++.++.|++.|+
T Consensus        82 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al  121 (288)
T cd07863          82 VTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGL  121 (288)
T ss_pred             EEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            7999999975 8988887643  477888899999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG1290|consensus

Probab=99.43  E-value=5.2e-13  Score=84.56  Aligned_cols=103  Identities=24%  Similarity=0.370  Sum_probs=85.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHH-HHHHHHHHHHHhcCC-----C---CceeeeeeeE-----ecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE-RKAFAVEVRQLSRVS-----H---PNIVKLYGAC-----TGN   65 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~-----~---~~i~~~~~~~-----~~~   65 (106)
                      |-+.++||.|.|++||.+.+.  ...||+|+.++... .+...-|+.++++++     +   ..++++.+.|     ++.
T Consensus        80 Y~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~  159 (590)
T KOG1290|consen   80 YHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQ  159 (590)
T ss_pred             EEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCc
Confidence            667889999999999999987  67899999876543 566788999988763     2   3589999988     246


Q ss_pred             ceEEEEeecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          66 PVCLVMEYAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        66 ~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|+|++ |.+|..+|.+.  +.++...++.+++|+|.+|
T Consensus       160 HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GL  200 (590)
T KOG1290|consen  160 HVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGL  200 (590)
T ss_pred             EEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHH
Confidence            899999999 66999999864  4788999999999999886

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.43  E-value=1.3e-12  Score=79.70  Aligned_cols=103  Identities=20%  Similarity=0.297  Sum_probs=81.7

Q ss_pred             CCCceeEeecCcceEEEEEEC----CceEEEEEecC-----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-c--CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ----NQYVAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVKLYGACT-G--NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~----~~~~~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--~~~~l   69 (106)
                      |...+.||+|++|.||.+...    +..+++|.+..     ........+|+.++..++|||++++.+.+. .  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            778899999999999999874    47899998864     223456678899999999999999999983 3  56999


Q ss_pred             EEeecCCCChHHHHhcC-----CCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRS-----SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~-----~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|++++ ++.+++...     ..+++..+..++.|++.|+
T Consensus        82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  121 (316)
T cd07842          82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGV  121 (316)
T ss_pred             EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHH
Confidence            9999975 777776532     2466777888888888775

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.42  E-value=1.3e-12  Score=79.30  Aligned_cols=103  Identities=23%  Similarity=0.323  Sum_probs=82.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-----------
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-----------   64 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------   64 (106)
                      |++.+.+|+|++|.||++...  +..+++|.++..    .......+|+.++..++|||++++.+.+..           
T Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~   88 (302)
T cd07864           9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDK   88 (302)
T ss_pred             hheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccC
Confidence            678899999999999999886  678899988532    123456678899999999999999988732           


Q ss_pred             CceEEEEeecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          65 NPVCLVMEYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        65 ~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ...++++||+++ ++...+... ..++.+.+..++.|++.||
T Consensus        89 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL  129 (302)
T cd07864          89 GAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGL  129 (302)
T ss_pred             CcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            268999999976 777777654 3577888889999988765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.42  E-value=1.1e-12  Score=81.19  Aligned_cols=102  Identities=25%  Similarity=0.294  Sum_probs=82.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|+|++++.+.+..       ...+
T Consensus        17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   96 (343)
T cd07878          17 YQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVY   96 (343)
T ss_pred             hhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEE
Confidence            778899999999999999876  678999988632    123456789999999999999999887721       3478


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++++ +++|.+++.. +.+++..+..++.|++.||
T Consensus        97 ~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL  131 (343)
T cd07878          97 LVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGL  131 (343)
T ss_pred             EEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence            999988 7799888764 4588888999999998876

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.42  E-value=3e-12  Score=79.34  Aligned_cols=102  Identities=25%  Similarity=0.274  Sum_probs=82.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |+..+.||+|++|.||.+...  +..+++|.+...    .....+.+|+.++..++|+|++++.+.+..       ...+
T Consensus        17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   96 (343)
T cd07880          17 YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFY   96 (343)
T ss_pred             eEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEE
Confidence            677889999999999999766  788999987532    224467789999999999999999988832       2358


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++++ ++++.+++.. ..+++..++.++.|++.|+
T Consensus        97 lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al  131 (343)
T cd07880          97 LVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGL  131 (343)
T ss_pred             EEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence            999998 7799888765 4578888889999998765

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.41  E-value=3.7e-12  Score=77.01  Aligned_cols=103  Identities=24%  Similarity=0.365  Sum_probs=77.7

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEEecCH----HHHHHHHHHHHHHhc---CCCCceeeeeeeEe------cC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKHIETE----AERKAFAVEVRQLSR---VSHPNIVKLYGACT------GN   65 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~----~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~------~~   65 (106)
                      |.+.+.||+|+||.||++.+.   +..+++|.++..    .......+|+..+..   +.|||++++.+.+.      ..
T Consensus         3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~   82 (290)
T cd07862           3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   82 (290)
T ss_pred             cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCC
Confidence            788999999999999999874   567889977522    122344556665554   46999999999873      24


Q ss_pred             ceEEEEeecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          66 PVCLVMEYAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        66 ~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      ..++++|++. ++|.+++...  ..+++..+..++.|++.||
T Consensus        83 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL  123 (290)
T cd07862          83 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGL  123 (290)
T ss_pred             cEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            5899999996 5899998753  2467778888899988775

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.41  E-value=1.2e-12  Score=78.78  Aligned_cols=103  Identities=26%  Similarity=0.386  Sum_probs=82.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---HHHHHHHHHHHHhcCC-CCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---ERKAFAVEVRQLSRVS-HPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |.+.+.||+|++|.||.+...  +..+++|.+....   ......+|+..+..++ |+|++++.+.+ ..+..+++||++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            678899999999999999876  6778999875321   1223446788888888 99999999988 557899999999


Q ss_pred             CCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                       +|++.+++....  .++...+..++.|++.++
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l  112 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGL  112 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHH
Confidence             779999988754  567788888888888765

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.41  E-value=1.9e-12  Score=79.06  Aligned_cols=103  Identities=25%  Similarity=0.371  Sum_probs=82.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----HHHHHHHHHHHHhcCCCCceeeeeeeEec---CceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGACTG---NPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~lv~e   72 (106)
                      |+..+.||+|++|.||++.+.  +..+++|.++...    ......+|+.++..++|+|++++.+.+..   +..++++|
T Consensus         9 y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   88 (309)
T cd07845           9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVME   88 (309)
T ss_pred             eeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEe
Confidence            677889999999999999876  7889999875221    12345678999999999999999998832   45899999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+.+ +|.+++... ..+++.....++.|++.|+
T Consensus        89 ~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l  121 (309)
T cd07845          89 YCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGL  121 (309)
T ss_pred             cCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            9965 888888763 5677888888999988765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.41  E-value=4.7e-12  Score=77.64  Aligned_cols=103  Identities=24%  Similarity=0.307  Sum_probs=81.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+..+.||+|+||.+|++...  +..+++|.+...     .....+.+|+..+..++|+|++++.+.+ ..+..++++||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            567788999999999999875  678899987521     2334677899999999999999999988 45778999999


Q ss_pred             cCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+ ++.+.+.. ..+++...+..++.|++.|+
T Consensus       107 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l  138 (317)
T cd06635         107 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGL  138 (317)
T ss_pred             CCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            975 77777754 44567777777888887664

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.41  E-value=4.4e-12  Score=76.47  Aligned_cols=99  Identities=20%  Similarity=0.244  Sum_probs=75.3

Q ss_pred             eEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHH---HHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           7 IVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEV---RQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~---~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      .||+|+||.||.+...  +..+++|.+....     .......+.   ..+....|++++.+.+.+. .+..++++||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            3799999999998765  6789999875321     111122232   3344457899999988884 477999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+|.+++...+.+++..+..++.|++.|+
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l  110 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGL  110 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999998777788888899999988765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.41  E-value=4.5e-12  Score=75.87  Aligned_cols=104  Identities=22%  Similarity=0.304  Sum_probs=79.1

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEEecCH------------HHHHHHHHHHHHHhc-CCCCceeeeeeeE-ec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKHIETE------------AERKAFAVEVRQLSR-VSHPNIVKLYGAC-TG   64 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~------------~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~   64 (106)
                      |++.+.||+|++|.||.+...   +..+++|.+...            .....+..|+.++.. ++|+|++++.+.+ ..
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            778899999999999999875   467888876411            123445667776654 7899999999988 45


Q ss_pred             CceEEEEeecCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          65 NPVCLVMEYAEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        65 ~~~~lv~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      +..++++||+++++|.+++..    ...+++.....++.|++.++
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  126 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLAL  126 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            789999999999999988743    23466777777777777654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.41  E-value=3e-12  Score=78.95  Aligned_cols=102  Identities=26%  Similarity=0.280  Sum_probs=81.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe--cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT--GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~lv~e~   73 (106)
                      |+..+.||+|.||.||++...  +..+++|.+...    .....+..|+.++..++|||++++.+.+.  ....++++|+
T Consensus        12 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~   91 (328)
T cd07856          12 YVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTEL   91 (328)
T ss_pred             eEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeeh
Confidence            677899999999999999876  778999977421    23456778999999999999999999883  3568999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      + +++|.++++.. .++...+..++.|++.|+
T Consensus        92 ~-~~~L~~~~~~~-~~~~~~~~~~~~ql~~aL  121 (328)
T cd07856          92 L-GTDLHRLLTSR-PLEKQFIQYFLYQILRGL  121 (328)
T ss_pred             h-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence            8 56898888653 466777778888887765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.41  E-value=3e-12  Score=79.83  Aligned_cols=101  Identities=24%  Similarity=0.261  Sum_probs=80.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.+++.++|+|++++.+.+..       ..++
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~  105 (364)
T cd07875          26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY  105 (364)
T ss_pred             eeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEE
Confidence            677889999999999999876  778999988532    234567789999999999999999988732       3479


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+.+ ++.+++..  .++......++.|++.||
T Consensus       106 lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL  139 (364)
T cd07875         106 IVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGI  139 (364)
T ss_pred             EEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHH
Confidence            99999965 77777764  356677778888888765

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.41  E-value=1.3e-12  Score=81.32  Aligned_cols=99  Identities=19%  Similarity=0.249  Sum_probs=80.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.....    ....|+.++..++|+|++++++.+ ..+..++++|++. ++
T Consensus        68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~  142 (357)
T PHA03209         68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SD  142 (357)
T ss_pred             cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-Cc
Confidence            678899999999999999886  567888865422    234578889999999999999988 4577899999995 58


Q ss_pred             hHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++.. ...++...+..++.|++.||
T Consensus       143 l~~~l~~~~~~~~~~~~~~i~~qi~~aL  170 (357)
T PHA03209        143 LYTYLTKRSRPLPIDQALIIEKQILEGL  170 (357)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            8888865 34678888889999998875

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.41  E-value=8.4e-13  Score=78.64  Aligned_cols=105  Identities=22%  Similarity=0.286  Sum_probs=79.2

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecC-------HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEE
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-------EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      .|.+.+.||+|++|.||.+.+.  +....++....       .........|..++..++|||++++.+.+ .....+++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            3788899999999999998765  33344443321       11233455678888999999999999888 45778999


Q ss_pred             EeecCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      +||+++++|.+++..    ...+++..+..++.|++.|+
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  119 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGV  119 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHH
Confidence            999999999988863    23577788888888887765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.40  E-value=2.7e-12  Score=78.10  Aligned_cols=103  Identities=26%  Similarity=0.352  Sum_probs=81.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec---------Cc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG---------NP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~   66 (106)
                      |+..+.||+|++|.||.+...  +..+++|.+...    .......+|+.++..++|||++++.+.+..         ..
T Consensus        14 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   93 (310)
T cd07865          14 YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGS   93 (310)
T ss_pred             eEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCce
Confidence            677889999999999999876  778999977422    122345678899999999999999988732         23


Q ss_pred             eEEEEeecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      .++++||+.+ ++.+++.... .++++.+..++.|++.|+
T Consensus        94 ~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al  132 (310)
T cd07865          94 FYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGL  132 (310)
T ss_pred             EEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            6999999965 8888887643 578888889999998775

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.40  E-value=5.8e-12  Score=77.15  Aligned_cols=103  Identities=25%  Similarity=0.319  Sum_probs=80.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |...+.+|+|++|.||.+...  +..+++|.+...     .....+.+|+..+..++|+|++++.+.+ .....++++||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            455678999999999999875  778899987521     2234677899999999999999999988 45778999999


Q ss_pred             cCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+ ++.+++.. ..+++...+..++.|++.|+
T Consensus       103 ~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al  134 (313)
T cd06633         103 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGL  134 (313)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            964 77777765 34567777777888887664

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.40  E-value=2.4e-12  Score=79.99  Aligned_cols=101  Identities=25%  Similarity=0.273  Sum_probs=79.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.+++.++|+|++++.+.+..       ...+
T Consensus        19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~   98 (355)
T cd07874          19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVY   98 (355)
T ss_pred             eeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeE
Confidence            677899999999999999876  778999988532    234567788999999999999999998732       3479


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+.+ ++.+.+..  .++...+..++.|++.||
T Consensus        99 lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL  132 (355)
T cd07874          99 LVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGI  132 (355)
T ss_pred             EEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHH
Confidence            99999976 67777754  366777778888888765

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.40  E-value=3.4e-12  Score=76.74  Aligned_cols=103  Identities=26%  Similarity=0.356  Sum_probs=80.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCC-CCceeeeeeeE-ec--CceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVS-HPNIVKLYGAC-TG--NPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~--~~~~lv~e   72 (106)
                      |++.+.+|+|++|.||++...  +..+++|.++..   .......+|+..+..+. |+|++++.+.+ ..  +..++++|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            678899999999999999875  678899987532   12223446777777774 99999999988 33  67899999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+.+ ++.+.+... ..+++..+..++.|++.|+
T Consensus        81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L  113 (282)
T cd07831          81 LMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSL  113 (282)
T ss_pred             cCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            9975 888888763 4577888888888888765

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.40  E-value=4.7e-12  Score=75.45  Aligned_cols=100  Identities=25%  Similarity=0.379  Sum_probs=76.0

Q ss_pred             eeEeecCcceEEEEEEC-----CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe--cCceEEEEeecC
Q psy9377           6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT--GNPVCLVMEYAE   75 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~lv~e~~~   75 (106)
                      +.||+|+||.||++...     ...+++|.+..   ......+.+|+.++..++|||++++.+.+.  .+..++++||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            36899999999998753     24688887742   223456778888999999999999999773  356889999999


Q ss_pred             CCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.+++.... ..+......++.|++.|+
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l  111 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGM  111 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            999999997643 344555566777877665

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.39  E-value=1.2e-12  Score=80.43  Aligned_cols=104  Identities=24%  Similarity=0.303  Sum_probs=86.4

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec------CceE
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG------NPVC   68 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~   68 (106)
                      .|.+.+.||+|++|.||++...  +..+++|.+...    ...+.+.+|+..++.++|+|++++.+.+..      ...+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            3788899999999999999876  688999987532    234568889999999999999999988833      3689


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|+.+ ++.+++.....+++..+..++.|++.|+
T Consensus        81 lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l  116 (330)
T cd07834          81 IVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGL  116 (330)
T ss_pred             EEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            99999974 8999998777788888888999988775

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.39  E-value=6.6e-12  Score=75.59  Aligned_cols=103  Identities=24%  Similarity=0.270  Sum_probs=78.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHH-HhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQ-LSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~-~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |++.+.||+|+||.||++.+.  +..+++|.++..   .....+..|... ++...|+|++++.+.+ ..+..++++||+
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~   82 (283)
T cd06617           3 LEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVM   82 (283)
T ss_pred             ceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhh
Confidence            678889999999999999876  788999987532   223344455554 5567899999999988 457799999999


Q ss_pred             CCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      + |+|.+++..    ...+++..+..++.|++.|+
T Consensus        83 ~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l  116 (283)
T cd06617          83 D-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKAL  116 (283)
T ss_pred             c-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHH
Confidence            6 588887764    23567778888888887765

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.38  E-value=4.3e-12  Score=76.85  Aligned_cols=103  Identities=21%  Similarity=0.259  Sum_probs=80.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----HHHHHHHHHHHHhcCC-CCceeeeeeeEec-Cc-----eE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----ERKAFAVEVRQLSRVS-HPNIVKLYGACTG-NP-----VC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~-~~-----~~   68 (106)
                      |+..+.||+|.+|.||++.+.  +..+++|.++...    ....+.+|+.++..+. |+|++++.+.+.. +.     .+
T Consensus         3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~   82 (295)
T cd07837           3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY   82 (295)
T ss_pred             ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence            778899999999999999876  6789999875321    2345778999999885 6999999988732 22     79


Q ss_pred             EEEeecCCCChHHHHhcC-----CCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRS-----SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~-----~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+++ ++.+++...     ..+++..+..++.|++.||
T Consensus        83 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L  123 (295)
T cd07837          83 LVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGV  123 (295)
T ss_pred             EEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHH
Confidence            99999986 888888643     2357788888888888765

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0608|consensus

Probab=99.38  E-value=4.8e-13  Score=87.45  Aligned_cols=105  Identities=22%  Similarity=0.287  Sum_probs=85.8

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHHH-----HHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE-----RKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      +|-.++.||-|+||.|..+...  ...+++|.+++.+.     ...+..|..++...++.++++++-.| +.+.+|+|||
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd  709 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD  709 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence            3556789999999999877544  45678887764432     23466788899999999999998888 5588999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+||++..+|.+-+.++++.|++|+..+--|+
T Consensus       710 YIPGGDmMSLLIrmgIFeE~LARFYIAEltcAi  742 (1034)
T KOG0608|consen  710 YIPGGDMMSLLIRMGIFEEDLARFYIAELTCAI  742 (1034)
T ss_pred             ccCCccHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999998775543

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.38  E-value=4e-12  Score=76.61  Aligned_cols=104  Identities=27%  Similarity=0.335  Sum_probs=79.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++...       +..+++|.++..   .....+.+|..++..++|+|++++.+.+. ....+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~   86 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI   86 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence            456678999999999998753       357899988632   23456778888999999999999999884 4778999


Q ss_pred             EeecCCCChHHHHhcC----------------CCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS----------------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~qll~~~  105 (106)
                      +||+.+++|.+++...                ..++......++.|++.|+
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL  137 (283)
T cd05091          87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGM  137 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHH
Confidence            9999999999998532                1244455566777877665

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.37  E-value=4.9e-12  Score=76.02  Aligned_cols=103  Identities=26%  Similarity=0.417  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |++.+.||+|++|.+|++...  +..+++|.++..    .....+.+|+..++.++|++++++.+.+ .++..++++||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            678899999999999999875  778899987532    2245677888999999999999999988 457899999999


Q ss_pred             CCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ++ ++.+++... ..++...+..++.|++.|+
T Consensus        81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l  111 (283)
T cd05118          81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGL  111 (283)
T ss_pred             CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence            76 888888764 4677888888999988765

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.37  E-value=7.6e-12  Score=77.76  Aligned_cols=101  Identities=26%  Similarity=0.265  Sum_probs=81.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |+..+.||+|++|.||.+.+.  +..+++|.+..    ......+.+|+.++..++|+|++++.+.+..       ...+
T Consensus        18 y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   97 (353)
T cd07850          18 YQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVY   97 (353)
T ss_pred             eEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEE
Confidence            777899999999999999876  78899998753    2234456789999999999999999988732       3579


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++||+.+ ++.+.+...  ++...+..++.|++.|+
T Consensus        98 lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL  131 (353)
T cd07850          98 LVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGI  131 (353)
T ss_pred             EEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHH
Confidence            99999965 888888654  67777788888888765

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.37  E-value=3e-12  Score=82.24  Aligned_cols=99  Identities=24%  Similarity=0.275  Sum_probs=80.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|...    .....+|+.++..++|+|++++++.+ ..+..+++++++. ++
T Consensus       171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~  245 (461)
T PHA03211        171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SD  245 (461)
T ss_pred             eEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CC
Confidence            567789999999999999886  6778888542    22356789999999999999999988 4577899999995 58


Q ss_pred             hHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++... ..++...+..++.|++.||
T Consensus       246 L~~~l~~~~~~l~~~~~~~i~~qi~~aL  273 (461)
T PHA03211        246 LYTYLGARLRPLGLAQVTAVARQLLSAI  273 (461)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            88888754 4577888889999998775

>KOG3653|consensus

Probab=99.37  E-value=5.2e-13  Score=84.15  Aligned_cols=98  Identities=32%  Similarity=0.411  Sum_probs=75.5

Q ss_pred             CceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHh--cCCCCceeeeeeeE---e--cCceEEEEeecCC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLS--RVSHPNIVKLYGAC---T--GNPVCLVMEYAEG   76 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~---~--~~~~~lv~e~~~~   76 (106)
                      ....+|+|.||.||+++..++.||+|+++ ....+.+++|-.+..  .++|+||+++.+.-   +  ...+++|++|.+.
T Consensus       214 l~eli~~Grfg~V~KaqL~~~~VAVKifp-~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~k  292 (534)
T KOG3653|consen  214 LLELIGRGRFGCVWKAQLDNRLVAVKIFP-EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPK  292 (534)
T ss_pred             hHHHhhcCccceeehhhccCceeEEEecC-HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccC
Confidence            34678999999999999999999999985 445667777777655  47899999987655   1  2469999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhcccc
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFS  103 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~  103 (106)
                      |+|.+||+.+. .+......++..+..
T Consensus       293 GsL~dyL~~nt-isw~~~cria~Smar  318 (534)
T KOG3653|consen  293 GSLCDYLKANT-ISWNSLCRIAESMAR  318 (534)
T ss_pred             CcHHHHHHhcc-ccHHHHHHHHHHHHH
Confidence            99999999876 344444455444433

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.37  E-value=2.5e-12  Score=79.63  Aligned_cols=102  Identities=27%  Similarity=0.375  Sum_probs=82.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEec-------------
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACTG-------------   64 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------   64 (106)
                      |...+.||.|++|.||.+...  +..+++|.+...  .....+.+|+.+++.++|+|++++.+.+..             
T Consensus         7 y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~   86 (342)
T cd07854           7 YMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLT   86 (342)
T ss_pred             eEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccccc
Confidence            677899999999999999876  678999987532  234567789999999999999999876622             


Q ss_pred             --CceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          65 --NPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        65 --~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                        ...++++||+. ++|.+++... .+++..++.++.|++.|+
T Consensus        87 ~~~~~~lv~e~~~-~~L~~~~~~~-~l~~~~~~~~~~qi~~aL  127 (342)
T cd07854          87 ELNSVYIVQEYME-TDLANVLEQG-PLSEEHARLFMYQLLRGL  127 (342)
T ss_pred             ccceEEEEeeccc-ccHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence              24789999997 4898888653 477888899999998876

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.36  E-value=3.7e-12  Score=76.15  Aligned_cols=100  Identities=35%  Similarity=0.511  Sum_probs=74.9

Q ss_pred             eeEeecCcceEEEEEECC--------ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           6 KIVGQGAFGVVWKGLWQN--------QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~~--------~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      +.||+|++|.||.+....        ..+++|.+...   .....+.+|+.++..++|+|++++.+.+ .....++++|+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            358999999999987641        45777766422   2345677899999999999999999988 45779999999


Q ss_pred             cCCCChHHHHhcCC-------CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS-------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~-------~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++.+..       .++......++.|++.|+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  119 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGC  119 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHH
Confidence            99999999997532       234455556666766553

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.35  E-value=8e-12  Score=77.19  Aligned_cols=102  Identities=24%  Similarity=0.307  Sum_probs=81.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEec------CceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTG------NPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~lv   70 (106)
                      |++.+.||+|++|.||.+.+.  +..+++|.++..   .....+..|+.++..++|+|++++.+.+..      ...+++
T Consensus         7 y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv   86 (336)
T cd07849           7 YQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIV   86 (336)
T ss_pred             eEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEE
Confidence            678899999999999999876  788999987532   234456789999999999999999987632      357999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|++.+ ++...+.. +.+++..+..++.|++.||
T Consensus        87 ~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL  119 (336)
T cd07849          87 QELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGL  119 (336)
T ss_pred             ehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence            999965 88877764 3578888888998888765

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG1152|consensus

Probab=99.35  E-value=1.7e-12  Score=83.88  Aligned_cols=104  Identities=22%  Similarity=0.238  Sum_probs=85.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHH----------HHHHHHHHHHHhcCC---CCceeeeeeeE-ecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE----------RKAFAVEVRQLSRVS---HPNIVKLYGAC-TGN   65 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~----------~~~~~~~~~~~~~~~---~~~i~~~~~~~-~~~   65 (106)
                      |+.++.+|+|+||.|+.|.++  ...|++|.|.++..          ...+-.|+.+|..+.   |+||+++.+.| +++
T Consensus       563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd  642 (772)
T KOG1152|consen  563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD  642 (772)
T ss_pred             ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC
Confidence            778899999999999999887  57888998864321          123445888888775   99999999999 568


Q ss_pred             ceEEEEeec-CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          66 PVCLVMEYA-EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        66 ~~~lv~e~~-~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|++||-. +|-+|++++..+..+.+.+++.+.+|+.-++
T Consensus       643 ~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi  683 (772)
T KOG1152|consen  643 YYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGI  683 (772)
T ss_pred             eeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcc
Confidence            889999864 4569999999999999999999999987765

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.35  E-value=3.7e-12  Score=77.79  Aligned_cols=102  Identities=19%  Similarity=0.110  Sum_probs=77.9

Q ss_pred             CceeEeecCcceEEEEEECCceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQNQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      +.+.+|.|+++.++++...+..+++|.++..    .....+..|+..+..++|+|++++.+.+ ..+..++++||+++|+
T Consensus         6 i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~   85 (314)
T cd08216           6 IGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS   85 (314)
T ss_pred             hhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence            3344455555555555445889999987532    3345688899999999999999999988 4577999999999999


Q ss_pred             hHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++...  ..+++.....++.|++.||
T Consensus        86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L  114 (314)
T cd08216          86 CEDLLKTHFPEGLPELAIAFILKDVLNAL  114 (314)
T ss_pred             HHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            99999863  3467778888889988775

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG1025|consensus

Probab=99.35  E-value=3.3e-13  Score=90.02  Aligned_cols=102  Identities=24%  Similarity=0.385  Sum_probs=84.1

Q ss_pred             CceeEeecCcceEEEEEEC------CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeec
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ------NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYA   74 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~   74 (106)
                      ..++||+|+||+||++.+-      ..+|++|.+..   .....+++.|...|.+++|||++++.+++....+.+|++|+
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~m  779 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLM  779 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhc
Confidence            4578999999999999764      34678887753   23456788999999999999999999999777799999999


Q ss_pred             CCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.|.++++.++ ++..+....|..||..++
T Consensus       780 P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM  811 (1177)
T KOG1025|consen  780 PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGM  811 (1177)
T ss_pred             ccchHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence            9999999999754 677777778888887654

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.34  E-value=2.5e-12  Score=77.30  Aligned_cols=103  Identities=27%  Similarity=0.373  Sum_probs=84.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|.+|.+|.+...  +..+++|.+...    .....+..|+..+..++|+|++++.+.+ ..+..++++|++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            567788999999999999876  688999987632    2235567788999999999999999888 457899999999


Q ss_pred             CCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      . ++|.+++... ..++......++.|++.|+
T Consensus        81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l  111 (282)
T cd07829          81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGL  111 (282)
T ss_pred             C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence            7 4899999876 4678888888888888765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.34  E-value=5.4e-12  Score=77.92  Aligned_cols=102  Identities=25%  Similarity=0.377  Sum_probs=79.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcC-CCCceeeeeeeEe---cCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRV-SHPNIVKLYGACT---GNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~---~~~~~lv~   71 (106)
                      |++.+.||+|++|.+|++.+.  +..+++|.+..    ......+.+|+.++..+ +|+|++++.+.+.   ....++++
T Consensus         9 y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~   88 (337)
T cd07852           9 YEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVF   88 (337)
T ss_pred             HHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEe
Confidence            667789999999999999876  67888887642    12334566789999999 9999999999873   24589999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+.+ +|.+++... .+.......++.|++.||
T Consensus        89 e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L  120 (337)
T cd07852          89 EYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKAL  120 (337)
T ss_pred             ccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence            99974 999988765 566666677788877664

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.34  E-value=2.6e-11  Score=70.51  Aligned_cols=104  Identities=38%  Similarity=0.631  Sum_probs=84.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      |...+.+|+|+++.+|++...  +..+++|.+....   ....+.+|+..+..++|++++++.+.+. ....++++|++.
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            567889999999999999876  5789999886432   4567778899999999999999998884 477899999999


Q ss_pred             CCChHHHHhcCCC-CchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSA-ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~-~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++..... ++......++.+++.++
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l  111 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEAL  111 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            9999999987654 66777777777776653

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.34  E-value=1.6e-11  Score=75.02  Aligned_cols=103  Identities=23%  Similarity=0.304  Sum_probs=80.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+..+.+|+|++|.||.+...  +..+++|.+..     ......+.+|+.++..++|+|++++.+.+ .....++++||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            556778999999999999876  67788887742     12334677899999999999999999988 45778999999


Q ss_pred             cCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +. |++.+++.. ...++...+..++.|++.|+
T Consensus        97 ~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l  128 (308)
T cd06634          97 CL-GSASDLLEVHKKPLQEVEIAAVTHGALQGL  128 (308)
T ss_pred             cC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            96 578777754 44567777778888887654

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.33  E-value=3.1e-11  Score=72.35  Aligned_cols=104  Identities=23%  Similarity=0.323  Sum_probs=78.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec----C---
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG----N---   65 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~---   65 (106)
                      |.+.+.||+|++|.||++.+.     +..+++|.+..    ......+.+|+.++..++|||++++.+.+..    +   
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            667889999999999998753     46789998753    2234567789999999999999999997721    1   


Q ss_pred             ceEEEEeecCCCChHHHHhcC------CCCchhhhhhhhhccccCC
Q psy9377          66 PVCLVMEYAEGGSLYNELQRS------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        66 ~~~lv~e~~~~g~l~~~l~~~------~~~~~~~~~~~~~qll~~~  105 (106)
                      ..+++++|+.+|++.+++...      ..++......++.|++.|+
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l  126 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM  126 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Confidence            247889999999998887532      1345666677888877654

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.31  E-value=1.3e-11  Score=72.91  Aligned_cols=92  Identities=21%  Similarity=0.235  Sum_probs=72.8

Q ss_pred             cCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCChHHHHhcCC
Q psy9377          11 GAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSS   87 (106)
Q Consensus        11 g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l~~~l~~~~   87 (106)
                      |.++.||.+.+.  +..+++|.++....   ...+...+....|||++++.+.+ ..+..+++|||+++|+|.+++....
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~   80 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE---YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL   80 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh---hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhc
Confidence            779999999876  78899999864322   22233334455689999999888 4578999999999999999998776


Q ss_pred             CCchhhhhhhhhccccCC
Q psy9377          88 AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        88 ~~~~~~~~~~~~qll~~~  105 (106)
                      .+++..+..++.|++.|+
T Consensus        81 ~l~~~~~~~~~~ql~~~l   98 (237)
T cd05576          81 NIPEECVKRWAAEMVVAL   98 (237)
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence            788888889999988765

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.31  E-value=2.5e-11  Score=75.30  Aligned_cols=102  Identities=25%  Similarity=0.277  Sum_probs=80.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|+|++++.+.+..       +..+
T Consensus        19 y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   98 (345)
T cd07877          19 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY   98 (345)
T ss_pred             eEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEE
Confidence            667789999999999999765  778999988532    123456789999999999999999988731       3467


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++++ +++|.++++.. .+++..+..++.|++.|+
T Consensus        99 lv~~~~-~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL  133 (345)
T cd07877          99 LVTHLM-GADLNNIVKCQ-KLTDDHVQFLIYQILRGL  133 (345)
T ss_pred             EEehhc-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence            888876 77998887654 477888888888888765

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0579|consensus

Probab=99.31  E-value=9.2e-14  Score=90.92  Aligned_cols=103  Identities=26%  Similarity=0.373  Sum_probs=85.3

Q ss_pred             CceeEeecCcceEEEEEEC--CceEEEEEec--CHHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ--NQYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      ++..||.|+||.||++..+  +-..+.|.|.  .......+.-|+.++...+||+++++++.| ..+.++++.|||.||-
T Consensus        36 IiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGA  115 (1187)
T KOG0579|consen   36 IIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGA  115 (1187)
T ss_pred             HHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCch
Confidence            4567899999999999876  3445667664  334567888999999999999999999877 6799999999999999


Q ss_pred             hHHHHhc-CCCCchhhhhhhhhccccCCC
Q psy9377          79 LYNELQR-SSAASLKFCKIYLPFWFSSSS  106 (106)
Q Consensus        79 l~~~l~~-~~~~~~~~~~~~~~qll~~~~  106 (106)
                      ++..+-. ...++++..+.++.|.+.||.
T Consensus       116 VDaimlEL~r~LtE~QIqvvc~q~ldALn  144 (1187)
T KOG0579|consen  116 VDAIMLELGRVLTEDQIQVVCYQVLDALN  144 (1187)
T ss_pred             HhHHHHHhccccchHHHHHHHHHHHHHHH
Confidence            8887765 457899999999999998863

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.31  E-value=3.2e-11  Score=72.66  Aligned_cols=103  Identities=23%  Similarity=0.348  Sum_probs=78.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhc---CCCCceeeeeeeEe-cCc-----
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSR---VSHPNIVKLYGACT-GNP-----   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~-~~~-----   66 (106)
                      |++.+.||+|++|.+|++.++  +..+++|.+...    .....+.+|+.++..   +.|+|++++.+.+. ...     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            678899999999999999886  688999988522    123345566665554   46999999999983 333     


Q ss_pred             eEEEEeecCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .++++|++.+ ++.+++....  .+++..+..++.|++.|+
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al  120 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGV  120 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHH
Confidence            8999999975 8988887643  467788888888888765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0577|consensus

Probab=99.29  E-value=4.6e-13  Score=86.97  Aligned_cols=103  Identities=23%  Similarity=0.293  Sum_probs=81.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC--H---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET--E---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~--~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |+.++.||.|+||.||-+.+.  ...|++|..+-  .   ..-+.+..|+.-+..+.|||.+...+.|. ....|+||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            566788999999999998876  67789997751  1   12346788999999999999999999994 4668999999


Q ss_pred             cCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |-| +..+++.-+ +++.+-.+.-+++..|.+|
T Consensus       108 ClG-SAsDlleVhkKplqEvEIAAi~~gaL~gL  139 (948)
T KOG0577|consen  108 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGL  139 (948)
T ss_pred             Hhc-cHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence            965 788888653 4677777777777777664

>KOG0587|consensus

Probab=99.29  E-value=2.4e-11  Score=81.33  Aligned_cols=103  Identities=26%  Similarity=0.505  Sum_probs=78.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcC-CCCceeeeeeeE------ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRV-SHPNIVKLYGAC------TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~~~~~------~~~~~~lv~   71 (106)
                      +.+..++|+|.+|.||+++.+  ++..++|+.... ....+...|..+++.. .|||+..+++++      .++.+|+||
T Consensus        21 ~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVM  100 (953)
T KOG0587|consen   21 FEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVM  100 (953)
T ss_pred             cEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEe
Confidence            456789999999999988765  788888887632 3345566677777776 589999999988      247799999


Q ss_pred             eecCCCChHHHHhcC--CCCchhhhhhhhhccccC
Q psy9377          72 EYAEGGSLYNELQRS--SAASLKFCKIYLPFWFSS  104 (106)
Q Consensus        72 e~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~  104 (106)
                      |||.|||+-++++..  ..+.+.....+++.++.+
T Consensus       101 EfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrg  135 (953)
T KOG0587|consen  101 EFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRG  135 (953)
T ss_pred             eccCCccHHHHHhhhcccchhhHHHHHHHHHHHHH
Confidence            999999999999863  346666666666665544

>KOG4645|consensus

Probab=99.28  E-value=1.4e-13  Score=94.77  Aligned_cols=102  Identities=29%  Similarity=0.503  Sum_probs=86.3

Q ss_pred             CceeEeecCcceEEEEEEC--CceEEEEEecCHH----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      ...++|.|.||.||.+...  |...++|.|...+    ....+.+|..++..+.|||+++.+++- ..+.++|.||||++
T Consensus      1239 rg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~ 1318 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEG 1318 (1509)
T ss_pred             cccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhcc
Confidence            4568999999999999765  7888988775321    234567889999999999999999887 55789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+.++..+...+.+.+.|..|++.++
T Consensus      1319 GsLa~ll~~gri~dE~vt~vyt~qll~gl 1347 (1509)
T KOG4645|consen 1319 GSLASLLEHGRIEDEMVTRVYTKQLLEGL 1347 (1509)
T ss_pred             CcHHHHHHhcchhhhhHHHHHHHHHHHHH
Confidence            99999999988888889999999999875

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.28  E-value=1.2e-11  Score=75.25  Aligned_cols=103  Identities=24%  Similarity=0.301  Sum_probs=80.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec---------Cc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG---------NP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~   66 (106)
                      |++.+.||+|++|.||.+.+.  +..+++|.+...    .......+|+.++..++|+|++++.+.+..         ..
T Consensus        10 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   89 (311)
T cd07866          10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGS   89 (311)
T ss_pred             EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCce
Confidence            667889999999999999876  678899977422    112356678999999999999999887621         24


Q ss_pred             eEEEEeecCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++++|+.+ ++...+.. ...+++..+..++.|++.||
T Consensus        90 ~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al  128 (311)
T cd07866          90 VYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGI  128 (311)
T ss_pred             EEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence            7999999865 67777765 34688888899999998875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.27  E-value=1.5e-11  Score=76.19  Aligned_cols=102  Identities=24%  Similarity=0.273  Sum_probs=81.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-C------ceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-N------PVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~------~~~   68 (106)
                      |...+.||+|.+|.+|.+...  +..+++|.+...    .....+.+|+.+++.+.|+|++++.+.+.. +      ..+
T Consensus        17 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   96 (343)
T cd07851          17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVY   96 (343)
T ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEE
Confidence            567789999999999999876  678999987532    233556788999999999999998887632 2      389


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|++ +++|.+++.. ..+++..+..++.|++.|+
T Consensus        97 lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL  131 (343)
T cd07851          97 LVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGL  131 (343)
T ss_pred             EEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence            999998 6699998876 3578888888999888765

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.27  E-value=5.3e-11  Score=74.40  Aligned_cols=77  Identities=23%  Similarity=0.255  Sum_probs=60.1

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEEecCH-------HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKHIETE-------AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~   71 (106)
                      |...+.||+|+||.||++.+.   +..+++|.+...       .....+.+|+.++..++|+|+++...  ..+..+++|
T Consensus        20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~--~~~~~~LVm   97 (365)
T PRK09188         20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLL--ATGKDGLVR   97 (365)
T ss_pred             ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEE--EcCCcEEEE
Confidence            778889999999999999764   556788875421       23456889999999999999885322  235689999


Q ss_pred             eecCCCChH
Q psy9377          72 EYAEGGSLY   80 (106)
Q Consensus        72 e~~~~g~l~   80 (106)
                      ||++|++|.
T Consensus        98 E~~~G~~L~  106 (365)
T PRK09188         98 GWTEGVPLH  106 (365)
T ss_pred             EccCCCCHH
Confidence            999999996

>KOG4279|consensus

Probab=99.25  E-value=9.3e-12  Score=82.45  Aligned_cols=100  Identities=23%  Similarity=0.345  Sum_probs=81.6

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH--HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCChH
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGSLY   80 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l~   80 (106)
                      -+||+|.||.||-++++  ....++|.+....  ..+.+..|+.+-+.++|.||++..+.+. .++.-+.||-.+||+|.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            36999999999999887  4567888886432  3567889999999999999999999885 47788999999999999


Q ss_pred             HHHhcC-CCC--chhhhhhhhhccccCC
Q psy9377          81 NELQRS-SAA--SLKFCKIYLPFWFSSS  105 (106)
Q Consensus        81 ~~l~~~-~~~--~~~~~~~~~~qll~~~  105 (106)
                      .+++.. +++  -+.-.-+|.+|||.+|
T Consensus       661 sLLrskWGPlKDNEstm~fYtkQILeGL  688 (1226)
T KOG4279|consen  661 SLLRSKWGPLKDNESTMNFYTKQILEGL  688 (1226)
T ss_pred             HHHHhccCCCccchhHHHHHHHHHHHHh
Confidence            999864 455  3455568999999875

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.24  E-value=9.5e-11  Score=72.33  Aligned_cols=103  Identities=24%  Similarity=0.271  Sum_probs=81.8

Q ss_pred             CCCceeEeecCcceEEEEEEC----CceEEEEEecCH----HHHHHHHHHHHHHhcC-CCCceeeeeeeEe---c--Cce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ----NQYVAVKHIETE----AERKAFAVEVRQLSRV-SHPNIVKLYGACT---G--NPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~----~~~~~~k~~~~~----~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~---~--~~~   67 (106)
                      |...+.||+|+||.||.+.+.    +..+++|.+...    ...+.+.+|+.++..+ .|+|++++.+...   .  ...
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            677889999999999999876    457899987531    2245567788888888 5999999988641   1  457


Q ss_pred             EEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++++. ++|.+++.....+++..++.++.|++.||
T Consensus        82 ~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL  118 (332)
T cd07857          82 YLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGL  118 (332)
T ss_pred             EEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            88899885 58999998777788898899999998875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.24  E-value=3.8e-11  Score=69.09  Aligned_cols=100  Identities=16%  Similarity=0.072  Sum_probs=67.7

Q ss_pred             ceeEeecCcceEEEEEEC-CceEEEEEecCHH----H------------------------HHHHHHHHHHHhcCCCCce
Q psy9377           5 SKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA----E------------------------RKAFAVEVRQLSRVSHPNI   55 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~----~------------------------~~~~~~~~~~~~~~~~~~i   55 (106)
                      ...||+|++|.||.+... |..+++|.++...    .                        ......|...+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            357999999999999876 8899999885321    0                        0122347777887766655


Q ss_pred             eeeeeeEecCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          56 VKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        56 ~~~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ..... ......+++|||++|+++........+++...+..++.|++.++
T Consensus        82 ~~p~~-~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L  130 (190)
T cd05147          82 PCPEP-ILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIM  130 (190)
T ss_pred             CCCcE-EEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHH
Confidence            33222 22223379999999887765544445677777888888877654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.24  E-value=1.7e-10  Score=66.07  Aligned_cols=98  Identities=36%  Similarity=0.503  Sum_probs=80.5

Q ss_pred             EeecCcceEEEEEEC--CceEEEEEecCHHH---HHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCChHH
Q psy9377           8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGSLYN   81 (106)
Q Consensus         8 lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l~~   81 (106)
                      ||+|.++.+|.+...  +..+++|.......   ...+.+|+..+..++|++++++.+.+. ....++++|++.+++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            578999999999887  78899998865433   367888999999999999999999884 477899999999899999


Q ss_pred             HHhcC-CCCchhhhhhhhhccccCC
Q psy9377          82 ELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        82 ~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ++... ...+......++.+++.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l  105 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGL  105 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHH
Confidence            99875 3566777777887777654

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.24  E-value=1.1e-10  Score=70.47  Aligned_cols=103  Identities=28%  Similarity=0.310  Sum_probs=77.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCC-CCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVS-HPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...   .....+.+|+..+..+. |+|++++++.+ ..+..++++|++
T Consensus         6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~   85 (288)
T cd06616           6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM   85 (288)
T ss_pred             hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence            345678999999999998876  688999987532   23456778888888885 99999999987 457789999998


Q ss_pred             CCCChHHHHh-----cCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQ-----RSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~-----~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .. ++.++..     ....+++..+..++.|++.|+
T Consensus        86 ~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l  120 (288)
T cd06616          86 DI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKAL  120 (288)
T ss_pred             cC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            64 5554432     234577777788888877664

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0604|consensus

Probab=99.22  E-value=2.1e-12  Score=77.87  Aligned_cols=97  Identities=22%  Similarity=0.265  Sum_probs=77.2

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHH-hcCCCCceeeeeeeEe---c--CceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQL-SRVSHPNIVKLYGACT---G--NPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~---~--~~~~lv~e~~~~g   77 (106)
                      .+||-|..|.|..|.++  ++.+++|.+...   +...+|+.+- ....|+|++.+.++|.   +  .-+.+|||+++||
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds---~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGG  144 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS---PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGG  144 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhcC---HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccch
Confidence            57899999999999876  778888877432   3445666643 3457999999999982   2  3378899999999


Q ss_pred             ChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      +|+..++.++  .+++.++..+++||-.|+
T Consensus       145 eLfsriq~~g~~afTErea~eI~~qI~~Av  174 (400)
T KOG0604|consen  145 ELFSRIQDRGDQAFTEREASEIMKQIGLAV  174 (400)
T ss_pred             HHHHHHHHcccccchHHHHHHHHHHHHHHH
Confidence            9999998765  599999999999998775

>KOG0576|consensus

Probab=99.22  E-value=8.4e-13  Score=86.24  Aligned_cols=105  Identities=25%  Similarity=0.315  Sum_probs=88.4

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      .|..+..+|+|++|.||++++.  +...++|.++..  ......+.|+.+++..+||||+.+++.+ .....++.||||.
T Consensus        16 dyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycg   95 (829)
T KOG0576|consen   16 DYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCG   95 (829)
T ss_pred             chhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecC
Confidence            3677889999999999999876  778889988633  4456677888889999999999999988 5678999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+|.+.-+-.+++++.+...+++..+.++
T Consensus        96 ggslQdiy~~TgplselqiayvcRetl~gl  125 (829)
T KOG0576|consen   96 GGSLQDIYHVTGPLSELQIAYVCRETLQGL  125 (829)
T ss_pred             CCcccceeeecccchhHHHHHHHhhhhccc
Confidence            999999888888888888888887776654

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.21  E-value=1.9e-10  Score=69.93  Aligned_cols=103  Identities=23%  Similarity=0.300  Sum_probs=77.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |.+.+.+|+|++|.||++.+.  +..+++|.++..   .....+..++..+... .|+|++++.+.+ .....+++||++
T Consensus        17 ~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   96 (296)
T cd06618          17 LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELM   96 (296)
T ss_pred             heeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeecc
Confidence            567889999999999999887  788999988532   2334556666655555 599999999998 457799999998


Q ss_pred             CCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+ ++..++.. ...++......++.|++.++
T Consensus        97 ~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l  127 (296)
T cd06618          97 ST-CLDKLLKRIQGPIPEDILGKMTVAIVKAL  127 (296)
T ss_pred             Cc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            54 77777665 34566677677888877654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG2345|consensus

Probab=99.21  E-value=8.5e-12  Score=73.46  Aligned_cols=105  Identities=18%  Similarity=0.199  Sum_probs=83.4

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEec--CHHHHHHHHHHHHHHhcCCCCceeeeeeeE-----e-cCceEEE
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGAC-----T-GNPVCLV   70 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~-~~~~~lv   70 (106)
                      .|.+.+.+|+|+|+.|+..+.-  +..+|+|.+.  ........++|+...+.++|||++++.+..     + ....|++
T Consensus        22 Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll  101 (302)
T KOG2345|consen   22 RYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLL  101 (302)
T ss_pred             eEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEE
Confidence            3778899999999999988743  7889999764  335567789999999999999999998766     1 2458999


Q ss_pred             EeecCCCChHHHHhcC---C-CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS---S-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~---~-~~~~~~~~~~~~qll~~~  105 (106)
                      ++|...|+|.+.+...   + .+++.....++.++..||
T Consensus       102 ~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL  140 (302)
T KOG2345|consen  102 LPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGL  140 (302)
T ss_pred             eehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHH
Confidence            9999999999999753   2 467777777777766554

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.19  E-value=6.2e-11  Score=76.96  Aligned_cols=103  Identities=16%  Similarity=0.201  Sum_probs=71.7

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEE------------------ec-CHHHHHHHHHHHHHHhcCCCCceeeee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKH------------------IE-TEAERKAFAVEVRQLSRVSHPNIVKLY   59 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~------------------~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~   59 (106)
                      |.+.+.||+|+||.||.+..+   +...+.+.                  +. .......+.+|+.++..++|+|++++.
T Consensus       150 Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~  229 (501)
T PHA03210        150 FRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIE  229 (501)
T ss_pred             cEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEe
Confidence            778899999999999988654   11111110                  00 111234567899999999999999999


Q ss_pred             eeE-ecCceEEEEeecCCCChHHHHhcCC-----CCchhhhhhhhhccccCC
Q psy9377          60 GAC-TGNPVCLVMEYAEGGSLYNELQRSS-----AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        60 ~~~-~~~~~~lv~e~~~~g~l~~~l~~~~-----~~~~~~~~~~~~qll~~~  105 (106)
                      +++ ..+..+++++++.+ ++.+++....     ......++.++.|++.||
T Consensus       230 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL  280 (501)
T PHA03210        230 EILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAV  280 (501)
T ss_pred             EEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHH
Confidence            998 45778999999854 7877775422     123455677888888765

>KOG0671|consensus

Probab=99.18  E-value=1.2e-11  Score=76.29  Aligned_cols=104  Identities=21%  Similarity=0.296  Sum_probs=82.5

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-HHHHHHHHHHHHhcCC--CC----ceeeeeeeE-ecCceEEE
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-ERKAFAVEVRQLSRVS--HP----NIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~--~~----~i~~~~~~~-~~~~~~lv   70 (106)
                      .|.+.+.+|+|.||.|.++.++  +..+++|+++.-. -.+....|+.+++.+.  .|    ..+.+.+|| ..++.++|
T Consensus        90 Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCiv  169 (415)
T KOG0671|consen   90 RYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIV  169 (415)
T ss_pred             ceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEE
Confidence            3778899999999999999887  5788999886433 3456677888888873  22    255666777 46999999


Q ss_pred             EeecCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+ |-|+++++..+.  +++.+.++.+..||+.++
T Consensus       170 fell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv  205 (415)
T KOG0671|consen  170 FELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESV  205 (415)
T ss_pred             Eecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHH
Confidence            9988 669999999865  688899999999998875

>PRK10345 hypothetical protein; Provisional

Probab=99.17  E-value=2e-10  Score=67.02  Aligned_cols=98  Identities=12%  Similarity=0.158  Sum_probs=67.6

Q ss_pred             CCceeEeecCcceEEEEEECCceEEEEEecCH--HHHHHHHHHHHHHhcC-----CCCceeeeeeeEecC----ceE-EE
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQNQYVAVKHIETE--AERKAFAVEVRQLSRV-----SHPNIVKLYGACTGN----PVC-LV   70 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~----~~~-lv   70 (106)
                      +....||+|+++.||........ ++|.+...  .....+.+|+.++..+     .||||+++++++.++    .++ +|
T Consensus         5 ~~~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          5 SEQSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             CCcceecCCCceEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            45678999999999962222333 67776532  2345688999999988     579999999999432    334 78


Q ss_pred             Eee--cCCCChHHHHhcCCCCchhhhhhhhhccccC
Q psy9377          71 MEY--AEGGSLYNELQRSSAASLKFCKIYLPFWFSS  104 (106)
Q Consensus        71 ~e~--~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~  104 (106)
                      +||  +.+|+|.+++++. .++++  ..++.|++.+
T Consensus        84 ~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~  116 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKK  116 (210)
T ss_pred             ecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHH
Confidence            999  5579999999764 34444  2345555543

>KOG0695|consensus

Probab=99.16  E-value=8.3e-12  Score=76.78  Aligned_cols=104  Identities=19%  Similarity=0.305  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcC-CCCceeeeeeeEec-CceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRV-SHPNIVKLYGACTG-NPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~~lv~e   72 (106)
                      |..+.+||+|++++|..+...  .+.+++|.++++     ....+++.|-.+..+. .||.++-+.+.|.+ ..+++|.|
T Consensus       252 f~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvie  331 (593)
T KOG0695|consen  252 FDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIE  331 (593)
T ss_pred             ceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEE
Confidence            567889999999999887765  788999988643     2345777787777776 57999999988855 66899999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+||+|.-.+++...++++.+++|-..|..||
T Consensus       332 yv~ggdlmfhmqrqrklpeeharfys~ei~lal  364 (593)
T KOG0695|consen  332 YVNGGDLMFHMQRQRKLPEEHARFYSAEICLAL  364 (593)
T ss_pred             EecCcceeeehhhhhcCcHHHhhhhhHHHHHHH
Confidence            999999999999888899999999988776664

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.15  E-value=3e-10  Score=65.33  Aligned_cols=100  Identities=14%  Similarity=0.025  Sum_probs=66.7

Q ss_pred             ceeEeecCcceEEEEEEC-CceEEEEEecCHHH----------------------------HHHHHHHHHHHhcCCCCce
Q psy9377           5 SKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEAE----------------------------RKAFAVEVRQLSRVSHPNI   55 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~i   55 (106)
                      ...||+|++|.||++.+. |..+++|.++....                            ......|...+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            568999999999999876 88999998763210                            1123467777778877776


Q ss_pred             eeeeeeEecCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          56 VKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        56 ~~~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ........ ...+++|||++|+++.........++......++.|++.++
T Consensus        82 ~~p~~~~~-~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l  130 (190)
T cd05145          82 PVPEPILL-KKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQM  130 (190)
T ss_pred             CCceEEEe-cCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHH
Confidence            44333222 23489999998875544322334456667777777777654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0696|consensus

Probab=99.15  E-value=5.5e-12  Score=79.25  Aligned_cols=104  Identities=22%  Similarity=0.317  Sum_probs=78.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcC-CCCceeeeeeeEec-CceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRV-SHPNIVKLYGACTG-NPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~~lv~e   72 (106)
                      |..+.+||+|+||.|..+..+  ...+++|+++..     +..+--..|-+++... +.|.++++++.|.+ +.+|+|||
T Consensus       351 FnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVME  430 (683)
T KOG0696|consen  351 FNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVME  430 (683)
T ss_pred             cceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEE
Confidence            677889999999999999877  467899877532     1122223344444444 45678888888844 88999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+.||+|.-.+++-+.+.++.|..|...|..+|
T Consensus       431 yvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigL  463 (683)
T KOG0696|consen  431 YVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGL  463 (683)
T ss_pred             EecCchhhhHHHHhcccCCchhhhhhHHHHHHh
Confidence            999999999999888899999988887776554

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.14  E-value=3.8e-10  Score=69.98  Aligned_cols=101  Identities=23%  Similarity=0.266  Sum_probs=78.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |...+.||+|++|.||++.+.  +..+++|.+...    .....+.+|+.++..++|+|++++.+.+..       ...+
T Consensus        17 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~   96 (342)
T cd07879          17 YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFY   96 (342)
T ss_pred             eEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEE
Confidence            567789999999999999865  788999987532    123456789999999999999999988732       2468


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|++.. ++..+..  ..++.+.+..++.|++.|+
T Consensus        97 lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL  130 (342)
T cd07879          97 LVMPYMQT-DLQKIMG--HPLSEDKVQYLVYQMLCGL  130 (342)
T ss_pred             EEeccccc-CHHHHHc--CCCCHHHHHHHHHHHHHHH
Confidence            99999864 7776653  2467788888888887765

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0668|consensus

Probab=99.13  E-value=7.1e-12  Score=73.40  Aligned_cols=101  Identities=19%  Similarity=0.311  Sum_probs=81.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCC-CCceeeeeeeEe-c--CceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGACT-G--NPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~--~~~~lv~e~~~   75 (106)
                      |++.+.+|+|.++.|+.+...  +.+.++|.+++ -....+.+|+.++..++ +||++++.++.. +  ..+.+++|+..
T Consensus        40 Yeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~  118 (338)
T KOG0668|consen   40 YEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVN  118 (338)
T ss_pred             HHHHHHHcCccHhhHhcccccCCCceEEEeeech-HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhc
Confidence            567788999999999998754  67888888853 23456889999999986 999999999983 2  45889999998


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSSS  106 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~~  106 (106)
                      +.+...+-.   .++....+.++.++|.||.
T Consensus       119 n~Dfk~ly~---tl~d~dIryY~~elLkALd  146 (338)
T KOG0668|consen  119 NTDFKQLYP---TLTDYDIRYYIYELLKALD  146 (338)
T ss_pred             cccHHHHhh---hhchhhHHHHHHHHHHHHh
Confidence            877666554   3788899999999999873

>KOG0669|consensus

Probab=99.08  E-value=2e-13  Score=80.75  Aligned_cols=103  Identities=25%  Similarity=0.300  Sum_probs=81.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEec----CHHHHHHHHHHHHHHhcCCCCceeeeeeeEe----c-----Cc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT----G-----NP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~-----~~   66 (106)
                      |.....+|+|.||.|+++..+  +..+++|.+-    .........+|+.++..++|+|++.+.++|.    +     ..
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            445678999999999988765  6667776442    2233456788999999999999999998882    1     34


Q ss_pred             eEEEEeecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      .++|+++|++ +|..++.+. ..++....+.+|.+++++|
T Consensus        99 ~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL  137 (376)
T KOG0669|consen   99 FYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGL  137 (376)
T ss_pred             eeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHH
Confidence            8999999987 999999875 5788889999999998875

>KOG0596|consensus

Probab=99.07  E-value=2.8e-10  Score=73.52  Aligned_cols=103  Identities=23%  Similarity=0.298  Sum_probs=82.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEec----CHHHHHHHHHHHHHHhcCC-CCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIE----TEAERKAFAVEVRQLSRVS-HPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~----~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |++++.||+|+-+.||++... .+.+++|.+.    .......+.+|+.++..++ |.+|+.++++- ..+.+|+|||+-
T Consensus       363 Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G  442 (677)
T KOG0596|consen  363 YEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG  442 (677)
T ss_pred             hhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc
Confidence            788999999999999998766 4566776553    2345678999999999985 78999999987 568899999976


Q ss_pred             CCCChHHHHhcCCC-CchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSA-ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~-~~~~~~~~~~~qll~~~  105 (106)
                      +. +|-.+|++... ++..+.+.|..|+|.|+
T Consensus       443 d~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV  473 (677)
T KOG0596|consen  443 DI-DLNKILKKKKSIDPDWFLKFYWKQMLLAV  473 (677)
T ss_pred             cc-cHHHHHHhccCCCchHHHHHHHHHHHHHH
Confidence            54 99999987653 44457788888888764

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.05  E-value=1.4e-09  Score=63.64  Aligned_cols=94  Identities=32%  Similarity=0.525  Sum_probs=75.6

Q ss_pred             CcceEEEEEEC--CceEEEEEecCHHH---HHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCChHHHHhc
Q psy9377          12 AFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQR   85 (106)
Q Consensus        12 ~~~~v~~~~~~--~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l~~~l~~   85 (106)
                      +||.+|++...  +..+++|.+.....   ...+..|+..+..++|++++++.+.+. ....++++|+..+++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            47889999876  57899998864322   567888999999999999999998884 4778999999999999999987


Q ss_pred             CCCCchhhhhhhhhccccCC
Q psy9377          86 SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        86 ~~~~~~~~~~~~~~qll~~~  105 (106)
                      ...++......++.+++.++
T Consensus        81 ~~~~~~~~~~~~~~~l~~~l  100 (244)
T smart00220       81 RGRLSEDEARFYARQILSAL  100 (244)
T ss_pred             ccCCCHHHHHHHHHHHHHHH
Confidence            65566777777777776554

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0200|consensus

Probab=99.02  E-value=2.3e-09  Score=71.22  Aligned_cols=84  Identities=42%  Similarity=0.662  Sum_probs=69.0

Q ss_pred             CceeEeecCcceEEEEEEC---------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEec-CceEE
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ---------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACTG-NPVCL   69 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~---------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~~l   69 (106)
                      +.+.+|+|.||.|+++...         ...+++|..+..   .....+..|+.+++.+ .|+|++.+.+.++. +..++
T Consensus       300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~  379 (609)
T KOG0200|consen  300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYV  379 (609)
T ss_pred             ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEE
Confidence            4568999999999988643         235788876532   3456788999999987 59999999999955 88999


Q ss_pred             EEeecCCCChHHHHhcCC
Q psy9377          70 VMEYAEGGSLYNELQRSS   87 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~   87 (106)
                      +.||+.+|+|.++++.++
T Consensus       380 v~Ey~~~G~L~~~Lr~~r  397 (609)
T KOG0200|consen  380 IVEYAEHGDLLEFLRKKR  397 (609)
T ss_pred             EEEeccCCcHHHHHHhcc
Confidence            999999999999999766

>smart00090 RIO RIO-like kinase

Probab=99.01  E-value=7.4e-10  Score=65.79  Aligned_cols=104  Identities=18%  Similarity=0.099  Sum_probs=67.7

Q ss_pred             CCCCceeEeecCcceEEEEE-E-C-CceEEEEEecCHH--------------------------HHHHHHHHHHHHhcCC
Q psy9377           1 MLGGSKIVGQGAFGVVWKGL-W-Q-NQYVAVKHIETEA--------------------------ERKAFAVEVRQLSRVS   51 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~-~-~-~~~~~~k~~~~~~--------------------------~~~~~~~~~~~~~~~~   51 (106)
                      +|++.+.||+|++|.||.+. + . +..+++|.++...                          ....+..|...+..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            36678899999999999998 3 3 7899999875211                          0122456888877776


Q ss_pred             CCceeeeeeeEecCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          52 HPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        52 ~~~i~~~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.. +.....+.....+++||++.|+++..............+..++.|++.++
T Consensus       109 ~~~-i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l  161 (237)
T smart00090      109 EAG-VPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEM  161 (237)
T ss_pred             hcC-CCCCeeeEecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHH
Confidence            422 22222222234589999999988876654333444445567777877654

>KOG0986|consensus

Probab=99.00  E-value=2.9e-10  Score=72.05  Aligned_cols=104  Identities=23%  Similarity=0.323  Sum_probs=83.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+.-++||+|+||.|+-|+.+  |.-++.|.+...     ......++|-.++..++.+.|+.+.-.| +.+.+++|+..
T Consensus       187 F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtl  266 (591)
T KOG0986|consen  187 FRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTL  266 (591)
T ss_pred             eeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEe
Confidence            456688999999999988766  777888776422     2234567888899999999999997667 56889999999


Q ss_pred             cCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      |.||+|.-.|-+.+  .++++.+.+|..+|.-+|
T Consensus       267 MNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGL  300 (591)
T KOG0986|consen  267 MNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGL  300 (591)
T ss_pred             ecCCceeEEeeccCCCCCchHHHHHHHHHHHhhH
Confidence            99999988887665  688899999999887654

>KOG1345|consensus

Probab=98.99  E-value=1.6e-10  Score=69.26  Aligned_cols=103  Identities=19%  Similarity=0.279  Sum_probs=82.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-HHHHHHHHHHHHhcCC-CCceeeeeeeE--ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-ERKAFAVEVRQLSRVS-HPNIVKLYGAC--TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~-~~~i~~~~~~~--~~~~~~lv~e~~~   75 (106)
                      |.+.+.+|+|-||.+..+.++  ...+++|.++.+. ...++.+|...---++ |.||+.-++..  +.+.+.+++||++
T Consensus        26 y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP  105 (378)
T KOG1345|consen   26 YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAP  105 (378)
T ss_pred             hhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCc
Confidence            667788999999999999988  5678889887553 4567888877555554 78888777655  4477888999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .|+|..-+..++ ..+..++.+..|+++||
T Consensus       106 ~gdL~snv~~~G-igE~~~K~v~~ql~SAi  134 (378)
T KOG1345|consen  106 RGDLRSNVEAAG-IGEANTKKVFAQLLSAI  134 (378)
T ss_pred             cchhhhhcCccc-ccHHHHHHHHHHHHHHH
Confidence            999998887755 67778889999999886

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.98  E-value=3.1e-09  Score=61.78  Aligned_cols=81  Identities=21%  Similarity=0.253  Sum_probs=61.9

Q ss_pred             eeEeecCcceEEEEEECCceEEEEEecCHH----------HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEA----------ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      +.||+|++|.||++.+.+..+++|......          ....+.+|+..+..+.++++......+ ..+..+++|||+
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            578999999999998888888888654210          123467788888888888776655555 456788999999


Q ss_pred             CCCChHHHHhcC
Q psy9377          75 EGGSLYNELQRS   86 (106)
Q Consensus        75 ~~g~l~~~l~~~   86 (106)
                      +|++|.+++...
T Consensus        82 ~G~~L~~~~~~~   93 (211)
T PRK14879         82 EGEPLKDLINSN   93 (211)
T ss_pred             CCcCHHHHHHhc
Confidence            999999988653

>KOG1167|consensus

Probab=98.95  E-value=3.7e-10  Score=70.41  Aligned_cols=101  Identities=26%  Similarity=0.358  Sum_probs=84.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCHHHHHHHHHHHHHHhcCC-CCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |...+++|+|+|+.||.+.+.     +..+++|.+........+.+|+.++..+. +.|++++.+.+ ..+++.+|+||+
T Consensus        38 ~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~  117 (418)
T KOG1167|consen   38 YKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYF  117 (418)
T ss_pred             hhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEeccc
Confidence            567889999999999988643     56889998876666677889999999885 67899998888 468899999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++.+..++...   ++..+++.|++.+|.|+
T Consensus       118 ~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al  145 (418)
T KOG1167|consen  118 EHDRFRDLYRS---LSLAEIRWYLRNLLKAL  145 (418)
T ss_pred             CccCHHHHHhc---CCHHHHHHHHHHHHHHh
Confidence            99888888765   66888899999999886

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.91  E-value=5e-09  Score=68.19  Aligned_cols=84  Identities=23%  Similarity=0.407  Sum_probs=55.7

Q ss_pred             CCCceeEeecCcceEEEEEEC------------------CceEEEEEecCH--HHHHHH--------------HHHHHHH
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ------------------NQYVAVKHIETE--AERKAF--------------AVEVRQL   47 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~------------------~~~~~~k~~~~~--~~~~~~--------------~~~~~~~   47 (106)
                      |.+.+.||+|+||.||++...                  +..+++|.+...  .....+              ..|+..+
T Consensus       147 F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l  226 (507)
T PLN03224        147 FQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMC  226 (507)
T ss_pred             ceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHH
Confidence            677899999999999998531                  356899987521  111122              2344555


Q ss_pred             hcCCCCce-----eeeeeeE---------ecCceEEEEeecCCCChHHHHhc
Q psy9377          48 SRVSHPNI-----VKLYGAC---------TGNPVCLVMEYAEGGSLYNELQR   85 (106)
Q Consensus        48 ~~~~~~~i-----~~~~~~~---------~~~~~~lv~e~~~~g~l~~~l~~   85 (106)
                      ..++|.++     +++.+.+         ..+..++|+||+++++|.++++.
T Consensus       227 ~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~  278 (507)
T PLN03224        227 AKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDG  278 (507)
T ss_pred             HHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhh
Confidence            55555443     3444443         23568999999999999999874

>KOG0614|consensus

Probab=98.91  E-value=4.2e-11  Score=76.80  Aligned_cols=103  Identities=20%  Similarity=0.251  Sum_probs=85.4

Q ss_pred             CCceeEeecCcceEEEEEECCc--eEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQNQ--YVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~--~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      +++..||-|+||.|-....+++  .+++|++++.     ...+.+..|-.+|...+++.|++++..| +..++|++||-|
T Consensus       423 ~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaC  502 (732)
T KOG0614|consen  423 KRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEAC  502 (732)
T ss_pred             hhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhh
Confidence            4567899999999988776643  3788877643     2345677888999999999999999988 558899999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      -||+++..+++++.+.++.+++++..++.|+
T Consensus       503 lGGElWTiLrdRg~Fdd~tarF~~acv~EAf  533 (732)
T KOG0614|consen  503 LGGELWTILRDRGSFDDYTARFYVACVLEAF  533 (732)
T ss_pred             cCchhhhhhhhcCCcccchhhhhHHHHHHHH
Confidence            9999999999999999999999988777664

>KOG0670|consensus

Probab=98.85  E-value=1.2e-09  Score=70.46  Aligned_cols=103  Identities=24%  Similarity=0.288  Sum_probs=81.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-HHHHHHHHHHHHHHhcCCC------CceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-EAERKAFAVEVRQLSRVSH------PNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~------~~i~~~~~~~-~~~~~~lv~   71 (106)
                      |.+....|+|-|+.|..|.+.  +..||+|+|+. +-+...-+.|+.+++.+..      -+.+.++..| ..+++|+|+
T Consensus       434 Y~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVF  513 (752)
T KOG0670|consen  434 YEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVF  513 (752)
T ss_pred             eEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEe
Confidence            566677899999999999876  78999999974 3456666788999888742      2566666666 569999999


Q ss_pred             eecCCCChHHHHhcCC---CCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSS---AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~---~~~~~~~~~~~~qll~~~  105 (106)
                      |-+ ..+|-+.|++.+   .+..+.++.|..|+|.||
T Consensus       514 E~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflAL  549 (752)
T KOG0670|consen  514 EPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLAL  549 (752)
T ss_pred             hhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHH
Confidence            988 458999998643   577888999999999886

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.82  E-value=5e-08  Score=64.13  Aligned_cols=82  Identities=21%  Similarity=0.219  Sum_probs=59.8

Q ss_pred             CCceeEeecCcceEEEEEECCceEEEEEe-c----CH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEE
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQNQYVAVKHI-E----TE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~~~~~k~~-~----~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      ...+.||+|+||.||++.+.+..+++|.. .    ..     .....+.+|..++..++++++....... .....+++|
T Consensus       336 ~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~  415 (535)
T PRK09605        336 IPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM  415 (535)
T ss_pred             CccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence            45678999999999998776444444322 1    11     1134577899999999999887765544 446678999


Q ss_pred             eecCCCChHHHHh
Q psy9377          72 EYAEGGSLYNELQ   84 (106)
Q Consensus        72 e~~~~g~l~~~l~   84 (106)
                      ||++|++|.+++.
T Consensus       416 E~~~g~~L~~~l~  428 (535)
T PRK09605        416 EYIGGKDLKDVLE  428 (535)
T ss_pred             EecCCCcHHHHHH
Confidence            9999999998885

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.81  E-value=1.1e-08  Score=59.10  Aligned_cols=80  Identities=21%  Similarity=0.297  Sum_probs=57.5

Q ss_pred             eEeecCcceEEEEEECCceEEEEEecCH-----H-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           7 IVGQGAFGVVWKGLWQNQYVAVKHIETE-----A-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~~~~~~~k~~~~~-----~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      .||+|++|.||++.+.+..+++|.....     .     ....+.+|..++..+.++++....... ..+..+++|||++
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            3799999999999877888888875321     0     124466788888888776544333223 4566789999999


Q ss_pred             CCChHHHHhcC
Q psy9377          76 GGSLYNELQRS   86 (106)
Q Consensus        76 ~g~l~~~l~~~   86 (106)
                      |+++.+++...
T Consensus        81 g~~l~~~~~~~   91 (199)
T TIGR03724        81 GKPLKDVIEEG   91 (199)
T ss_pred             CccHHHHHhhc
Confidence            99999887653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0603|consensus

Probab=98.80  E-value=1.7e-09  Score=70.45  Aligned_cols=101  Identities=25%  Similarity=0.249  Sum_probs=78.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhc-CCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSR-VSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      |.....+|.|+|+.+..+.+.  +..+++|++...  ....++|+.++.. -+|+|++++.+.+ +..+.++|||.+.|+
T Consensus       324 y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~--~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~  401 (612)
T KOG0603|consen  324 YEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR--ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGG  401 (612)
T ss_pred             hccccccCCCCccceeeeeccccccchhheecccc--ccccccccchhhhhcCCCcceeecceecCCceeeeeehhcccc
Confidence            455566899999999988776  678888988644  2233455544444 4799999999999 568899999999999


Q ss_pred             ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+.+.+.....+. .++..|+.+|.+|+
T Consensus       402 ell~ri~~~~~~~-~e~~~w~~~lv~Av  428 (612)
T KOG0603|consen  402 ELLRRIRSKPEFC-SEASQWAAELVSAV  428 (612)
T ss_pred             HHHHHHHhcchhH-HHHHHHHHHHHHHH
Confidence            9998888766555 67778999998875

>KOG1035|consensus

Probab=98.77  E-value=4e-09  Score=73.23  Aligned_cols=61  Identities=33%  Similarity=0.499  Sum_probs=52.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGAC   62 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~   62 (106)
                      |+.+..||+|+||.|++++.+  |..||+|.|+...   ....+.+|+..+.++.|||+++.+..|
T Consensus       481 FEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAW  546 (1351)
T KOG1035|consen  481 FEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAW  546 (1351)
T ss_pred             hHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhh
Confidence            456778999999999999887  8999999987442   345688999999999999999998776

>KOG1163|consensus

Probab=98.73  E-value=2e-08  Score=59.64  Aligned_cols=101  Identities=20%  Similarity=0.211  Sum_probs=72.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCC-CceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSH-PNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      |..+++||+|+||.+|.+...  |..||+|.=+.......+..|..+...+++ ..+..+..... ..+-.+|||++ |.
T Consensus        17 y~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GP   95 (341)
T KOG1163|consen   17 YKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GP   95 (341)
T ss_pred             eEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-Cc
Confidence            567889999999999999765  889999965433333446667777777764 44444444443 36678999988 77


Q ss_pred             ChHHHHhcC-CCCchhhhhhhhhcccc
Q psy9377          78 SLYNELQRS-SAASLKFCKIYLPFWFS  103 (106)
Q Consensus        78 ~l~~~l~~~-~~~~~~~~~~~~~qll~  103 (106)
                      +|+++...+ ..++.+.+..+..|++.
T Consensus        96 sLEdLfnfC~R~ftmkTvLMLaDQml~  122 (341)
T KOG1163|consen   96 SLEDLFNFCSRRFTMKTVLMLADQMLS  122 (341)
T ss_pred             cHHHHHHHHhhhhhHHhHHHHHHHHHH
Confidence            999888764 35777766667777654

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.73  E-value=7.1e-08  Score=57.08  Aligned_cols=82  Identities=16%  Similarity=0.060  Sum_probs=63.1

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHH-----HHHH------HHHHHHHHhcCCCCceeeeeeeEe-------
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEA-----ERKA------FAVEVRQLSRVSHPNIVKLYGACT-------   63 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~-----~~~~------~~~~~~~~~~~~~~~i~~~~~~~~-------   63 (106)
                      |...+.+|+|+||.|+.....+..+++|.+++..     ....      +.+|+..+..+.|+++..+.+.+.       
T Consensus        33 y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~  112 (232)
T PRK10359         33 IKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTL  112 (232)
T ss_pred             eEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccc
Confidence            6778999999999999876666789999886321     1112      467888888889999988877642       


Q ss_pred             --cCceEEEEeecCCCChHHHH
Q psy9377          64 --GNPVCLVMEYAEGGSLYNEL   83 (106)
Q Consensus        64 --~~~~~lv~e~~~~g~l~~~l   83 (106)
                        .+..+++|||++|.+|.++.
T Consensus       113 ~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359        113 RYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             cccCCeEEEEEEECCccHHHhh
Confidence              23589999999999998774

>KOG1027|consensus

Probab=98.66  E-value=2.5e-08  Score=67.14  Aligned_cols=102  Identities=24%  Similarity=0.286  Sum_probs=75.4

Q ss_pred             CCCceeEeecCcce-EEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGV-VWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~-v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |...+.+|.|+-|. ||++.+.++.||+|.+- .....-+++|+..++.- .|||+++.++.- +....|+..|.|.. +
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll-~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-s  588 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLL-EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-S  588 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeCCceehHHHHh-hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-h
Confidence            44556788888877 78999999999999763 23345577899988887 599999988766 45779999999966 9


Q ss_pred             hHHHHhcCCC----CchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSSA----ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~~----~~~~~~~~~~~qll~~~  105 (106)
                      |.+++.....    ...-.+..++.|+.+++
T Consensus       589 L~dlie~~~~d~~~~~~i~~~~~l~q~~~Gl  619 (903)
T KOG1027|consen  589 LQDLIESSGLDVEMQSDIDPISVLSQIASGL  619 (903)
T ss_pred             HHHHHhccccchhhcccccHHHHHHHHHHHH
Confidence            9999987411    11133466777777654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.64  E-value=8.5e-08  Score=55.47  Aligned_cols=81  Identities=23%  Similarity=0.190  Sum_probs=54.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH------------------------HHHHHHHHHHHHhcCCCCcee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA------------------------ERKAFAVEVRQLSRVSHPNIV   56 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~------------------------~~~~~~~~~~~~~~~~~~~i~   56 (106)
                      |...+.||+|++|.||++... +..+++|.++...                        .......|...+..+.++++ 
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i-   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF-   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC-
Confidence            667788999999999999775 8899999764211                        01124556666666655532 


Q ss_pred             eeeeeEecCceEEEEeecCCCChHHHH
Q psy9377          57 KLYGACTGNPVCLVMEYAEGGSLYNEL   83 (106)
Q Consensus        57 ~~~~~~~~~~~~lv~e~~~~g~l~~~l   83 (106)
                      ...........+++|||++|+++.+..
T Consensus        96 ~v~~~~~~~~~~lv~e~~~g~~L~~~~  122 (198)
T cd05144          96 PVPKPIDWNRHAVVMEYIDGVELYRVR  122 (198)
T ss_pred             CCCceeecCCceEEEEEeCCcchhhcc
Confidence            111222334568999999999887654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.63  E-value=9.1e-08  Score=63.32  Aligned_cols=83  Identities=20%  Similarity=0.249  Sum_probs=50.8

Q ss_pred             CCCceeEeecCcceEEEEEEC------CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeee------E-ecCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGA------C-TGNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~-~~~~~~   68 (106)
                      |...+.||+|+||.||++.+.      +..+++|.+......+...++.  +....+.++......      . .....+
T Consensus       134 y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (566)
T PLN03225        134 FVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNER--VRRACPNSCADFVYGFLEPVSSKKEDEYW  211 (566)
T ss_pred             eEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHH--HHhhchhhHHHHHHhhhcccccccCCceE
Confidence            567789999999999999875      4688999875322221111111  111111111111111      1 236689


Q ss_pred             EEEeecCCCChHHHHhcC
Q psy9377          69 LVMEYAEGGSLYNELQRS   86 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~   86 (106)
                      +++||+.+++|.+++...
T Consensus       212 LV~ey~~~gsL~~~l~~~  229 (566)
T PLN03225        212 LVWRYEGESTLADLMQSK  229 (566)
T ss_pred             EEEEecCCCcHHHHHHhc
Confidence            999999999999998754

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.58  E-value=5e-07  Score=55.11  Aligned_cols=103  Identities=17%  Similarity=0.169  Sum_probs=65.1

Q ss_pred             CCCceeEeecCcceEEEEEECC-----ceEEEEEec--CHHH-H----------HHHHHHHHHHhcCCCCceeeeeeeEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN-----QYVAVKHIE--TEAE-R----------KAFAVEVRQLSRVSHPNIVKLYGACT   63 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~-----~~~~~k~~~--~~~~-~----------~~~~~~~~~~~~~~~~~i~~~~~~~~   63 (106)
                      |.+.+.||+|+||.||++...+     ..+++|...  .... .          .....+...+..+.|++++++++...
T Consensus        14 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~   93 (294)
T PHA02882         14 WKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGS   93 (294)
T ss_pred             eEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeee
Confidence            6778899999999999998652     244555432  1100 0          01112233455678999999887652


Q ss_pred             c-----CceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          64 G-----NPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        64 ~-----~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .     ...+++++++.. ++.+.++.....++..+..++.|++.|+
T Consensus        94 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l  139 (294)
T PHA02882         94 FKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTL  139 (294)
T ss_pred             EecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHH
Confidence            2     134677777643 6777776544456677778888888765

>KOG0664|consensus

Probab=98.53  E-value=3e-09  Score=64.17  Aligned_cols=101  Identities=23%  Similarity=0.326  Sum_probs=81.0

Q ss_pred             CceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec------CceEEEE
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG------NPVCLVM   71 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~lv~   71 (106)
                      .-+.||=|.||.||...+.  ++.+++|.+..-    -....+.+|+.++.-.+|.|++...++..+      .++|+++
T Consensus        57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T  136 (449)
T KOG0664|consen   57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT  136 (449)
T ss_pred             CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence            4467999999999988765  677787766421    234567889999999999999999888743      3478889


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |++.. +|...+-..++++.+.++.++.||+.+|
T Consensus       137 ELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGL  169 (449)
T KOG0664|consen  137 ELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGL  169 (449)
T ss_pred             HHHHh-hhhheeccCCCCCcchhhhhHHHHHhhh
Confidence            98865 8999988888899999999999999775

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.47  E-value=5e-07  Score=49.36  Aligned_cols=78  Identities=18%  Similarity=0.150  Sum_probs=58.2

Q ss_pred             CceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCC--CceeeeeeeE-ecCceEEEEeecCCCChH
Q psy9377           4 GSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH--PNIVKLYGAC-TGNPVCLVMEYAEGGSLY   80 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~-~~~~~~lv~e~~~~g~l~   80 (106)
                      ..+.+++|.++.+|++...+..+++|..........+..|...+..+++  ..+.++.... ..+..++++|++.++++.
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~   81 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD   81 (155)
T ss_pred             cceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence            4678999999999999887778888987543224457778887777765  4666666655 346789999999887775


Q ss_pred             H
Q psy9377          81 N   81 (106)
Q Consensus        81 ~   81 (106)
                      .
T Consensus        82 ~   82 (155)
T cd05120          82 E   82 (155)
T ss_pred             c
Confidence            3

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1164|consensus

Probab=98.41  E-value=7.8e-07  Score=55.15  Aligned_cols=103  Identities=20%  Similarity=0.172  Sum_probs=72.8

Q ss_pred             CCCceeEeecCcceEEEEEECC---ceEEEEEecCHHH--HHHHHHHHHHHhcCC----CCceeeeeeeE-e-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN---QYVAVKHIETEAE--RKAFAVEVRQLSRVS----HPNIVKLYGAC-T-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~---~~~~~k~~~~~~~--~~~~~~~~~~~~~~~----~~~i~~~~~~~-~-~~~~~lv   70 (106)
                      |.+.+.||+|+||.||.+.+..   ..+++|.-.....  ...+..|..++..+.    .+++..+.+.. . ...-++|
T Consensus        20 ~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iV   99 (322)
T KOG1164|consen   20 YKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIV   99 (322)
T ss_pred             eEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEE
Confidence            6778999999999999998763   3677776543211  114556777666664    25677777666 2 3568999


Q ss_pred             EeecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      |+.+ |.+|.++....  +.++..-+..+..|++.||
T Consensus       100 M~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l  135 (322)
T KOG1164|consen  100 MSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNAL  135 (322)
T ss_pred             Eecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHH
Confidence            9987 77999988543  4577777778888887765

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.41  E-value=6.1e-06  Score=49.86  Aligned_cols=102  Identities=32%  Similarity=0.465  Sum_probs=80.2

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHH-----HHHHHHHHHHHHhcCCCC-ceeeeeeeEec-CceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHP-NIVKLYGACTG-NPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~-~~~~lv~e~~   74 (106)
                      |.....+|.|+|+.||.+.+. ..+++|.+....     ....+.+|...+..+.++ +++++.+.+.. ...+++++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   80 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV   80 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence            566788999999999998877 566777765321     355678888888999887 69999888844 4479999999


Q ss_pred             CCCChHHHHhcCC---CCchhhhhhhhhccccC
Q psy9377          75 EGGSLYNELQRSS---AASLKFCKIYLPFWFSS  104 (106)
Q Consensus        75 ~~g~l~~~l~~~~---~~~~~~~~~~~~qll~~  104 (106)
                      .++++.+++....   .........++.|++.+
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (384)
T COG0515          81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSA  113 (384)
T ss_pred             CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHH
Confidence            9999997777654   57788888888888765

>KOG1006|consensus

Probab=98.36  E-value=1.4e-07  Score=56.78  Aligned_cols=79  Identities=35%  Similarity=0.480  Sum_probs=60.9

Q ss_pred             ceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHh-cCCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           5 SKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLS-RVSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      +..||.|.||.|++..++  +..+|+|.|+.   ......++.|..... .-..|||+++++.. ..+..|+-||+|.- 
T Consensus        69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-  147 (361)
T KOG1006|consen   69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-  147 (361)
T ss_pred             HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence            457899999999998777  88999999863   244566777776544 45689999999887 56889999999954 


Q ss_pred             ChHHHHh
Q psy9377          78 SLYNELQ   84 (106)
Q Consensus        78 ~l~~~l~   84 (106)
                      |++.+-+
T Consensus       148 SlDklYk  154 (361)
T KOG1006|consen  148 SLDKLYK  154 (361)
T ss_pred             hHHHHHH
Confidence            7765443

>KOG1165|consensus

Probab=98.34  E-value=7.9e-07  Score=55.16  Aligned_cols=101  Identities=24%  Similarity=0.278  Sum_probs=68.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCC-CCceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      |.++++||+|+||.++.+...  +..+|+|.=+.......+.-|-...+.+. .++|...+-.-. +.+=.+|+|++ |.
T Consensus        30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GP  108 (449)
T KOG1165|consen   30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GP  108 (449)
T ss_pred             ceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-Cc
Confidence            788999999999999998754  88999986433223334445555566654 455554432112 34567899988 77


Q ss_pred             ChHHHHhcCC-CCchhhhhhhhhcccc
Q psy9377          78 SLYNELQRSS-AASLKFCKIYLPFWFS  103 (106)
Q Consensus        78 ~l~~~l~~~~-~~~~~~~~~~~~qll~  103 (106)
                      ||+++..-++ .++.+-+..++.|++.
T Consensus       109 SLEDLFD~CgR~FSvKTV~miA~Qmi~  135 (449)
T KOG1165|consen  109 SLEDLFDLCGRRFSVKTVAMIAKQMIT  135 (449)
T ss_pred             CHHHHHHHhcCcccHHhHHHHHHHHHH
Confidence            9998888754 5787777777777653

>KOG0195|consensus

Probab=98.32  E-value=6.2e-08  Score=58.61  Aligned_cols=85  Identities=28%  Similarity=0.554  Sum_probs=65.6

Q ss_pred             eeEeecCcceEEEEEECCceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCChH
Q psy9377           6 KIVGQGAFGVVWKGLWQNQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGSLY   80 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l~   80 (106)
                      .+|.+...|..|++++.+..++.|++.-    ....+.+..|...++..+|||++.+.+.|. ++.+.++..|++.|+|+
T Consensus       196 tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsly  275 (448)
T KOG0195|consen  196 TKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLY  275 (448)
T ss_pred             hhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHH
Confidence            4556667788888888865556666542    223467888888888999999999999994 57788999999999999


Q ss_pred             HHHhcCCCCc
Q psy9377          81 NELQRSSAAS   90 (106)
Q Consensus        81 ~~l~~~~~~~   90 (106)
                      ..++...+..
T Consensus       276 nvlhe~t~vv  285 (448)
T KOG0195|consen  276 NVLHEQTSVV  285 (448)
T ss_pred             HHHhcCccEE
Confidence            9998765433

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.22  E-value=1.6e-05  Score=46.73  Aligned_cols=78  Identities=13%  Similarity=0.111  Sum_probs=56.1

Q ss_pred             CCceeEeecCcceEEEEEECCceEEEEEecCHHH------HHHHHHHHHHHhcCCC-CceeeeeeeEecCceEEEEeecC
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAE------RKAFAVEVRQLSRVSH-PNIVKLYGACTGNPVCLVMEYAE   75 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~lv~e~~~   75 (106)
                      .+...|+++.||.|+.....+.++..+.+.....      ...+.+|+.++..+.| +++.++.++   +..+++|+|+.
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---~~~~lvmeyI~   81 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---DGRHLDRSYLA   81 (218)
T ss_pred             ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---cCEEEEEeeec
Confidence            3557899999999997655567776665542111      1246789999999964 677777664   45789999999


Q ss_pred             CCChHHHH
Q psy9377          76 GGSLYNEL   83 (106)
Q Consensus        76 ~g~l~~~l   83 (106)
                      |.+|.+.+
T Consensus        82 G~~L~~~~   89 (218)
T PRK12274         82 GAAMYQRP   89 (218)
T ss_pred             CccHHhhh
Confidence            98887554

>KOG0983|consensus

Probab=98.20  E-value=6.9e-07  Score=54.17  Aligned_cols=100  Identities=21%  Similarity=0.314  Sum_probs=68.7

Q ss_pred             CceeEeecCcceEEEEEEC--CceEEEEEecCHH---HHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---ERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      .+..+|+|+-|.|+++..+  +...++|......   ....++..+.++... ..|.|++++++| +...+++-||.+.-
T Consensus        96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~  175 (391)
T KOG0983|consen   96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST  175 (391)
T ss_pred             hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence            4567899999999999887  6889999886443   345566777665544 589999999999 56778888888743


Q ss_pred             CChHHHHhc-CCCCchhhhhhhhhccccC
Q psy9377          77 GSLYNELQR-SSAASLKFCKIYLPFWFSS  104 (106)
Q Consensus        77 g~l~~~l~~-~~~~~~~~~~~~~~qll~~  104 (106)
                       =++.++++ .+++++..+=.+.-.+++|
T Consensus       176 -C~ekLlkrik~piPE~ilGk~tva~v~A  203 (391)
T KOG0983|consen  176 -CAEKLLKRIKGPIPERILGKMTVAIVKA  203 (391)
T ss_pred             -HHHHHHHHhcCCchHHhhhhhHHHHHHH
Confidence             34444544 3456665544444333333

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.18  E-value=1.6e-05  Score=52.54  Aligned_cols=98  Identities=14%  Similarity=0.157  Sum_probs=60.2

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHH------------------------------------HHHH------HH
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA------------------------------------ERKA------FA   41 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~------------------------------------~~~~------~~   41 (106)
                      +.+|+|++|.||.+..+  |..+++|..++.-                                    ....      +.
T Consensus       125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~  204 (537)
T PRK04750        125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM  204 (537)
T ss_pred             hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence            57999999999999875  7899999886320                                    0011      12


Q ss_pred             HHHHHHhcC----CCCceeeeeeeEe--cCceEEEEeecCCCChHHH--HhcCC----CCchhhhhhhhhcccc
Q psy9377          42 VEVRQLSRV----SHPNIVKLYGACT--GNPVCLVMEYAEGGSLYNE--LQRSS----AASLKFCKIYLPFWFS  103 (106)
Q Consensus        42 ~~~~~~~~~----~~~~i~~~~~~~~--~~~~~lv~e~~~~g~l~~~--l~~~~----~~~~~~~~~~~~qll~  103 (106)
                      +|...+.++    .+.+.+.+..++.  .....++|||+.|+++.+.  +...+    .+.+..+..++.|++.
T Consensus       205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~  278 (537)
T PRK04750        205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFR  278 (537)
T ss_pred             HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence            233222222    2444444445552  3567899999999999764  33333    2444555667777653

>KOG1166|consensus

Probab=98.13  E-value=1.7e-06  Score=60.01  Aligned_cols=99  Identities=19%  Similarity=0.268  Sum_probs=66.1

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |.+.+.+|+|++|.||++... +..+|+|.-+++.     ....+...+.  ..+. +.+..+.+.+ ..+.-.++++|.
T Consensus       700 ~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk--~~~~-~~~~~~~~a~~~~~~S~lv~ey~  776 (974)
T KOG1166|consen  700 FCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK--PQML-PSIMHISSAHVFQNASVLVSEYS  776 (974)
T ss_pred             EEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc--hhhh-cchHHHHHHHccCCcceeeeecc
Confidence            456788999999999999876 7889999764321     1122222111  0000 1112222222 346677999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhcccc
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFS  103 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~  103 (106)
                      +.|+|.+++...+.+.+..+..+..|++.
T Consensus       777 ~~Gtlld~~N~~~~m~e~lv~~~~~qml~  805 (974)
T KOG1166|consen  777 PYGTLLDLINTNKVMDEYLVMFFSCQMLR  805 (974)
T ss_pred             ccccHHHhhccCCCCCchhhhHHHHHHHH
Confidence            99999999998888888888888888764

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.07  E-value=8.7e-06  Score=46.55  Aligned_cols=79  Identities=22%  Similarity=0.278  Sum_probs=60.2

Q ss_pred             CceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCChHHHH
Q psy9377           4 GSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNEL   83 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l~~~l   83 (106)
                      ..+.|++|.++.||.+.+++..+++|.-+....+..+..|..++..+...++.+  ..+.-+..++.|||..|.+|.++-
T Consensus        26 v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p--~vy~yg~~~i~me~i~G~~L~~~~  103 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTP--EVYFYGEDFIRMEYIDGRPLGKLE  103 (201)
T ss_pred             hhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCc--eEEEechhhhhhhhhcCcchhhhh
Confidence            456789999999999999988899998776667788889999888887655443  333334455669999988887665


Q ss_pred             h
Q psy9377          84 Q   84 (106)
Q Consensus        84 ~   84 (106)
                      .
T Consensus       104 ~  104 (201)
T COG2112         104 I  104 (201)
T ss_pred             h
Confidence            4

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.05  E-value=2.2e-05  Score=44.84  Aligned_cols=28  Identities=29%  Similarity=0.227  Sum_probs=24.6

Q ss_pred             ceeEeecCcceEEEEEEC-CceEEEEEec
Q psy9377           5 SKIVGQGAFGVVWKGLWQ-NQYVAVKHIE   32 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~-~~~~~~k~~~   32 (106)
                      .+.||+|++|.||.+... +..+++|.++
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~   30 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYR   30 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEe
Confidence            567999999999999877 8899999875

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0984|consensus

Probab=97.95  E-value=1.8e-05  Score=46.38  Aligned_cols=97  Identities=26%  Similarity=0.307  Sum_probs=68.1

Q ss_pred             ceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhc-CCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           5 SKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSR-VSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      +..||+|++|.+-+-++.  |...++|.+..+   ......++|+.+... ...|..+.+++.. +...+++-||.+.- 
T Consensus        51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-  129 (282)
T KOG0984|consen   51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-  129 (282)
T ss_pred             hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-
Confidence            457899999987655444  888999988632   344567778876544 5789999999877 56889999999955 


Q ss_pred             ChHHHHh----cCCCCchhhhhhhhhccc
Q psy9377          78 SLYNELQ----RSSAASLKFCKIYLPFWF  102 (106)
Q Consensus        78 ~l~~~l~----~~~~~~~~~~~~~~~qll  102 (106)
                      ||+.+-+    ..+..+++..=.+...+.
T Consensus       130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv  158 (282)
T KOG0984|consen  130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVV  158 (282)
T ss_pred             hHHHHHHHHHhcCCcCchHHhhHhHHHHH
Confidence            7765543    445666665544444433

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.94  E-value=0.0001  Score=47.85  Aligned_cols=27  Identities=22%  Similarity=0.230  Sum_probs=24.3

Q ss_pred             eeEeecCcceEEEEEEC-CceEEEEEec
Q psy9377           6 KIVGQGAFGVVWKGLWQ-NQYVAVKHIE   32 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~-~~~~~~k~~~   32 (106)
                      +.+|+|++|.||++..+ |..|++|..+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~r  150 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLR  150 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeC
Confidence            57999999999999887 8999999875

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.69  E-value=8e-05  Score=43.42  Aligned_cols=79  Identities=18%  Similarity=0.233  Sum_probs=54.9

Q ss_pred             ceeEeecCcceEEEEEECC-ceEEEEEecCHH---HHHHHHHHHHHHhcCCCC--ceeeeeeeEec----CceEEEEeec
Q psy9377           5 SKIVGQGAFGVVWKGLWQN-QYVAVKHIETEA---ERKAFAVEVRQLSRVSHP--NIVKLYGACTG----NPVCLVMEYA   74 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~-~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~----~~~~lv~e~~   74 (106)
                      .+.++.|..+.+|+....+ ..+++|......   .......|..++..+.+.  ++.++......    +..+++||++
T Consensus         3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i   82 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV   82 (223)
T ss_pred             ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence            3578899999999987664 788999875322   234567788888877543  34444444422    3568999999


Q ss_pred             CCCChHHHH
Q psy9377          75 EGGSLYNEL   83 (106)
Q Consensus        75 ~~g~l~~~l   83 (106)
                      +|.++.+.+
T Consensus        83 ~G~~l~~~~   91 (223)
T cd05154          83 DGRVLRDRL   91 (223)
T ss_pred             CCEecCCCC
Confidence            998887655

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.63  E-value=0.0017  Score=38.89  Aligned_cols=87  Identities=21%  Similarity=0.248  Sum_probs=57.7

Q ss_pred             ceeEe-ecCcceEEEEEECCceEEEEEecCH---------------HHHHHHHHHHHHHhcCCCCce--eeeeeeE--ec
Q psy9377           5 SKIVG-QGAFGVVWKGLWQNQYVAVKHIETE---------------AERKAFAVEVRQLSRVSHPNI--VKLYGAC--TG   64 (106)
Q Consensus         5 ~~~lg-~g~~~~v~~~~~~~~~~~~k~~~~~---------------~~~~~~~~~~~~~~~~~~~~i--~~~~~~~--~~   64 (106)
                      ...+| .|+.|.+|.....+..+++|.+...               .....+.+|..++..+.++++  ....+..  ..
T Consensus        36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            34677 7888899988777778888866421               112456778888888887664  4444443  12


Q ss_pred             C---ceEEEEeecCC-CChHHHHhcCCCCchh
Q psy9377          65 N---PVCLVMEYAEG-GSLYNELQRSSAASLK   92 (106)
Q Consensus        65 ~---~~~lv~e~~~~-g~l~~~l~~~~~~~~~   92 (106)
                      .   ..++++|+++| .+|.+++... ++++.
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~~  146 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQEA-PLSEE  146 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhcC-CCCHH
Confidence            2   24699999997 6898888653 34443

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.56  E-value=0.00031  Score=39.41  Aligned_cols=76  Identities=17%  Similarity=0.098  Sum_probs=50.1

Q ss_pred             ceeEeecCcceEEEEEECCceEEEEEecCHH-HHHHHHHHHHHHhcCCCCcee-eeeeeEecCceEEEEeecCCCChHH
Q psy9377           5 SKIVGQGAFGVVWKGLWQNQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIV-KLYGACTGNPVCLVMEYAEGGSLYN   81 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~lv~e~~~~g~l~~   81 (106)
                      .+.++.|..+.+|+....+..+++|...... .......|...+..+...+++ ++... .....+++||+++|.++.+
T Consensus         3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~-~~~~~~lv~e~i~G~~l~~   80 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYF-DPETGVLITEFIEGSELLT   80 (170)
T ss_pred             eeecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEE-eCCCCeEEEEecCCCcccc
Confidence            4678889999999988778889999875332 122345666666665443332 23322 3334579999999987764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1024|consensus

Probab=97.49  E-value=8.3e-05  Score=47.50  Aligned_cols=83  Identities=25%  Similarity=0.410  Sum_probs=58.2

Q ss_pred             CceeEeecCcceEEEEEECC-------ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE--ecCceEEEE
Q psy9377           4 GSKIVGQGAFGVVWKGLWQN-------QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC--TGNPVCLVM   71 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~-------~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~lv~   71 (106)
                      ....+-+|.||.||.+.++.       +.+-+|.++.   +-....++.|...+-.+.|||+.+..+++  ....+++++
T Consensus       288 l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y  367 (563)
T KOG1024|consen  288 LSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLY  367 (563)
T ss_pred             chhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEE
Confidence            34556789999999997762       1222222211   11233466677777788999999998887  457788999


Q ss_pred             eecCCCChHHHHhcC
Q psy9377          72 EYAEGGSLYNELQRS   86 (106)
Q Consensus        72 e~~~~g~l~~~l~~~   86 (106)
                      .+..-|+|..+++..
T Consensus       368 ~~~~~gNLK~FL~~C  382 (563)
T KOG1024|consen  368 PATGVGNLKSFLQIC  382 (563)
T ss_pred             eccCcchHHHHHHHh
Confidence            999889999999843

>KOG0665|consensus

Probab=97.41  E-value=2.9e-05  Score=47.99  Aligned_cols=97  Identities=25%  Similarity=0.260  Sum_probs=62.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |..++.++.|.- .|-.+.+.  ++.+++|....+    ...+...+|..++..+.|+|++++.+.+++       ...|
T Consensus        19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y   97 (369)
T KOG0665|consen   19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVY   97 (369)
T ss_pred             eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHH
Confidence            344455555554 34444443  566777654322    234567789999999999999999999943       3489


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccc
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWF  102 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll  102 (106)
                      +|||++.. +|.+.+.-  .+.....+.+..|.+
T Consensus        98 ~v~e~m~~-nl~~vi~~--elDH~tis~i~yq~~  128 (369)
T KOG0665|consen   98 LVMELMDA-NLCQVILM--ELDHETISYILYQML  128 (369)
T ss_pred             HHHHhhhh-HHHHHHHH--hcchHHHHHHHHHHH
Confidence            99999965 88888762  123334445555544

>KOG3741|consensus

Probab=97.08  E-value=0.0015  Score=43.34  Aligned_cols=92  Identities=14%  Similarity=0.153  Sum_probs=61.0

Q ss_pred             ceEEEEEEC--CceEEEEEecCHH--HHHHHHHHHHHHhcCCCCceeeeeeeEe-----cCceEEEEeecCC-CChHHHH
Q psy9377          14 GVVWKGLWQ--NQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKLYGACT-----GNPVCLVMEYAEG-GSLYNEL   83 (106)
Q Consensus        14 ~~v~~~~~~--~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~lv~e~~~~-g~l~~~l   83 (106)
                      .+-|++...  |..|++|.++...  .......-+..++++.|+|++++.+++.     +.++.+|++|.++ ++|.++-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            346777655  7889999884221  1122333456788999999999999883     3668999999875 5777655


Q ss_pred             hcC---------------CCCchhhhhhhhhccccCC
Q psy9377          84 QRS---------------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        84 ~~~---------------~~~~~~~~~~~~~qll~~~  105 (106)
                      -..               ...++.....|+-||..||
T Consensus       370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL  406 (655)
T KOG3741|consen  370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAAL  406 (655)
T ss_pred             ccCCccccccccccccCCCCchHHHHHHHHHHHHHHH
Confidence            322               1234556677777776654

>KOG1243|consensus

Probab=96.69  E-value=0.0021  Score=43.60  Aligned_cols=78  Identities=18%  Similarity=0.142  Sum_probs=55.3

Q ss_pred             CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhh
Q psy9377          23 NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLP   99 (106)
Q Consensus        23 ~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~   99 (106)
                      +.++.+...+..  ...+...+.+..++.++||+|+++.+.+ ..+..|+++|.+.  .|..++...+   ......-+.
T Consensus        37 ~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~---~~~v~~Gl~  111 (690)
T KOG1243|consen   37 GGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG---KEEVCLGLF  111 (690)
T ss_pred             CCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH---HHHHHHHHH
Confidence            555666555422  2234456677789999999999999888 4578999999885  5777887633   555566677


Q ss_pred             ccccCC
Q psy9377         100 FWFSSS  105 (106)
Q Consensus       100 qll~~~  105 (106)
                      ||+.||
T Consensus       112 qIl~AL  117 (690)
T KOG1243|consen  112 QILAAL  117 (690)
T ss_pred             HHHHHH
Confidence            777665

>KOG0590|consensus

Probab=96.57  E-value=0.00036  Score=47.02  Aligned_cols=104  Identities=23%  Similarity=0.317  Sum_probs=73.3

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEEecCHH----HHHHHHHHHHHHhcCC-CCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKHIETEA----ERKAFAVEVRQLSRVS-HPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |...+.+|+|+++.+......   ...++.+.+....    .......|..+-..+. |.|++...+... ....+++++
T Consensus        22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~  101 (601)
T KOG0590|consen   22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLS  101 (601)
T ss_pred             ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccC
Confidence            566778999999988766543   3455555554221    1222333444444444 999999988884 577889999


Q ss_pred             ecCCCChHHHH-hcCC-CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNEL-QRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l-~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +..|+++++.+ .... ..+.+.+..+..|+.+++
T Consensus       102 ~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l  136 (601)
T KOG0590|consen  102 YSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGL  136 (601)
T ss_pred             cccccccccccccCCccCCCCcchhhhhhhhccCc
Confidence            99999999999 5554 677888899999998876

>KOG0590|consensus

Probab=96.53  E-value=0.00072  Score=45.65  Aligned_cols=101  Identities=17%  Similarity=0.224  Sum_probs=65.0

Q ss_pred             CceeEeecCcceEEEEEEC--CceEEEEEec----CH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-CceEEEEe
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ--NQYVAVKHIE----TE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-NPVCLVME   72 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~----~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~lv~e   72 (106)
                      ....+|.|++|.++.....  ......+..+    +.    .....+..|..+-..+.|+|++.....+.. ....-.||
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            3467899999977765543  2222222111    11    111225556656667889998777665522 22223399


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||++ +|+..+.....++..++..++.||+.++
T Consensus       402 ~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv  433 (601)
T KOG0590|consen  402 YCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGV  433 (601)
T ss_pred             cccH-HHHHHHhcccccchhhhhHHHHHHHHHH
Confidence            9999 9999999876688888899999998664

>KOG1240|consensus

Probab=96.36  E-value=0.00012  Score=52.02  Aligned_cols=100  Identities=18%  Similarity=0.150  Sum_probs=69.4

Q ss_pred             CceeEeecCcceEEEEEECCceEEEEEecCHH---HHHH---HHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQNQYVAVKHIETEA---ERKA---FAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~---~~~~---~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      ..+.||++.|=++.++++++..+++|.+-...   ..+.   ...++. ...+++||.+++.-+- ...-.|++-+|..+
T Consensus        27 ~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh  105 (1431)
T KOG1240|consen   27 YVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVKH  105 (1431)
T ss_pred             eecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHhh
Confidence            34678999998888998886668888763221   1222   233344 5566899988875544 33557788888866


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                       +|++.+..+-=+..-+-+.++.|||.|+
T Consensus       106 -nLyDRlSTRPFL~~iEKkWiaFQLL~al  133 (1431)
T KOG1240|consen  106 -NLYDRLSTRPFLVLIEKKWIAFQLLKAL  133 (1431)
T ss_pred             -hhhhhhccchHHHHHHHHHHHHHHHHHH
Confidence             8999998754455566688999999886

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=96.35  E-value=0.087  Score=30.79  Aligned_cols=77  Identities=14%  Similarity=0.154  Sum_probs=52.8

Q ss_pred             ceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCC--ceeeeeeeE----ecCceEEEEeecCCCC
Q psy9377           5 SKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHP--NIVKLYGAC----TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~----~~~~~~lv~e~~~~g~   78 (106)
                      ++.++.|..+.+|.....+..+++|..........+.+|..++..+...  .+.++....    .....+++|++++|.+
T Consensus         2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~   81 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRP   81 (239)
T ss_dssp             EEEEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEE
T ss_pred             CccCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecccc
Confidence            4678999999999988877789999887654455666777766655322  233444322    1244799999999987


Q ss_pred             hHH
Q psy9377          79 LYN   81 (106)
Q Consensus        79 l~~   81 (106)
                      +..
T Consensus        82 ~~~   84 (239)
T PF01636_consen   82 LDD   84 (239)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            776

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.12  E-value=0.025  Score=37.86  Aligned_cols=27  Identities=19%  Similarity=0.257  Sum_probs=24.2

Q ss_pred             eeEeecCcceEEEEEEC-CceEEEEEec
Q psy9377           6 KIVGQGAFGVVWKGLWQ-NQYVAVKHIE   32 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~-~~~~~~k~~~   32 (106)
                      +.++.++.|.||.+..+ |+.|++|+.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqr  158 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQR  158 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecC
Confidence            57889999999999988 8999999875

>PRK10593 hypothetical protein; Provisional

Probab=96.07  E-value=0.048  Score=33.86  Aligned_cols=76  Identities=16%  Similarity=0.199  Sum_probs=49.9

Q ss_pred             ceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCC---CceeeeeeeEe----cCceEEEEeecCCC
Q psy9377           5 SKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH---PNIVKLYGACT----GNPVCLVMEYAEGG   77 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~----~~~~~lv~e~~~~g   77 (106)
                      .+.||.|..+.+|.....+..+.+|..+.......+..|...+..+..   ..+.++++.+.    .+..+++||+++|+
T Consensus        19 ~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~   98 (297)
T PRK10593         19 VECISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGV   98 (297)
T ss_pred             eeecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCE
Confidence            457899999999987665445666664331133466777777766532   34555555542    35689999999987


Q ss_pred             ChH
Q psy9377          78 SLY   80 (106)
Q Consensus        78 ~l~   80 (106)
                      ++.
T Consensus        99 ~~~  101 (297)
T PRK10593         99 SVE  101 (297)
T ss_pred             ecC
Confidence            664

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=95.79  E-value=0.092  Score=30.80  Aligned_cols=71  Identities=18%  Similarity=0.132  Sum_probs=43.3

Q ss_pred             eeEeecCcceEEEEEEC--------CceEEEEEecC--------------H----------H----HHHHHHHHHHHHhc
Q psy9377           6 KIVGQGAFGVVWKGLWQ--------NQYVAVKHIET--------------E----------A----ERKAFAVEVRQLSR   49 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--------~~~~~~k~~~~--------------~----------~----~~~~~~~~~~~~~~   49 (106)
                      ..||.|.=+.||.+...        +..+++|..+.              .          .    ...+..+|...+..
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            46788988999988643        25788886531              0          0    11234478877777


Q ss_pred             CCC--CceeeeeeeEecCceEEEEeecCCCCh
Q psy9377          50 VSH--PNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus        50 ~~~--~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      +..  .++..+..   ...-+++|||+.++++
T Consensus        83 l~~~Gv~vP~pi~---~~~~~lvME~Ig~~~~  111 (197)
T cd05146          83 MQKAGIPCPEVVV---LKKHVLVMSFIGDDQV  111 (197)
T ss_pred             HHHcCCCCCeEEE---ecCCEEEEEEcCCCCc
Confidence            643  23333332   2556799999976433

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG3087|consensus

Probab=95.52  E-value=0.12  Score=30.43  Aligned_cols=82  Identities=18%  Similarity=0.170  Sum_probs=51.3

Q ss_pred             ceeEeecCcceEEEEEECCceEEEEEecC-----H-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           5 SKIVGQGAFGVVWKGLWQNQYVAVKHIET-----E-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~-----~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      ...+.+|+=+.|+.+.+.|+...+|.-.+     +     -......+|...+..+....+....-++ +.+.-.+.|||
T Consensus        12 l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~   91 (229)
T KOG3087|consen   12 LELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF   91 (229)
T ss_pred             ceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence            45677888888888888887777764321     1     1234566777777765433333222222 45667799999


Q ss_pred             cCC-CChHHHHhcC
Q psy9377          74 AEG-GSLYNELQRS   86 (106)
Q Consensus        74 ~~~-g~l~~~l~~~   86 (106)
                      .+| .++.+++...
T Consensus        92 ~~g~~~vk~~i~~~  105 (229)
T KOG3087|consen   92 IDGASTVKDFILST  105 (229)
T ss_pred             ccchhHHHHHHHHH
Confidence            977 4677777653

>KOG0603|consensus

Probab=95.23  E-value=0.00064  Score=45.40  Aligned_cols=98  Identities=24%  Similarity=0.333  Sum_probs=64.5

Q ss_pred             eEeecCcceEEEEE-----ECCceEEEEEecCHH----HHHHHHHHHHHHhcCC-CCceeeeeeeE-ecCceEEEEeecC
Q psy9377           7 IVGQGAFGVVWKGL-----WQNQYVAVKHIETEA----ERKAFAVEVRQLSRVS-HPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         7 ~lg~g~~~~v~~~~-----~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      ++|+|.+|.|..+.     +.+..+++|..+...    ....-..|..++...+ +|.++++.-.+ +....++++++..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            36889999887542     225556666553211    1112223444555555 89999998877 5578999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSS  104 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~  104 (106)
                      ||++...+.....+.+...+.+...++.|
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLa  109 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALA  109 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHH
Confidence            99999988877666666666665554443

>KOG1266|consensus

Probab=95.05  E-value=0.005  Score=38.97  Aligned_cols=59  Identities=31%  Similarity=0.312  Sum_probs=45.1

Q ss_pred             hcCCCCceeeeeeeEec------CceEEEEeecCCCChHHHHhcC----CCCchhhhhhhhhccccCCC
Q psy9377          48 SRVSHPNIVKLYGACTG------NPVCLVMEYAEGGSLYNELQRS----SAASLKFCKIYLPFWFSSSS  106 (106)
Q Consensus        48 ~~~~~~~i~~~~~~~~~------~~~~lv~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~qll~~~~  106 (106)
                      ..+-|.|+++++.++++      ....++.||+..|++..+|++-    ..+....-+.|+.|+++||+
T Consensus       122 lqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~  190 (458)
T KOG1266|consen  122 LQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALS  190 (458)
T ss_pred             HHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh
Confidence            34568889998887732      4478899999999999999852    23555555899999999974

>KOG1023|consensus

Probab=94.94  E-value=0.026  Score=37.45  Aligned_cols=38  Identities=32%  Similarity=0.565  Sum_probs=33.7

Q ss_pred             hcCCCCceeeeeeeE-ecCceEEEEeecCCCChHHHHhc
Q psy9377          48 SRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQR   85 (106)
Q Consensus        48 ~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l~~~l~~   85 (106)
                      +.+.|.|+.++.+.+ .++..+++.+||..|+|.+.+..
T Consensus         2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~   40 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN   40 (484)
T ss_pred             cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc
Confidence            467899999999998 56788999999999999999987

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.65  E-value=0.02  Score=30.72  Aligned_cols=28  Identities=18%  Similarity=0.187  Sum_probs=24.4

Q ss_pred             eeEeecCcceEEEEEEC-CceEEEEEecC
Q psy9377           6 KIVGQGAFGVVWKGLWQ-NQYVAVKHIET   33 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~-~~~~~~k~~~~   33 (106)
                      +.++.|+.|.||++..+ |..+++|..++
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP   45 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQRP   45 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcch
Confidence            57899999999999887 89999998753

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG1235|consensus

Probab=94.45  E-value=0.23  Score=33.64  Aligned_cols=27  Identities=19%  Similarity=0.214  Sum_probs=23.1

Q ss_pred             eeEeecCcceEEEEEEC-CceEEEEEec
Q psy9377           6 KIVGQGAFGVVWKGLWQ-NQYVAVKHIE   32 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~-~~~~~~k~~~   32 (106)
                      +.|+..+.+.|+++..+ |..+++|.-+
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~  194 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQH  194 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecC
Confidence            56889999999999888 7889999764

>KOG0601|consensus

Probab=94.36  E-value=0.038  Score=36.95  Aligned_cols=104  Identities=18%  Similarity=0.074  Sum_probs=62.3

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEEecCH----HHHHHHHHHHHHHhcC-CCCceeeeeeeEec-CceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKHIETE----AERKAFAVEVRQLSRV-SHPNIVKLYGACTG-NPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~----~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~~lv~e   72 (106)
                      |..+..||.+.|+.++....+   +..|++|.....    .....-..|+.+...+ .|.+.+.....|.+ ...++--|
T Consensus       267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e  346 (524)
T KOG0601|consen  267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLE  346 (524)
T ss_pred             cceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchh
Confidence            456678899999998876544   567777765311    1111112233333333 46666665555533 55668889


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+.+++....+.-...+.++.....+.|++.++
T Consensus       347 ~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l  379 (524)
T KOG0601|consen  347 FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL  379 (524)
T ss_pred             hhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence            999988876664334455566666777766554

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=93.33  E-value=0.5  Score=27.83  Aligned_cols=80  Identities=21%  Similarity=0.245  Sum_probs=49.2

Q ss_pred             eEeecCcceEEEEEECCceEEEEEe-cC----H-----HHHHHHHHHHHHHhcCCCCceeeeeee-EecCceEEEEeecC
Q psy9377           7 IVGQGAFGVVWKGLWQNQYVAVKHI-ET----E-----AERKAFAVEVRQLSRVSHPNIVKLYGA-CTGNPVCLVMEYAE   75 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~~~~~~~k~~-~~----~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~lv~e~~~   75 (106)
                      .+++|+=+.++...+.+..+.+|.= ++    +     -......+|..++..+....+....-. ++++...++|||.+
T Consensus         3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~   82 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE   82 (204)
T ss_pred             hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence            4567777778877666655555532 11    1     123455678888777654333222211 25667789999999


Q ss_pred             CCChHHHHhcC
Q psy9377          76 GGSLYNELQRS   86 (106)
Q Consensus        76 ~g~l~~~l~~~   86 (106)
                      |..|-+.+...
T Consensus        83 G~~lkd~l~~~   93 (204)
T COG3642          83 GELLKDALEEA   93 (204)
T ss_pred             ChhHHHHHHhc
Confidence            98888788764

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=93.11  E-value=0.4  Score=28.65  Aligned_cols=71  Identities=14%  Similarity=0.188  Sum_probs=45.2

Q ss_pred             eeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCCc--eeeeeeeEe-cCceEEEEeecCCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPN--IVKLYGACT-GNPVCLVMEYAEGGS   78 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~-~~~~~lv~e~~~~g~   78 (106)
                      ..+|+|..+.+|+.  .+..+++|..+.........+|...+..+....  +.+...... .+...++|++++|.+
T Consensus         7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTH--KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             eeecCCCCcceeEe--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            57899999999974  244567777654333445677777776654322  234444442 345678999998863

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PLN02876 acyl-CoA dehydrogenase

Probab=92.39  E-value=1.4  Score=31.62  Aligned_cols=74  Identities=22%  Similarity=0.311  Sum_probs=46.9

Q ss_pred             ceeEeecCcceEEEEEECC----ceEEEEEecCH---HHHHHHHHHHHHHhcCC-CCce--eeeeeeEec----CceEEE
Q psy9377           5 SKIVGQGAFGVVWKGLWQN----QYVAVKHIETE---AERKAFAVEVRQLSRVS-HPNI--VKLYGACTG----NPVCLV   70 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~----~~~~~k~~~~~---~~~~~~~~~~~~~~~~~-~~~i--~~~~~~~~~----~~~~lv   70 (106)
                      .+.++.|.....|.....+    ..++++.....   .....+.+|..++..+. ++++  .+++..+.+    +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            4557778777888765542    35666655321   12345778888888774 4443  555555532    468999


Q ss_pred             EeecCCCC
Q psy9377          71 MEYAEGGS   78 (106)
Q Consensus        71 ~e~~~~g~   78 (106)
                      ||+++|..
T Consensus       123 ME~v~G~~  130 (822)
T PLN02876        123 MEYLEGRI  130 (822)
T ss_pred             EEecCCcc
Confidence            99998754

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=92.29  E-value=1.3  Score=26.54  Aligned_cols=75  Identities=12%  Similarity=0.057  Sum_probs=43.2

Q ss_pred             eEeecCc-ceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCC-CCceeeeeeeEe-cCceEEEEeecCCCChHHH
Q psy9377           7 IVGQGAF-GVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGACT-GNPVCLVMEYAEGGSLYNE   82 (106)
Q Consensus         7 ~lg~g~~-~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~~lv~e~~~~g~l~~~   82 (106)
                      .|..|.. ..||+....+..+.+|...... .....+|+.++..+. +..+.++..... .+..+++|++.+|.++.+.
T Consensus         5 ~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150           5 RVTEGQSGATVYRLDGKNPGLYLKIAPSGP-TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             ecCCCCCcCeEEEEcCCCCcEEEEecCCCc-ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            3445555 5678765545667777765321 223455666665553 222334444332 3467899999998777643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0601|consensus

Probab=91.42  E-value=0.2  Score=33.73  Aligned_cols=100  Identities=22%  Similarity=0.147  Sum_probs=64.0

Q ss_pred             CCceeEee--cCcceEEEEEE--C--CceEEEEEec--C--HHHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEE
Q psy9377           3 GGSKIVGQ--GAFGVVWKGLW--Q--NQYVAVKHIE--T--EAERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         3 ~~~~~lg~--g~~~~v~~~~~--~--~~~~~~k~~~--~--~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      .+.+.+|.  |.++.+|.+..  +  +..+++|.-+  .  +.....-.++......+ .|++.++....+ ..+..++-
T Consensus       117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq  196 (524)
T KOG0601|consen  117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ  196 (524)
T ss_pred             ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence            34566788  99999998765  3  5667776532  1  11122223344434444 478888866666 45788999


Q ss_pred             EeecCCCChHHHHhcCCC-Cchhhhhhhhhcccc
Q psy9377          71 MEYAEGGSLYNELQRSSA-ASLKFCKIYLPFWFS  103 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~qll~  103 (106)
                      +|++. .++..+.....+ +++...+....+++.
T Consensus       197 tE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~  229 (524)
T KOG0601|consen  197 TELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLS  229 (524)
T ss_pred             ecccc-chhHHhhhcccccCCchhhhhHHhhhhh
Confidence            99885 588888876444 667777777766665

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=91.37  E-value=1.1  Score=28.04  Aligned_cols=76  Identities=29%  Similarity=0.295  Sum_probs=52.0

Q ss_pred             CCceeEeecCcceEEEEEEC-CceEEEEEecC---------------------H---HHHHHHHHHHHHHhcCCCC--ce
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIET---------------------E---AERKAFAVEVRQLSRVSHP--NI   55 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~---------------------~---~~~~~~~~~~~~~~~~~~~--~i   55 (106)
                      .++..||-|.=+.||.+.+. +.++++|.-+.                     .   -.+..+.+|..+|..+...  .+
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            46688999999999999887 88888885420                     0   0234567788888887543  33


Q ss_pred             eeeeeeEecCceEEEEeecCCCChHH
Q psy9377          56 VKLYGACTGNPVCLVMEYAEGGSLYN   81 (106)
Q Consensus        56 ~~~~~~~~~~~~~lv~e~~~~g~l~~   81 (106)
                      .+..   .-+.-.++||+.+|-.|..
T Consensus       174 P~P~---~~nRHaVvMe~ieG~eL~~  196 (304)
T COG0478         174 PKPI---AWNRHAVVMEYIEGVELYR  196 (304)
T ss_pred             CCcc---ccccceeeeehcccceeec
Confidence            3322   3356779999998866543

>KOG4158|consensus

Probab=90.48  E-value=0.16  Score=33.39  Aligned_cols=54  Identities=24%  Similarity=0.302  Sum_probs=39.3

Q ss_pred             CCCCceeeeeeeEe----------------------------cCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhcc
Q psy9377          50 VSHPNIVKLYGACT----------------------------GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFW  101 (106)
Q Consensus        50 ~~~~~i~~~~~~~~----------------------------~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~ql  101 (106)
                      .+||||+++...|.                            +.+.|+||...+. +|.+|+-.+. .+....+.++.|+
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-~s~r~~~~~laQl  350 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-RSYRTGRVILAQL  350 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-CchHHHHHHHHHH
Confidence            46999998876540                            1248899988866 8999998755 3455567788888


Q ss_pred             ccCC
Q psy9377         102 FSSS  105 (106)
Q Consensus       102 l~~~  105 (106)
                      |+|+
T Consensus       351 LEav  354 (598)
T KOG4158|consen  351 LEAV  354 (598)
T ss_pred             HHHH
Confidence            8875

>KOG2270|consensus

Probab=89.25  E-value=2.9  Score=27.75  Aligned_cols=68  Identities=22%  Similarity=0.206  Sum_probs=40.2

Q ss_pred             eEeecCcceEEEEEEC-CceEEEEEecC---------------------------HH-HHHHHHHHHHHHhcCCCCceee
Q psy9377           7 IVGQGAFGVVWKGLWQ-NQYVAVKHIET---------------------------EA-ERKAFAVEVRQLSRVSHPNIVK   57 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~-~~~~~~k~~~~---------------------------~~-~~~~~~~~~~~~~~~~~~~i~~   57 (106)
                      .|..|.=+.||.+... |..+++|+.+.                           .. ...+...|.+-+.++....|..
T Consensus       151 CiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~  230 (520)
T KOG2270|consen  151 CISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPC  230 (520)
T ss_pred             ccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            4667778889998766 77889987631                           01 1234556776677665544222


Q ss_pred             eeeeEecCceEEEEeecC
Q psy9377          58 LYGACTGNPVCLVMEYAE   75 (106)
Q Consensus        58 ~~~~~~~~~~~lv~e~~~   75 (106)
                      .--+...++ .+||+|+.
T Consensus       231 PePIlLk~h-VLVM~FlG  247 (520)
T KOG2270|consen  231 PEPILLKNH-VLVMEFLG  247 (520)
T ss_pred             CCceeeecc-eEeeeecc
Confidence            111112233 48999985

>PLN00181 protein SPA1-RELATED; Provisional

Probab=89.08  E-value=0.05  Score=38.18  Aligned_cols=39  Identities=13%  Similarity=0.026  Sum_probs=30.9

Q ss_pred             ceEEEEeecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          66 PVCLVMEYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        66 ~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ....++|++ +++|.+++... ..++...+..++.|++.||
T Consensus        54 ~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al   93 (793)
T PLN00181         54 SIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIV   93 (793)
T ss_pred             hhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHH
Confidence            456677877 55999999753 4578889999999999876

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=88.37  E-value=1.6  Score=27.34  Aligned_cols=72  Identities=19%  Similarity=0.177  Sum_probs=37.8

Q ss_pred             ceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcC---CCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           5 SKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRV---SHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      .+.++-|.....|.....+..+.+|.-. ......+..|..-++.+   ....+.+.+.+. ..+..++++||++.+
T Consensus        22 ~~~v~GG~i~~a~~~~~~~~~~FvK~~~-~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   22 IEPVSGGDINEAYRLDTDGGSYFVKVNS-ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             EEEE--SSSSEEEEEETTS-EEEEEEEE-GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             eEecCCCChhheEEEECCCccEEEEecC-hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence            3567778888888766557788888775 22233445555555554   233344555544 245569999998765

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.22  E-value=2.8  Score=25.89  Aligned_cols=64  Identities=20%  Similarity=0.262  Sum_probs=36.0

Q ss_pred             EEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE----ecCceEEEEeecCCCChH
Q psy9377          16 VWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC----TGNPVCLVMEYAEGGSLY   80 (106)
Q Consensus        16 v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~lv~e~~~~g~l~   80 (106)
                      .|...+....+.+|+-. ....+.+..|+.-+..+...|-+....++    ..++.++|++|++-|.+.
T Consensus        32 a~~v~dg~~~~FvK~n~-~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          32 AWRLRDGTDPFFVKCNQ-REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             eeEeecCCcceEEEecc-hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            34333334566666542 23345566676666655444433333322    457899999999865553

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=84.55  E-value=6.3  Score=23.30  Aligned_cols=83  Identities=17%  Similarity=0.246  Sum_probs=50.7

Q ss_pred             CceeEeecCcceEEEEEECCceEEEEEecCHH------------------HHHHHHHHHHHHhcC------CCCceeeee
Q psy9377           4 GSKIVGQGAFGVVWKGLWQNQYVAVKHIETEA------------------ERKAFAVEVRQLSRV------SHPNIVKLY   59 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~------------------~~~~~~~~~~~~~~~------~~~~i~~~~   59 (106)
                      ....+|+|+.-.||.... +...++|......                  ......+|+.....+      .+.++.+++
T Consensus         5 ~~~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQHPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             CCcccccCCCceEEECCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            456789999988887543 3345666554221                  123444555544333      367788888


Q ss_pred             eeEec-CceEEEEeecC------CCChHHHHhcCC
Q psy9377          60 GACTG-NPVCLVMEYAE------GGSLYNELQRSS   87 (106)
Q Consensus        60 ~~~~~-~~~~lv~e~~~------~g~l~~~l~~~~   87 (106)
                      ++..+ .-.-+++|...      ..+|.++++...
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~  118 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG  118 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC
Confidence            88844 44678887753      347888886543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=84.18  E-value=7.8  Score=24.04  Aligned_cols=88  Identities=9%  Similarity=-0.047  Sum_probs=46.0

Q ss_pred             ceEEEEEECCceEEEEEecCHHH---H----------HHHHHHHHHHhcCC-----CCceeeeeeeEe---cCceEEEEe
Q psy9377          14 GVVWKGLWQNQYVAVKHIETEAE---R----------KAFAVEVRQLSRVS-----HPNIVKLYGACT---GNPVCLVME   72 (106)
Q Consensus        14 ~~v~~~~~~~~~~~~k~~~~~~~---~----------~~~~~~~~~~~~~~-----~~~i~~~~~~~~---~~~~~lv~e   72 (106)
                      ..|.+....|..+.+|.......   .          ..+.+|...+..+.     -|.++-....-.   ....++|+|
T Consensus        36 rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         36 RRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             ceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence            33445555577788886532110   1          13556766665542     233322211111   234789999


Q ss_pred             ecCCC-ChHHHHhc--CCCCchhhhhhhhhcc
Q psy9377          73 YAEGG-SLYNELQR--SSAASLKFCKIYLPFW  101 (106)
Q Consensus        73 ~~~~g-~l~~~l~~--~~~~~~~~~~~~~~ql  101 (106)
                      ++++. +|.+++..  ...........++.++
T Consensus       116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~l  147 (268)
T PRK15123        116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRV  147 (268)
T ss_pred             eCCCCccHHHHHHhhcccCCCHHHHHHHHHHH
Confidence            99875 78888863  2223334444555544

>KOG1035|consensus

Probab=82.45  E-value=0.35  Score=35.80  Aligned_cols=40  Identities=15%  Similarity=0.081  Sum_probs=31.3

Q ss_pred             ceEEEEeecCCCChHHHHhcCCCC-chhhhhhhhhccccCC
Q psy9377          66 PVCLVMEYAEGGSLYNELQRSSAA-SLKFCKIYLPFWFSSS  105 (106)
Q Consensus        66 ~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~qll~~~  105 (106)
                      .+||.||||+...+.++++++... ..+.+..+.++|+.|+
T Consensus       670 ~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGL  710 (1351)
T KOG1035|consen  670 ILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGL  710 (1351)
T ss_pred             EEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHH
Confidence            479999999997888888776543 3567788899998875

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=82.36  E-value=12  Score=24.81  Aligned_cols=80  Identities=20%  Similarity=0.201  Sum_probs=47.4

Q ss_pred             ceeEeecCcceEEEEEEC-C-ceEEEEEecC------H---HHHHHHHHHHHHHhcCC---CCceeeeeeeEecCceEEE
Q psy9377           5 SKIVGQGAFGVVWKGLWQ-N-QYVAVKHIET------E---AERKAFAVEVRQLSRVS---HPNIVKLYGACTGNPVCLV   70 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~-~-~~~~~k~~~~------~---~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~lv   70 (106)
                      .+.+|.|.+..||+.... + ..+.+|.-.+      .   ........|...+..+.   ...+.+++. ++....+++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~-~D~~~~~lV  109 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYH-YDEELAVTV  109 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEE-ECCCCCEEE
Confidence            357888999999998776 4 4788887431      1   12334455666666542   122333332 244557899


Q ss_pred             EeecCCCC-hHHHHhc
Q psy9377          71 MEYAEGGS-LYNELQR   85 (106)
Q Consensus        71 ~e~~~~g~-l~~~l~~   85 (106)
                      ||++++.. +.+.+..
T Consensus       110 ME~L~~~~~lr~~Ll~  125 (401)
T PRK09550        110 MEDLSDHKILRKGLID  125 (401)
T ss_pred             EecCCCccHHHHHHhc
Confidence            99997644 4444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	106
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		7e-28
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		7e-28
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-10
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-10
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-10
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		8e-10
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		8e-10
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-09
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		2e-09
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-09
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-09
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		3e-09
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		3e-09
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		4e-09
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		5e-09
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		7e-09
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		8e-09
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		8e-09
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		8e-09
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		8e-09
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		8e-09
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		8e-09
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		9e-09
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-08
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-08
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-08
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-08
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		5e-08
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		5e-08
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		5e-08
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		5e-08
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-08
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		5e-08
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		5e-08
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		5e-08
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		6e-08
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		6e-08
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		6e-08
2pl0_A	289	Lck Bound To Imatinib Length = 289		6e-08
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		6e-08
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		6e-08
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		6e-08
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		6e-08
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		6e-08
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		6e-08
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		8e-08
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-08
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		8e-08
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		8e-08
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-08
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		8e-08
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-08
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		8e-08
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		8e-08
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		8e-08
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		9e-08
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		9e-08
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		9e-08
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-08
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		9e-08
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		9e-08
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-08
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-07
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-07
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-07
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		1e-07
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-07
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-07
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-07
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-07
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		1e-07
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-07
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-07
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-07
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-07
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-07
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-07
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-07
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-07
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-07
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-07
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-07
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		2e-07
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-07
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		2e-07
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		2e-07
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-07
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-07
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-07
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-07
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-07
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-07
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-07
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		2e-07
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-07
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-07
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		3e-07
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		3e-07
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		3e-07
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		3e-07
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		3e-07
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		3e-07
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		3e-07
4h58_A	275	Braf In Complex With Compound 3 Length = 275		3e-07
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		3e-07
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		4e-07
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		4e-07
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		4e-07
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		4e-07
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		4e-07
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		4e-07
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		4e-07
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		6e-07
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		7e-07
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		7e-07
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		7e-07
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		7e-07
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		7e-07
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		8e-07
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-07
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		8e-07
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		9e-07
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		9e-07
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-06
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-06
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-06
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-06
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		1e-06
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		1e-06
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		2e-06
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-06
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-06
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		2e-06
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-06
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-06
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-06
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-06
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-06
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		2e-06
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		3e-06
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-06
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		3e-06
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		3e-06
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		3e-06
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		3e-06
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		3e-06
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-06
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-06
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		3e-06
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		3e-06
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		3e-06
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		3e-06
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		3e-06
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		3e-06
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		3e-06
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		3e-06
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-06
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		4e-06
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		4e-06
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		4e-06
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		4e-06
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		4e-06
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-06
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		4e-06
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		5e-06
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		5e-06
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		5e-06
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		5e-06
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		6e-06
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-06
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		6e-06
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		6e-06
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		6e-06
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		6e-06
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		6e-06
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		6e-06
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-06
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		6e-06
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		6e-06
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		6e-06
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-06
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		7e-06
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		7e-06
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-06
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		8e-06
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-05
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-05
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		1e-05
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-05
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-05
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		1e-05
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		1e-05
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-05
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-05
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-05
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-05
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		2e-05
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-05
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		2e-05
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-05
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		2e-05
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		2e-05
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		2e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-05
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-05
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-05
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-05
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-05
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		2e-05
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-05
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		3e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-05
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-05
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-05
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-05
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-05
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		4e-05
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		4e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		4e-05
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		4e-05
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-05
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		5e-05
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		5e-05
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		5e-05
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		5e-05
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		5e-05
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		5e-05
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-05
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		5e-05
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		5e-05
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		5e-05
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		5e-05
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		5e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		5e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		6e-05
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		6e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		6e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		6e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		6e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		6e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		6e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		6e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		6e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		6e-05
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		6e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		6e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		6e-05
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-05
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		7e-05
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-05
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		7e-05
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		7e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-05
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		7e-05
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		7e-05
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		8e-05
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		8e-05
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		9e-05
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		9e-05
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		9e-05
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		9e-05
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		9e-05
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		9e-05
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		9e-05
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		9e-05
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-04
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		1e-04
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-04
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-04
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-04
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-04
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		1e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		1e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		1e-04
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		1e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		1e-04
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		1e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		1e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		1e-04
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-04
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-04
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		1e-04
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		1e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		1e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		1e-04
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		1e-04
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		1e-04
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		1e-04
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		1e-04
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		1e-04
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		1e-04
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-04
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-04
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-04
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-04
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-04
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-04
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-04
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-04
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-04
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		1e-04
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		1e-04
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		1e-04
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-04
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-04
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		1e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-04
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		1e-04
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-04
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-04
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-04
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-04
1fvr_A	327	Tie2 Kinase Domain Length = 327		2e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-04
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-04
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		2e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		2e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-04
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-04
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-04
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		3e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		3e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		3e-04
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		3e-04
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		3e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		3e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		3e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		3e-04
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		3e-04
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		3e-04
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		3e-04
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		3e-04
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		4e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		4e-04
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		4e-04
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		4e-04
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		4e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		4e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-04
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		4e-04
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-04
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		4e-04
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		4e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-04
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		5e-04
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		5e-04
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		5e-04
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-04
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-04
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-04
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		5e-04
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		5e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		5e-04
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		5e-04
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		6e-04
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		6e-04
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		6e-04
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		6e-04
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		6e-04
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		6e-04
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		6e-04
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		6e-04
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		6e-04
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		6e-04
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		6e-04
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		6e-04
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		6e-04
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		6e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		6e-04
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		6e-04
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		6e-04
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		6e-04
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		6e-04
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		6e-04
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		6e-04
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		6e-04
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		6e-04
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		6e-04
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		6e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		7e-04
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		7e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		7e-04
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		7e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		7e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		7e-04
3g51_A	325	Structural Diversity Of The Active Conformation Of		8e-04
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		8e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		9e-04

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score =  118 bits (296), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct: 14 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 72
Query: 66 PVCLVMEYAEGGSLYNELQ 84
          PVCLVMEYAEGGSLYN L 
Sbjct: 73 PVCLVMEYAEGGSLYNVLH 91

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score =  118 bits (296), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct: 15 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 73
Query: 66 PVCLVMEYAEGGSLYNELQ 84
          PVCLVMEYAEGGSLYN L 
Sbjct: 74 PVCLVMEYAEGGSLYNVLH 92

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 2   LGGSKIVGQGAFGVVWKGLWQNQYVAVK------HIETEAERKAFAVEVRQLSRVSHPNI 55
           +GG+K+ G+G FGVV+KG   N  VAVK       I TE  ++ F  E++ +++  H N+
Sbjct: 34  VGGNKM-GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92
Query: 56  VKLYG-ACTGNPVCLVMEYAEGGSLYNEL 83
           V+L G +  G+ +CLV  Y   GSL + L
Sbjct: 93  VELLGFSSDGDDLCLVYVYMPNGSLLDRL 121

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 2   LGGSKIVGQGAFGVVWKGLWQNQYVAVK------HIETEAERKAFAVEVRQLSRVSHPNI 55
           +GG+K+ G+G FGVV+KG   N  VAVK       I TE  ++ F  E++ +++  H N+
Sbjct: 34  VGGNKM-GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92
Query: 56  VKLYG-ACTGNPVCLVMEYAEGGSLYNEL 83
           V+L G +  G+ +CLV  Y   GSL + L
Sbjct: 93  VELLGFSSDGDDLCLVYVYMPNGSLLDRL 121

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 2   LGGSKIVGQGAFGVVWKGLWQNQYVAVK------HIETEAERKAFAVEVRQLSRVSHPNI 55
           +GG+K+ G+G FGVV+KG   N  VAVK       I TE  ++ F  E++ +++  H N+
Sbjct: 28  VGGNKM-GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 86
Query: 56  VKLYG-ACTGNPVCLVMEYAEGGSLYNEL 83
           V+L G +  G+ +CLV  Y   GSL + L
Sbjct: 87  VELLGFSSDGDDLCLVYVYMPNGSLLDRL 115

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 2   LGGSKIVGQGAFGVVWKGLWQNQYVAVK------HIETEAERKAFAVEVRQLSRVSHPNI 55
           +GG+K  G+G FGVV+KG   N  VAVK       I TE  ++ F  E++  ++  H N+
Sbjct: 25  VGGNK-XGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENL 83
Query: 56  VKLYG-ACTGNPVCLVMEYAEGGSLYNEL 83
           V+L G +  G+ +CLV  Y   GSL + L
Sbjct: 84  VELLGFSSDGDDLCLVYVYXPNGSLLDRL 112

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 6  KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          K +G G FGVV  G W+ QY VAVK I E       F  E + + ++SHP +VK YG C+
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 64 GN-PVCLVMEYAEGGSLYNELQ 84
             P+ +V EY   G L N L+
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLR 95

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 8   VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG+V  G W N+  VA+K I E       F  E   + ++SHP +V+LYG C   
Sbjct: 35  IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 66  -PVCLVMEYAEGGSLYNELQ 84
            P+CLV E+ E G L + L+
Sbjct: 95  APICLVFEFMEHGCLSDYLR 114

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 8  VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          +G G FG+V  G W N+  VA+K I E     + F  E   + ++SHP +V+LYG C   
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 66 -PVCLVMEYAEGGSLYNELQ 84
           P+CLV E+ E G L + L+
Sbjct: 75 APICLVFEFMEHGCLSDYLR 94

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 8  VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          +G G FG+V  G W N+  VA+K I E     + F  E   + ++SHP +V+LYG C   
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 66 -PVCLVMEYAEGGSLYNELQ 84
           P+CLV E+ E G L + L+
Sbjct: 73 APICLVFEFMEHGCLSDYLR 92

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 8  VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          +G G FG+V  G W N+  VA+K I E     + F  E   + ++SHP +V+LYG C   
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 66 -PVCLVMEYAEGGSLYNELQ 84
           P+CLV E+ E G L + L+
Sbjct: 75 APICLVFEFMEHGCLSDYLR 94

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 8  VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          +G G FG+V  G W N+  VA+K I E     + F  E   + ++SHP +V+LYG C   
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 66 -PVCLVMEYAEGGSLYNELQ 84
           P+CLV E+ E G L + L+
Sbjct: 78 APICLVFEFMEHGCLSDYLR 97

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 8  VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          +G G FG+V  G W N+  VA+K I E     + F  E   + ++SHP +V+LYG C   
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 66 -PVCLVMEYAEGGSLYNELQ 84
           P+CLV E+ E G L + L+
Sbjct: 76 APICLVTEFMEHGCLSDYLR 95

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHI---ETEAER-KAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G G+FG V +  W    VAVK +   +  AER   F  EV  + R+ HPNIV   GA T
Sbjct: 45  IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 64  GNP-VCLVMEYAEGGSLYNELQRSSA 88
             P + +V EY   GSLY  L +S A
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGA 130

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHI---ETEAER-KAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G G+FG V +  W    VAVK +   +  AER   F  EV  + R+ HPNIV   GA T
Sbjct: 45  IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 64  GNP-VCLVMEYAEGGSLYNELQRSSA 88
             P + +V EY   GSLY  L +S A
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGA 130

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAV------EVRQLSRVSHPNIVKLY 59
          +I+G G FG V++  W    VAVK    + +            E +  + + HPNI+ L 
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 60 GACTGNP-VCLVMEYAEGGSL 79
          G C   P +CLVME+A GG L
Sbjct: 73 GVCLKEPNLCLVMEFARGGPL 93

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FGVV  G W+ QY VA+K I E       F  E + +  +SH  +V+LYG CT
Sbjct: 14  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 64  GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
              P+ ++ EY   G L N L+       +   L+ CK
Sbjct: 74  KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 111

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FGVV  G W+ QY VA+K I E       F  E + +  +SH  +V+LYG CT
Sbjct: 15  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 64  GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
              P+ ++ EY   G L N L+       +   L+ CK
Sbjct: 75  KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 112

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FGVV  G W+ QY VA+K I E       F  E + +  +SH  +V+LYG CT
Sbjct: 10  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 64  GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
              P+ ++ EY   G L N L+       +   L+ CK
Sbjct: 70  KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 107

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FGVV  G W+ QY VA+K I E       F  E + +  +SH  +V+LYG CT
Sbjct: 15  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 64  GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
              P+ ++ EY   G L N L+       +   L+ CK
Sbjct: 75  KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 112

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FGVV  G W+ QY VA+K I E       F  E + +  +SH  +V+LYG CT
Sbjct: 21  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 64  GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
              P+ ++ EY   G L N L+       +   L+ CK
Sbjct: 81  KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 118

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FGVV  G W+ QY VA+K I E       F  E + +  +SH  +V+LYG CT
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 64  GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
              P+ ++ EY   G L N L+       +   L+ CK
Sbjct: 90  KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 127

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FGVV  G W+ QY VA+K I E       F  E + +  +SH  +V+LYG CT
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 64  GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
              P+ ++ EY   G L N L+       +   L+ CK
Sbjct: 90  KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 127

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 12/89 (13%)
Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHI-------ETEAERK--AFAVEVRQLSRVSHPN 54
           K +G+G FG+V KG  +     VA+K +       ETE   K   F  EV  +S ++HPN
Sbjct: 25  KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 55  IVKLYGACTGNPVCLVMEYAEGGSLYNEL 83
           IVKLYG    NP  +VME+   G LY+ L
Sbjct: 85  IVKLYG-LMHNPPRMVMEFVPCGDLYHRL 112

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 5   SKIVGQGAFGVVWKG--LWQNQYVAVKHI-------ETEAERK--AFAVEVRQLSRVSHP 53
            K +G+G FG+V KG  +     VA+K +       ETE   K   F  EV  +S ++HP
Sbjct: 24  EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 54  NIVKLYGACTGNPVCLVMEYAEGGSLYNEL 83
           NIVKLYG    NP  +VME+   G LY+ L
Sbjct: 84  NIVKLYG-LMHNPPRMVMEFVPCGDLYHRL 112

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 12/89 (13%)
Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHI-------ETEAERK--AFAVEVRQLSRVSHPN 54
           K +G+G FG+V KG  +     VA+K +       ETE   K   F  EV  +S ++HPN
Sbjct: 25  KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 55  IVKLYGACTGNPVCLVMEYAEGGSLYNEL 83
           IVKLYG    NP  +VME+   G LY+ L
Sbjct: 85  IVKLYG-LMHNPPRMVMEFVPCGDLYHRL 112

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 6   KIVGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FG VW G W  N  VA+K ++      ++F  E + + ++ H  +V+LY   +
Sbjct: 15  KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
             P+ +V EY   GSL + L+     +LK   +
Sbjct: 75  EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNL 107

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 16  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 75
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 76  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 106

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 17  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 77  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 107

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGA----- 61
           +G+G FG VW+G W+ + VAVK   +  ER  F   E+ Q   + H NI+    A     
Sbjct: 50  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 109
Query: 62  CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            T   + LV +Y E GSL++ L R +       K+ L
Sbjct: 110 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 146

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 27  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 87  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 117

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 81  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 111

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 81  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 111

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 22  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 81
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 82  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 112

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 26  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 85
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 86  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 116

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 23  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 82
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 83  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 113

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 30  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 89
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 90  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 120

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 81  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 111

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 31  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 90
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 91  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 121

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 29  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 88
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 89  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 119

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 6   KIVGQGAFGVV-------WKGLWQNQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNI 55
           K +G+G FG V        KG      VAVK ++  A   E +    E   L +V+HP++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 56  VKLYGACTGN-PVCLVMEYAEGGSLYNELQRS 86
           +KLYGAC+ + P+ L++EYA+ GSL   L+ S
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G FG VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 27  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 87  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 117

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGA----- 61
           +G+G FG VW+G W+ + VAVK   +  ER  F   E+ Q   + H NI+    A     
Sbjct: 37  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 96
Query: 62  CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            T   + LV +Y E GSL++ L R +       K+ L
Sbjct: 97  GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 133

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 6   KIVGQGAFGVV-------WKGLWQNQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNI 55
           K +G+G FG V        KG      VAVK ++  A   E +    E   L +V+HP++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 56  VKLYGACTGN-PVCLVMEYAEGGSLYNELQRS 86
           +KLYGAC+ + P+ L++EYA+ GSL   L+ S
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 6   KIVGQGAFGVV-------WKGLWQNQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNI 55
           K +G+G FG V        KG      VAVK ++  A   E +    E   L +V+HP++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 56  VKLYGACTGN-PVCLVMEYAEGGSLYNELQRS 86
           +KLYGAC+ + P+ L++EYA+ GSL   L+ S
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 49  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V EY E GSL + L++  A
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 140

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V EY E GSL + L++  A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V EY E GSL + L++  A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V EY E GSL + L++  A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V EY E GSL + L++  A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V EY E GSL + L++  A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V EY E GSL + L++  A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V EY E GSL + L++  A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYGAC 62
           +G+G FG V+ G  +  N  VAVK          +  F  E R L + SHPNIV+L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 63  T-GNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           T   P+ +VME  +GG     L R+  A L+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL-RTEGARLR 211

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 16  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V EY   GSL + L+  +   L+  ++
Sbjct: 76  PIXIVTEYMSKGSLLDFLKGETGKYLRLPQL 106

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6   KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++   +N  +AV     K+  +++ R+ F  E   + +  HP+IVK
Sbjct: 16  RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQ 84
           L G  T NPV ++ME    G L + LQ
Sbjct: 76  LIGVITENPVWIIMELCTLGELRSFLQ 102

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYGAC 62
           +G+G FG V+ G  +  N  VAVK          +  F  E R L + SHPNIV+L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 63  T-GNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           T   P+ +VME  +GG     L R+  A L+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL-RTEGARLR 211

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6   KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++   +N  +AV     K+  +++ R+ F  E   + +  HP+IVK
Sbjct: 44  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQ 84
           L G  T NPV ++ME    G L + LQ
Sbjct: 104 LIGVITENPVWIIMELCTLGELRSFLQ 130

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6   KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++   +N  +AV     K+  +++ R+ F  E   + +  HP+IVK
Sbjct: 16  RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQ 84
           L G  T NPV ++ME    G L + LQ
Sbjct: 76  LIGVITENPVWIIMELCTLGELRSFLQ 102

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6   KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++   +N  +AV     K+  +++ R+ F  E   + +  HP+IVK
Sbjct: 16  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQ 84
           L G  T NPV ++ME    G L + LQ
Sbjct: 76  LIGVITENPVWIIMELCTLGELRSFLQ 102

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6   KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++   +N  +AV     K+  +++ R+ F  E   + +  HP+IVK
Sbjct: 21  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQ 84
           L G  T NPV ++ME    G L + LQ
Sbjct: 81  LIGVITENPVWIIMELCTLGELRSFLQ 107

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6   KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++   +N  +AV     K+  +++ R+ F  E   + +  HP+IVK
Sbjct: 16  RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQ 84
           L G  T NPV ++ME    G L + LQ
Sbjct: 76  LIGVITENPVWIIMELCTLGELRSFLQ 102

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKF 93
           P+ +V EY   GSL + L+  +   L+ 
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETGKYLRL 279

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 23  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V EY   GSL + L+  +   L+  ++
Sbjct: 83  PIYIVTEYMNKGSLLDFLKGETGKYLRLPQL 113

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6  KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
          + +G+G FG V +G++   +N  +AV     K+  +++ R+ F  E   + +  HP+IVK
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
          L G  T NPV ++ME    G L + LQ
Sbjct: 73 LIGVITENPVWIIMELCTLGELRSFLQ 99

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 23  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V EY   GSL + L+  +   L+  ++
Sbjct: 83  PIYIVTEYMNKGSLLDFLKGETGKYLRLPQL 113

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6   KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++   +N  +AV     K+  +++ R+ F  E   + +  HP+IVK
Sbjct: 19  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQ 84
           L G  T NPV ++ME    G L + LQ
Sbjct: 79  LIGVITENPVWIIMELCTLGELRSFLQ 105

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 39  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V EY E GSL + L++  A
Sbjct: 99  LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 130

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 22  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V EY E GSL + L++  A
Sbjct: 82  LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 113

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKF 93
           P+ +V EY   GSL + L+  +   L+ 
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETGKYLRL 279

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6   KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++   +N  +AV     K+  +++ R+ F  E   + +  HP+IVK
Sbjct: 18  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQ 84
           L G  T NPV ++ME    G L + LQ
Sbjct: 78  LIGVITENPVWIIMELCTLGELRSFLQ 104

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 19  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V EY   GSL + L+  +   L+  ++
Sbjct: 79  PIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 109

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKF 93
           P+ +V EY   GSL + L+  +   L+ 
Sbjct: 335 PIYIVTEYMSKGSLLDFLKGETGKYLRL 362

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V EY   GSL + L+      L+  ++
Sbjct: 86  PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V+EY   GSL + L+      L+  ++
Sbjct: 86  PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL 116

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V+EY   GSL + L+      L+  ++
Sbjct: 86  PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL 116

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6   KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++   +N  +AV     K+  +++ R+ F  E   + +  HP+IVK
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQ 84
           L G  T NPV ++ME    G L + LQ
Sbjct: 456 LIGVITENPVWIIMELCTLGELRSFLQ 482

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6   KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++   +N  +AV     K+  +++ R+ F  E   + +  HP+IVK
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQ 84
           L G  T NPV ++ME    G L + LQ
Sbjct: 456 LIGVITENPVWIIMELCTLGELRSFLQ 482

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 32  IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 64  GNPVCLVMEYAEGGSLYNELQRSSA 88
              + +V ++ EG SLY+ L  S  
Sbjct: 91  APQLAIVTQWCEGSSLYHHLHASET 115

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +VMEY   G L + L+      L+  ++
Sbjct: 86  PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQL 116

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKF 93
           P+ +V EY   GSL + L+      L+ 
Sbjct: 253 PIYIVTEYMSKGSLLDFLKGEMGKYLRL 280

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKF 93
           P+ +V EY   GSL + L+  +   L+ 
Sbjct: 252 PIYIVGEYMSKGSLLDFLKGETGKYLRL 279

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8  VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 16 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
             + +V ++ EG SLY+ L 
Sbjct: 75 APQLAIVTQWCEGSSLYHHLH 95

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGAC---- 62
           +G+G FG VW+G W+ + VAVK   +  ER  F   E+ Q   + H NI+    A     
Sbjct: 14  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 73
Query: 63  -TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            T   + LV +Y E GSL++ L R +       K+ L
Sbjct: 74  GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 110

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGAC---- 62
           +G+G FG VW+G W+ + VAVK   +  ER  F   E+ Q   + H NI+    A     
Sbjct: 12  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 71
Query: 63  -TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            T   + LV +Y E GSL++ L R +       K+ L
Sbjct: 72  GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 108

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGAC---- 62
           +G+G FG VW+G W+ + VAVK   +  ER  F   E+ Q   + H NI+    A     
Sbjct: 17  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 76
Query: 63  -TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            T   + LV +Y E GSL++ L R +       K+ L
Sbjct: 77  GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 113

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGAC---- 62
           +G+G FG VW+G W+ + VAVK   +  ER  F   E+ Q   + H NI+    A     
Sbjct: 11  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 70
Query: 63  -TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            T   + LV +Y E GSL++ L R +       K+ L
Sbjct: 71  GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 107

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 17  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V EY   GSL + L+      L+  ++
Sbjct: 77  PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 107

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 8   VGQGAFGVVWK----GLWQNQ---YVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVK 57
           +G+GAFG V++    GL   +    VAVK ++ EA    +  F  E   ++   +PNIVK
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
           L G C  G P+CL+ EY   G L NE  RS
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDL-NEFLRS 143

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 6   KIVGQGAFGVVWK----GLWQNQYV---AVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
           K +G GAFG V +    GL +   V   AVK +++ A   E++A   E++ +S +  H N
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASL 91
           IV L GACT G PV ++ EY   G L N L+R + A L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 149

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 20  IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 64  GNPVCLVMEYAEGGSLYNELQRSSA 88
              + +V ++ EG SLY+ L  S  
Sbjct: 79  KPQLAIVTQWCEGSSLYHHLHASET 103

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 5   SKIVGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYG 60
           S  +G G+FG V+KG W    VAVK ++    T  + +AF  EV  L +  H NI+   G
Sbjct: 41  STRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 61  ACTGNPVCLVMEYAEGGSLYNELQ 84
             T + + +V ++ EG SLY  L 
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLH 123

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V EY   GSL + L+      L+  ++
Sbjct: 86  PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 32  IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 64  GNPVCLVMEYAEGGSLYNELQRSSA 88
              + +V ++ EG SLY+ L  S  
Sbjct: 91  KPQLAIVTQWCEGSSLYHHLHASET 115

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 15  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V EY   GSL + L+      L+  ++
Sbjct: 75  PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 105

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V EY   GSL + L+      L+  ++
Sbjct: 86  PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 12/99 (12%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
           K +G GAFG V +    GL +      VAVK +++ A   E++A   E++ +S +  H N
Sbjct: 44  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           IV L GACT G PV ++ EY   G L N L+R + A L 
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 142

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8  VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 18 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 76
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
             + +V ++ EG SLY+ L 
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLH 97

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 21  IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 64  GNPVCLVMEYAEGGSLYNELQ 84
              + +V ++ EG SLY+ L 
Sbjct: 80  KPQLAIVTQWCEGSSLYHHLH 100

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 21  IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 64  GNPVCLVMEYAEGGSLYNELQ 84
              + +V ++ EG SLY+ L 
Sbjct: 80  KPQLAIVTQWCEGSSLYHHLH 100

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 43  IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 101
Query: 64  GNPVCLVMEYAEGGSLYNELQ 84
              + +V ++ EG SLY+ L 
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLH 122

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 36  IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 94
Query: 64  GNPVCLVMEYAEGGSLYNELQ 84
              + +V ++ EG SLY+ L 
Sbjct: 95  KPQLAIVTQWCEGSSLYHHLH 115

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 44  IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 64  GNPVCLVMEYAEGGSLYNELQ 84
              + +V ++ EG SLY+ L 
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLH 123

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 44  IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 64  GNPVCLVMEYAEGGSLYNELQ 84
              + +V ++ EG SLY+ L 
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLH 123

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8  VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 16 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
             + +V ++ EG SLY+ L 
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH 95

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8  VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G  T
Sbjct: 16 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
             + +V ++ EG SLY+ L 
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH 95

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V EY   GSL + L+      L+  ++
Sbjct: 86  PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQL 116

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKAFAV---EVRQLSRVSHPNIV 56
           K++G G FG V KG+W  +       V +K IE ++ R++F      +  +  + H +IV
Sbjct: 37  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAA 89
           +L G C G+ + LV +Y   GSL + +++   A
Sbjct: 97  RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGA 129

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGA----- 61
           VG+G +G VW+G WQ + VAVK   +  E+  F   E+     + H NI+    +     
Sbjct: 45  VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 104
Query: 62  CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            +   + L+  Y E GSLY+ LQ ++  ++   +I L
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL 141

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
           K +G GAFG V +    GL +      VAVK +++ A   E++A   E++ +S +  H N
Sbjct: 37  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASL 91
           IV L GACT G PV ++ EY   G L N L+R + A L
Sbjct: 97  IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAML 134

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIV-----KLYGA 61
           VG+G +G VW+GLW  + VAVK   +  E+  F   E+     + H NI+      +   
Sbjct: 16  VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSR 75
Query: 62  CTGNPVCLVMEYAEGGSLYNELQRSS 87
            +   + L+  Y E GSLY+ LQR +
Sbjct: 76  NSSTQLWLITHYHEHGSLYDFLQRQT 101

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 5   SKIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIV 56
            +++G G FG V  G  +     +  VA+K ++   TE +R+ F  E   + +  HPN+V
Sbjct: 48  ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 57  KLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
            L G  T G PV +V+E+ E G+L   L++  
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHD 139

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKAFAV---EVRQLSRVSHPNIV 56
           K++G G FG V KG+W  +       V +K IE ++ R++F      +  +  + H +IV
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAA 89
           +L G C G+ + LV +Y   GSL + +++   A
Sbjct: 79  RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGA 111

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G G  G VW G +  +  VAVK ++       AF  E   + ++ H  +V+LY   T  
Sbjct: 21  LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ ++ EY E GSL + L+  S   L   K+
Sbjct: 81  PIYIITEYMENGSLVDFLKTPSGIKLTINKL 111

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIV-----KLYGA 61
           VG+G +G VW+G WQ + VAVK   +  E+  F   E+     + H NI+      +   
Sbjct: 16  VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 62  CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            +   + L+  Y E GSLY+ LQ ++  ++   +I L
Sbjct: 76  HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL 112

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIV-----KLYGA 61
           VG+G +G VW+G WQ + VAVK   +  E+  F   E+     + H NI+      +   
Sbjct: 16  VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 62  CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            +   + L+  Y E GSLY+ LQ ++  ++   +I L
Sbjct: 76  HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL 112

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 8   VGQGAFGVVWKGLWQN-------QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKL 58
           +G+GAFG V+     N         VAVK ++  T A RK F  E   L+ + H +IVK 
Sbjct: 23  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
           YG C  G+P+ +V EY + G L N+  R+    
Sbjct: 83  YGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPD 114

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           +++G G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI+ 
Sbjct: 28  RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           L G  T   PV +V EY E GSL   L+++ 
Sbjct: 88  LEGVVTKSKPVMIVTEYMENGSLDTFLKKND 118

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 12/100 (12%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
           K +G GAFG V +    GL +      VAVK +++ A   E++A   E++ +S +  H N
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
           IV L GACT G PV ++ EY   G L N L+R     L++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEY 151

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V E  E GSL + L++  A
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA 142

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V E  E GSL + L++  A
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA 142

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      GL +++      VAVK ++++A  K  +  + ++  +     H
Sbjct: 19  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKFC 94
            NI+ L GACT + P+ +++EYA  G+L   LQ      L++C
Sbjct: 79  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 121

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           +++G G FG V  G  +       +VA+K ++   TE +R+ F  E   + +  HPN++ 
Sbjct: 39  QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           L G  T   PV ++ E+ E GSL + L+++ 
Sbjct: 99  LEGVVTKSTPVMIITEFMENGSLDSFLRQND 129

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 22  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
           L G  T   PV +V E  E GSL + L++  A
Sbjct: 82  LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA 113

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8   VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +GQG FG VW G W     VA+K ++      +AF  E + + ++ H  +V+LY   +  
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66  PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           P+ +V EY   G L + L+      L+  ++
Sbjct: 86  PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQL 116

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
           K +G GAFG V +    GL +      VAVK +++ A   E++A   E++ +S +  H N
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           IV L GACT G PV ++ EY   G L N L+R S
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
           K +G GAFG V +    GL +      VAVK +++ A   E++A   E++ +S +  H N
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           IV L GACT G PV ++ EY   G L N L+R S
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           +++G G FG V  G  +       +VA+K ++   TE +R+ F  E   + +  HPN++ 
Sbjct: 13  QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           L G  T   PV ++ E+ E GSL + L+++ 
Sbjct: 73  LEGVVTKSTPVMIITEFMENGSLDSFLRQND 103

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 2   LGGSKIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV- 50
           L   K +G GAFG V +    GL ++     VAVK ++  A   ER+A   E++ LS + 
Sbjct: 25  LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 51  SHPNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
           +H NIV L GACT G P  ++ EY   G L N L+R
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 120

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIV-----KLY 59
           K +G+G +G VW G W+ + VAVK   T  E   F   E+ Q   + H NI+      + 
Sbjct: 43  KQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 60  GACTGNPVCLVMEYAEGGSLYNELQRSS 87
           G  +   + L+ +Y E GSLY+ L+ ++
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKSTT 130

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ ++   + VAVK ++   T +E KA   E++ L+ + H  N
Sbjct: 33  KSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLN 92
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++EY + G+L N L+
Sbjct: 93  VVNLLGACTKQGGPLMVIVEYCKYGNLSNYLK 124

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 5   SKIVGQGAFGVVWKGLWQNQY-----VAVKHIETEA---ERKAFAVEVRQLSRVSHPNIV 56
           ++I+G+G FG V++G++ N       VAVK  + +     ++ F  E   +  + HP+IV
Sbjct: 17  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAA---------SLKFCK 95
           KL G     P  ++ME    G L + L+R+  +         SL+ CK
Sbjct: 77  KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK 124

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 5   SKIVGQGAFGVVWKGLWQNQY-----VAVKHIE---TEAERKAFAVEVRQLSRVSHPNIV 56
           ++I+G+G FG V++G++ N       VAVK  +   T   ++ F  E   +  + HP+IV
Sbjct: 29  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAA---------SLKFCK 95
           KL G     P  ++ME    G L + L+R+  +         SL+ CK
Sbjct: 89  KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK 136

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 2   LGGSKIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV- 50
           L   K +G GAFG V +    GL ++     VAVK ++  A   ER+A   E++ LS + 
Sbjct: 41  LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 100
Query: 51  SHPNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
           +H NIV L GACT G P  ++ EY   G L N L+R
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 136

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 5   SKIVGQGAFGVVWKGLWQNQY-----VAVKHIETEA---ERKAFAVEVRQLSRVSHPNIV 56
           ++I+G+G FG V++G++ N       VAVK  + +     ++ F  E   +  + HP+IV
Sbjct: 13  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAA---------SLKFCK 95
           KL G     P  ++ME    G L + L+R+  +         SL+ CK
Sbjct: 73  KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK 120

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K++G G FG V  G  +        VA+K ++   T+ +R+ F  E   + +  HPNI+ 
Sbjct: 35  KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 58  LYGACTG-NPVCLVMEYAEGGSLYNELQRSS 87
           L G  T   PV ++ EY E GSL   L+++ 
Sbjct: 95  LEGVVTKCKPVMIITEYMENGSLDAFLRKND 125

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K++G G FG V  G  +        VA+K ++   T+ +R+ F  E   + +  HPNI+ 
Sbjct: 14  KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 58  LYGACTG-NPVCLVMEYAEGGSLYNELQRSS 87
           L G  T   PV ++ EY E GSL   L+++ 
Sbjct: 74  LEGVVTKCKPVMIITEYMENGSLDAFLRKND 104

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G FG V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 19  LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 79  EPPFYIITEFMTYGNLLDYLRE 100

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           +++G G FG V +G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 22  EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 58  LYGACTGN-PVCLVMEYAEGGSLYNELQ 84
           L G  T + PV ++ E+ E G+L + L+
Sbjct: 82  LEGVVTNSMPVMILTEFMENGALDSFLR 109

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 8   VGQGAFGVVWKGLWQNQ-------YVAVKHIETEAE--RKAFAVEVRQLSRVSHPNIVKL 58
           +G+GAFG V+     N         VAVK ++  ++  RK F  E   L+ + H +IVK 
Sbjct: 21  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 59  YGACT-GNPVCLVMEYAEGGSLYNELQRSSAAS 90
           YG C  G+P+ +V EY + G L N+  R+    
Sbjct: 81  YGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPD 112

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 2   LGGSKIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV- 50
           L   K +G GAFG V +    GL ++     VAVK ++  A   ER+A   E++ LS + 
Sbjct: 43  LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 102
Query: 51  SHPNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
           +H NIV L GACT G P  ++ EY   G L N L+R
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 138

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K++G G FG V  G  +        VA+K ++   T+ +R+ F  E   + +  HPNI+ 
Sbjct: 20  KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 58  LYGACTG-NPVCLVMEYAEGGSLYNELQRSS 87
           L G  T   PV ++ EY E GSL   L+++ 
Sbjct: 80  LEGVVTKCKPVMIITEYMENGSLDAFLRKND 110

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 2   LGGSKIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV- 50
           L   K +G GAFG V +    GL ++     VAVK ++  A   ER+A   E++ LS + 
Sbjct: 48  LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 107
Query: 51  SHPNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
           +H NIV L GACT G P  ++ EY   G L N L+R
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 143

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETEAERKA----------FAVEVRQLSRVSHPNIVK 57
           +GQG++GVV   + +NQ  A++ I+   + K              EVR + ++ HPNI +
Sbjct: 34  IGQGSYGVVRVAI-ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR 92
Query: 58  LYGACTGNP-VCLVMEYAEGGSLYNEL 83
           LY        +CLVME   GG L ++L
Sbjct: 93  LYEVYEDEQYICLVMELCHGGHLLDKL 119

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           +++G G FG V +G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 20  EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 58  LYGACTGN-PVCLVMEYAEGGSLYNELQ 84
           L G  T + PV ++ E+ E G+L + L+
Sbjct: 80  LEGVVTNSMPVMILTEFMENGALDSFLR 107

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 2   LGGSKIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV- 50
           L   K +G GAFG V +    GL ++     VAVK ++  A   ER+A   E++ LS + 
Sbjct: 48  LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 107
Query: 51  SHPNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
           +H NIV L GACT G P  ++ EY   G L N L+R
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 143

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAER----KAFAVEVRQLSRVSHPNIVKLYGA 61
           +++G+G FG V+ G W  + VA++ I+ E +     KAF  EV    +  H N+V   GA
Sbjct: 39  ELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 62  CTGNP-VCLVMEYAEGGSLYN 81
           C   P + ++    +G +LY+
Sbjct: 98  CMSPPHLAIITSLCKGRTLYS 118

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 12/91 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQY---VAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
           K++G GAFG V      G+ +      VAVK ++ +A   ER+A   E++ ++++ SH N
Sbjct: 51  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
           IV L GACT   P+ L+ EY   G L N L+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 141

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 6   KIVGQGAFGVV----WKGLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      GL +++      VAVK ++++A  K  +  + ++  +     H
Sbjct: 34  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKFC 94
            NI+ L GACT + P+ +++EYA  G+L   LQ      L++C
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 136

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 8   VGQGAFGVVWKGLW-----QNQYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVK 57
           +G G+FGVV +G W     +   VAVK ++ +   +      F  EV  +  + H N+++
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQR 85
           LYG     P+ +V E A  GSL + L++
Sbjct: 76  LYGVVLTPPMKMVTELAPLGSLLDRLRK 103

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 8   VGQGAFGVVWKGLW-----QNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVK 57
           +G G+FGVV +G W     +   VAVK ++ +          F  EV  +  + H N+++
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQR 85
           LYG     P+ +V E A  GSL + L++
Sbjct: 86  LYGVVLTPPMKMVTELAPLGSLLDRLRK 113

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           + +G+G FG V  G ++   VAVK I+ +A  +AF  E   ++++ H N+V+L G     
Sbjct: 27  QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 66  P--VCLVMEYAEGGSLYNELQ 84
              + +V EY   GSL + L+
Sbjct: 87  KGGLYIVTEYMAKGSLVDYLR 107

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 8   VGQGAFGVVWKGLW-----QNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVK 57
           +G G+FGVV +G W     +   VAVK ++ +          F  EV  +  + H N+++
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQR 85
           LYG     P+ +V E A  GSL + L++
Sbjct: 76  LYGVVLTPPMKMVTELAPLGSLLDRLRK 103

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETE--AERKA--FAVEVRQLSRVSHPNIVKLYGACT 63
           + +   G +WKG WQ   + VK ++    + RK+  F  E  +L   SHPN++ + GAC 
Sbjct: 18  LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 64  GNPV---CLVMEYAEGGSLYNELQRSS 87
             P     L+  +   GSLYN L   +
Sbjct: 78  SPPAPHPTLITHWMPYGSLYNVLHEGT 104

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 8   VGQGAFGVVWKGLW-----QNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVK 57
           +G G+FGVV +G W     +   VAVK ++ +          F  EV  +  + H N+++
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQR 85
           LYG     P+ +V E A  GSL + L++
Sbjct: 76  LYGVVLTPPMKMVTELAPLGSLLDRLRK 103

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 8   VGQGAFGVVWKGLW-----QNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVK 57
           +G G+FGVV +G W     +   VAVK ++ +          F  EV  +  + H N+++
Sbjct: 20  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQR 85
           LYG     P+ +V E A  GSL + L++
Sbjct: 80  LYGVVLTPPMKMVTELAPLGSLLDRLRK 107

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 8   VGQGAFGVVWKGLW-----QNQYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVK 57
           +G G+FGVV +G W     +   VAVK ++ +   +      F  EV  +  + H N+++
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQR 85
           LYG     P+ +V E A  GSL + L++
Sbjct: 86  LYGVVLTPPMKMVTELAPLGSLLDRLRK 113

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          + +G+G FG V  G ++   VAVK I+ +A  +AF  E   ++++ H N+V+L G     
Sbjct: 18 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 66 P--VCLVMEYAEGGSLYNELQ 84
             + +V EY   GSL + L+
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLR 98

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 19  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  +++E+   G+L + L+ 
Sbjct: 79  EPPFYIIIEFMTYGNLLDYLRE 100

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          + +G+G FG V  G ++   VAVK I+ +A  +AF  E   ++++ H N+V+L G     
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 66 P--VCLVMEYAEGGSLYNELQ 84
             + +V EY   GSL + L+
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLR 92

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIETE--AERKA--FAVEVRQLSRVSHPNIVKLYGACT 63
           + +   G +WKG WQ   + VK ++    + RK+  F  E  +L   SHPN++ + GAC 
Sbjct: 18  LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 64  GNPV---CLVMEYAEGGSLYNELQ 84
             P     L+  +   GSLYN L 
Sbjct: 78  SPPAPHPTLITHWXPYGSLYNVLH 101

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  +++E+   G+L + L+ 
Sbjct: 81  EPPFYIIIEFMTYGNLLDYLRE 102

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQNQ--YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+     VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  +++E+   G+L + L+ 
Sbjct: 86  EPPFYIIIEFMTYGNLLDYLRE 107

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  +++E+   G+L + L+ 
Sbjct: 82  EPPFYIIIEFMTYGNLLDYLRE 103

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  +++E+   G+L + L+ 
Sbjct: 81  EPPFYIIIEFMTYGNLLDYLRE 102

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           + +G+G FG V  G ++   VAVK I+ +A  +AF  E   ++++ H N+V+L G     
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 66  P--VCLVMEYAEGGSLYNELQRSSAASL 91
              + +V EY   GSL + L+    + L
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSVL 286

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 6   KIVGQGAFGVVWKGLWQNQY------VAVKHIE---TEAERKAFAVEVRQLSRVSHPNIV 56
           K++G G FG V+KG+ +         VA+K ++   TE +R  F  E   + + SH NI+
Sbjct: 50  KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 57  KLYGACTG-NPVCLVMEYAEGGSL 79
           +L G  +   P+ ++ EY E G+L
Sbjct: 110 RLEGVISKYKPMMIITEYMENGAL 133

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT- 63
           +G G +G V+ G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 40  LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 64  GNPVCLVMEYAEGGSLYNELQR 85
             P  +V EY   G+L + L+ 
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRE 121

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 8   VGQGAFGVVWKGLW-------QNQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVK 57
           +G+  FG V+KG         Q Q VA+K ++ +AE   R+ F  E    +R+ HPN+V 
Sbjct: 34  LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 58  LYGACTGN-PVCLVMEYAEGGSLYNELQRSSAAS 90
           L G  T + P+ ++  Y   G L+  L   S  S
Sbjct: 94  LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHS 127

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 8   VGQGAFGVVWKGLW-------QNQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVK 57
           +G+  FG V+KG         Q Q VA+K ++ +AE   R+ F  E    +R+ HPN+V 
Sbjct: 17  LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 58  LYGACTGN-PVCLVMEYAEGGSLYNELQRSSAAS 90
           L G  T + P+ ++  Y   G L+  L   S  S
Sbjct: 77  LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHS 110

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 86  EPPFYIITEFMTYGNLLDYLRE 107

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 19  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 79  EPPFYIITEFMTYGNLLDYLRE 100

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 82  EPPFYIITEFMTYGNLLDYLRE 103

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 86  EPPFYIITEFMTYGNLLDYLRE 107

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 86  EPPFYIITEFMTYGNLLDYLRE 107

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 86  EPPFYIITEFMTYGNLLDYLRE 107

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 81  EPPFYIITEFMTYGNLLDYLRE 102

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQNQ--YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+     VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 34  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 94  EPPFYIITEFMTYGNLLDYLRE 115

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 83  EPPFYIITEFMTYGNLLDYLRE 104

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 81  EPPFYIITEFMTYGNLLDYLRE 102

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQNQ--YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+     VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 25  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 85  EPPFYIITEFMTYGNLLDYLRE 106

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 83  EPPFYIITEFMTYGNLLDYLRE 104

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 83  EPPFYIITEFMTYGNLLDYLRE 104

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 81  EPPFYIITEFMTYGNLLDYLRE 102

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 8   VGQGAFGVVWKGLWQNQ--YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+     VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65  N-PVCLVMEYAEGGSLYNELQR 85
             P  ++ E+   G+L + L+ 
Sbjct: 81  EPPFYIITEFMTYGNLLDYLRE 102

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 65  N-PVCLVMEYAEGGSLYNELQ 84
             P  ++ E+   G+L + L+
Sbjct: 288 EPPFYIITEFMTYGNLLDYLR 308

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      GL +++      VAVK ++++A  K  +  + ++  +     H
Sbjct: 34  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   LQ      L++
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEY 135

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      GL +++      VAVK ++++A  K  +  + ++  +     H
Sbjct: 34  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   LQ      L++
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 135

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      GL +++      VAVK ++++A  K  +  + ++  +     H
Sbjct: 27  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   LQ      L++
Sbjct: 87  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 128

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 8   VGQGAFGVVWKGLW-----QNQYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVK 57
           +G G+FGVV +G W     +   VAVK ++ +   +      F  EV  +  + H N+++
Sbjct: 20  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQR 85
           LYG     P+ +V E A  GSL + L++
Sbjct: 80  LYGVVLTPPMKMVTELAPLGSLLDRLRK 107

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      GL +++      VAVK ++++A  K  +  + ++  +     H
Sbjct: 26  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   LQ      L++
Sbjct: 86  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 127

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      GL +++      VAVK ++++A  K  +  + ++  +     H
Sbjct: 23  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   LQ      L++
Sbjct: 83  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 124

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
           +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G CT 
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 65  N-PVCLVMEYAEGGSLYNELQ 84
             P  ++ E+   G+L + L+
Sbjct: 327 EPPFYIITEFMTYGNLLDYLR 347

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 8   VGQGAFGVVWKGLWQNQYVAVKHIE------TEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           +G+G+F  V+KGL     V V   E      T++ER+ F  E   L  + HPNIV+ Y +
Sbjct: 34  IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 62  ----CTGNP-VCLVMEYAEGGSLYNELQRSSAASLK 92
                 G   + LV E    G+L   L+R     +K
Sbjct: 94  WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK 129

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KG+W  +       VA+K +      KA   F  E   ++ + HP++V
Sbjct: 44  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 57  KLYGACTGNPVCLVMEYAEGGSL 79
           +L G C    + LV +    G L
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCL 126

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KG+W  +       VA+K +      KA   F  E   ++ + HP++V
Sbjct: 21  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 57  KLYGACTGNPVCLVMEYAEGGSL 79
           +L G C    + LV +    G L
Sbjct: 81  RLLGVCLSPTIQLVTQLMPHGCL 103

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVV----WKGLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      GL +++      VAVK ++++A  K  +  + ++  +     H
Sbjct: 34  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   LQ      L+F
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEF 135

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 22  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+M+    G L +
Sbjct: 82  RLLGICLTSTVQLIMQLMPFGXLLD 106

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+M+    G L +
Sbjct: 81  RLLGICLTSTVQLIMQLMPFGCLLD 105

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+M+    G L +
Sbjct: 83  RLLGICLTSTVQLIMQLMPFGCLLD 107

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 22  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+M+    G L +
Sbjct: 82  RLLGICLTSTVQLIMQLMPFGCLLD 106

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 25  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+M+    G L +
Sbjct: 85  RLLGICLTSTVQLIMQLMPFGCLLD 109

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+M+    G L +
Sbjct: 84  RLLGICLTSTVQLIMQLMPFGCLLD 108

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+M+    G L +
Sbjct: 83  RLLGICLTSTVQLIMQLMPFGCLLD 107

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+M+    G L +
Sbjct: 83  RLLGICLTSTVQLIMQLMPFGCLLD 107

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 25  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+M+    G L +
Sbjct: 85  RLLGICLTSTVQLIMQLMPFGCLLD 109

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FG VW G + N   VAVK ++      +AF  E   +  + H  +V+LY   T
Sbjct: 19  KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 64  -GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
              P+ ++ EY   GSL + L+      +   K+
Sbjct: 79  REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL 112

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ +     +Y A+K +  E      E      E R L    HP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    + +  + Y
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 6   KIVGQGAFGVVWKGLWQNQY--VAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G FG V+    +  +  VA+K      IE E        E+   + + HPNI++L
Sbjct: 29  RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
           Y        + L++EYA  G LY ELQ+S
Sbjct: 89  YNYFYDRRRIYLILEYAPRGELYKELQKS 117

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 23/88 (26%)
Query: 8  VGQGAFG-------------VVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPN 54
          +G G++G             +VWK L    Y ++    TEAE++    EV  L  + HPN
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL---DYGSM----TEAEKQMLVSEVNLLRELKHPN 66
Query: 55 IVKLYGAC---TGNPVCLVMEYAEGGSL 79
          IV+ Y      T   + +VMEY EGG L
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDL 94

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 23/88 (26%)
Query: 8  VGQGAFG-------------VVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPN 54
          +G G++G             +VWK L    Y ++    TEAE++    EV  L  + HPN
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL---DYGSM----TEAEKQMLVSEVNLLRELKHPN 66
Query: 55 IVKLYGAC---TGNPVCLVMEYAEGGSL 79
          IV+ Y      T   + +VMEY EGG L
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDL 94

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 23/88 (26%)
Query: 8  VGQGAFG-------------VVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPN 54
          +G G++G             +VWK L    Y ++    TEAE++    EV  L  + HPN
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL---DYGSM----TEAEKQMLVSEVNLLRELKHPN 66
Query: 55 IVKLYGAC---TGNPVCLVMEYAEGGSL 79
          IV+ Y      T   + +VMEY EGG L
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDL 94

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 8  VGQGAFGVVWKGLWQNQ--YVAVKHIETEAERKAFAVEVRQLS---RVSHPNIVKLYGAC 62
          +G G +  V+KGL +    YVA+K ++ ++E    +  +R++S    + H NIV+LY   
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 63 -TGNPVCLVMEYAEGG 77
           T N + LV E+ +  
Sbjct: 73 HTENKLTLVFEFMDND 88

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 6   KIVGQGAFGV--VWKGLWQNQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
           K +G G FGV  + +    N+ VAVK+IE  E   +    E+     + HPNIV+     
Sbjct: 25  KDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 63  -TGNPVCLVMEYAEGGSLYNEL 83
            T   + +VMEYA GG L+  +
Sbjct: 85  LTPTHLAIVMEYASGGELFERI 106

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 2   LGGSKIVGQGAFGVVWKGLW-QNQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLY 59
           L   K +G G FG VW   + ++  VAVK ++      +AF  E   +  + H  +VKL+
Sbjct: 17  LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 60  GACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
              T  P+ ++ E+   GSL + L+    +     K+
Sbjct: 77  AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 113

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6  KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
          K +G+G F  V   + +   + VAVK I+     + + +K F  EVR +  ++HPNIVKL
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 71
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNEL 83
          +    T   + LVMEYA GG +++ L
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYL 97

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6   KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
           K +G+G F  V   + +   + VAVK I+     + + +K F  EVR +  ++HPNIVKL
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNEL 83
           +    T   + LVMEYA GG +++ L
Sbjct: 79  FEVIETEKTLYLVMEYASGGEVFDYL 104

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6   KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
           K +G+G F  V   + +   + VAVK I+     + + +K F  EVR +  ++HPNIVKL
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNEL 83
           +    T   + LVMEYA GG +++ L
Sbjct: 79  FEVIETEKTLYLVMEYASGGEVFDYL 104

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6   KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
           K +G+G F  V   + +   + VAVK I+     + + +K F  EVR +  ++HPNIVKL
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNEL 83
           +    T   + LVMEYA GG +++ L
Sbjct: 79  FEVIETEKTLYLVMEYASGGEVFDYL 104

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLWQNQ--YVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G FG V+    +N    +A+K      +E          EV   S + HPNI++L
Sbjct: 14  RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59  YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG    +  V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 74  YGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVV----WKGLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      GL +++      VAVK ++++A  K  +  + ++  +     H
Sbjct: 75  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   LQ      L++
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 176

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FG VW G + N   VAVK ++      +AF  E   +  + H  +V+LY   T
Sbjct: 18  KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 64  G-NPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
              P+ ++ E+   GSL + L+      +   K+
Sbjct: 78  KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL 111

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 6   KIVGQGAFGV--VWKGLWQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVKLYGA 61
           K +G G FGV  + +    N+ VAVK+IE   E+ A  V  E+     + HPNIV+    
Sbjct: 25  KDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPNIVRFKEV 83
Query: 62  C-TGNPVCLVMEYAEGGSLYNEL 83
             T   + +VMEYA GG L+  +
Sbjct: 84  ILTPTHLAIVMEYASGGELFERI 106

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           KI+G G  G V  G  +     +  VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 55  KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 58  LYGACT-GNPVCLVMEYAEGGSL 79
           L G  T G    +V EY E GSL
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSL 137

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ +     +Y A+K +  E      E      E R L    HP +  L
Sbjct: 14  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    + +  + Y
Sbjct: 74  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 113

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ +     +Y A+K +  E      E      E R L    HP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    + +  + Y
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ +     +Y A+K +  E      E      E R L    HP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    + +  + Y
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ +     +Y A+K +  E      E      E R L    HP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    + +  + Y
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ +     +Y A+K +  E      E      E R L    HP +  L
Sbjct: 16  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    + +  + Y
Sbjct: 76  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 115

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ +     +Y A+K +  E      E      E R L    HP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    + +  + Y
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           KI+G G  G V  G  +     +  VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 55  KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 58  LYGACT-GNPVCLVMEYAEGGSL 79
           L G  T G    +V EY E GSL
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSL 137

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ K     +Y A+K ++ E      E      E R L    HP +  L
Sbjct: 14  KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 73
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    S    + Y
Sbjct: 74  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 113

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ K     +Y A+K ++ E      E      E R L    HP +  L
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    S    + Y
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 253

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ K     +Y A+K ++ E      E      E R L    HP +  L
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 216
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    S    + Y
Sbjct: 217 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 256

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ K     +Y A+K ++ E      E      E R L    HP +  L
Sbjct: 15  KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 74
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    S    + Y
Sbjct: 75  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 114

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG  ++ K     +Y A+K ++ E      E      E R L    HP +  L
Sbjct: 16  KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 75
Query: 59  -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            Y   T + +C VMEYA GG L+  L R    S    + Y
Sbjct: 76  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 115

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 78  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 106

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 22  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 82  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 110

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 8   VGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           +G+G++G V+K + +   Q VA+K +  E++ +    E+  + +   P++VK YG+   N
Sbjct: 37  LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 66  -PVCLVMEYAEGGSLYN 81
             + +VMEY   GS+ +
Sbjct: 97  TDLWIVMEYCGAGSVSD 113

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 78  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 106

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 17  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 77  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 105

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 25  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 85  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 113

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 21  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 81  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 109

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 78  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 106

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 23  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 83  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 111

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 24  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 84  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 112

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 16  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 76  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 104

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 19  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 79  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 107

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 36  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 96  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 124

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 36  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 96  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 124

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 4   GSKIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
           G +++G+G+FG  ++ K     Q  AVK      ++ + ++++   EV+ L ++ HPNI+
Sbjct: 36  GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
Query: 57  KLYGACTGNP-VCLVMEYAEGGSLYNEL 83
           KLY          LV E   GG L++E+
Sbjct: 96  KLYEFFEDKGYFYLVGEVYTGGELFDEI 123

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6   KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
           K +G+G F  V   + +   + VAV+ I+     + + +K F  EVR +  ++HPNIVKL
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNEL 83
           +    T   + LVMEYA GG +++ L
Sbjct: 79  FEVIETEKTLYLVMEYASGGEVFDYL 104

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6   KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
           K +G+G F  V   + +   + VAV+ I+     + + +K F  EVR +  ++HPNIVKL
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNEL 83
           +    T   + LVMEYA GG +++ L
Sbjct: 79  FEVIETEKTLYLVMEYASGGEVFDYL 104

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGL-WQNQYVAVKHI--ETEAERKAFAVEVRQ----LSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +T+ E+     ++R+     S + HPNI++L
Sbjct: 18  RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 78  YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI 118

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGL-WQNQYVAVKHI--ETEAERKAFAVEVRQ----LSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +T+ E+     ++R+     S + HPNI++L
Sbjct: 18  RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 78  YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI 118

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 2   LGGSKIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVS 51
           L   K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + 
Sbjct: 29  LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 52  HP-NIVKLYGACT--GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPF 100
           H  N+V L GACT  G P+ +++E+ + G+L   L+      + +  +Y  F
Sbjct: 89  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FG VW   + ++  VAVK ++  +   +AF  E   +  + H  +VKL+   T
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
             P+ ++ E+   GSL + L+    +     K+
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 280

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 2   LGGSKIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVS 51
           L   K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + 
Sbjct: 29  LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 52  HP-NIVKLYGACT--GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPF 100
           H  N+V L GACT  G P+ +++E+ + G+L   L+      + +  +Y  F
Sbjct: 89  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FG VW   + ++  VAVK ++  +   +AF  E   +  + H  +VKL+   T
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
             P+ ++ E+   GSL + L+    +     K+
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 286

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 6   KIVGQGAFGVVWK------GLWQNQYVA-VKHIETEAERKAFAVEVRQLSRV-SHPNIVK 57
            ++G+G FG V K      GL  +  +  +K   ++ + + FA E+  L ++  HPNI+ 
Sbjct: 21  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 58  LYGACTGNP-VCLVMEYAEGGSLYNELQRS 86
           L GAC     + L +EYA  G+L + L++S
Sbjct: 81  LLGACEHRGYLYLAIEYAPHGNLLDFLRKS 110

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6  KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
          K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
          +L G C  + V L+ +    G L +
Sbjct: 75 RLLGICLTSTVQLITQLMPFGCLLD 99

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 7   IVGQGAFGVVWKG-LWQNQYVAVKHIETEAERKA---FAVEVRQLSRVSHPNIVKLYGAC 62
           I+G+G FG V+KG L     VAVK ++ E  +     F  EV  +S   H N+++L G C
Sbjct: 45  ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 63  -TGNPVCLVMEYAEGGSLYNELQ 84
            T     LV  Y   GS+ + L+
Sbjct: 105 MTPTERLLVYPYMANGSVASCLR 127

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 5   SKIVGQGAFGVVWK------GLWQNQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIV 56
           ++I+G G FG V K      GL     +A K I+T    +++    E+  ++++ H N++
Sbjct: 94  TEILGGGRFGQVHKCEETATGL----KLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNEL 83
           +LY A  + N + LVMEY +GG L++ +
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRI 177

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 7   IVGQGAFGVVWKG-LWQNQYVAVKHIETEAERKA---FAVEVRQLSRVSHPNIVKLYGAC 62
           I+G+G FG V+KG L     VAVK ++ E  +     F  EV  +S   H N+++L G C
Sbjct: 37  ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 63  -TGNPVCLVMEYAEGGSLYNELQ 84
            T     LV  Y   GS+ + L+
Sbjct: 97  MTPTERLLVYPYMANGSVASCLR 119

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 17  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 75
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 76  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 21  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQ 84
           G C       + L+MEY   GSL + LQ
Sbjct: 81  GVCYSAGRRNLKLIMEYLPYGSLRDYLQ 108

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 8   VGQGAFGVVWKGLWQNQYVAV----KHIETEAERKA--FAVEVRQLSRVSHPNIVKLYGA 61
           +G GAFG V+K   QN+  +V    K I+T++E +   + VE+  L+   HPNIVKL  A
Sbjct: 45  LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 62  C-TGNPVCLVMEYAEGGSL 79
               N + +++E+  GG++
Sbjct: 103 FYYENNLWILIEFCAGGAV 121

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 8   VGQGAFGVVWKGLWQNQYVAV----KHIETEAERKA--FAVEVRQLSRVSHPNIVKLYGA 61
           +G GAFG V+K   QN+  +V    K I+T++E +   + VE+  L+   HPNIVKL  A
Sbjct: 45  LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 62  C-TGNPVCLVMEYAEGGSL 79
               N + +++E+  GG++
Sbjct: 103 FYYENNLWILIEFCAGGAV 121

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 8   VGQGAFGVVWKGLWQNQYVAV----KHIETEAERKA--FAVEVRQLSRVSHPNIVKLYGA 61
           +G GAFG V+K   QN+  +V    K I+T++E +   + VE+  L+   HPNIVKL  A
Sbjct: 45  LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 62  C-TGNPVCLVMEYAEGGSL 79
               N + +++E+  GG++
Sbjct: 103 FYYENNLWILIEFCAGGAV 121

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 18  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 76
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 77  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 118

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 81  RLLGICLTSTVQLITQLMPFGXLLD 105

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 14  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 72
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 73  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 46  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 106 RLLGICLTSTVQLITQLMPFGCLLD 130

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 14  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 13  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 71
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 72  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 113

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 14  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 72
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 73  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 17  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 75
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 76  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 17  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 75
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 76  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 81  RLLGICLTSTVQLITQLMPFGCLLD 105

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 81  RLLGICLTSTVQLITQLMPFGCLLD 105

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 18  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 78  RLLGICLTSTVQLITQLMPFGCLLD 102

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 84  RLLGICLTSTVQLITQLMPFGCLLD 108

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 84  RLLGICLTSTVQLITQLMPFGCLLD 108

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 83  RLLGICLTSTVQLITQLMPFGCLLD 107

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 84  RLLGICLTSTVQLITQLMPFGCLLD 108

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 17  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 75
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 76  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 31  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 91  RLLGICLTSTVQLITQLMPFGCLLD 115

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++  GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 28  KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+M+    G L +
Sbjct: 88  RLLGICLTSTVQLIMQLMPFGCLLD 112

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 6   KIVGQGAFGVVW-----KGLWQNQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIV 56
           K++GQG+FG V+      G    Q  A+K ++       +R    +E   L  V+HP IV
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 57  KL-YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           KL Y   T   + L++++  GG L+  L +    + +  K YL
Sbjct: 90  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 6   KIVGQGAFGV--VWKGLWQNQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
           K +G G FGV  + +    N+ VAVK+IE  E   +    E+     + HPNIV+     
Sbjct: 24  KDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 83
Query: 63  -TGNPVCLVMEYAEGGSLYNEL 83
            T   + +VMEYA GG L+  +
Sbjct: 84  LTPTHLAIVMEYASGGELFERI 105

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 6   KIVGQGAFGV--VWKGLWQNQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
           K +G G FGV  + +    N+ VAVK+IE  E   +    E+     + HPNIV+     
Sbjct: 25  KDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 63  -TGNPVCLVMEYAEGGSLYNEL 83
            T   + +VMEYA GG L+  +
Sbjct: 85  LTPTHLAIVMEYASGGELFERI 106

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 6   KIVGQGAFGV--VWKGLWQNQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
           K +G G FGV  + +    N+ VAVK+IE  E   +    E+     + HPNIV+     
Sbjct: 25  KDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 63  -TGNPVCLVMEYAEGGSLYNEL 83
            T   + +VMEYA GG L+  +
Sbjct: 85  LTPTHLAIVMEYASGGELFERI 106

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q +++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 11  RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 69
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 70  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 111

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 83  RLLGICLTSTVQLITQLMPFGCLLD 107

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 27  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 87  RLLGICLTSTVQLITQLMPFGCLLD 111

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 6   KIVGQGAFGVVW-----KGLWQNQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIV 56
           K++GQG+FG V+      G    Q  A+K ++       +R    +E   L  V+HP IV
Sbjct: 31  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 57  KL-YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           KL Y   T   + L++++  GG L+  L +    + +  K YL
Sbjct: 91  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 133

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 28  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 88  RLLGICLTSTVQLITQLMPFGCLLD 112

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 28  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 88  RLLGICLTSTVQLITQLMPFGCLLD 112

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 14  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 15  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 73
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 74  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 15  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 73
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 74  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 6   KIVGQGAFGVV--WKGLWQNQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKL 58
           K +G+G F  V   + +   + VAVK I+       + +K F  EVR +  ++HPNIVKL
Sbjct: 21  KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL 79
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNEL 83
           +    T   + LVMEYA GG +++ L
Sbjct: 80  FEVIETEKTLYLVMEYASGGEVFDYL 105

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 15  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 75  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 14  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 17  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 77  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 19  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 79  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 19  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G +Y ELQ+ S    +    Y+
Sbjct: 79  YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 17  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 75
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 76  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 14  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 14  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G FG V+     QN+++ A+K      +E E        E+   S + HPNI+++
Sbjct: 20  RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 59  YGACTGNP-VCLVMEYAEGGSLYNELQR 85
           Y        + L++E+A  G LY ELQ+
Sbjct: 80  YNYFHDRKRIYLMLEFAPRGELYKELQK 107

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
           + +G+G FG V+     Q++++    +  +A+ +   VE  QL R       + HPNI++
Sbjct: 16  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 74
Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           LYG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 75  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 19  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 79  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 16  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 76  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 81  RLLGICLTSTVQLITQLMPFGCLLD 105

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++    +  +A+ +   VE      V   S + HPNI++L
Sbjct: 19  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G +Y ELQ+ S    +    Y+
Sbjct: 79  YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++ A+K      +E          EV   S + HPNI++L
Sbjct: 19  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 79  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G FG V+     QN+++ A+K      +E E        E+   S + HPNI+++
Sbjct: 21  RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 59  YGACTGNP-VCLVMEYAEGGSLYNELQR 85
           Y        + L++E+A  G LY ELQ+
Sbjct: 81  YNYFHDRKRIYLMLEFAPRGELYKELQK 108

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++ A+K      +E          EV   S + HPNI++L
Sbjct: 31  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 91  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 131

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++ A+K      +E          EV   S + HPNI++L
Sbjct: 40  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 59  YGA-CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6   KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G FG V+     Q++++ A+K      +E          EV   S + HPNI++L
Sbjct: 40  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 59  YGA-CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 18/104 (17%)
Query: 8   VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 18  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 62  C-TGNPVCLVMEYAEGGSLYNELQRSSAAS------LKFCKIYL 98
             T N + LV E+     L+ +L++   AS      L   K YL
Sbjct: 78  IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 116

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 73 IHTENKLYLVFEF-----LHQDLKKFMDAS 97

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDAS 94

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDAS 94

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 4   GSKIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
           G +++G+G+FG  ++ K     Q  AVK      ++ + ++++   EV+ L ++ HPNI+
Sbjct: 53  GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 57  KLYGACTGNP-VCLVMEYAEGGSLYNEL 83
           KLY          LV E   GG L++E+
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEI 140

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 4   GSKIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
           G +++G+G+FG  ++ K     Q  AVK      ++ + ++++   EV+ L ++ HPNI+
Sbjct: 30  GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 57  KLYGACTGNP-VCLVMEYAEGGSLYNEL 83
           KLY          LV E   GG L++E+
Sbjct: 90  KLYEFFEDKGYFYLVGEVYTGGELFDEI 117

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 4   GSKIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
           G +++G+G+FG  ++ K     Q  AVK      ++ + ++++   EV+ L ++ HPNI+
Sbjct: 54  GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 57  KLYGACTGNP-VCLVMEYAEGGSLYNEL 83
           KLY          LV E   GG L++E+
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEI 141

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 7   IVGQGAFGVVWK------GLWQNQYVA-VKHIETEAERKAFAVEVRQLSRVSH-PNIVKL 58
           ++G+G FG V K      GL  +  +  +K   ++ + + FA E+  L ++ H PNI+ L
Sbjct: 32  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 59  YGACTGNP-VCLVMEYAEGGSLYNELQRS 86
            GAC     + L +EYA  G+L + L++S
Sbjct: 92  LGACEHRGYLYLAIEYAPHGNLLDFLRKS 120

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDAS 96

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 74 IHTENKLYLVFEF-----LHQDLKKFMDAS 98

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 73 IHTENKLYLVFEF-----LHQDLKKFMDAS 97

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 74 IHTENKLYLVFEF-----LHQDLKKFMDAS 98

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 73 IHTENKLYLVFEF-----LHQDLKKFMDAS 97

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDAS 94

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8   VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 18  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 62  C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
             T N + LV E+     L+ +L++   AS
Sbjct: 78  IHTENKLYLVFEF-----LHQDLKKFMDAS 102

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDAS 96

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 75 IHTENKLYLVFEF-----LHQDLKKFMDAS 99

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDAS 96

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 7   IVGQGAFGVVWK------GLWQNQYVA-VKHIETEAERKAFAVEVRQLSRVSH-PNIVKL 58
           ++G+G FG V K      GL  +  +  +K   ++ + + FA E+  L ++ H PNI+ L
Sbjct: 29  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 59  YGACTGNP-VCLVMEYAEGGSLYNELQRS 86
            GAC     + L +EYA  G+L + L++S
Sbjct: 89  LGACEHRGYLYLAIEYAPHGNLLDFLRKS 117

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 49  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+MEY   GSL + LQ+
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 137

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDAS 96

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDAS 94

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 75 IHTENKLYLVFEF-----LHQDLKKFMDAS 99

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 6   KIVGQGAFGVV--WKGLWQNQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKL 58
           K +G+G F  V   + +   + VA+K I+       + +K F  EVR +  ++HPNIVKL
Sbjct: 21  KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL 79
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNEL 83
           +    T   + L+MEYA GG +++ L
Sbjct: 80  FEVIETEKTLYLIMEYASGGEVFDYL 105

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 6   KIVGQGAFGVV--WKGLWQNQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKL 58
           K +G+G F  V   + +   + VA+K I+       + +K F  EVR +  ++HPNIVKL
Sbjct: 18  KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL 76
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNEL 83
           +    T   + L+MEYA GG +++ L
Sbjct: 77  FEVIETEKTLYLIMEYASGGEVFDYL 102

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+G FG V      G+ +++      VAVK ++ +A  K  +  V ++  +     H
Sbjct: 33  KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   L+      +++
Sbjct: 93  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 134

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+G FG V      G+ +++      VAVK ++ +A  K  +  V ++  +     H
Sbjct: 30  KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   L+      +++
Sbjct: 90  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 131

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+G FG V      G+ +++      VAVK ++ +A  K  +  V ++  +     H
Sbjct: 28  KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   L+      +++
Sbjct: 88  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 129

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 4   GSKIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
           G +++G+G+FG  ++ K     Q  AVK      ++ + ++++   EV+ L ++ HPNI 
Sbjct: 30  GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 57  KLYGACTGNP-VCLVMEYAEGGSLYNEL 83
           KLY          LV E   GG L++E+
Sbjct: 90  KLYEFFEDKGYFYLVGEVYTGGELFDEI 117

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 93  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 70  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 161

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 35  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 95  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 126

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 26  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 85
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 86  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 117

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 28  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 88  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 119

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVEVRQ-----LSRVSHPNIVKL 58
           + +G G+FG V   +     +Y A+K ++ E   +   VE        LS V+HP I+++
Sbjct: 12  RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
           +G       + ++M+Y EGG L++ L++S        K Y
Sbjct: 72  WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY 111

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 13/96 (13%)
Query: 2   LGGSKIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVS 51
           L   K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + 
Sbjct: 30  LNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 89
Query: 52  HP-NIVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           H  N+V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 90  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 125

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 35  KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 95  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 126

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 93  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 93  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 93  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 24  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 84  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 115

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 8   VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           +G+G FG V    +  L  N  + VAVK ++  TE   + F  E+  L  + H NIVK  
Sbjct: 21  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 60  GACTG---NPVCLVMEYAEGGSLYNELQR 85
           G C       + L+ME+   GSL   LQ+
Sbjct: 81  GVCYSAGRRNLKLIMEFLPYGSLREYLQK 109

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 35  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ +++E+ + G+L   L+
Sbjct: 95  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 126

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 6   KIVGQGAFGV--VWKGLWQNQYVAVKHIETEAE-RKAFAVEVRQLSRVSHPNIVKLYGAC 62
           K +G G FGV  + +     + VAVK+IE  A   +    E+     + HPNIV+     
Sbjct: 26  KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 63  -TGNPVCLVMEYAEGGSLYNEL 83
            T   + ++MEYA GG LY  +
Sbjct: 86  LTPTHLAIIMEYASGGELYERI 107

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 8   VGQGAFGVVWKGLWQNQY----VAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYG 60
           +G G FG V +G+++ +     VA+K ++    +A+ +    E + + ++ +P IV+L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 61  ACTGNPVCLVMEYAEGGSLYNEL 83
            C    + LVME A GG L+  L
Sbjct: 404 VCQAEALMLVMEMAGGGPLHKFL 426

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 8   VGQGAFGVVW----KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC- 62
           +G+GA  +V+    KG  Q  Y A+K ++   ++K    E+  L R+SHPNI+KL     
Sbjct: 61  LGRGATSIVYRCKQKGT-QKPY-ALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 63  TGNPVCLVMEYAEGGSLYNEL-------QRSSAASLK 92
           T   + LV+E   GG L++ +       +R +A ++K
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK 155

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L+    AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKDFMDAS 95

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 8   VGQGAFGVVWKGLWQNQY----VAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYG 60
           +G G FG V +G+++ +     VA+K ++    +A+ +    E + + ++ +P IV+L G
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 61  ACTGNPVCLVMEYAEGGSLYNEL 83
            C    + LVME A GG L+  L
Sbjct: 78  VCQAEALMLVMEMAGGGPLHKFL 100

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEYAE 75
            T N + LV E+ +
Sbjct: 74 IHTENKLYLVFEHVD 88

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L+    AS
Sbjct: 74 IHTENKLYLVFEF-----LHQDLKTFMDAS 98

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 8   VGQGAFG--VVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           +G+G+FG  ++ K     +   +K I     +  ER+    EV  L+ + HPNIV+   +
Sbjct: 32  IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 62  CTGN-PVCLVMEYAEGGSLYNEL 83
              N  + +VM+Y EGG L+  +
Sbjct: 92  FEENGSLYIVMDYCEGGDLFKRI 114

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV-----EVRQLSRVSHPNIVKLYG 60
           +G G FG V  G  Q     VAVK +  +  R    V     E++ L    HP+I+KLY 
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 61  AC-TGNPVCLVMEYAEGGSLYN 81
              T     +VMEY  GG L++
Sbjct: 79  VISTPTDFFMVMEYVSGGELFD 100

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 62 C-TGNPVCLVMEY 73
            T N + LV E+
Sbjct: 73 IHTENKLYLVFEF 85

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 24  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ ++ E+ + G+L   L+
Sbjct: 84  VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR 115

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV-----EVRQLSRVSHPNIVKLYG 60
           +G G FG V  G  Q     VAVK +  +  R    V     E++ L    HP+I+KLY 
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 61  AC-TGNPVCLVMEYAEGGSLYN 81
              T     +VMEY  GG L++
Sbjct: 79  VISTPTDFFMVMEYVSGGELFD 100

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 62 C-TGNPVCLVMEY 73
            T N + LV E+
Sbjct: 72 IHTENKLYLVFEF 84

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 24  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ ++ E+ + G+L   L+
Sbjct: 84  VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR 115

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 13/92 (14%)
Query: 6   KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
           K +G+GAFG V +    G+ +    + VAVK ++   T +E +A   E++ L  + H  N
Sbjct: 24  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
           +V L GACT  G P+ ++ E+ + G+L   L+
Sbjct: 84  VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR 115

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEY 73
            T N + LV E+
Sbjct: 74 IHTENKLYLVFEF 86

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      G+ +++      VAVK ++ +A  K  +  V ++  +     H
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   L+      +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      G+ +++      VAVK ++ +A  K  +  V ++  +     H
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   L+      +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      G+ +++      VAVK ++ +A  K  +  V ++  +     H
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   L+      +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAVEVRQ---LSRVSHPNIVKLY 59
           S I+GQGA   V++G  +      A+K     +  +   V++R+   L +++H NIVKL+
Sbjct: 14  SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 60  G---ACTGNPVCLVMEYAEGGSLYNELQRSSAA 89
                 T     L+ME+   GSLY  L+  S A
Sbjct: 74  AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA 106

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAVEVRQ---LSRVSHPNIVKLY 59
           S I+GQGA   V++G  +      A+K     +  +   V++R+   L +++H NIVKL+
Sbjct: 14  SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 60  G---ACTGNPVCLVMEYAEGGSLYNELQRSSAA 89
                 T     L+ME+   GSLY  L+  S A
Sbjct: 74  AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA 106

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEY 73
            T N + LV E+
Sbjct: 74 IHTENKLYLVFEF 86

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 53  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 113 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 145

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 8   VGQGAFGVVWKGLWQNQ--YVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           +G GAFG V+K   +      A K IET  E E + + VE+  L+   HP IVKL GA  
Sbjct: 27  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 64  GN-PVCLVMEYAEGGSL 79
            +  + +++E+  GG++
Sbjct: 87  HDGKLWIMIEFCPGGAV 103

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 8  VGQGAFGVVWKGLWQNQ--YVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          +G GAFG V+K   +      A K IET  E E + + VE+  L+   HP IVKL GA  
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 64 GN-PVCLVMEYAEGGSL 79
           +  + +++E+  GG++
Sbjct: 79 HDGKLWIMIEFCPGGAV 95

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      G+ +++      VAVK ++ +A  K  +  V ++  +     H
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   L+      +++
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      G+ +++      VAVK ++ +A  K  +  V ++  +     H
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GACT + P+ +++EYA  G+L   L+      +++
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 6   KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
           K +G+G F  V   + +   + VAVK I+     + + +K F  EVR    ++HPNIVKL
Sbjct: 20  KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKL 78
Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNEL 83
           +    T   + LV EYA GG +++ L
Sbjct: 79  FEVIETEKTLYLVXEYASGGEVFDYL 104

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 4  GSKIVGQGAFGVVWKGLWQNQY---VAVKHIETEAERKAF-AVEVRQLS---RVSHPNIV 56
          G + +G+G +GVV+K   QN Y    A+K I  E E +   +  +R++S    + H NIV
Sbjct: 6  GLEKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 57 KLYGAC-TGNPVCLVMEYAE 75
          KLY    T   + LV E+ +
Sbjct: 64 KLYDVIHTKKRLVLVFEHLD 83

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 4  GSKIVGQGAFGVVWKGLWQNQY---VAVKHIETEAERKAF-AVEVRQLS---RVSHPNIV 56
          G + +G+G +GVV+K   QN Y    A+K I  E E +   +  +R++S    + H NIV
Sbjct: 6  GLEKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 57 KLYGAC-TGNPVCLVMEYAE 75
          KLY    T   + LV E+ +
Sbjct: 64 KLYDVIHTKKRLVLVFEHLD 83

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQYVAVK---------HIETEAERKAFAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +   VK            +    K    E   ++ V +P++ 
Sbjct: 55  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 115 RLLGICLTSTVQLITQLMPFGCLLD 139

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 27  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 87  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 119

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 4  GSKIVGQGAFGVVWKGLWQNQY---VAVKHIETEAERKAF-AVEVRQLS---RVSHPNIV 56
          G + +G+G +GVV+K   QN Y    A+K I  E E +   +  +R++S    + H NIV
Sbjct: 6  GLEKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 57 KLYGAC-TGNPVCLVMEYAE 75
          KLY    T   + LV E+ +
Sbjct: 64 KLYDVIHTKKRLVLVFEHLD 83

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 33  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 93  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 125

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++  GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 21  KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 81  RLLGICLTSTVQLITQLMPFGCLLD 105

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 33  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 93  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 125

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 95  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 127

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 36  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 96  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 128

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Query: 6   KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
           K +G+GAFG V      G+ +++      VAVK ++ +A  K  +  V ++  +     H
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53  PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQ 84
            NI+ L GACT + P+ +++EYA  G+L   L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 92  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 124

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 36  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 96  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 128

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 95  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 127

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE-TEAERKAFAVEVRQLSRVS-HPNIVKLYGA 61
           ++VG G +G V+KG  +   Q  A+K ++ T  E +    E+  L + S H NI   YGA
Sbjct: 30  ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 62  -CTGNP------VCLVMEYAEGGSLYNELQRSSAASLK 92
               NP      + LVME+   GS+ + ++ +   +LK
Sbjct: 90  FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 8   VGQGAFGVVWKGLWQN--QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVK----- 57
           +G G FG V + + Q+  + VA+K    E     R+ + +E++ + +++HPN+V      
Sbjct: 23  LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 58  --LYGACTGNPVCLVMEYAEGGSLYNELQR 85
             L      +   L MEY EGG L   L +
Sbjct: 83  DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ 112

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 8   VGQGAFGVVWKGLWQN--QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVK----- 57
           +G G FG V + + Q+  + VA+K    E     R+ + +E++ + +++HPN+V      
Sbjct: 22  LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 58  --LYGACTGNPVCLVMEYAEGGSLYNELQR 85
             L      +   L MEY EGG L   L +
Sbjct: 82  DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ 111

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
            K +G G FG V KG +Q           +        A +     E   + ++ +P IV
Sbjct: 16  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           ++ G C      LVME AE G L   LQ++     K
Sbjct: 76  RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 111

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 95  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 127

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
            K +G G FG V KG +Q           +        A +     E   + ++ +P IV
Sbjct: 16  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           ++ G C      LVME AE G L   LQ++     K
Sbjct: 76  RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 111

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 6   KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
           K++  GAFG V+KGLW  +       VA+K +      KA      E   ++ V +P++ 
Sbjct: 28  KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYN 81
           +L G C  + V L+ +    G L +
Sbjct: 88  RLLGICLTSTVQLITQLMPFGCLLD 112

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
            K +G G FG V KG +Q           +        A +     E   + ++ +P IV
Sbjct: 10  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           ++ G C      LVME AE G L   LQ++     K
Sbjct: 70  RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 105

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 34  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 94  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 126

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 95  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 127

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
            K +G G FG V KG +Q           +        A +     E   + ++ +P IV
Sbjct: 32  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           ++ G C      LVME AE G L   LQ++     K
Sbjct: 92  RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 127

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
            K +G G FG V KG +Q           +        A +     E   + ++ +P IV
Sbjct: 32  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           ++ G C      LVME AE G L   LQ++     K
Sbjct: 92  RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 127

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
            K +G G FG V KG +Q           +        A +     E   + ++ +P IV
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           ++ G C      LVME AE G L   LQ++     K
Sbjct: 72  RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 107

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 30  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 90  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 122

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
            K +G G FG V KG +Q           +        A +     E   + ++ +P IV
Sbjct: 30  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           ++ G C      LVME AE G L   LQ++     K
Sbjct: 90  RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 125

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 6   KIVGQGAFGVVW------KGLWQNQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIV 56
           + +G+G FG V       +G    + VAVK ++ E+     A    E+  L  + H NIV
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 57  KLYGACT---GNPVCLVMEYAEGGSLYNELQRS 86
           K  G CT   GN + L+ME+   GSL   L ++
Sbjct: 87  KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 119

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5   SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G L  N     + AVK    I    E   F  E   +   SHPN++
Sbjct: 34  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 57  KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
            L G C    G+P+ +V+ Y + G L N ++  +
Sbjct: 94  SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 126

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
            K +G G FG V KG +Q           +        A +     E   + ++ +P IV
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRS 86
           ++ G C      LVME AE G L   LQ++
Sbjct: 434 RMIGICEAESWMLVMEMAELGPLNKYLQQN 463

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
            K +G G FG V KG +Q           +        A +     E   + ++ +P IV
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           ++ G C      LVME AE G L   LQ++     K
Sbjct: 82  RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 117

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I    ETE        E+  L  ++HPNIVKL   
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEY 73
            T N + LV E+
Sbjct: 70 IHTENKLYLVFEH 82

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 6   KIVGQGAFGVVW------KGLWQNQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIV 56
           + +G+G FG V       +G    + VAVK ++ E+     A    E+  L  + H NIV
Sbjct: 15  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 57  KLYGACT---GNPVCLVMEYAEGGSLYNELQRS 86
           K  G CT   GN + L+ME+   GSL   L ++
Sbjct: 75  KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 107

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 5   SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
            K +G G FG V KG +Q           +        A +     E   + ++ +P IV
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRS 86
           ++ G C      LVME AE G L   LQ++
Sbjct: 435 RMIGICEAESWMLVMEMAELGPLNKYLQQN 464

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+  I    ETE        E+  L  ++HPNIVKL   
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+  I    ETE        E+  L  ++HPNIVKL   
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
            T N + LV E+     L+ +L++   AS
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDAS 94

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 6   KIVGQGAFGVVW-----KGLWQNQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIV 56
           K++GQG+FG V+      G    Q  A+K ++       +R    +E   L  V+HP IV
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 57  KL-YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           KL Y   T   + L++++  GG L+  L +    + +  K YL
Sbjct: 90  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 38.5 bits (88), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE----TEAERKAFAV-EVRQLSRVSHPNIVKL 58
           K +G+G F  V++   L     VA+K ++     +A+ +A  + E+  L +++HPN++K 
Sbjct: 38  KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY 97
Query: 59  YGA-CTGNPVCLVMEYAEGGSL 79
           Y +    N + +V+E A+ G L
Sbjct: 98  YASFIEDNELNIVLELADAGDL 119

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV-----EVRQLSRVSHPNIVKLYG 60
           +G G FG V  G  +     VAVK +  +  R    V     E++ L    HP+I+KLY 
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 61  A-CTGNPVCLVMEYAEGGSLYN 81
              T + + +VMEY  GG L++
Sbjct: 84  VISTPSDIFMVMEYVSGGELFD 105

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	106
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	7e-37
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-33
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-33
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-33
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-31
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-31
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-31
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	9e-31
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-30
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-30
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-29
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-29
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-29
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-27
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	8e-27
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-26
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-26
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-25
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-25
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-25
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	6e-25
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-25
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	9e-25
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-24
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-24
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-24
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-24
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-24
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-24
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-24
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-24
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-24
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-24
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-24
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-24
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	5e-24
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-24
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	6e-24
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	9e-24
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-23
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-23
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-23
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-23
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-23
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-23
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-23
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-23
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-23
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-23
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-23
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	7e-23
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	9e-23
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-22
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-22
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-22
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-22
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-22
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-22
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-22
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-22
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-22
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	5e-22
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	5e-22
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-22
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-21
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-21
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-21
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	6e-21
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	7e-21
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-20
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-20
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	8e-20
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-19
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-19
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-19
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-18
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-18
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-18
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-18
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-18
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	8e-18
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	9e-18
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-17
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-17
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-17
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	5e-17
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	7e-17
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	9e-17
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-17
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-16
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-16
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-16
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-16
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-16
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-16
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-16
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	5e-16
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	5e-16
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	6e-16
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	8e-16
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	8e-16
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	9e-16
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-15
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-15
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-15
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-15
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-15
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-15
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-15
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-15
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-15
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-15
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-15
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-15
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-15
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-15
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-15
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-15
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-15
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	9e-15
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-14
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-14
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-14
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-14
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-14
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-14
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-14
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-14
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-14
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-14
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-14
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	6e-14
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	8e-14
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	8e-14
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-13
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-13
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-13
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-13
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-13
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-13
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-13
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-13
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-13
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	6e-13
3an0_A	340	Dual specificity mitogen-activated protein kinase;	6e-13
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	8e-13
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	9e-13
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-12
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-12
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-12
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-12
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-12
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-12
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	4e-12
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	5e-12
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	6e-12
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	7e-12
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	8e-12
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-11
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-11
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-11
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-11
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-11
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-11
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-11
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-11
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-11
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-11
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-11
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-11
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	5e-11
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	6e-11
3o0g_A	292	Cell division protein kinase 5; kinase activator c	6e-11
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	7e-11
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	7e-11
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	8e-11
3rp9_A	458	Mitogen-activated protein kinase; structural genom	9e-11
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	9e-11
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-10
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-10
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-10
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-10
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-10
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-10
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-10
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	4e-10
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	9e-10
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-09
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-09
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-09
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-09
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-09
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-09
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	5e-09
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-08
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-08
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-08
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-08
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-08
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	4e-08
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-08
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	5e-08
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	6e-08
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	6e-08
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	8e-08
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-07
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-07
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-07
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-07
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-06
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-06
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-06
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	3e-06
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	5e-06
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	5e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-06
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	8e-06
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-05
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-04
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-04

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  125 bits (316), Expect = 7e-37
 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 1/81 (1%)

Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
          ++VG+GAFGVV K  W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC  N
Sbjct: 14 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 72

Query: 66 PVCLVMEYAEGGSLYNELQRS 86
          PVCLVMEYAEGGSLYN L  +
Sbjct: 73 PVCLVMEYAEGGSLYNVLHGA 93

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  117 bits (294), Expect = 1e-33
 Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           + +G G+FG V +  W    VAVK +            F  EV  + R+ HPNIV   GA
Sbjct: 43  EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102

Query: 62  CTGNPV-CLVMEYAEGGSLYNELQRSSA 88
            T  P   +V EY   GSLY  L +S A
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGA 130

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  115 bits (290), Expect = 2e-33
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 7/95 (7%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
             + +   G +WKG WQ   + VK ++    +  + + F  E  +L   SHPN++ + GA
Sbjct: 16  TKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75

Query: 62  CTGNPV---CLVMEYAEGGSLYNELQRSSAASLKF 93
           C   P     L+  +   GSLYN L   +   +  
Sbjct: 76  CQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ 110

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  115 bits (289), Expect = 3e-33
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHI------ETEAERKAFAVEVRQLSRVSHPNIVKLY 59
          +I+G G FG V++  W    VAVK        +     +    E +  + + HPNI+ L 
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72

Query: 60 GACTGNPV-CLVMEYAEGGSLYNELQR 85
          G C   P  CLVME+A GG L   L  
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSG 99

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  111 bits (279), Expect = 2e-31
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 12/93 (12%)

Query: 6   KIVGQGAFGVVWKGLW--QNQYVAVKHI---------ETEAERKAFAVEVRQLSRVSHPN 54
           K +G+G FG+V KG        VA+K +         E   + + F  EV  +S ++HPN
Sbjct: 25  KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84

Query: 55  IVKLYGACTGNPVCLVMEYAEGGSLYNELQRSS 87
           IVKLYG    NP  +VME+   G LY+ L   +
Sbjct: 85  IVKLYGLMH-NPPRMVMEFVPCGDLYHRLLDKA 116

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  110 bits (276), Expect = 6e-31
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           +++G+G FG V+ G W  + VA++ I    + E + KAF  EV    +  H N+V   GA
Sbjct: 39  ELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97

Query: 62  CTGNPV-CLVMEYAEGGSLYNELQR 85
           C   P   ++    +G +LY+ ++ 
Sbjct: 98  CMSPPHLAIITSLCKGRTLYSVVRD 122

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  109 bits (274), Expect = 9e-31
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 6/86 (6%)

Query: 4   GSKIVGQGAFGVVWKGLWQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLY 59
           G +I G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   
Sbjct: 29  GQRI-GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86

Query: 60  GACTGNPVCLVMEYAEGGSLYNELQR 85
           G  T   + +V ++ EG SLY+ L  
Sbjct: 87  GYSTAPQLAIVTQWCEGSSLYHHLHA 112

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  109 bits (274), Expect = 1e-30
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFA-VEVRQLSRVSHPNIVKLYGACTG 64
           + VG+G +G VW+G WQ + VAVK   +  E+  F   E+     + H NI+    +   
Sbjct: 14  ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73

Query: 65  NP-----VCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           +      + L+  Y E GSLY+ LQ ++  ++   +I
Sbjct: 74  SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI 110

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  107 bits (268), Expect = 1e-29
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 9/99 (9%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFA--VEVRQLSRVSHPNIVKLYGACT 63
           +++G+G +G V+KG    + VAVK + + A R+ F     + ++  + H NI +      
Sbjct: 19  ELIGRGRYGAVYKGSLDERPVAVK-VFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77

Query: 64  GNPV------CLVMEYAEGGSLYNELQRSSAASLKFCKI 96
                      LVMEY   GSL   L   ++  +  C++
Sbjct: 78  RVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL 116

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  106 bits (267), Expect = 2e-29
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFA-VEVRQLSRVSHPNIVKLYGACTG 64
           K +G+G +G VW G W+ + VAVK   T  E   F   E+ Q   + H NI+    A   
Sbjct: 43  KQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102

Query: 65  NPV-----CLVMEYAEGGSLYNELQRSSAASLKFCKI 96
                    L+ +Y E GSLY+ L+ ++  +    K+
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKL 139

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  106 bits (266), Expect = 2e-29
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFA-VEVRQLSRVSHPNIVKLYGACTG 64
           + +G+G FG VW+G W+ + VAVK   +  ER  F   E+ Q   + H NI+    A   
Sbjct: 48  ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 107

Query: 65  N-----PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
           +      + LV +Y E GSL++ L R +       K+
Sbjct: 108 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL 144

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  100 bits (252), Expect = 2e-27
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)

Query: 5   SKIVGQGAFGVVWKGLWQNQYVAVKHIETEAER-KAFAVEVRQLSRVSHPNIVKLYGACT 63
            ++  +G FG VWK    N+YVAVK    + ++      EV  L  + H NI++  GA  
Sbjct: 29  LEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88

Query: 64  GNPV-----CLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
                     L+  + E GSL + L+ +  +  + C I  
Sbjct: 89  RGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAE 128

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 99.3 bits (248), Expect = 8e-27
 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 6   KIVGQGAFGVVWKGLW--QNQYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           +++G+G FG   K       + + +K +    E  ++ F  EV+ +  + HPN++K  G 
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75

Query: 62  CT-GNPVCLVMEYAEGGSLYNELQRSS 87
                 +  + EY +GG+L   ++   
Sbjct: 76  LYKDKRLNFITEYIKGGTLRGIIKSMD 102

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 97.7 bits (244), Expect = 2e-26
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           + +G+G FG V  G ++   VAVK I+ +A  +AF  E   ++++ H N+V+L G     
Sbjct: 27  QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86

Query: 66  --PVCLVMEYAEGGSLYNELQRSSAASLKF 93
              + +V EY   GSL + L+    + L  
Sbjct: 87  KGGLYIVTEYMAKGSLVDYLRSRGRSVLGG 116

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 96.1 bits (240), Expect = 6e-26
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           + +G G FG VW G +     VAVK + +      AF  E   + ++ H  +V+LY   T
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78

Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
             P+ ++ EY E GSL + L+  S   L  
Sbjct: 79  QEPIYIITEYMENGSLVDFLKTPSGIKLTI 108

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 95.4 bits (238), Expect = 3e-25
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 6   KIVGQGAFGVVWKGLWQNQY------VAVKHI---ETEAERKAFAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +    +    K    E   ++ V +P++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRS 86
           +L G C  + V L+ +    G L + ++  
Sbjct: 81  RLLGICLTSTVQLITQLMPFGCLLDYVREH 110

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 96.4 bits (240), Expect = 5e-25
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
             +GQG FG VW G W     VA+K +       +AF  E + + ++ H  +V+LY   +
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249

Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
             P+ +V EY   GSL + L+  +   L+ 
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRL 279

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 96.3 bits (240), Expect = 5e-25
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
           + +G+G FG V  G ++   VAVK I+ +A  +AF  E   ++++ H N+V+L G     
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258

Query: 66  --PVCLVMEYAEGGSLYNELQRSSAASLKF 93
              + +V EY   GSL + L+    + L  
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGG 288

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 94.7 bits (236), Expect = 6e-25
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 11/93 (11%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVK---HIETEAERKAFAVEVRQLSRVSHPNI 55
           + +G+GAFG V++              VAVK      +   +  F  E   ++   +PNI
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112

Query: 56  VKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           VKL G C  G P+CL+ EY   G L   L+  S
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS 145

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 95.7 bits (238), Expect = 8e-25
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
             +GQG FG VW G W     VA+K +       +AF  E + + ++ H  +V+LY   +
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332

Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
             P+ +V EY   GSL + L+  +   L+ 
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRL 362

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 93.0 bits (232), Expect = 9e-25
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 6   KIVGQGAFGVVWKGLWQNQ-----YVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVK 57
           +I+G+G FG V++G++ N       VAVK      T   ++ F  E   +  + HP+IVK
Sbjct: 18  RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77

Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQR 85
           L G     P  ++ME    G L + L+R
Sbjct: 78  LIGIIEEEPTWIIMELYPYGELGHYLER 105

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 95.2 bits (237), Expect = 1e-24
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 2/90 (2%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FG VW   +     VAVK +       +AF  E   +  + H  +VKL+   T
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253

Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
             P+ ++ E+   GSL + L+    +    
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPL 283

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 93.5 bits (233), Expect = 1e-24
 Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVKHI--ETEAERKAFAVEVRQLSRVSHPNIV 56
           + +G+GAFG V+     N         VAVK +   T A RK F  E   L+ + H +IV
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80

Query: 57  KLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           K YG C  G+P+ +V EY + G L   L+   
Sbjct: 81  KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHG 112

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 93.1 bits (232), Expect = 2e-24
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 11/92 (11%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNI 55
           K +G+G FG V K    +         VAVK ++   + +E +    E   L +V+HP++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88

Query: 56  VKLYGACT-GNPVCLVMEYAEGGSLYNELQRS 86
           +KLYGAC+   P+ L++EYA+ GSL   L+ S
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 92.7 bits (231), Expect = 2e-24
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 8/88 (9%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-----VAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++ +       VA+K      +++ R+ F  E   + +  HP+IVK
Sbjct: 21  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80

Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQR 85
           L G  T NPV ++ME    G L + LQ 
Sbjct: 81  LIGVITENPVWIIMELCTLGELRSFLQV 108

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 92.3 bits (230), Expect = 2e-24
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 2   LGGSKIVGQGAFGVVWKGLWQNQY----VAVKHI---ETEAERKAFAVEVRQLSRVSHPN 54
           +   ++ G G FG V +G+++ +     VA+K +     +A+ +    E + + ++ +P 
Sbjct: 13  IADIEL-GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY 71

Query: 55  IVKLYGACTGNPVCLVMEYAEGGSLYNELQRS 86
           IV+L G C    + LVME A GG L+  L   
Sbjct: 72  IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGK 103

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 92.8 bits (231), Expect = 2e-24
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 6   KIVGQGAFGVVWKGLW------QNQYVAVKHI--ETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V    +        + VAVK +   TE   + F  E+  L  + H NIVK
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106

Query: 58  LYGACT---GNPVCLVMEYAEGGSLYNELQR 85
             G C       + L+MEY   GSL + LQ+
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK 137

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 92.3 bits (230), Expect = 3e-24
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 10/90 (11%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-----VAVK-----HIETEAERKAFAVEVRQLSRVSHPNI 55
           + +G G+FGVV +G W         VAVK      +        F  EV  +  + H N+
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83

Query: 56  VKLYGACTGNPVCLVMEYAEGGSLYNELQR 85
           ++LYG     P+ +V E A  GSL + L++
Sbjct: 84  IRLYGVVLTPPMKMVTELAPLGSLLDRLRK 113

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 92.8 bits (231), Expect = 3e-24
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 6   KIVGQGAFGVVWKGLWQNQY------VAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           K++G G FG V KG+W  +       V +K           +A    +  +  + H +IV
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78

Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRS 86
           +L G C G+ + LV +Y   GSL + +++ 
Sbjct: 79  RLLGLCPGSSLQLVTQYLPLGSLLDHVRQH 108

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 92.3 bits (230), Expect = 3e-24
 Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 4   GSKIVGQGAFGVVWKGLWQNQY----VAVKHIETEA----ERKAFAVEVRQLSRVSHPNI 55
             K +G G FG V KG +Q +     VAVK ++ EA     +     E   + ++ +P I
Sbjct: 21  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80

Query: 56  VKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           V++ G C      LVME AE G L   LQ++     K
Sbjct: 81  VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 117

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 92.4 bits (230), Expect = 4e-24
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 10/92 (10%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVKHI--ETEAERKAFAVEVRQLSRVSHPNIV 56
             +G+GAFG V+     N         VAVK +   +E+ R+ F  E   L+ + H +IV
Sbjct: 47  WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106

Query: 57  KLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           + +G CT G P+ +V EY   G L   L+   
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 138

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 91.6 bits (228), Expect = 4e-24
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 6   KIVGQGAFGVVWKGLW------QNQYVAVKHI--ETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V    +        + VAVK +   TE   + F  E+  L  + H NIVK
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75

Query: 58  LYGACT---GNPVCLVMEYAEGGSLYNELQR 85
             G C       + L+MEY   GSL + LQ+
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK 106

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 91.1 bits (227), Expect = 5e-24
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 3/84 (3%)

Query: 6  KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          + +G G FG+V  G W N+  VA+K I E     + F  E   + ++SHP +V+LYG C 
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73

Query: 64 -GNPVCLVMEYAEGGSLYNELQRS 86
             P+CLV E+ E G L + L+  
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQ 97

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 92.0 bits (229), Expect = 5e-24
 Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVK---HIETEAERKAFAVEVRQLSRVSHPNI 55
           + +GQG+FG+V++G+ +          VA+K      +  ER  F  E   +   +  ++
Sbjct: 31  RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90

Query: 56  VKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           V+L G  + G P  ++ME    G L + L+   
Sbjct: 91  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 123

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 92.0 bits (229), Expect = 6e-24
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 6   KIVGQGAFGVVWKGLWQNQY------VAVKHIE---TEAERKAFAVEVRQLSRVSHPNIV 56
           K++G GAFG V+KGLW  +       VA+K +    +    K    E   ++ V +P++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 57  KLYGACTGNPVCLVMEYAEGGSLYNELQRS 86
           +L G C  + V L+ +    G L + ++  
Sbjct: 81  RLLGICLTSTVQLITQLMPFGCLLDYVREH 110

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 91.1 bits (227), Expect = 6e-24
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 6   KIVGQGAFGVVWKGLWQNQY--VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
             +G G +G V++G+W+     VAVK + E   E + F  E   +  + HPN+V+L G C
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78

Query: 63  T-GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
           T   P  ++ E+   G+L + L+  +   +  
Sbjct: 79  TREPPFYIITEFMTYGNLLDYLRECNRQEVSA 110

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 90.7 bits (226), Expect = 9e-24
 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K +G G FGVV  G W+ QY VA+K I E       F  E + +  +SH  +V+LYG CT
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89

Query: 64  -GNPVCLVMEYAEGGSLYNELQR 85
              P+ ++ EY   G L N L+ 
Sbjct: 90  KQRPIFIITEYMANGCLLNYLRE 112

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 91.2 bits (227), Expect = 1e-23
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 12/94 (12%)

Query: 6   KIVGQGAFGVVWKGLWQN------QYVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           + +G+G FG V    +        + VAVK          R  +  E+  L  + H +I+
Sbjct: 37  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96

Query: 57  KLYGACT---GNPVCLVMEYAEGGSLYNELQRSS 87
           K  G C       + LVMEY   GSL + L R S
Sbjct: 97  KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS 130

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 91.2 bits (227), Expect = 1e-23
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVK---HIETEAERKAFAVEVRQLSRVSHPNI 55
           + +G GAFG V++G             VAVK    + +E +   F +E   +S+ +H NI
Sbjct: 36  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95

Query: 56  VKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           V+  G      P  ++ME   GG L + L+ + 
Sbjct: 96  VRCIGVSLQSLPRFILMELMAGGDLKSFLRETR 128

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 93.0 bits (231), Expect = 1e-23
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 8/88 (9%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-----VAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVK 57
           + +G+G FG V +G++ +       VA+K      +++ R+ F  E   + +  HP+IVK
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455

Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQR 85
           L G  T NPV ++ME    G L + LQ 
Sbjct: 456 LIGVITENPVWIIMELCTLGELRSFLQV 483

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 91.7 bits (228), Expect = 1e-23
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVK---HIETEAERKAFAVEVRQLSRVSHPNI 55
           + +G GAFG V++G             VAVK    + +E +   F +E   +S+ +H NI
Sbjct: 77  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136

Query: 56  VKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           V+  G      P  +++E   GG L + L+ + 
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 169

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 91.2 bits (227), Expect = 1e-23
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 9/91 (9%)

Query: 6   KIVGQGAFGVVWKGLWQN----QYVAVK---HIETEAERKAFAVEVRQLSRV-SHPNIVK 57
            ++G+G FG V K   +        A+K      ++ + + FA E+  L ++  HPNI+ 
Sbjct: 31  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90

Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           L GAC     + L +EYA  G+L + L++S 
Sbjct: 91  LLGACEHRGYLYLAIEYAPHGNLLDFLRKSR 121

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 89.9 bits (224), Expect = 1e-23
 Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 6  KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          K +G G FGVV  G W+ QY VAVK I E       F  E + + ++SHP +VK YG C+
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73

Query: 64 -GNPVCLVMEYAEGGSLYNELQR 85
             P+ +V EY   G L N L+ 
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRS 96

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 90.3 bits (225), Expect = 1e-23
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 11/96 (11%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVK---HIETEAERKAFAVEVRQLSRVSHPNI 55
           + +G+  FG V+KG           Q VA+K          R+ F  E    +R+ HPN+
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74

Query: 56  VKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAAS 90
           V L G  T   P+ ++  Y   G L+  L   S  S
Sbjct: 75  VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHS 110

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 89.7 bits (223), Expect = 3e-23
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 12/92 (13%)

Query: 6   KIVGQGAFGVVWKGLW------QNQYVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
           + +G+G FG V    +        + VAVK                E+  L  + H NIV
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86

Query: 57  KLYGACT---GNPVCLVMEYAEGGSLYNELQR 85
           K  G CT   GN + L+ME+   GSL   L +
Sbjct: 87  KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK 118

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 90.4 bits (225), Expect = 4e-23
 Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 6/86 (6%)

Query: 6   KIVGQGAFGVVWKGLW--QNQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
           + +G+G FG V+ G     N  VAVK          +  F  E R L + SHPNIV+L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179

Query: 61  ACT-GNPVCLVMEYAEGGSLYNELQR 85
            CT   P+ +VME  +GG     L+ 
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRT 205

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 89.2 bits (222), Expect = 5e-23
 Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 13/94 (13%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVKHIE---TEAERKAFAVEVRQLSRV-SHPN 54
           K +G+GAFG V +            + VAVK ++   T +E +A   E++ L  +  H N
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92

Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQRS 86
           +V L GACT  G P+ +++E+ + G+L   L+  
Sbjct: 93  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 89.2 bits (222), Expect = 5e-23
 Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-------VAVKHI---ETEAERKAFAVEVRQLSRV-SHPN 54
           K +G GAFG V +              VAVK +       ER+A   E++ LS + +H N
Sbjct: 29  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88

Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           IV L GACT G P  ++ EY   G L N L+R  
Sbjct: 89  IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 122

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 88.5 bits (220), Expect = 7e-23
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 12/93 (12%)

Query: 6   KIVGQGAFGVVWKGLWQNQY---------VAVKHI--ETEAERKAFAVEVRQLSRVSHPN 54
           + +GQG F  ++KG+ +            V +K +        ++F      +S++SH +
Sbjct: 14  ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73

Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRS 86
           +V  YG C  G+   LV E+ + GSL   L+++
Sbjct: 74  LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN 106

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 90.2 bits (224), Expect = 9e-23
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 6   KIVGQGAFGVVWKGLWQNQY--VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
             +G G +G V++G+W+     VAVK + E   E + F  E   +  + HPN+V+L G C
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 285

Query: 63  T-GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
           T   P  ++ E+   G+L + L+  +   +  
Sbjct: 286 TREPPFYIITEFMTYGNLLDYLRECNRQEVSA 317

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 88.9 bits (221), Expect = 1e-22
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 12/93 (12%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVKHI---ETEAERKAFAVEVRQLSRV-SHPN 54
           K++G GAFG V                VAVK +      +ER+A   E++ ++++ SH N
Sbjct: 51  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110

Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRS 86
           IV L GACT   P+ L+ EY   G L N L+  
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 143

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 90.0 bits (223), Expect = 1e-22
 Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 8/93 (8%)

Query: 1   MLGGSKIVGQGAFGVVWKGLWQNQ----YVAVKHI---ETEAERKAFAVEVRQLSRVSHP 53
           ++   ++ G G FG V +G+++ +     VA+K +     +A+ +    E + + ++ +P
Sbjct: 338 LIADIEL-GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 396

Query: 54  NIVKLYGACTGNPVCLVMEYAEGGSLYNELQRS 86
            IV+L G C    + LVME A GG L+  L   
Sbjct: 397 YIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGK 429

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 88.1 bits (219), Expect = 2e-22
 Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVK 57
           KI+G G  G V  G  +     +  VA+K +    TE +R+ F  E   + +  HPNI++
Sbjct: 55  KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114

Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRS 86
           L G  T G    +V EY E GSL   L+  
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTH 144

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 88.6 bits (220), Expect = 2e-22
 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 14/96 (14%)

Query: 6   KIVGQGAFGVVWKGLW---------QNQYVAVKHIE---TEAERKAFAVEVRQLSRV-SH 52
           K +G+G FG V              +   VAVK ++   TE +      E+  +  +  H
Sbjct: 87  KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146

Query: 53  PNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
            NI+ L GACT   P+ +++EYA  G+L   L+   
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 182

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 87.3 bits (217), Expect = 2e-22
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 10/92 (10%)

Query: 6   KIVGQGAFGVVWKGLWQN-----QYVAVK---HIETEAERKAFAVEVRQLSRVSHPNIVK 57
           +++G+G FG V+ G   +      + AVK    I    E   F  E   +   SHPN++ 
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90

Query: 58  LYGACT--GNPVCLVMEYAEGGSLYNELQRSS 87
           L G C        +V+ Y + G L N ++  +
Sbjct: 91  LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 122

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 87.7 bits (218), Expect = 2e-22
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 12/94 (12%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-------VAVKHIE---TEAERKAFAVEVRQLSRV-SHPN 54
           K +G GAFG V +              VAVK ++      E++A   E++ +S +  H N
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111

Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
           IV L GACT G PV ++ EY   G L N L+R S
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 87.4 bits (217), Expect = 4e-22
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 10/90 (11%)

Query: 6   KIVGQGAFGVVWKGLWQN------QYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIV 56
           K++G G FG V+KG+ +         VA+K ++   TE +R  F  E   + + SH NI+
Sbjct: 50  KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109

Query: 57  KLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
           +L G  +   P+ ++ EY E G+L   L+ 
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLRE 139

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 87.0 bits (216), Expect = 4e-22
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 11/91 (12%)

Query: 6   KIVGQGAFGVVWKGLW------QNQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVK 57
             +G+G FG V    +          VAVK ++     +++ F  E++ L  +    IVK
Sbjct: 29  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88

Query: 58  LYGACT---GNPVCLVMEYAEGGSLYNELQR 85
             G         + LVMEY   G L + LQR
Sbjct: 89  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR 119

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 87.4 bits (217), Expect = 4e-22
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 9/89 (10%)

Query: 6   KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           K+VG G FG V  G  +        VA+K ++   TE +R+ F  E   + +  HPNI++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110

Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQR 85
           L G  T   PV +V EY E GSL + L++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRK 139

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 87.0 bits (216), Expect = 5e-22
 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 14/96 (14%)

Query: 6   KIVGQGAFGVVWKGLW---------QNQYVAVK---HIETEAERKAFAVEVRQLSRV-SH 52
           K +G+GAFG V              +   VAVK      TE +      E+  +  +  H
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100

Query: 53  PNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
            NI+ L GACT   P+ +++EYA  G+L   L+   
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 87.1 bits (216), Expect = 5e-22
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 10/92 (10%)

Query: 6   KIVGQGAFGVVWKGLWQN-----QYVAVK---HIETEAERKAFAVEVRQLSRVSHPNIVK 57
           +++G+G FG V+ G   +      + AVK    I    E   F  E   +   SHPN++ 
Sbjct: 95  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154

Query: 58  LYGACT--GNPVCLVMEYAEGGSLYNELQRSS 87
           L G C        +V+ Y + G L N ++  +
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 186

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 86.3 bits (214), Expect = 9e-22
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 7/87 (8%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           + +G+G+FG           +   +K I     +  ER+    EV  L+ + HPNIV+  
Sbjct: 30  QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89

Query: 60  GAC-TGNPVCLVMEYAEGGSLYNELQR 85
            +      + +VM+Y EGG L+  +  
Sbjct: 90  ESFEENGSLYIVMDYCEGGDLFKRINA 116

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 85.1 bits (211), Expect = 2e-21
 Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 8/96 (8%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
           K +G+G F  V++         VA+K ++         R     E+  L +++HPN++K 
Sbjct: 38  KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY 97

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
           Y +    N + +V+E A+ G L   ++         
Sbjct: 98  YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI 133

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 84.3 bits (209), Expect = 4e-21
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 16/98 (16%)

Query: 6   KIVGQGAFGVVWKGLWQN-----QYVAVK----HIETEAERKAFAVEVRQLSRVSHPNIV 56
           +++G+G FG V +   +        VAVK     I   ++ + F  E   +    HP++ 
Sbjct: 29  RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88

Query: 57  KLYGACT-------GNPVCLVMEYAEGGSLYNELQRSS 87
           KL G               +++ + + G L+  L  S 
Sbjct: 89  KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR 126

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 84.7 bits (210), Expect = 4e-21
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 14/96 (14%)

Query: 6   KIVGQGAFGVVWKGLWQNQY---------VAVKHIE---TEAERKAFAVEVRQLSRV-SH 52
           K +G+GAFG V                  VAVK ++   TE +      E+  +  +  H
Sbjct: 75  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134

Query: 53  PNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
            NI+ L GACT   P+ +++EYA  G+L   LQ   
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 170

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 83.5 bits (207), Expect = 6e-21
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 15/96 (15%)

Query: 6   KIVGQGAFGVVWKGLWQN-----QYVAVK----HIETEAERKAFAVEVRQLSRVSHPNIV 56
           KI+G+G FG V +G  +        VAVK       ++ E + F  E   +   SHPN++
Sbjct: 40  KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99

Query: 57  KLYGACT-GNPVC-----LVMEYAEGGSLYNELQRS 86
           +L G C   +        +++ + + G L+  L  S
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS 135

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 83.1 bits (206), Expect = 7e-21
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
             +G G++G   K       + +  K ++    TEAE++    EV  L  + HPNIV+ Y
Sbjct: 12  YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71

Query: 60  GA---CTGNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
                 T   + +VMEY EGG L + + + +      
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 82.7 bits (205), Expect = 1e-20
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 6   KIVGQGAFGVVWKGLWQNQY-----VAVK---HIETEAERKAFAVEVRQLSRVSHPNIVK 57
           +++G+G FGVV+ G + +Q       A+K    I    + +AF  E   +  ++HPN++ 
Sbjct: 27  RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86

Query: 58  LYGACT--GNPVCLVMEYAEGGSLYNELQRS 86
           L G          +++ Y   G L   ++  
Sbjct: 87  LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP 117

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 82.6 bits (204), Expect = 3e-20
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 8/88 (9%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIVKLYG 60
            I+GQGA   V++G  +      A+K     +  +   V   E   L +++H NIVKL+ 
Sbjct: 15  DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74

Query: 61  ---ACTGNPVCLVMEYAEGGSLYNELQR 85
                T     L+ME+   GSLY  L+ 
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEE 102

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 80.6 bits (199), Expect = 8e-20
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 8/88 (9%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIVKLYG 60
            I+GQGA   V++G  +      A+K     +  +   V   E   L +++H NIVKL+ 
Sbjct: 15  DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74

Query: 61  ---ACTGNPVCLVMEYAEGGSLYNELQR 85
                T     L+ME+   GSLY  L+ 
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEE 102

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 79.7 bits (197), Expect = 2e-19
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 17/97 (17%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE-TEAERKAFAVEVRQLSRVSHPNIVKLYGA- 61
            ++GQGAFG V K      ++Y A+K I  TE +      EV  L+ ++H  +V+ Y A 
Sbjct: 12  AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71

Query: 62  -------------CTGNPVCLVMEYAEGGSLYNELQR 85
                           + + + MEY E G+LY+ +  
Sbjct: 72  LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS 108

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 79.3 bits (196), Expect = 2e-19
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 11/103 (10%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
             +G+G+F  V+KGL       VA   ++    T++ER+ F  E   L  + HPNIV+ Y
Sbjct: 32  IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 91

Query: 60  GACTGNP-----VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            +          + LV E    G+L   L+R     +K  + +
Sbjct: 92  DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSW 134

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 78.1 bits (193), Expect = 5e-19
 Identities = 19/99 (19%), Positives = 41/99 (41%), Gaps = 21/99 (21%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGA-- 61
           +++G G FG V+K   +   +   +K ++     +    EV+ L+++ H NIV   G   
Sbjct: 17  ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN--NEKAEREVKALAKLDHVNIVHYNGCWD 74

Query: 62  ---------------CTGNPVCLVMEYAEGGSLYNELQR 85
                               + + ME+ + G+L   +++
Sbjct: 75  GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 77.8 bits (192), Expect = 1e-18
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 9/97 (9%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVKHI--ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           + +G+G F  V   +GL    + A+K I    + +R+    E       +HPNI++L   
Sbjct: 35  QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94

Query: 62  C-----TGNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
           C       +   L++ + + G+L+NE++R        
Sbjct: 95  CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL 131

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 78.6 bits (193), Expect = 1e-18
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 16/94 (17%)

Query: 6   KIVGQGAFGVVWKGLWQN----QYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIVKL 58
           + +G G FG V    W +    + VA+K    E   K       E++ + +++HPN+V  
Sbjct: 20  ERLGTGGFGYVL--RWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77

Query: 59  Y-------GACTGNPVCLVMEYAEGGSLYNELQR 85
                        +   L MEY EGG L   L +
Sbjct: 78  REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ 111

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 77.2 bits (191), Expect = 1e-18
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)

Query: 1   MLGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAER------KAFAVEVRQLSRVSHPN 54
           +  G   +G+G FGVV+KG   N  VAVK +    +       + F  E++ +++  H N
Sbjct: 32  ISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91

Query: 55  IVKLYGACT-GNPVCLVMEYAEGGSLYNEL 83
           +V+L G  + G+ +CLV  Y   GSL + L
Sbjct: 92  LVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 77.5 bits (191), Expect = 2e-18
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 4   GSKIVGQGAFGVVWKGL-WQN-QYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
               VG+G+FG V +    Q     AVK +  E  R     E+   + +S P IV LYGA
Sbjct: 62  HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE---ELVACAGLSSPRIVPLYGA 118

Query: 62  C-TGNPVCLVMEYAEGGSLYNELQR 85
              G  V + ME  EGGSL   +++
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQ 143

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 76.2 bits (188), Expect = 3e-18
 Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 18/98 (18%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
           + +G+G FGVV++      +   A+K I     E  R+    EV+ L+++ HP IV+ + 
Sbjct: 11  QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70

Query: 61  ACTGNP-------------VCLVMEYAEGGSLYNELQR 85
           A                  + + M+     +L + +  
Sbjct: 71  AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNG 108

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 75.3 bits (186), Expect = 8e-18
 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 7   IVGQGAFGVVWKG-LWQNQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC 62
           I+G+G FG V+KG L     VAVK ++ E        F  EV  +S   H N+++L G C
Sbjct: 37  ILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96

Query: 63  -TGNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
            T     LV  Y   GS+ + L+    +    
Sbjct: 97  MTPTERLLVYPYMANGSVASCLRERPESQPPL 128

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 74.7 bits (184), Expect = 9e-18
 Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 8/96 (8%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVS-HPNIVKL 58
           + +G G FG V+K          A+K  +       + +    EV   + +  H ++V+ 
Sbjct: 17  EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76

Query: 59  YGA-CTGNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
           + A    + + +  EY  GGSL + +  +      F
Sbjct: 77  FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYF 112

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 73.9 bits (182), Expect = 2e-17
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 6   KIVGQGAFGVVWKGL-WQN-QYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVKLYGA 61
            ++G+G +G+V+ G    N   +A+K I     R +  +  E+     + H NIV+  G+
Sbjct: 28  VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87

Query: 62  C-TGNPVCLVMEYAEGGSLYNELQR 85
                 + + ME   GGSL   L+ 
Sbjct: 88  FSENGFIKIFMEQVPGGSLSALLRS 112

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 74.3 bits (183), Expect = 3e-17
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 7/82 (8%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
            ++G+G+FG V K       Q  AVK I        +      EV  L ++ HPNI+KL+
Sbjct: 28  CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87

Query: 60  GAC-TGNPVCLVMEYAEGGSLY 80
                 +   +V E   GG L+
Sbjct: 88  EILEDSSSFYIVGELYTGGELF 109

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 73.5 bits (181), Expect = 4e-17
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC- 62
             +G+GA  +V++   +   +  A+K ++   ++K    E+  L R+SHPNI+KL     
Sbjct: 59  SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFE 118

Query: 63  TGNPVCLVMEYAEGGSL 79
           T   + LV+E   GG L
Sbjct: 119 TPTEISLVLELVTGGEL 135

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 73.4 bits (180), Expect = 5e-17
 Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 13/94 (13%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVK---HIETEAERKAFAVEVRQLSRV-SHPN 54
           K +G+GAFG V +            + VAVK      T +E +A   E++ L  +  H N
Sbjct: 28  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87

Query: 55  IVKLYGACT--GNPVCLVMEYAEGGSLYNELQRS 86
           +V L GACT  G P+ +++E+ + G+L   L+  
Sbjct: 88  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 121

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 72.7 bits (179), Expect = 7e-17
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI----ETEAERKAFAVEVRQLSRV-SHPNIVKL 58
             +G G++G V+K   +   +  AVK          +R     EV    +V  HP  V+L
Sbjct: 63  SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122

Query: 59  YGA-CTGNPVCLVMEYAEGGSLYNELQR 85
             A   G  + L  E   G SL    + 
Sbjct: 123 EQAWEEGGILYLQTELC-GPSLQQHCEA 149

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 73.2 bits (180), Expect = 9e-17
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           K +G GA+G V        +   A+K I     + +       EV  L  + HPNI+KLY
Sbjct: 43  KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102

Query: 60  GAC-TGNPVCLVMEYAEGGSLY 80
                     LVME  +GG L+
Sbjct: 103 DFFEDKRNYYLVMECYKGGELF 124

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 72.4 bits (178), Expect = 9e-17
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 5/77 (6%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKA--FAVEVRQLSRVSHPNIVKLYGA-C 62
           +G GAFG V+K          A K IET++E +   + VE+  L+   HP IVKL GA  
Sbjct: 27  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86

Query: 63  TGNPVCLVMEYAEGGSL 79
               + +++E+  GG++
Sbjct: 87  HDGKLWIMIEFCPGGAV 103

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 72.4 bits (178), Expect = 1e-16
 Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 9/101 (8%)

Query: 6   KIVGQGAFGVVWKGL-WQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPN--IVKL 58
           K +G G    V++ L  + Q  A+K++           ++  E+  L+++   +  I++L
Sbjct: 15  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           Y    T   + +VME      L + L++  +      K Y 
Sbjct: 75  YDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYW 114

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 72.0 bits (177), Expect = 1e-16
 Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 9/101 (8%)

Query: 6   KIVGQGAFGVVWKGL-WQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPN--IVKL 58
           K +G G    V++ L  + Q  A+K++           ++  E+  L+++   +  I++L
Sbjct: 34  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           Y    T   + +VME      L + L++  +      K Y 
Sbjct: 94  YDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYW 133

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 72.0 bits (177), Expect = 2e-16
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 8/83 (9%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKL 58
           +++G+G+FG V         Q  AVK I     + + ++++   EV+ L ++ HPNI+KL
Sbjct: 32  RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91

Query: 59  YGAC-TGNPVCLVMEYAEGGSLY 80
           Y          LV E   GG L+
Sbjct: 92  YEFFEDKGYFYLVGEVYTGGELF 114

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 71.6 bits (176), Expect = 2e-16
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           + +G+GAF VV + +     Q  A   I     +  + +    E R    + HPNIV+L+
Sbjct: 17  EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76

Query: 60  GAC-TGNPVCLVMEYAEGGSLYNE 82
            +        L+ +   GG L+ +
Sbjct: 77  DSISEEGHHYLIFDLVTGGELFED 100

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 71.1 bits (175), Expect = 3e-16
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 5   SKIVGQGAFGVVWKG-LWQNQYVAVKHIETEAER--KAFAVEVRQLSRVSHPNIVKLYGA 61
             ++G G FG V+KG L     VA+K    E+ +  + F  E+  LS   HP++V L G 
Sbjct: 44  KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF 103

Query: 62  CT-GNPVCLVMEYAEGGSLYNELQRSSAASL 91
           C   N + L+ +Y E G+L   L  S   ++
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSDLPTM 134

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 71.4 bits (175), Expect = 3e-16
 Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 9/101 (8%)

Query: 6   KIVGQGAFGVVWKGL-WQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPN--IVKL 58
           K +G G    V++ L  + Q  A+K++           ++  E+  L+++   +  I++L
Sbjct: 62  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           Y    T   + +VME      L + L++  +      K Y 
Sbjct: 122 YDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYW 161

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 70.3 bits (173), Expect = 4e-16
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
            ++G+G+FG V K   +   Q  AVK I        +      EV  L ++ HPNI+KL+
Sbjct: 28  CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87

Query: 60  GAC-TGNPVCLVMEYAEGGSLYN 81
                 +   +V E   GG L++
Sbjct: 88  EILEDSSSFYIVGELYTGGELFD 110

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 70.9 bits (174), Expect = 5e-16
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 5   SKIVGQGAFGVVWKGLWQ--NQYVAVKHIE----------TEAERKAFAVEVRQLSRVSH 52
           SK +G GA G V     +   + VA++ I                     E+  L +++H
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199

Query: 53  PNIVKLYGACTGNPVCLVMEYAEGGSLYN 81
           P I+K+          +V+E  EGG L++
Sbjct: 200 PCIIKIKNFFDAEDYYIVLELMEGGELFD 228

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 70.4 bits (173), Expect = 5e-16
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           + +G+GAF VV + + +      A K I     +  + +    E R   ++ HPNIV+L+
Sbjct: 35  EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94

Query: 60  GAC-TGNPVCLVMEYAEGGSLYNEL 83
            +    +   LV +   GG L+ ++
Sbjct: 95  DSIQEESFHYLVFDLVTGGELFEDI 119

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 69.9 bits (172), Expect = 6e-16
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVKLYGA 61
          +++G GAF  V+    +   +  A+K I+     +  ++  E+  L ++ H NIV L   
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74

Query: 62 C-TGNPVCLVMEYAEGGSL 79
            +     LVM+   GG L
Sbjct: 75 YESTTHYYLVMQLVSGGEL 93

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 69.5 bits (171), Expect = 8e-16
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLY 59
          + +G+GAF VV + + +      A K I T+     + +    E R   ++ HPNIV+L+
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71

Query: 60 GAC-TGNPVCLVMEYAEGGSLYNEL 83
           +    +   LV +   GG L+ ++
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDI 96

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 69.6 bits (171), Expect = 8e-16
 Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV-EVRQLSRVSHPNIVKLYGAC 62
          + +G+G FG+V + +     +    K ++ +   +     E+  L+   H NI+ L+ + 
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70

Query: 63 -TGNPVCLVMEYAEGGSL 79
           +   + ++ E+  G  +
Sbjct: 71 ESMEELVMIFEFISGLDI 88

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 70.1 bits (172), Expect = 9e-16
 Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 2   LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVK 57
           +  ++I+G G FG V K         +A K I+T    +++    E+  ++++ H N+++
Sbjct: 91  VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150

Query: 58  LYGAC-TGNPVCLVMEYAEGGSL 79
           LY A  + N + LVMEY +GG L
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGEL 173

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 69.7 bits (171), Expect = 1e-15
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGA-CTG 64
           +G+G++G V+K       Q VA+K +  E++ +    E+  + +   P++VK YG+    
Sbjct: 37  LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96

Query: 65  NPVCLVMEYAEGGSL 79
             + +VMEY   GS+
Sbjct: 97  TDLWIVMEYCGAGSV 111

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 69.7 bits (171), Expect = 1e-15
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 11/98 (11%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIE-TEAERKAFAVEVRQLSRVS-HPNIVKLYGA 61
           ++VG G +G V+KG      Q  A+K ++ T  E +    E+  L + S H NI   YGA
Sbjct: 30  ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89

Query: 62  -------CTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
                     + + LVME+   GS+ + ++ +   +LK
Sbjct: 90  FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 69.5 bits (170), Expect = 1e-15
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%)

Query: 6   KIVGQGAFGVVWKGL--WQNQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
             +G G  GVV+K         +A K I      A R     E++ L   + P IV  YG
Sbjct: 39  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 98

Query: 61  A-CTGNPVCLVMEYAEGGSL 79
           A  +   + + ME+ +GGSL
Sbjct: 99  AFYSDGEISICMEHMDGGSL 118

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 68.9 bits (169), Expect = 1e-15
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYGA- 61
           +G+G+FG V+KG      + VA+K I   E E E +    E+  LS+   P + K YG+ 
Sbjct: 30  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89

Query: 62  CTGNPVCLVMEYAEGGSL 79
                + ++MEY  GGS 
Sbjct: 90  LKDTKLWIIMEYLGGGSA 107

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 68.1 bits (167), Expect = 3e-15
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYGA- 61
           +G GA  VV       + + VA+K I   + +        E++ +S+  HPNIV  Y + 
Sbjct: 23  IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 82

Query: 62  CTGNPVCLVMEYAEGGSLYN 81
              + + LVM+   GGS+ +
Sbjct: 83  VVKDELWLVMKLLSGGSVLD 102

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 68.2 bits (167), Expect = 3e-15
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKLYGAC- 62
           +G+G+ G+V         + VAVK ++      R+    EV  +    H N+V++Y +  
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112

Query: 63  TGNPVCLVMEYAEGGSL 79
            G  + ++ME+ +GG+L
Sbjct: 113 VGEELWVLMEFLQGGAL 129

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 68.3 bits (167), Expect = 3e-15
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 10/90 (11%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHI-------ETEAERKAFAVEVRQLSRVSHPNIV 56
             +GQG++GVV            A+K +           + +    EVR + ++ HPNI 
Sbjct: 32  GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91

Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNELQR 85
           +LY        +CLVME   GG L ++L  
Sbjct: 92  RLYEVYEDEQYICLVMELCHGGHLLDKLNV 121

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 67.6 bits (166), Expect = 4e-15
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVKLYG 60
           + +G GAFG V             +K I    ++   +    E+  L  + HPNI+K++ 
Sbjct: 28  RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87

Query: 61  AC-TGNPVCLVMEYAEGGSLY 80
                + + +VME  EGG L 
Sbjct: 88  VFEDYHNMYIVMETCEGGELL 108

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 68.1 bits (167), Expect = 4e-15
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 10/98 (10%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHI-------ETEAERKAFAVEVRQLSRVSHPNIV 56
           +++G+G F VV +       Q  AVK +             +    E      + HP+IV
Sbjct: 30  EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89

Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
           +L     +   + +V E+ +G  L  E+ + + A   +
Sbjct: 90  ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY 127

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 68.2 bits (167), Expect = 4e-15
 Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 18/93 (19%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHI---------------ETEAERKAFAVEVRQLS 48
           + +G GA+G V        +   A+K I                 E   +    E+  L 
Sbjct: 42  RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101

Query: 49  RVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLY 80
            + HPNI+KL+          LV E+ EGG L+
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELF 134

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 67.6 bits (166), Expect = 4e-15
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 11/85 (12%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHI--------ETEAERKAFAVEVRQLSRVSHPNI 55
          + +G G F +V K   +   +  A K I             R+    EV  L  + HPNI
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70

Query: 56 VKLYGAC-TGNPVCLVMEYAEGGSL 79
          + L+        V L++E   GG L
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGEL 95

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 67.6 bits (166), Expect = 4e-15
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAV-----EVRQLSRVSHPNIVKL 58
           + +G+G FG V+  +       +A+K +      KA        EV   S + HPNI++L
Sbjct: 15  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
           YG       V L++EYA  G++Y ELQ+ 
Sbjct: 75  YGYFHDATRVYLILEYAPLGTVYRELQKL 103

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 67.7 bits (166), Expect = 4e-15
 Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 11/85 (12%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI--------ETEAERKAFAVEVRQLSRVSHPNI 55
           + +G G F VV K   +      A K I             R+    EV  L  + HPN+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76

Query: 56  VKLYGAC-TGNPVCLVMEYAEGGSL 79
           + L+        V L++E   GG L
Sbjct: 77  ITLHEVYENKTDVILILELVAGGEL 101

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 67.2 bits (165), Expect = 5e-15
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G FG V+  +       +A+K      +E E        E+   S + HPNI+++
Sbjct: 20  RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
           Y        + L++E+A  G LY ELQ+ 
Sbjct: 80  YNYFHDRKRIYLMLEFAPRGELYKELQKH 108

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 67.8 bits (166), Expect = 5e-15
 Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           + +G GAFGVV + + +   +    K I T    ++     E+  ++++ HP ++ L+ A
Sbjct: 57  EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116

Query: 62  C-TGNPVCLVMEYAEGGSL 79
                 + L++E+  GG L
Sbjct: 117 FEDKYEMVLILEFLSGGEL 135

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 67.3 bits (165), Expect = 6e-15
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVKHIETE-AERKAFAV-EVRQLSRVSHPNIVKLYGAC- 62
           +GQGA G V+    +   Q VA++ +  +   +K   + E+  +    +PNIV    +  
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87

Query: 63  TGNPVCLVMEYAEGGSL 79
            G+ + +VMEY  GGSL
Sbjct: 88  VGDELWVVMEYLAGGSL 104

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 67.4 bits (165), Expect = 8e-15
 Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 20/100 (20%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAV-------------------EVRQ 46
           + + QG F  +      N++ A+K  E     K                       E++ 
Sbjct: 37  RTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQI 96

Query: 47  LSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQR 85
           ++ + +   +   G     + V ++ EY E  S+    + 
Sbjct: 97  ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEY 136

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 67.6 bits (165), Expect = 9e-15
 Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 6   KIVGQGAFGVVWKGL--WQNQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGA 61
           + +G GAFGVV +          A K + T   ++++    E++ +S + HP +V L+ A
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222

Query: 62  C-TGNPVCLVMEYAEGGSL 79
               N + ++ E+  GG L
Sbjct: 223 FEDDNEMVMIYEFMSGGEL 241

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 66.9 bits (164), Expect = 1e-14
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 5   SKIVGQGAFGVVWKGLWQ--NQYVAVKHI----------ETEAERKAFAVEVRQLSRVSH 52
           SK +G GA G V     +   + VA+K I                     E+  L +++H
Sbjct: 15  SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74

Query: 53  PNIVKLYGACTGNPVCLVMEYAEGGSLYN 81
           P I+K+          +V+E  EGG L++
Sbjct: 75  PCIIKIKNFFDAEDYYIVLELMEGGELFD 103

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 66.5 bits (163), Expect = 1e-14
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 6  KIVGQGAFGVVWKG--LWQNQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKLYGA 61
            +G+G++G V            A K I      +   F  E+  +  + HPNI++LY  
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74

Query: 62 C-TGNPVCLVMEYAEGGSLY 80
                + LVME   GG L+
Sbjct: 75 FEDNTDIYLVMELCTGGELF 94

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 66.9 bits (163), Expect = 1e-14
 Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 10/97 (10%)

Query: 6   KIVGQGAFGVVWKGLWQN-------QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIV 56
            ++G+GAF  V++    +       Q   +K  +     E       + +L        +
Sbjct: 71  HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFM 130

Query: 57  KLYGA-CTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           K Y A    N   LV E    G+L N +        K
Sbjct: 131 KFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEK 167

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 66.6 bits (163), Expect = 1e-14
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 11/85 (12%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI--------ETEAERKAFAVEVRQLSRVSHPNI 55
           + +G G F +V K   +      A K I             R+    EV  L +V HPNI
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77

Query: 56  VKLYGAC-TGNPVCLVMEYAEGGSL 79
           + L+        V L++E   GG L
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGEL 102

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 66.1 bits (162), Expect = 2e-14
 Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 11/85 (12%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI--------ETEAERKAFAVEVRQLSRVSHPNI 55
           + +G G F +V K   +      A K I             R+    EV  L +V H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77

Query: 56  VKLYGAC-TGNPVCLVMEYAEGGSL 79
           + L+        V L++E   GG L
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGEL 102

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 66.3 bits (162), Expect = 2e-14
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)

Query: 6  KIVGQGAFG-VVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGAC- 62
          KI+G G+ G VV++G +Q + VAVK +  +    A   E++ L+    HPN+++ Y +  
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM-EIKLLTESDDHPNVIRYYCSET 79

Query: 63 TGNPVCLVMEYAEGGSL 79
          T   + + +E     +L
Sbjct: 80 TDRFLYIALELC-NLNL 95

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 65.5 bits (160), Expect = 3e-14
 Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 14/90 (15%)

Query: 6   KIVGQGAFGVVWKGL--WQNQYVAVKHI----------ETEAERKAFAVEVRQLSRVS-H 52
            ++G+G   VV + +        AVK +          + E  R+A   E   L +V+ H
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159

Query: 53  PNIVKLYGAC-TGNPVCLVMEYAEGGSLYN 81
           P+I+ L  +  + + + LV +    G L++
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFD 189

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 65.0 bits (159), Expect = 4e-14
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 6   KIVGQGAFGVVWKGL--WQNQYVAVKHI---ETEAERKAFAVEVR-QLSRVSHPNIVKLY 59
             +G+GA+G V K +     Q +AVK I     E E+K   +++   +     P IV+ Y
Sbjct: 28  GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87

Query: 60  GAC-TGNPVCLVMEYAEGGSL 79
           GA        + ME       
Sbjct: 88  GALFREGDCWICMELMSTSFD 108

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 64.9 bits (159), Expect = 5e-14
 Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 8/88 (9%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G F   ++       +  A K      +    +R+  ++E+     ++H ++V  
Sbjct: 21  RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80

Query: 59  YGA-CTGNPVCLVMEYAEGGSLYNELQR 85
           +G     + V +V+E     SL    +R
Sbjct: 81  HGFFEDNDFVFVVLELCRRRSLLELHKR 108

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 65.1 bits (159), Expect = 5e-14
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 14/89 (15%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIETEA------ERKAFAVEVRQLSRVSHPNIVK 57
           K +G G FGV          + VAVK+IE  A      +R     E+     + HPNIV+
Sbjct: 26  KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQR-----EIINHRSLRHPNIVR 80

Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQR 85
                 T   + ++MEYA GG LY  +  
Sbjct: 81  FKEVILTPTHLAIIMEYASGGELYERICN 109

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 65.0 bits (159), Expect = 5e-14
 Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 8/88 (9%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G F   ++       +  A K      +    +R+  ++E+     ++H ++V  
Sbjct: 47  RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106

Query: 59  YGA-CTGNPVCLVMEYAEGGSLYNELQR 85
           +G     + V +V+E     SL    +R
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKR 134

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 64.8 bits (158), Expect = 6e-14
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 6   KIVGQGAFG-VVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGAC- 62
            ++G GA G +V++G++ N+ VAVK I  E    A   EV+ L     HPN+++ +    
Sbjct: 30  DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADR-EVQLLRESDEHPNVIRYFCTEK 88

Query: 63  TGNPVCLVMEYAEGGSLYNELQR 85
                 + +E     +L   +++
Sbjct: 89  DRQFQYIAIELC-AATLQEYVEQ 110

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 64.2 bits (157), Expect = 8e-14
 Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 5  SKIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGA 61
           K +G+G+F +  K      NQ  AVK I    E      E+  L     HPNIVKL+  
Sbjct: 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK-EITALKLCEGHPNIVKLHEV 74

Query: 62 C-TGNPVCLVMEYAEGGSL 79
                  LVME   GG L
Sbjct: 75 FHDQLHTFLVMELLNGGEL 93

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 64.2 bits (157), Expect = 8e-14
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 4  GSKIVGQGAFGVVWKG--LWQNQYVAVKHIETEA--ERKAFAVEVRQLSRVS-HPNIVKL 58
             ++G+GA   V     L  +Q  AVK IE +    R     EV  L +   H N+++L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76

Query: 59 YGAC-TGNPVCLVMEYAEGGSL 79
                 +   LV E   GGS+
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSI 98

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 64.0 bits (156), Expect = 1e-13
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
           +G G+FG V+    +  ++ VA+K +     ++  + +    EVR L ++ HPN ++  G
Sbjct: 62  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121

Query: 61  AC-TGNPVCLVMEYAEGGSL 79
                +   LVMEY  G + 
Sbjct: 122 CYLREHTAWLVMEYCLGSAS 141

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 63.4 bits (155), Expect = 1e-13
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 8  VGQGAFGVVWKGL--WQNQYVAVKHI---ETEAERKAFAVEVR-QLSRVSHPNIVKLYGA 61
          +G+GA+GVV K       Q +AVK I       E+K   +++   +  V  P  V  YGA
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74

Query: 62 C-TGNPVCLVMEYAEGGSL 79
                V + ME     SL
Sbjct: 75 LFREGDVWICMELM-DTSL 92

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 63.4 bits (155), Expect = 2e-13
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 5   SKIVGQGAFGVVWKGL--WQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSH-PNIVK 57
           SK +G+G F VV + +     Q  A K ++     +  R     E+  L      P ++ 
Sbjct: 34  SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93

Query: 58  LYGAC-TGNPVCLVMEYAEGGSL 79
           L+      + + L++EYA GG +
Sbjct: 94  LHEVYENTSEIILILEYAAGGEI 116

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 63.0 bits (154), Expect = 2e-13
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 15/93 (16%)

Query: 6   KIVGQGAFGVVWKGL--WQNQYVAVKHIET-----------EAERKAFAVEVRQLSRVS- 51
           +I+G+G   VV + +     +  AVK I+            +  R+A   EV  L +VS 
Sbjct: 23  EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82

Query: 52  HPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNEL 83
           HPNI++L     T     LV +  + G L++ L
Sbjct: 83  HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 115

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 63.1 bits (154), Expect = 2e-13
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
           K +G+G F  V     +   + VA+K I+         +    EVR +  ++HPNIVKL+
Sbjct: 21  KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80

Query: 60  GAC-TGNPVCLVMEYAEGGSLYN 81
               T   + L+MEYA GG +++
Sbjct: 81  EVIETEKTLYLIMEYASGGEVFD 103

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 6  KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIVKLYG 60
          + +G+GA+G V         + VAVK ++ +           E+     ++H N+VK YG
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72

Query: 61 AC-TGNPVCLVMEYAEGGSLYNEL 83
              GN   L +EY  GG L++ +
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI 96

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 62.3 bits (152), Expect = 4e-13
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 6  KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIVKLYG 60
          + +G+GA+G V         + VAVK ++ +           E+     ++H N+VK YG
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72

Query: 61 AC-TGNPVCLVMEYAEGGSLYNEL 83
              GN   L +EY  GG L++ +
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI 96

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 62.6 bits (152), Expect = 4e-13
 Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 9/81 (11%)

Query: 8   VGQGA--FGVVWKGL--WQNQYVAVKHIETEAERKAFAVEVRQ----LSRVSHPNIVKLY 59
           +G+G      V         +YV V+ I  EA        ++         +HPNIV   
Sbjct: 33  IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYR 92

Query: 60  GA-CTGNPVCLVMEYAEGGSL 79
                 N + +V  +   GS 
Sbjct: 93  ATFIADNELWVVTSFMAYGSA 113

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 62.4 bits (152), Expect = 4e-13
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 7/79 (8%)

Query: 8   VGQGAFGVVWKGL--WQNQYVAVKHI---ETEAERKAFAVEVRQLSR-VSHPNIVKLYGA 61
           +G G  G VWK         +AVK +     + E K   +++  + +    P IV+ +G 
Sbjct: 33  MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92

Query: 62  C-TGNPVCLVMEYAEGGSL 79
             T   V + ME     + 
Sbjct: 93  FITNTDVFIAMELMGTCAE 111

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 62.1 bits (151), Expect = 6e-13
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV-----EVRQLSRVSHPNIVKL 58
             +G G FG V  G        VAVK +  +  R    V     E++ L    HP+I+KL
Sbjct: 22  DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYN 81
           Y    T + + +VMEY  GG L++
Sbjct: 82  YQVISTPSDIFMVMEYVSGGELFD 105

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 61.6 bits (150), Expect = 8e-13
 Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 11/90 (12%)

Query: 4   GSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYG 60
             +++G G  G V +   +   Q  A+K +           EV    + S  P+IV +  
Sbjct: 33  SKQVLGLGVNGKVLECFHRRTGQKCALKLLYD---SPKARQEVDHHWQASGGPHIVCILD 89

Query: 61  AC-----TGNPVCLVMEYAEGGSLYNELQR 85
                      + ++ME  EGG L++ +Q 
Sbjct: 90  VYENMHHGKRCLLIIMECMEGGELFSRIQE 119

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 61.8 bits (150), Expect = 9e-13
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 12/84 (14%)

Query: 8   VGQGAFGVVWKGL---WQNQYVAVK---HIETEAERKAFAVEVRQLSRVSHPNIVKLY-- 59
           +  G  G ++  L      + V +K   H      +     E + L+ V HP+IV+++  
Sbjct: 88  IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNF 147

Query: 60  ---GACTGNPVC-LVMEYAEGGSL 79
                  G+PV  +VMEY  G SL
Sbjct: 148 VEHTDRHGDPVGYIVMEYVGGQSL 171

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV-----EVRQLSRVSHPNIVKL 58
            ++G+G+F  V++   +     VA+K I+ +A  KA  V     EV+   ++ HP+I++L
Sbjct: 17  NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76

Query: 59  YGA-CTGNPVCLVMEYAEGGSLYNELQR 85
           Y      N V LV+E    G +   L+ 
Sbjct: 77  YNYFEDSNYVYLVLEMCHNGEMNRYLKN 104

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 60.9 bits (148), Expect = 1e-12
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 8/80 (10%)

Query: 8   VGQGAFGVVWKGLWQ--NQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
            G       W+ L    ++ VA+       +  +   +       +LSR+  P + ++  
Sbjct: 39  HGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLD 98

Query: 61  ACTGNPVC-LVMEYAEGGSL 79
                    +V E+  GGSL
Sbjct: 99  VVHTRAGGLVVAEWIRGGSL 118

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 60.8 bits (148), Expect = 1e-12
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 5   SKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGA 61
            + +G G++ V  + + +  N   AVK I+          E+  L R   HPNI+ L   
Sbjct: 27  KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE--EIEILLRYGQHPNIITLKDV 84

Query: 62  C-TGNPVCLVMEYAEGGSLYNELQR 85
              G  V +V E  +GG L +++ R
Sbjct: 85  YDDGKYVYVVTELMKGGELLDKILR 109

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 60.7 bits (148), Expect = 1e-12
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           KI+G+G+F  V   + L  ++  A+K     HI  E +      E   +SR+ HP  VKL
Sbjct: 36  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
           Y        +   + YA+ G L   +++ 
Sbjct: 96  YFTFQDDEKLYFGLSYAKNGELLKYIRKI 124

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 60.0 bits (146), Expect = 3e-12
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 11/83 (13%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGAC 62
           +++G G  G V +   +   +  A+K ++   +      EV    R S  P+IV++    
Sbjct: 24  QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 80

Query: 63  -----TGNPVCLVMEYAEGGSLY 80
                    + +VME  +GG L+
Sbjct: 81  ENLYAGRKCLLIVMECLDGGELF 103

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 59.7 bits (145), Expect = 4e-12
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 11/83 (13%)

Query: 5   SKIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGA 61
           S+++G G  G V +       +  A+K ++   +      EV    R S  P+IV++   
Sbjct: 67  SQVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDV 123

Query: 62  C-----TGNPVCLVMEYAEGGSL 79
                     + +VME  +GG L
Sbjct: 124 YENLYAGRKCLLIVMECLDGGEL 146

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 59.7 bits (145), Expect = 4e-12
 Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 16/106 (15%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K++G G+FGVV++       + VA+K +  +   K    E++ + ++ H NIV+L     
Sbjct: 60  KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYFFY 117

Query: 64  GNP-------VCLVMEYAEGGSLYNELQRSSAA----SLKFCKIYL 98
            +        + LV++Y    ++Y   +  S A     + + K+Y+
Sbjct: 118 SSGEKKDEVYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYM 162

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 59.1 bits (144), Expect = 5e-12
 Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 18/94 (19%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVEVRQ----------LSRVSHP 53
           + +G G+FG V   +     +Y A+K +     +K   V ++Q          LS V+HP
Sbjct: 12  RTLGTGSFGRVHLIRSRHNGRYYAMKVL-----KKEIVVRLKQVEHTNDERLMLSIVTHP 66

Query: 54  NIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
            I++++G       + ++M+Y EGG L++ L++S
Sbjct: 67  FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS 100

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 59.3 bits (144), Expect = 6e-12
 Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 14/90 (15%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV----------EVRQLSRVSHP 53
             +G GAFG VW      +N+ V VK I+ E   +   +          E+  LSRV H 
Sbjct: 30  SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89

Query: 54  NIVKLYGAC-TGNPVCLVME-YAEGGSLYN 81
           NI+K+           LVME +  G  L+ 
Sbjct: 90  NIIKVLDIFENQGFFQLVMEKHGSGLDLFA 119

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 59.2 bits (144), Expect = 7e-12
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 15/83 (18%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLYGA 61
           +GQG FG V+K       Q VA+K +  E E++ F +    E++ L  + H N+V L   
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84

Query: 62  CTGNPVC---------LVMEYAE 75
           C               LV ++ E
Sbjct: 85  CRTKASPYNRCKGSIYLVFDFCE 107

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 58.4 bits (142), Expect = 8e-12
 Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 8/84 (9%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV-----EVRQLSRVSHPNIVKL 58
             +G G FG V  G        VAVK +  +  R    V     E++ L    HP+I+KL
Sbjct: 17  DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYN 81
           Y    T     +VMEY  GG L++
Sbjct: 77  YQVISTPTDFFMVMEYVSGGELFD 100

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 58.0 bits (141), Expect = 1e-11
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 13/89 (14%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV------EVRQLSRVSHPNIVK 57
           ++G+G++G V + L        AVK ++ +  R+          E++ L R+ H N+++
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70

Query: 58 LY---GACTGNPVCLVMEYAEGGSLYNEL 83
          L           + +VMEY   G    E+
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGM--QEM 97

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 57.9 bits (140), Expect = 2e-11
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 8/79 (10%)

Query: 4   GSKIVGQGAFGVVWKGLWQ----NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLY 59
           G K+ G+G +G V+K   +    ++  A+K IE      +   E+  L  + HPN++ L 
Sbjct: 26  GCKV-GRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQ 84

Query: 60  GACTG---NPVCLVMEYAE 75
                     V L+ +YAE
Sbjct: 85  KVFLSHADRKVWLLFDYAE 103

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 57.7 bits (140), Expect = 2e-11
 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 15/105 (14%)

Query: 6   KIVGQGAFGVVWKG-LWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLY----- 59
           K++G G+FGVV++  L ++  VA+K +  +   K    E++ +  V HPN+V L      
Sbjct: 46  KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK--NRELQIMRIVKHPNVVDLKAFFYS 103

Query: 60  --GACTGNPVCLVMEYAEGGSLYNELQRSSAA----SLKFCKIYL 98
                    + LV+EY    ++Y   +  +       +   K+Y+
Sbjct: 104 NGDKKDEVFLNLVLEYVP-ETVYRASRHYAKLKQTMPMLLIKLYM 147

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 8   VGQGAFGVVWKGL-WQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLYGAC 62
           VG+G +GVV+K    Q + VA+K I  +AE +        E+  L  + HPNIV L    
Sbjct: 29  VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88

Query: 63  TG-NPVCLVMEYAE 75
                + LV E+ E
Sbjct: 89  HSERCLTLVFEFME 102

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 57.8 bits (140), Expect = 2e-11
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 12/92 (13%)

Query: 6   KIVGQGAFG----VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
           K++G+GAFG    V  K    ++  A+K      +   AE   F  E   L       I 
Sbjct: 80  KVIGRGAFGEVAVVKLKN--ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWIT 137

Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNELQRSS 87
            L+ A    N + LVM+Y  GG L   L +  
Sbjct: 138 TLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFE 169

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 57.5 bits (139), Expect = 2e-11
 Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 14/101 (13%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVKHI--ETEAERKAFAVEVRQLSRVS-HPNIVKLYG 60
           +++ +G F  V+  + +   +  A+K +    E + +A   EV  + ++S HPNIV+   
Sbjct: 34  RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93

Query: 61  ACTGNP---------VCLVMEYAEGGSLYNELQRSSAASLK 92
           A +              L+ E  +G  +    +  S   L 
Sbjct: 94  AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLS 134

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLYGA 61
          +G+G +GVV+K       + VA+K I  + E +        E+  L  ++HPNIVKL   
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70

Query: 62 CTG-NPVCLVMEYAE 75
              N + LV E+  
Sbjct: 71 IHTENKLYLVFEFLH 85

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 57.3 bits (139), Expect = 3e-11
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 18/94 (19%)

Query: 6   KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVEVRQ----------LSRVSHP 53
           K +G G+FG V   K      + A+K +      K   V+++Q          L  V+ P
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLKQIEHTLNEKRILQAVNFP 101

Query: 54  NIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
            +VKL  +    + + +VMEY  GG +++ L+R 
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 56.8 bits (138), Expect = 4e-11
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 8  VGQGAFGVVWKGLWQ-NQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLYGAC 62
          +G+G +GVV+K      +  A+K I  E E +        E+  L  + H NIVKLY   
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69

Query: 63 TG-NPVCLVMEYAE 75
               + LV E+ +
Sbjct: 70 HTKKRLVLVFEHLD 83

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 56.9 bits (138), Expect = 4e-11
 Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 22/111 (19%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
           ++ GQG FG V  G  +     VA+K +    +   F       ++ L+ + HPNIV+L 
Sbjct: 29  RMAGQGTFGTVQLGKEKSTGMSVAIKKVI---QDPRFRNRELQIMQDLAVLHHPNIVQLQ 85

Query: 60  ------GACTGNPVCL--VMEYAEGGSLYNELQRSSAA----SLKFCKIYL 98
                 G      + L  VMEY    +L+   +              K++L
Sbjct: 86  SYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPILIKVFL 135

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 56.8 bits (138), Expect = 4e-11
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 16/84 (19%)

Query: 8   VGQGAFGVVWKGL---WQNQYVAVKHIETEAERKAFAV----EV---RQLSRVSHPNIVK 57
           +G+GA+G V+K        ++VA+K +  +   +   +    EV   R L    HPN+V+
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78

Query: 58  LYGACTGNP------VCLVMEYAE 75
           L+  CT +       + LV E+ +
Sbjct: 79  LFDVCTVSRTDRETKLTLVFEHVD 102

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 56.4 bits (137), Expect = 5e-11
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 18/86 (20%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV-------EV---RQLSRVSHPNI 55
           +G GA+G V+K        +VA+K +                  EV   R+L    HPN+
Sbjct: 17  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76

Query: 56  VKLYGACTGNP------VCLVMEYAE 75
           V+L   C  +       V LV E+ +
Sbjct: 77  VRLMDVCATSRTDREIKVTLVFEHVD 102

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 56.6 bits (137), Expect = 5e-11
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 12/90 (13%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
           K++G+GAF  V     K     Q  A+K      +    E   F  E   L       I 
Sbjct: 67  KVIGRGAFSEVAVVKMKQ--TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWIT 124

Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNELQR 85
           +L+ A    N + LVMEY  GG L   L +
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLLSK 154

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 56.5 bits (137), Expect = 6e-11
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 8   VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLYGA 61
           +G+G +G V+K      N+ VA+K I  E E +        EV  L  + H NI++L   
Sbjct: 42  LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101

Query: 62  CTG-NPVCLVMEYAE 75
               + + L+ EYAE
Sbjct: 102 IHHNHRLHLIFEYAE 116

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 56.0 bits (136), Expect = 6e-11
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLYGA 61
          +G+G +G V+K      ++ VA+K +  + + +        E+  L  + H NIV+L+  
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69

Query: 62 CTG-NPVCLVMEYAE 75
                + LV E+ +
Sbjct: 70 LHSDKKLTLVFEFCD 84

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 56.0 bits (136), Expect = 7e-11
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 10/78 (12%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAF------AV-EVRQLSRVSHPNIVKL 58
          +G+G F  V+K      NQ VA+K I+     +A       A+ E++ L  +SHPNI+ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77

Query: 59 YGACTGNP-VCLVMEYAE 75
            A      + LV ++ E
Sbjct: 78 LDAFGHKSNISLVFDFME 95

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 56.0 bits (136), Expect = 7e-11
 Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 24/98 (24%)

Query: 6   KIVGQGAFGVV-----WKGLWQNQYVAVK-----------HIETEAERKAFAVEVRQLSR 49
           K++GQG+FG V       G    Q  A+K            + T+ ER         L  
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER-------DILVE 82

Query: 50  VSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
           V+HP IVKL+ A  T   + L++++  GG L+  L + 
Sbjct: 83  VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE 120

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 56.0 bits (136), Expect = 8e-11
 Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 9/101 (8%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
             +G+G++GVV+K       Q VA+K      +          E+R L ++ HPN+V L 
Sbjct: 9   GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68

Query: 60  GAC-TGNPVCLVMEYAEGGSLYNELQRSSAA-SLKFCKIYL 98
                   + LV EY +  ++ +EL R          K   
Sbjct: 69  EVFRRKRRLHLVFEYCD-HTVLHELDRYQRGVPEHLVKSIT 108

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 56.0 bits (135), Expect = 9e-11
 Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 12/82 (14%)

Query: 6   KIVGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
            ++G G++G V +     + + VA+K I    E          E+  L+R++H ++VK+ 
Sbjct: 59  HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118

Query: 60  ------GACTGNPVCLVMEYAE 75
                      + + +V+E A+
Sbjct: 119 DIVIPKDVEKFDELYVVLEIAD 140

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 55.7 bits (135), Expect = 9e-11
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)

Query: 6  KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV-----EVRQLSRVSHPNIVKL 58
          + +G+G+FG V         Q VA+K I  +  +K+        E+  L  + HP+I+KL
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74

Query: 59 YGAC-TGNPVCLVMEYAEGGSLYN 81
          Y    T   + +V+EYA GG L++
Sbjct: 75 YDVITTPTDIVMVIEYA-GGELFD 97

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
            +VG+G++G+V K       + VA+K      + K        E++ L ++ H N+V L 
Sbjct: 31  GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90

Query: 60  GAC-TGNPVCLVMEYAE 75
             C       LV E+ +
Sbjct: 91  EVCKKKKRWYLVFEFVD 107

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 55.5 bits (134), Expect = 1e-10
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 6   KIVGQGAFG----VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
           K++G+GAFG    V  K     +  A+K      +   ++   F  E   ++  + P +V
Sbjct: 75  KVIGRGAFGEVQLVRHKS--TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 132

Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNELQR 85
           +L+ A      + +VMEY  GG L N +  
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSN 162

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 54.7 bits (132), Expect = 2e-10
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 13/85 (15%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV--------EVRQLSRVSH--P 53
            ++G G FG V+ G  +  N  VA+KH+E +       +        EV  L +VS    
Sbjct: 49  PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 108

Query: 54  NIVKLYGAC-TGNPVCLVMEYAEGG 77
            +++L       +   L++E  E  
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPV 133

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 16/79 (20%)

Query: 8  VGQGAFGVVWKG--LWQNQYVAVKHIETEAE--------RKAFAVEVRQLSRVSHPNIVK 57
          +G G +  V+KG       YVA+K ++ ++E        R     E+  +  + H NIV+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-----EISLMKELKHENIVR 67

Query: 58 LYGACTG-NPVCLVMEYAE 75
          LY      N + LV E+ +
Sbjct: 68 LYDVIHTENKLTLVFEFMD 86

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 54.6 bits (132), Expect = 3e-10
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 16/92 (17%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV--------EVRQLSRVS---- 51
            ++G+G FG V+ G  L     VA+K I          +        EV  L +V     
Sbjct: 37  PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG 96

Query: 52  HPNIVKLYGAC-TGNPVCLVMEYAE-GGSLYN 81
           HP +++L     T     LV+E       L++
Sbjct: 97  HPGVIRLLDWFETQEGFMLVLERPLPAQDLFD 128

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 16/79 (20%)

Query: 8  VGQGAFGVVWKGLWQ--NQYVAVKHIETEAE--------RKAFAVEVRQLSRVSHPNIVK 57
          +G+G +  V+KG  +  +  VA+K I  E E        R     EV  L  + H NIV 
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-----EVSLLKDLKHANIVT 64

Query: 58 LYGACTG-NPVCLVMEYAE 75
          L+        + LV EY +
Sbjct: 65 LHDIIHTEKSLTLVFEYLD 83

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 54.4 bits (131), Expect = 3e-10
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLY 59
          K +G G+FG+V +       +  A+K +  +   K    E+  +  + H NI+KL 
Sbjct: 13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYK--NRELDIMKVLDHVNIIKLV 66

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 53.2 bits (128), Expect = 9e-10
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
           K++G+G FG V     K     +Y A+K      I  + E      E R L    HP + 
Sbjct: 154 KLLGKGTFGKVILVKEKA--TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 211

Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNELQR 85
            L  +  T + +C VMEYA GG L+  L R
Sbjct: 212 ALKYSFQTHDRLCFVMEYANGGELFFHLSR 241

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 52.8 bits (127), Expect = 1e-09
 Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 12/82 (14%)

Query: 6   KIVGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
            ++G+G++G V+        + VA+K +    E          E+  L+R+    I++LY
Sbjct: 32  HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLY 91

Query: 60  ------GACTGNPVCLVMEYAE 75
                      + + +V+E A+
Sbjct: 92  DLIIPDDLLKFDELYIVLEIAD 113

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 14/92 (15%)

Query: 6  KIVGQGAFGVVW----KGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
          K++G+G FG V     K     +Y A+K      I  + E      E R L    HP + 
Sbjct: 11 KLLGKGTFGKVILVREKA--TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68

Query: 57 KLYGAC--TGNPVCLVMEYAEGGSLYNELQRS 86
           L      T + +C VMEYA GG L+  L R 
Sbjct: 69 ALK-YAFQTHDRLCFVMEYANGGELFFHLSRE 99

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 51.6 bits (124), Expect = 3e-09
 Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 12/91 (13%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVKHIETEA--ERKAFA---VEVRQLSRVSHPNIV 56
           + +G+G+FG V           +  A+K++  +   ER        E++ +  + HP +V
Sbjct: 21  RAIGKGSFGKVCIVQKND--TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLV 78

Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
            L+ +      + +V++   GG L   LQ++
Sbjct: 79  NLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN 109

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 51.1 bits (123), Expect = 3e-09
 Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 33/109 (30%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAV--------------------- 42
             +G+G++GVV        N Y A+K +  +   +                         
Sbjct: 19  DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG 78

Query: 43  -------EVRQLSRVSHPNIVKLY---GACTGNPVCLVMEYAEGGSLYN 81
                  E+  L ++ HPN+VKL         + + +V E    G +  
Sbjct: 79  PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME 127

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 51.1 bits (123), Expect = 4e-09
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 25/110 (22%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVK-----HIE-------TEAERKAFAVEVRQLSR 49
           K++G+G+FG V+    K    NQ+ A+K      +        T  E++  ++       
Sbjct: 23  KMLGKGSFGKVFLAEFKK--TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE---- 76

Query: 50  VSHPNIVKLYGA-CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
             HP +  ++    T   +  VMEY  GG L   +Q      L     Y 
Sbjct: 77  --HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 124

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 51.0 bits (122), Expect = 5e-09
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
           + +G+G FGVV++      +   A+K I     E  R+    EV+ L+++ HP IV+ + 
Sbjct: 12  QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 71

Query: 61  ACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
           A    P     E  +   L +E      +S  
Sbjct: 72  AWLETPPEKWQEEMDEIWLKDESTDWPLSSPS 103

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 51.0 bits (123), Expect = 5e-09
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 26/100 (26%)

Query: 6   KIVGQGAFGVV-----WKGLWQNQYVAVK------------HIE-TEAERKAFAVEVRQL 47
           +++G+G +G V       G    +  A+K                T+AER         L
Sbjct: 23  RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER-------NIL 75

Query: 48  SRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
             V HP IV L  A  TG  + L++EY  GG L+ +L+R 
Sbjct: 76  EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE 115

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 25/110 (22%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVK-----------HIE-TEAERKAFAVEVRQLSR 49
           +++G+G+FG V     K        AVK            +E T  E++  ++       
Sbjct: 29  RVLGKGSFGKVMLARVKE--TGDLYAVKVLKKDVILQDDDVECTMTEKRILSL------A 80

Query: 50  VSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            +HP + +L+    T + +  VME+  GG L   +Q+S        + Y 
Sbjct: 81  RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA 130

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 8/60 (13%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLY 59
          K +G G  G+V+  +    ++ VA+K I        +  A   E++ + R+ H NIVK++
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKH-ALR-EIKIIRRLDHDNIVKVF 74

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 27/99 (27%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVK-----------HIE-TEAERKAFAVEVRQLSR 49
            ++G+G+FG V     KG   ++  AVK            +E T  E++  A+  +    
Sbjct: 26  MVLGKGSFGKVMLSERKG--TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK---- 79

Query: 50  VSHPNIVKLYGAC--TGNPVCLVMEYAEGGSLYNELQRS 86
              P + +L+ +C  T + +  VMEY  GG L   +Q+ 
Sbjct: 80  --PPFLTQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQV 115

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 10/83 (12%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVKL 58
            +G G    V+       N  VA+K I      K      F  EV   S++SH NIV +
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76

Query: 59 Y--GACTGNPVCLVMEYAEGGSL 79
                      LVMEY EG +L
Sbjct: 77 IDVDEEDDCYY-LVMEYIEGPTL 98

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 48.6 bits (116), Expect = 3e-08
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVKHIETEA--ERKAFA---VEVRQLSRVSHPNIV 56
           +++G+G FG V     +     +  A K +E +   +RK  A    E + L +V+   +V
Sbjct: 190 RVLGKGGFGEVCACQVRA--TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVV 247

Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNELQR 85
            L  A  T + +CLV+    GG L   +  
Sbjct: 248 SLAYAYETKDALCLVLTLMNGGDLKFHIYH 277

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 15/83 (18%)

Query: 6  KIVGQGAFGVVWKGL--WQNQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKL 58
           ++G+GA+GVV         + VA+K I        A R     E++ L    H NI+ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR-TLR-EIKILKHFKHENIITI 74

Query: 59 Y------GACTGNPVCLVMEYAE 75
          +           N V ++ E  +
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQ 97

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 27/99 (27%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVK-----------HIE-TEAERKAFAVEVRQLSR 49
           K++G+G+FG V     K   +  + AVK             +   +ER      V+    
Sbjct: 44  KVIGKGSFGKVLLARHKA--EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK---- 97

Query: 50  VSHPNIVKLYGAC--TGNPVCLVMEYAEGGSLYNELQRS 86
             HP +V L+     T + +  V++Y  GG L+  LQR 
Sbjct: 98  --HPFLVGLH-FSFQTADKLYFVLDYINGGELFYHLQRE 133

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 48.2 bits (115), Expect = 4e-08
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 12/98 (12%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVKHIETEA--ERKAFA---VEVRQLSRVSHPNIV 56
           +++G+G FG V+    K     +  A K +  +   +RK +    VE + L++V    IV
Sbjct: 191 RVLGRGGFGEVFACQMKA--TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIV 248

Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
            L  A  T   +CLVM    GG +   +      +  F
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF 286

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 48.1 bits (115), Expect = 5e-08
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 14/68 (20%)

Query: 6  KIVGQGAFGVVWKGL-WQNQYVAVKHIETEAERKAFAV-------------EVRQLSRVS 51
          + +  G++G V  G+  +   VA+K +                        E+R L+   
Sbjct: 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87

Query: 52 HPNIVKLY 59
          HPNI+ L 
Sbjct: 88 HPNILGLR 95

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 47.8 bits (114), Expect = 6e-08
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 10/80 (12%)

Query: 6  KIVGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV----EVRQLSRVS-HPNIVKL 58
          K +G+GA+G+VWK +     + VAVK I    +    A     E+  L+ +S H NIV L
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74

Query: 59 YGACT---GNPVCLVMEYAE 75
                     V LV +Y E
Sbjct: 75 LNVLRADNDRDVYLVFDYME 94

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 47.7 bits (114), Expect = 6e-08
 Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 27/111 (24%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVK-----------HIE-TEAERKAFAVEVRQLSR 49
           +++G+G++  V     K    ++  A++            I+  + E+  F         
Sbjct: 58  RVIGRGSYAKVLLVRLKK--TDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE------QA 109

Query: 50  VSHPNIVKLYGAC--TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            +HP +V L+ +C  T + +  V+EY  GG L   +QR      +  + Y 
Sbjct: 110 SNHPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 159

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 47.7 bits (113), Expect = 8e-08
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 15/92 (16%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRV-SHPNI 55
            ++G+G+FG V     KG   ++  AVK      +  + + +   VE R L+     P +
Sbjct: 347 MVLGKGSFGKVMLSERKG--TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 404

Query: 56  VKLYGAC--TGNPVCLVMEYAEGGSLYNELQR 85
            +L+ +C  T + +  VMEY  GG L   +Q+
Sbjct: 405 TQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQ 435

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 16/108 (14%)

Query: 1   MLGG----SKIVGQGAFGVVWKGLWQ--NQYVAVK----HIETEAE-RKAFAVEVRQLSR 49
            L       +I+G G    V        ++ VAVK     +  +      F  E +  + 
Sbjct: 9   HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68

Query: 50  VSHPNIVKLY--GACTGNPVC---LVMEYAEGGSLYNELQRSSAASLK 92
           ++HP IV +Y  G           +VMEY +G +L + +      + K
Sbjct: 69  LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 116

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 27/110 (24%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVK-----------HIE-TEAERKAFAVEVRQLSR 49
           +++G+G++  V     K    ++  A+K            I+  + E+  F         
Sbjct: 15  RVIGRGSYAKVLLVRLKK--TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE------QA 66

Query: 50  VSHPNIVKLYGAC--TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
            +HP +V L+ +C  T + +  V+EY  GG L   +QR      +  + Y
Sbjct: 67  SNHPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 115

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 47.2 bits (112), Expect = 1e-07
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 23/109 (21%)

Query: 6   KIVGQGAFGVVW----KGLWQNQYVAVKHIE------------TEAERKAFAVEVRQLSR 49
           +I+G+G FG V+          +  A+K ++               ER   +     +S 
Sbjct: 195 RIIGRGGFGEVYGCRKAD--TGKMYAMKCLDKKRIKMKQGETLALNERIMLS----LVST 248

Query: 50  VSHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
              P IV +  A  T + +  +++   GG L+  L +    S    + Y
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 27/101 (26%)

Query: 6   KIVGQGAFGVVW-----KGLWQNQYVAVK------------HIE-TEAERKAFAVEVRQL 47
           K++G GA+G V+      G    +  A+K              E T  ER       + L
Sbjct: 60  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER-------QVL 112

Query: 48  SRVSH-PNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
             +   P +V L+ A  T   + L+++Y  GG L+  L + 
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR 153

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 45.7 bits (109), Expect = 4e-07
 Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 13/100 (13%)

Query: 1   MLGGSKI---VGQGAFGVVWKG--LWQNQYVAVK----HIETEAE-RKAFAVEVRQLSRV 50
             G  ++   VG+G  G V++     + + VA+K     + ++   R     E R   R+
Sbjct: 32  QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL 91

Query: 51  SHPNIVKLY--GACTGNPVCLVMEYAEGGSLYNELQRSSA 88
             P++V ++  G   G    + M    G  L   L+R   
Sbjct: 92  QEPHVVPIHDFGEIDGQLY-VDMRLINGVDLAAMLRRQGP 130

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 9/93 (9%)

Query: 8   VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLY----G 60
           +G+G +  V++ +    N+ V VK ++   ++K    E++ L  +   PNI+ L      
Sbjct: 44  LGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKR-EIKILENLRGGPNIITLADIVKD 102

Query: 61  ACTGNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
             +  P  LV E+          Q  +   ++F
Sbjct: 103 PVSRTPA-LVFEHVNNTDFKQLYQTLTDYDIRF 134

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 43.7 bits (103), Expect = 2e-06
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 13/83 (15%)

Query: 6   KIVGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
           K +G GA G+V        ++ VA+K +    + +  A     E+  +  V+H NI+ L 
Sbjct: 68  KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127

Query: 60  GACTGNP-------VCLVMEYAE 75
              T          V LVME  +
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMD 150

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 13/83 (15%)

Query: 6   KIVGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
           K +G GA G+V         + VA+K +    + +  A     E+  +  V+H NI+ L 
Sbjct: 31  KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90

Query: 60  GACTGNP-------VCLVMEYAE 75
              T          V +VME  +
Sbjct: 91  NVFTPQKSLEEFQDVYIVMELMD 113

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 42.8 bits (101), Expect = 3e-06
 Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 20/100 (20%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE-TEAERKAFAVEVRQLSRVS----------- 51
           + +G G F  VW    +  N +VA+K +   +   +A   E++ L RV+           
Sbjct: 25  RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 84

Query: 52  HPNIVKLYGA-----CTGNPVCLVMEYAEGGSLYNELQRS 86
             +I+KL          G  V +V E   G +L   +++ 
Sbjct: 85  ANHILKLLDHFNHKGPNGVHVVMVFE-VLGENLLALIKKY 123

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 42.3 bits (100), Expect = 5e-06
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 6  KIVGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
            VG GA+G V   +     + VA+K +    + + FA     E+  L  + H N++ L 
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 42.2 bits (99), Expect = 5e-06
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 17/95 (17%)

Query: 8   VGQGAFGVVW--KGLWQNQYVAVK-HIETEAERKAFAVEVRQLSRV-----SHPN---IV 56
           +G G F  VW    +   ++VA+K     E   +    E+R L  V     + PN   +V
Sbjct: 45  LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVV 104

Query: 57  KLYGA-----CTGNPVCLVMEYAEGGSLYNELQRS 86
           +L          G  +C+V E   G  L   + +S
Sbjct: 105 QLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKS 138

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 42.3 bits (99), Expect = 5e-06
 Identities = 13/120 (10%), Positives = 28/120 (23%), Gaps = 36/120 (30%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +  G   VV+        +  A+K        + +E +         +R+   +  + 
Sbjct: 68  EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEA 127

Query: 59  YGAC-----------TGNP----------------VCLVMEYAEG--GSLYNELQRSSAA 89
                             P                  L+M  A      L++ L      
Sbjct: 128 RDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVF 187

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 41.9 bits (99), Expect = 8e-06
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 13/83 (15%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
           + VG GA+G V   +       VA+K +    + + FA     E+R L  + H N++ L 
Sbjct: 31  QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90

Query: 60  GACTGNP-------VCLVMEYAE 75
              T +          LVM +  
Sbjct: 91  DVFTPDETLDDFTDFYLVMPFMG 113

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 9/61 (14%)

Query: 6  KIVGQGAFGVVWKGL--WQNQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKL 58
            +G+GA+G+V           VA+K I     +T  +R     E++ L R  H NI+ +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR-TLR-EIKILLRFRHENIIGI 90

Query: 59 Y 59
           
Sbjct: 91 N 91

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 21/83 (25%), Positives = 28/83 (33%), Gaps = 13/83 (15%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLY 59
             VG GA+G V           VAVK +    +    A     E+R L  + H N++ L 
Sbjct: 35  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94

Query: 60  GACTGNP-------VCLVMEYAE 75
              T          V LV     
Sbjct: 95  DVFTPARSLEEFNDVYLVTHLMG 117

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 40.4 bits (94), Expect = 3e-05
 Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 10/68 (14%)

Query: 2   LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVE--------VRQLSRVS 51
           L    ++GQ       +   Q   +   V          + A++        +R L  + 
Sbjct: 80  LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139

Query: 52  HPNIVKLY 59
           +    K++
Sbjct: 140 NQKQAKVH 147

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 40.3 bits (93), Expect = 3e-05
 Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 22/118 (18%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKA----------FAVEV---------RQ 46
           KI G+G FG V++ +  +  VA+K I  E                  E+           
Sbjct: 27  KI-GEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSG 85

Query: 47  LSRVSHPNIVKLYGA--CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWF 102
                    + L       G+   L+++  +  +             K  ++++   F
Sbjct: 86  EVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEF 143

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 8/64 (12%), Positives = 20/64 (31%), Gaps = 10/64 (15%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVE--------VRQLSRVSHPNI 55
            ++GQ       +   Q   +   V          + A++        +R L  + +   
Sbjct: 79  TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQ 138

Query: 56  VKLY 59
            K++
Sbjct: 139 AKVH 142

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 10/84 (11%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVKHIE-TEAERKAFAVEVRQLSRVSH-----PNIVK 57
           + +G G FG V     +   +Y AVK +   +   ++  +E   L ++ +      NIVK
Sbjct: 41  RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVK 100

Query: 58  LYGACT-GNPVCLVMEYAEGGSLY 80
            +G     + +CL+ E   G SLY
Sbjct: 101 YHGKFMYYDHMCLIFEPL-GPSLY 123

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	106
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.92
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.91
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.9
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.9
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.89
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.89
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.89
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.89
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.88
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.88
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.88
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.87
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.86
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.86
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.86
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.85
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.84
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.83
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.82
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.8
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.79
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.79
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.78
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.78
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.78
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.77
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.77
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.77
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.77
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.77
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.77
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.77
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.76
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.76
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.76
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.76
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.76
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.76
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.76
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.76
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.76
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.76
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.76
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.76
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.76
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.75
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.75
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.75
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.75
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.75
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.75
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.74
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.74
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.74
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.74
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.74
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.74
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.74
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.74
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.73
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.73
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.73
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.73
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.73
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.73
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.73
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.73
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.73
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.73
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.73
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.73
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.73
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.72
3bhy_A	283	Death-associated protein kinase 3; death associate	99.72
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.72
3uqc_A	286	Probable conserved transmembrane protein; structur	99.72
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.72
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.72
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.72
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.72
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.72
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.72
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.72
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.72
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.72
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.72
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.72
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.72
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.72
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.72
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.71
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.71
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.71
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.71
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.71
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.71
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.71
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.71
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.71
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.71
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.71
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.71
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.71
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.71
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.7
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.7
3niz_A	311	Rhodanese family protein; structural genomics, str	99.7
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.7
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.7
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.7
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.7
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.7
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.7
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.7
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.7
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.69
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.69
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.69
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.69
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.69
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.69
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.69
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.69
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.69
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.69
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.69
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.69
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.69
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.69
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.69
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.69
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.69
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.69
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.68
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.68
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.68
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.68
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.68
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.68
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.68
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.68
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.68
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.68
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.67
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.67
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.67
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.67
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.67
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.67
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.67
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.67
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.67
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.67
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.67
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.67
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.67
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.67
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.67
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.67
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.66
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.66
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.66
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.66
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.66
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.66
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.66
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.66
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.65
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.65
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.65
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.65
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.65
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.65
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.64
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.64
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.64
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.64
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.64
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.64
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.64
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.64
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.64
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.63
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.63
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.63
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.63
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.62
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.62
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.62
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.62
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.62
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.62
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.62
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.62
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.62
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.62
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.62
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.61
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.61
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.61
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.6
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.6
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.6
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.6
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.6
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.6
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.6
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.6
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.59
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.59
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.59
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.58
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.58
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.58
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.58
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.58
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.58
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.57
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.56
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.56
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.56
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.56
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.56
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.56
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.56
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.55
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.55
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.55
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.55
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.55
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.55
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.54
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.54
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.53
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.52
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.52
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.49
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.49
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.49
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.49
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.49
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.48
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.48
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.48
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.47
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.47
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.46
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.44
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.43
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.37
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.35
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.31
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.0
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.73
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.72
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.65
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.3
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.65
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.6
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.5
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	95.31
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.16
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	95.07
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	94.8
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	93.47
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	93.45
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	92.62
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	85.99
3ats_A	357	Putative uncharacterized protein; hypothetical pro	84.08

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.92  E-value=1.6e-25  Score=135.46  Aligned_cols=104  Identities=23%  Similarity=0.301  Sum_probs=93.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |++.+.||+|+||.||++.++  +..+|+|.++...     ....+.+|+.++..++||||+++++.+ +.+.+|+||||
T Consensus        34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy  113 (311)
T 4aw0_A           34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY  113 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence            677899999999999999987  7899999996432     245688999999999999999999999 45789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.+++++.+.+++..++.++.|++.||
T Consensus       114 ~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al  145 (311)
T 4aw0_A          114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSAL  145 (311)
T ss_dssp             CTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999888899999999999999886

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.91  E-value=3e-24  Score=131.68  Aligned_cols=104  Identities=22%  Similarity=0.313  Sum_probs=84.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |.+++.||+|+||.||++.+.  +..+|+|.++.    ....+.+.+|+.++..++||||+++++.+ ..+.+|+||||+
T Consensus        26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~  105 (350)
T 4b9d_A           26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC  105 (350)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            677899999999999999987  88999999863    23456788999999999999999999999 567899999999


Q ss_pred             CCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      +||+|.+++...+  .+++..++.++.|++.||
T Consensus       106 ~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL  138 (350)
T 4b9d_A          106 EGGDLFKRINAQKGVLFQEDQILDWFVQICLAL  138 (350)
T ss_dssp             TTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999997543  467888999999999876

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.90  E-value=4.1e-24  Score=130.93  Aligned_cols=103  Identities=23%  Similarity=0.361  Sum_probs=90.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |+..+.||+|+||.||++.++  +..+|+|.++..  ...+.+.+|+.++..++||||+++++.+ ..+.+|+||||++|
T Consensus        76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  155 (346)
T 4fih_A           76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  155 (346)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence            667889999999999999987  789999998633  2234578899999999999999999999 56889999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++.+. .+++..++.++.|++.||
T Consensus       156 g~L~~~l~~~-~l~e~~~~~~~~qi~~aL  183 (346)
T 4fih_A          156 GALTDIVTHT-RMNEEQIAAVCLAVLQAL  183 (346)
T ss_dssp             EEHHHHHHHS-CCCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence            9999999764 589999999999999876

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.90  E-value=1.2e-23  Score=125.57  Aligned_cols=103  Identities=26%  Similarity=0.414  Sum_probs=88.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |++.+.||+|+||.||++.+.  +..+|+|.++..     .....+.+|+.+++.++|||++++++++ +.+.+++||||
T Consensus        15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   94 (275)
T 3hyh_A           15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY   94 (275)
T ss_dssp             CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeC
Confidence            778899999999999999876  789999998632     2245688999999999999999999999 45789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      + +|+|.+++.+++.+++..++.++.|++.||
T Consensus        95 ~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al  125 (275)
T 3hyh_A           95 A-GNELFDYIVQRDKMSEQEARRFFQQIISAV  125 (275)
T ss_dssp             C-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHH
T ss_pred             C-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9 679999999888899999999999999886

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.89  E-value=2.3e-23  Score=125.18  Aligned_cols=103  Identities=27%  Similarity=0.394  Sum_probs=89.1

Q ss_pred             CCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-----cCceEEEE
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACT-----GNPVCLVM   71 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~lv~   71 (106)
                      +..+.||+|+||.||++.+.  +..+++|.+..    ....+.+.+|+.++..++||||+++++.+.     .+.+++||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            34467999999999999987  77899998853    234567889999999999999999999883     24589999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||++||+|.+++.+.+.+++..++.++.|++.||
T Consensus       109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL  142 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGL  142 (290)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999888899999999999999876

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.89  E-value=9.1e-24  Score=132.17  Aligned_cols=103  Identities=23%  Similarity=0.361  Sum_probs=90.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |+..+.||+|+||.||++.++  +..+|+|.++..  ...+.+.+|+.+++.++||||+++++.+ ..+.+|+|||||+|
T Consensus       153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g  232 (423)
T 4fie_A          153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  232 (423)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence            677899999999999999987  789999998632  2245578999999999999999999999 56889999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.++++.. .+++..++.++.|++.||
T Consensus       233 G~L~~~i~~~-~l~e~~~~~~~~qil~aL  260 (423)
T 4fie_A          233 GALTDIVTHT-RMNEEQIAAVCLAVLQAL  260 (423)
T ss_dssp             EEHHHHHHHS-CCCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHhcc-CCCHHHHHHHHHHHHHHH
Confidence            9999999764 588999999999999886

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.89  E-value=5.5e-24  Score=129.96  Aligned_cols=101  Identities=30%  Similarity=0.325  Sum_probs=88.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |...+.||+|+||.||++.++  +..+|+|.++....   ..+|+.++..++||||+++++.+ +.+.+|+||||++||+
T Consensus        60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~  136 (336)
T 4g3f_A           60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS  136 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred             eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc
Confidence            345678999999999999987  78999999974322   23689999999999999999999 5578999999999999


Q ss_pred             hHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++++.+.+++..++.++.|++.||
T Consensus       137 L~~~l~~~~~l~e~~~~~~~~qi~~aL  163 (336)
T 4g3f_A          137 LGQLIKQMGCLPEDRALYYLGQALEGL  163 (336)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999888899999999999999876

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.89  E-value=1.2e-22  Score=122.67  Aligned_cols=103  Identities=29%  Similarity=0.437  Sum_probs=85.2

Q ss_pred             CCceeEeecCcceEEEEEEC-------CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      .+.+.||+|+||.||++.+.       +..+|+|.++..  ...+.+.+|+.++..++||||+++++++ .++..++|||
T Consensus        16 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E   95 (299)
T 4asz_A           16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE   95 (299)
T ss_dssp             EEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence            45688999999999999864       467999998632  3456789999999999999999999999 4578999999


Q ss_pred             ecCCCChHHHHhcCC-------------CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS-------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~-------------~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.++++..+             .+++..+..++.|+..|+
T Consensus        96 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl  141 (299)
T 4asz_A           96 YMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGM  141 (299)
T ss_dssp             CCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHH
Confidence            999999999997642             477888889999998775

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.88  E-value=4.9e-24  Score=128.76  Aligned_cols=104  Identities=29%  Similarity=0.374  Sum_probs=85.8

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      |++.+.||+|+||.||.+.+.     +..+|+|.++..    .....+.+|+.++..++||||+++++.+ +.+.+|+||
T Consensus        26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm  105 (304)
T 3ubd_A           26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL  105 (304)
T ss_dssp             EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEE
T ss_pred             cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            678899999999999999863     567999988632    1223567899999999999999999999 568899999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||++||+|.+++++.+.+++..++.++.|++.||
T Consensus       106 Ey~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL  139 (304)
T 3ubd_A          106 DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL  139 (304)
T ss_dssp             CCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             EcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999888899999999999999876

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.88  E-value=4.3e-22  Score=120.19  Aligned_cols=104  Identities=22%  Similarity=0.348  Sum_probs=84.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cC----------
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GN----------   65 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~----------   65 (106)
                      |++.+.||+|+||.||++.++  +..+|+|.++.   ....+.+.+|+.++..++||||+++++.+. .+          
T Consensus         7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~   86 (299)
T 4g31_A            7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP   86 (299)
T ss_dssp             EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred             CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence            677899999999999999987  78999998852   334567889999999999999999999882 21          


Q ss_pred             --ceEEEEeecCCCChHHHHhcCCCCch---hhhhhhhhccccCC
Q psy9377          66 --PVCLVMEYAEGGSLYNELQRSSAASL---KFCKIYLPFWFSSS  105 (106)
Q Consensus        66 --~~~lv~e~~~~g~l~~~l~~~~~~~~---~~~~~~~~qll~~~  105 (106)
                        ++|++|||+++|+|.+++......++   ..+..++.|++.||
T Consensus        87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al  131 (299)
T 4g31_A           87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV  131 (299)
T ss_dssp             CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHH
Confidence              37999999999999999987665443   34678889998875

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.88  E-value=6e-22  Score=120.90  Aligned_cols=102  Identities=29%  Similarity=0.449  Sum_probs=85.7

Q ss_pred             CceeEeecCcceEEEEEEC-------CceEEEEEecC--HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      ..+.||+|+||.||++.++       +..+|+|.++.  ....+.+.+|+.++..++||||+++++++. .+..++||||
T Consensus        45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey  124 (329)
T 4aoj_A           45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY  124 (329)
T ss_dssp             EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4578999999999999864       46799999863  334567999999999999999999999994 5789999999


Q ss_pred             cCCCChHHHHhcCC---------------CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS---------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~---------------~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.++++...               +++...+..++.|+..|+
T Consensus       125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl  171 (329)
T 4aoj_A          125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM  171 (329)
T ss_dssp             CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHH
Confidence            99999999997642               466777888899988765

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.87  E-value=4.6e-22  Score=120.35  Aligned_cols=103  Identities=29%  Similarity=0.403  Sum_probs=88.0

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g   77 (106)
                      +...+.||+|+||.||++.+++ .+++|.++.    ....+.+.+|+.++..++||||+++++++..+..++||||+++|
T Consensus        38 l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~gG  116 (307)
T 3omv_A           38 VMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGS  116 (307)
T ss_dssp             CCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSSC
T ss_pred             eEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcCCCC
Confidence            3456889999999999997665 589998852    33456789999999999999999999988778899999999999


Q ss_pred             ChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++... ..+++..+..++.|++.|+
T Consensus       117 sL~~~l~~~~~~l~~~~~~~i~~qia~gL  145 (307)
T 3omv_A          117 SLYKHLHVQETKFQMFQLIDIARQTAQGM  145 (307)
T ss_dssp             BHHHHHHTSCCCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence            999999764 4688888899999998875

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.86  E-value=1e-21  Score=122.41  Aligned_cols=103  Identities=23%  Similarity=0.318  Sum_probs=90.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-------cCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-------GNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~   68 (106)
                      |.+++.||+|+||.||++.++  +..+|+|.++..    .....+.+|+.++..++||||+++++++.       .+.+|
T Consensus        56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~  135 (398)
T 4b99_A           56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY  135 (398)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred             eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence            677889999999999999987  889999999632    33466889999999999999999999872       25689


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +||||+. |+|.+++..++.+++..++.++.|++.||
T Consensus       136 ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al  171 (398)
T 4b99_A          136 VVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGL  171 (398)
T ss_dssp             EEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred             EEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999996 58999999888899999999999999886

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.86  E-value=1.3e-21  Score=118.47  Aligned_cols=103  Identities=27%  Similarity=0.355  Sum_probs=83.8

Q ss_pred             CCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEE
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVM   71 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~   71 (106)
                      +..+.||+|+||.||++.+.       +..||+|.++..   ...+.+.+|+.++..++||||+++++++. ++..++||
T Consensus        29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  108 (308)
T 4gt4_A           29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIF  108 (308)
T ss_dssp             EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEE
Confidence            34678999999999999863       467999998633   23567899999999999999999999994 57799999


Q ss_pred             eecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++|+|.++|....                .++......++.|+..|+
T Consensus       109 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl  158 (308)
T 4gt4_A          109 SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGM  158 (308)
T ss_dssp             ECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHH
T ss_pred             EcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHH
Confidence            9999999999996532                355666778888887764

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.86  E-value=1.3e-21  Score=126.54  Aligned_cols=104  Identities=23%  Similarity=0.376  Sum_probs=91.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |.+.+.||+|+||.||++.++  +..+|+|.+...  .....+.+|+.++..++||||+++++.+ ..+.++++|||++|
T Consensus       159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~g  238 (573)
T 3uto_A          159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG  238 (573)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred             cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence            677889999999999999987  789999988632  3456788999999999999999999999 45789999999999


Q ss_pred             CChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++.. .+.+++..++.++.|++.||
T Consensus       239 g~L~~~i~~~~~~l~e~~~~~~~~qi~~al  268 (573)
T 3uto_A          239 GELFEKVADEHNKMSEDEAVEYMRQVCKGL  268 (573)
T ss_dssp             CBHHHHHTCTTSCEEHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            999999975 45689999999999999875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.85  E-value=4e-21  Score=125.58  Aligned_cols=104  Identities=19%  Similarity=0.233  Sum_probs=87.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHH-----HHHHHH---HHHHHhcCCCCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE-----RKAFAV---EVRQLSRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~-----~~~~~~---~~~~~~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |.+.+.||+|+||.||.+.++  +..+|+|.++....     .....+   ++.++..++||||+++++.+ +.+.+|+|
T Consensus       191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV  270 (689)
T 3v5w_A          191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI  270 (689)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence            677899999999999999987  78999999963321     122333   35566778999999999999 45789999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||++||+|.+++.+.+.+++..++.|+.|++.||
T Consensus       271 mEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL  305 (689)
T 3v5w_A          271 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL  305 (689)
T ss_dssp             ECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999888899999999999999886

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.84  E-value=8.4e-21  Score=117.11  Aligned_cols=102  Identities=21%  Similarity=0.315  Sum_probs=88.2

Q ss_pred             CCCCceeEeecCcceEEEEEEC-----CceEEEEEecCHHHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEee
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETEAERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      .|++.+.||+|+||.||++.++     +..+|+|.+........+.+|+.++..+ .|||++++.+.+ ..+++++||||
T Consensus        22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~  101 (361)
T 4f9c_A           22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPY  101 (361)
T ss_dssp             TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEEC
T ss_pred             cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeC
Confidence            3788999999999999999764     4679999886555556678899999887 699999999999 56889999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.+++.   .+++..++.++.|++.||
T Consensus       102 ~~g~~L~~~~~---~l~~~~~~~~~~qll~al  130 (361)
T 4f9c_A          102 LEHESFLDILN---SLSFQEVREYMLNLFKAL  130 (361)
T ss_dssp             CCCCCHHHHHT---TCCHHHHHHHHHHHHHHH
T ss_pred             CCcccHHHHHc---CCCHHHHHHHHHHHHHHH
Confidence            99999999985   488999999999999886

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.83  E-value=1.5e-20  Score=113.68  Aligned_cols=102  Identities=29%  Similarity=0.409  Sum_probs=80.3

Q ss_pred             CCceeEeecCcceEEEEEECCceEEEEEecCHHHHH-HHHHHHHHHhcCCCCceeeeeeeEec-----CceEEEEeecCC
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERK-AFAVEVRQLSRVSHPNIVKLYGACTG-----NPVCLVMEYAEG   76 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~lv~e~~~~   76 (106)
                      ...+.||+|+||.||++.+.+..+|+|.++...... ....|+..+..++|||++++++.+..     ...++||||+++
T Consensus         6 ~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~   85 (303)
T 3hmm_A            6 VLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH   85 (303)
T ss_dssp             EEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred             EEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence            356889999999999999999999999997543222 22345555667899999999999832     247999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.++++... ++.+....++.|+..|+
T Consensus        86 gsL~~~l~~~~-l~~~~~~~i~~~ia~gl  113 (303)
T 3hmm_A           86 GSLFDYLNRYT-VTVEGMIKLALSTASGL  113 (303)
T ss_dssp             CBHHHHHHHCC-BCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHhCC-CCHHHHHHHHHHHHHHH
Confidence            99999998754 66777778888887664

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.82  E-value=3.8e-20  Score=113.87  Aligned_cols=104  Identities=30%  Similarity=0.406  Sum_probs=83.6

Q ss_pred             CCCceeEeecCcceEEEEEECC-------ceEEEEEecCH---HHHHHHHHHHHHHhcCCC-CceeeeeeeEe-c-CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN-------QYVAVKHIETE---AERKAFAVEVRQLSRVSH-PNIVKLYGACT-G-NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~-------~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~-~-~~~~   68 (106)
                      |++.+.||+|+||.||++.+.+       ..+++|.++..   ...+.+.+|+.++..++| |||+++++.+. + +.++
T Consensus        66 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~  145 (353)
T 4ase_A           66 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM  145 (353)
T ss_dssp             EEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCE
T ss_pred             eEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEE
Confidence            4567899999999999998652       46899988632   345678899999999976 89999999984 3 5689


Q ss_pred             EEEeecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      +|||||++|+|.++|+...                .++...+..++.|++.|+
T Consensus       146 iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl  198 (353)
T 4ase_A          146 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM  198 (353)
T ss_dssp             EEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHH
Confidence            9999999999999997532                256677778888888765

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.80  E-value=2.3e-19  Score=109.40  Aligned_cols=104  Identities=28%  Similarity=0.372  Sum_probs=91.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|||++++++.+. .+..++||||+
T Consensus        17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~   96 (328)
T 3fe3_A           17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA   96 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECC
Confidence            677899999999999999986  789999998532    34566889999999999999999999994 57799999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|+|.+++...+.+++..++.++.|++.|+
T Consensus        97 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al  127 (328)
T 3fe3_A           97 SGGEVFDYLVAHGRMKEKEARSKFRQIVSAV  127 (328)
T ss_dssp             TTCBHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999999998888899999999999998875

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.79  E-value=2.9e-19  Score=110.21  Aligned_cols=104  Identities=25%  Similarity=0.336  Sum_probs=91.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH--------HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA--------ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++...        ....+.+|+.++..++|||++++++.+. .+..+++
T Consensus        14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   93 (361)
T 2yab_A           14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI   93 (361)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEE
Confidence            677899999999999999887  7889999886321        2467889999999999999999999994 4779999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||++||+|.+++...+.+++..+..++.|++.||
T Consensus        94 ~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL  128 (361)
T 2yab_A           94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGV  128 (361)
T ss_dssp             EECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999998888899999999999998875

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.78  E-value=1.4e-18  Score=107.17  Aligned_cols=104  Identities=24%  Similarity=0.317  Sum_probs=90.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+...    .....+.+|+.++..++|||++++++.+. .+..+++|||+
T Consensus        31 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~  110 (362)
T 2bdw_A           31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV  110 (362)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecC
Confidence            567889999999999999887  788999998632    33466889999999999999999999994 57789999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|+|.+++.....+++..+..++.|++.||
T Consensus       111 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al  141 (362)
T 2bdw_A          111 TGGELFEDIVAREFYSEADASHCIQQILESI  141 (362)
T ss_dssp             CSCBHHHHHTTCSCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999999998877888999999999998875

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.78  E-value=8.6e-19  Score=110.64  Aligned_cols=104  Identities=22%  Similarity=0.284  Sum_probs=89.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+...    .....+.+|+.++..++|||++++++.+. .+..+++|||+
T Consensus        13 Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~   92 (444)
T 3soa_A           13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLV   92 (444)
T ss_dssp             EEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeC
Confidence            667899999999999999886  788999988632    23456889999999999999999999994 57899999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .||+|.+.+...+.+++..+..++.|++.||
T Consensus        93 ~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL  123 (444)
T 3soa_A           93 TGGELFEDIVAREYYSEADASHCIQQILEAV  123 (444)
T ss_dssp             BCCBHHHHHHHCSCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999888899999999999998875

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=2.2e-18  Score=104.74  Aligned_cols=104  Identities=15%  Similarity=0.266  Sum_probs=90.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+... .....+.+|+.++..++|||++++.+.+ ..+..+++|||+++|
T Consensus         7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~   86 (321)
T 1tki_A            7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL   86 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred             eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCC
Confidence            677899999999999999887  778999988643 3455678899999999999999999999 557899999999999


Q ss_pred             ChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++.... .+++..+..++.|++.|+
T Consensus        87 ~L~~~l~~~~~~~~~~~~~~i~~qi~~al  115 (321)
T 1tki_A           87 DIFERINTSAFELNEREIVSYVHQVCEAL  115 (321)
T ss_dssp             BHHHHHTSSSCCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9999998653 688889999999998875

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.77  E-value=1.7e-18  Score=104.02  Aligned_cols=104  Identities=27%  Similarity=0.281  Sum_probs=90.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+..     ......+.+|+..+..++|||++++++.+. .+..+++|||
T Consensus        13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   92 (294)
T 4eqm_A           13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEY   92 (294)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeC
Confidence            677899999999999999886  78899998742     234567889999999999999999999985 4779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++...++++...+..++.|++.|+
T Consensus        93 ~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l  124 (294)
T 4eqm_A           93 IEGPTLSEYIESHGPLSVDTAINFTNQILDGI  124 (294)
T ss_dssp             CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999888889999999999998775

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.77  E-value=1.4e-18  Score=105.78  Aligned_cols=104  Identities=24%  Similarity=0.349  Sum_probs=90.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH--------HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA--------ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....        ....+.+|+.++..++|||++++.+.+. .+..+++
T Consensus        13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   92 (326)
T 2y0a_A           13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI   92 (326)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            667889999999999999887  7889999885321        2467889999999999999999999984 4779999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++.....+++..+..++.|++.||
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al  127 (326)
T 2y0a_A           93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGV  127 (326)
T ss_dssp             EECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHH
Confidence            99999999999998877889999999999998775

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.77  E-value=2.9e-18  Score=103.70  Aligned_cols=104  Identities=32%  Similarity=0.416  Sum_probs=88.7

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~   76 (106)
                      |++.+.||+|+||.||++.+.+..+++|.+..    ......+.+|+.++..++|||++++.+.+. .+..+++|||+++
T Consensus        39 y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  118 (309)
T 3p86_A           39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR  118 (309)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTT
T ss_pred             ceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCC
Confidence            56678999999999999988899999998853    233457889999999999999999999994 5779999999999


Q ss_pred             CChHHHHhcCCC---CchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSA---ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~---~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++.....   +++..+..++.|++.||
T Consensus       119 ~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL  150 (309)
T 3p86_A          119 GSLYRLLHKSGAREQLDERRRLSMAYDVAKGM  150 (309)
T ss_dssp             CBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Confidence            999999987553   77788888888888765

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.77  E-value=1.5e-18  Score=105.45  Aligned_cols=104  Identities=26%  Similarity=0.403  Sum_probs=90.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+...  +..+++|.++...     ....+.+|..++..++|||++++++.+. ....+++|||
T Consensus         8 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~   87 (318)
T 1fot_A            8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY   87 (318)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeC
Confidence            567889999999999999886  7889999986432     2345678899999999999999999994 4779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.+++...+.+++..++.++.|++.||
T Consensus        88 ~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL  119 (318)
T 1fot_A           88 IEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL  119 (318)
T ss_dssp             CCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999888889999999999998775

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.77  E-value=1.3e-18  Score=106.45  Aligned_cols=104  Identities=30%  Similarity=0.411  Sum_probs=90.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |...+.||+|+||.||.+...  +..+++|.++...     ....+.+|..++..++|||++++.+.+. .+..+++|||
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~   86 (337)
T 1o6l_A            7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY   86 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeC
Confidence            667899999999999999887  7889999986432     2356778999999999999999999984 5789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.+++...+.+++..++.++.|++.||
T Consensus        87 ~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL  118 (337)
T 1o6l_A           87 ANGGELFFHLSRERVFTEERARFYGAEIVSAL  118 (337)
T ss_dssp             CTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999877889999999999998875

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.77  E-value=1e-18  Score=107.28  Aligned_cols=104  Identities=23%  Similarity=0.342  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~   78 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++.....+.+.+|+.++..++|||++++.+.+. .+..+++|||+++|+
T Consensus        55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  134 (349)
T 2w4o_A           55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGE  134 (349)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCC
Confidence            567789999999999999987  67899999876555566778999999999999999999994 477999999999999


Q ss_pred             hHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++...+.+++..+..++.|++.||
T Consensus       135 L~~~l~~~~~~~~~~~~~i~~qi~~~L  161 (349)
T 2w4o_A          135 LFDRIVEKGYYSERDAADAVKQILEAV  161 (349)
T ss_dssp             HHHHHTTCSSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999998877788999999999998775

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.77  E-value=7.6e-19  Score=108.28  Aligned_cols=104  Identities=29%  Similarity=0.389  Sum_probs=90.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+... .....+.+|+..+..++|||++++.+++ ..+..+++|||+.+|
T Consensus        22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~  101 (361)
T 3uc3_A           22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGG  101 (361)
T ss_dssp             EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCC
Confidence            677899999999999999987  788999988643 2345677899999999999999999999 457799999999999


Q ss_pred             ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++...+.+++..+..++.|++.||
T Consensus       102 ~L~~~l~~~~~~~~~~~~~i~~ql~~~L  129 (361)
T 3uc3_A          102 ELYERICNAGRFSEDEARFFFQQLLSGV  129 (361)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999998877899999999999998875

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.76  E-value=3.3e-18  Score=104.92  Aligned_cols=104  Identities=19%  Similarity=0.311  Sum_probs=89.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.++..     .....+.+|..++..+ +|||++++.+.+. .+..+++||
T Consensus        11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e   90 (345)
T 3a8x_A           11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE   90 (345)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEe
Confidence            567889999999999999887  788999998632     2345677888888877 8999999999984 578999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++...+.+++..++.++.|++.||
T Consensus        91 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL  123 (345)
T 3a8x_A           91 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL  123 (345)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999998877899999999999998875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.76  E-value=3.5e-18  Score=101.06  Aligned_cols=104  Identities=25%  Similarity=0.406  Sum_probs=89.4

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-c--CceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACT-G--NPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--~~~~lv~e~~   74 (106)
                      |...+.||+|+||.||++.+.+..+++|.+..    ....+.+.+|+.++..++|||++++.+.+. .  +..+++|||+
T Consensus        12 y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~   91 (271)
T 3kmu_A           12 LNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWM   91 (271)
T ss_dssp             CEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECC
T ss_pred             hHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeeccc
Confidence            66788999999999999999999999998863    234567889999999999999999999984 3  6789999999


Q ss_pred             CCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      ++|+|.+++....  .++...+..++.|++.||
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l  124 (271)
T 3kmu_A           92 PYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM  124 (271)
T ss_dssp             TTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHH
Confidence            9999999998765  377888889999988765

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.76  E-value=6.1e-18  Score=102.06  Aligned_cols=104  Identities=22%  Similarity=0.370  Sum_probs=89.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC--HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |...+.||+|+||.||++.+.  +..+++|.+..  ......+.+|+.++..++|||++++++.+ ..+..+++|||+++
T Consensus        12 ~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   91 (310)
T 3s95_A           12 LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG   91 (310)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             eeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCC
Confidence            556789999999999999987  78899998753  34566788999999999999999999998 55789999999999


Q ss_pred             CChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++.. ...++...+..++.|++.||
T Consensus        92 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~al  121 (310)
T 3s95_A           92 GTLRGIIKSMDSQYPWSQRVSFAKDIASGM  121 (310)
T ss_dssp             CBHHHHHHHCCTTSCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            999999987 45678888889999988775

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.76  E-value=1.9e-18  Score=109.90  Aligned_cols=104  Identities=26%  Similarity=0.391  Sum_probs=91.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++...     ....+.+|+.+++.++|||++++++.+. .+..+++|||
T Consensus        18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~   97 (476)
T 2y94_A           18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY   97 (476)
T ss_dssp             EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            667889999999999999887  7899999986432     2356788999999999999999999994 5779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++..++.+++..+..++.|++.|+
T Consensus        98 ~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL  129 (476)
T 2y94_A           98 VSGGELFDYICKNGRLDEKESRRLFQQILSGV  129 (476)
T ss_dssp             CSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999888899999999999998875

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.76  E-value=5.6e-18  Score=105.08  Aligned_cols=104  Identities=18%  Similarity=0.196  Sum_probs=90.4

Q ss_pred             CCCceeEeec--CcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQG--AFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g--~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |++.+.||+|  +||.||.+.+.  +..+++|.++..    .....+.+|+.+++.++|||++++.+.+ ..+..++|||
T Consensus        27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  106 (389)
T 3gni_B           27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS  106 (389)
T ss_dssp             EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEE
Confidence            6778999999  99999999987  789999998632    3346678899999999999999999998 5578999999


Q ss_pred             ecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++...  ..+++..+..++.|++.||
T Consensus       107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l  141 (389)
T 3gni_B          107 FMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL  141 (389)
T ss_dssp             CCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHH
Confidence            99999999999875  5688888999999998875

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.76  E-value=2.7e-18  Score=108.21  Aligned_cols=104  Identities=25%  Similarity=0.278  Sum_probs=88.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHH-----HHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAER-----KAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.++.....     ..+.+|..++..++|||++++.+.+. .+..++||||
T Consensus        76 y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey  155 (437)
T 4aw2_A           76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDY  155 (437)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEec
Confidence            567789999999999999987  678999998643221     23678889999999999999999984 5779999999


Q ss_pred             cCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++.. ...+++..++.++.|++.||
T Consensus       156 ~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL  188 (437)
T 4aw2_A          156 YVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI  188 (437)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence            999999999987 46788999999999998875

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.76  E-value=4.9e-18  Score=102.16  Aligned_cols=103  Identities=22%  Similarity=0.334  Sum_probs=88.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...  .....+.+|+.++..++|||++++.+.+ ..+..+++|||+++
T Consensus        22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  101 (297)
T 3fxz_A           22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  101 (297)
T ss_dssp             BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCC
Confidence            788999999999999999876  788999988532  2345678899999999999999999998 56789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++... .+++..+..++.|++.|+
T Consensus       102 ~~L~~~~~~~-~~~~~~~~~~~~qi~~~l  129 (297)
T 3fxz_A          102 GSLTDVVTET-CMDEGQIAAVCRECLQAL  129 (297)
T ss_dssp             CBHHHHHHHS-CCCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHhhc-CCCHHHHHHHHHHHHHHH
Confidence            9999999875 477888889999998775

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.76  E-value=2.3e-18  Score=105.87  Aligned_cols=104  Identities=25%  Similarity=0.342  Sum_probs=90.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.++...     ....+.+|+.++..++|||++++.+.+. .+..+++|||
T Consensus        43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  122 (350)
T 1rdq_E           43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY  122 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcC
Confidence            567789999999999999887  7899999986432     2356778999999999999999999984 5779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++...+.+++..++.++.|++.||
T Consensus       123 ~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL  154 (350)
T 1rdq_E          123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF  154 (350)
T ss_dssp             CTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999877889999999999998775

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.76  E-value=2.4e-18  Score=105.89  Aligned_cols=104  Identities=24%  Similarity=0.372  Sum_probs=89.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++...     ......+|..++..+ +|||++++++.+. .+..++|||
T Consensus        25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E  104 (353)
T 3txo_A           25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVME  104 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEe
Confidence            667889999999999999887  7889999986431     234567788888877 6999999999994 577999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |++||+|.++++..+.+++..++.++.|++.||
T Consensus       105 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL  137 (353)
T 3txo_A          105 FVNGGDLMFHIQKSRRFDEARARFYAAEIISAL  137 (353)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999888899999999999998875

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.76  E-value=2.3e-18  Score=110.01  Aligned_cols=104  Identities=23%  Similarity=0.287  Sum_probs=88.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---------------HHHHHHHHHHHHhcCCCCceeeeeeeEe-
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---------------ERKAFAVEVRQLSRVSHPNIVKLYGACT-   63 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~-   63 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....               ....+.+|+.++..++|||++++++++. 
T Consensus        38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~  117 (504)
T 3q5i_A           38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFED  117 (504)
T ss_dssp             EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            677899999999999999987  6789999886321               2356788999999999999999999994 


Q ss_pred             cCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          64 GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        64 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ....++||||+++|+|.+++.....+++..+..++.|++.||
T Consensus       118 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l  159 (504)
T 3q5i_A          118 KKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGI  159 (504)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            477999999999999999998877889999999999998875

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.76  E-value=1.5e-18  Score=107.82  Aligned_cols=104  Identities=19%  Similarity=0.285  Sum_probs=90.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....     ....+.+|+.++..++|||++++++.+. .+..+++|||
T Consensus        17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~   96 (384)
T 4fr4_A           17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDL   96 (384)
T ss_dssp             EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEec
Confidence            667889999999999999887  6789999986432     2356788999999999999999999994 5779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.||+|.+++.....+++..++.++.|++.||
T Consensus        97 ~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL  128 (384)
T 4fr4_A           97 LLGGDLRYHLQQNVHFKEETVKLFICELVMAL  128 (384)
T ss_dssp             CTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999888899999999999998875

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.76  E-value=1.9e-18  Score=106.09  Aligned_cols=104  Identities=21%  Similarity=0.342  Sum_probs=87.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-------HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-------ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++...       ....+.+|+.++..++|||++++++.+ ..+..+++|
T Consensus        26 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~  105 (351)
T 3c0i_A           26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVF  105 (351)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            667889999999999999887  7899999985321       245688999999999999999999998 457899999


Q ss_pred             eecCCCChHHHHhcC----CCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRS----SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~----~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++|+|.+++...    ..+++..+..++.|++.||
T Consensus       106 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al  143 (351)
T 3c0i_A          106 EFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL  143 (351)
T ss_dssp             ECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             eCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHH
Confidence            999999998888643    2477888889999998775

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.76  E-value=2.4e-18  Score=108.64  Aligned_cols=104  Identities=27%  Similarity=0.364  Sum_probs=89.0

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEec--CceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG--NPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~lv~e~~~~g~l   79 (106)
                      |...+.||+|+||.||.+.+.+..+++|.++.....+.+.+|+.++..++|||++++++.+..  +..+++|||+++|+|
T Consensus       195 ~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L  274 (450)
T 1k9a_A          195 LKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL  274 (450)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred             eEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence            456789999999999999999999999999765556778899999999999999999998843  478999999999999


Q ss_pred             HHHHhcCCC--CchhhhhhhhhccccCC
Q psy9377          80 YNELQRSSA--ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~~--~~~~~~~~~~~qll~~~  105 (106)
                      .++++..+.  ++......++.|++.|+
T Consensus       275 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l  302 (450)
T 1k9a_A          275 VDYLRSRGRSVLGGDCLLKFSLDVCEAM  302 (450)
T ss_dssp             HHHHHHHCTTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            999987543  57777788888888765

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.75  E-value=1.2e-18  Score=105.89  Aligned_cols=104  Identities=23%  Similarity=0.376  Sum_probs=88.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...   .....+.+|+.++..++|||++++++.+. .+..+++|||++
T Consensus         9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~   88 (323)
T 3tki_A            9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS   88 (323)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCC
Confidence            677899999999999999887  788999988532   22356788999999999999999999984 477899999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.+++.....+++..+..++.|++.||
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL  118 (323)
T 3tki_A           89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGV  118 (323)
T ss_dssp             TEEGGGGSBTTTBCCHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            999999998887889999999999998875

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.75  E-value=2.9e-18  Score=109.04  Aligned_cols=104  Identities=28%  Similarity=0.363  Sum_probs=91.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|||++++++++. .+..+++|||+
T Consensus        24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~  103 (486)
T 3mwu_A           24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY  103 (486)
T ss_dssp             EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcC
Confidence            667899999999999999987  788999998532    23466889999999999999999999994 57799999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+|+|.+.+.....+++..+..++.|++.||
T Consensus       104 ~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al  134 (486)
T 3mwu_A          104 TGGELFDEIIKRKRFSEHDAARIIKQVFSGI  134 (486)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999999998877889999999999998875

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.75  E-value=3.1e-18  Score=105.13  Aligned_cols=104  Identities=26%  Similarity=0.435  Sum_probs=88.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |.+.+.||+|+||.||.+.++  +..+++|.++...     .......|..++..+ +|||++++++.+. .+..++|||
T Consensus        19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E   98 (345)
T 1xjd_A           19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   98 (345)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEe
Confidence            567789999999999999987  7889999986432     234566777777765 8999999999994 577999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |++||+|.++++..+.+++..++.++.|++.||
T Consensus        99 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL  131 (345)
T 1xjd_A           99 YLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL  131 (345)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999877889999999999998875

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.75  E-value=4e-18  Score=106.70  Aligned_cols=103  Identities=24%  Similarity=0.297  Sum_probs=87.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHH-----HHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE-----RKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.++....     ...+.+|..++..++|||++++++.+. ....++||||
T Consensus        71 y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~  150 (410)
T 3v8s_A           71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY  150 (410)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence            567789999999999999987  67899999864322     123678899999999999999999994 5779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.++++.. .+++..++.++.|++.||
T Consensus       151 ~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL  181 (410)
T 3v8s_A          151 MPGGDLVNLMSNY-DVPEKWARFYTAEVVLAL  181 (410)
T ss_dssp             CTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence            9999999999764 588899999999998775

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.75  E-value=1.1e-17  Score=104.08  Aligned_cols=104  Identities=21%  Similarity=0.355  Sum_probs=89.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~   76 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+...  .....+.+|+.++..++|||++++.+.+. .+..+++|||+.+
T Consensus        53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~g  132 (387)
T 1kob_A           53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG  132 (387)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred             eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCC
Confidence            567889999999999999887  778999988643  34456889999999999999999999994 5779999999999


Q ss_pred             CChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++.... .+++..+..++.|++.||
T Consensus       133 g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL  162 (387)
T 1kob_A          133 GELFDRIAAEDYKMSEAEVINYMRQACEGL  162 (387)
T ss_dssp             CBHHHHTTCTTCCBCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            99999998654 688889999999998875

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.75  E-value=2.6e-18  Score=107.14  Aligned_cols=104  Identities=18%  Similarity=0.306  Sum_probs=87.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++...     ....+.+|..++..+ +|||++++.+.+. .+..++|||
T Consensus        54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E  133 (396)
T 4dc2_A           54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE  133 (396)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEE
Confidence            567889999999999999887  6789999986331     223466788887765 8999999999994 577999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|..++.+.+.+++..++.++.|++.||
T Consensus       134 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL  166 (396)
T 4dc2_A          134 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL  166 (396)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999888899999999999998875

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.74  E-value=3.4e-18  Score=108.97  Aligned_cols=104  Identities=27%  Similarity=0.320  Sum_probs=87.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....    ....+.+|+.++..++|||++++++++. .+..++||||+
T Consensus        39 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~  118 (494)
T 3lij_A           39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECY  118 (494)
T ss_dssp             EEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecC
Confidence            667889999999999999987  7789999886432    2456788999999999999999999994 47799999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|+|.+++.....+++..+..++.|++.||
T Consensus       119 ~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l  149 (494)
T 3lij_A          119 KGGELFDEIIHRMKFNEVDAAVIIKQVLSGV  149 (494)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999999998877888999999999998875

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.74  E-value=2.9e-18  Score=107.45  Aligned_cols=104  Identities=24%  Similarity=0.363  Sum_probs=89.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----------HHHHHHHHHHHHhcCCCCceeeeeeeEecCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----------ERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l   69 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+....          ....+.+|+.++..++|||++++.+.+..+..++
T Consensus       137 y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~l  216 (419)
T 3i6u_A          137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYI  216 (419)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSEEEE
T ss_pred             EEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCceEE
Confidence            567789999999999999887  6889999885321          1124678999999999999999999998788999


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++|+|.+++...+.+++..+..++.|++.||
T Consensus       217 v~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l  252 (419)
T 3i6u_A          217 VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV  252 (419)
T ss_dssp             EEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            999999999999998888889999999999998775

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.74  E-value=8.7e-18  Score=105.26  Aligned_cols=104  Identities=26%  Similarity=0.242  Sum_probs=88.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHH-----HHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE-----RKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |...+.||+|+||.||.+.++  +..+++|.++....     ...+.+|..++..++|+|++++.+.+. .+..++||||
T Consensus        63 f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~  142 (412)
T 2vd5_A           63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEY  142 (412)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcC
Confidence            567789999999999999886  78999999864321     223678888999999999999999984 5779999999


Q ss_pred             cCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.+++.+. ..+++..++.++.|++.||
T Consensus       143 ~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL  175 (412)
T 2vd5_A          143 YVGGDLLTLLSKFGERIPAEMARFYLAEIVMAI  175 (412)
T ss_dssp             CCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999874 3688999999999998775

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.74  E-value=6.8e-18  Score=107.24  Aligned_cols=104  Identities=29%  Similarity=0.373  Sum_probs=91.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...     .....+.+|+.++..++|||++++++.+. .+..+++||+
T Consensus        28 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  107 (484)
T 3nyv_A           28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEV  107 (484)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEec
Confidence            667889999999999999887  789999988532     23567889999999999999999999995 4779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+|+|.+++.....+++..+..++.|++.||
T Consensus       108 ~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l  139 (484)
T 3nyv_A          108 YTGGELFDEIISRKRFSEVDAARIIRQVLSGI  139 (484)
T ss_dssp             CCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998888899999999999998875

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.74  E-value=1.3e-17  Score=101.47  Aligned_cols=100  Identities=29%  Similarity=0.366  Sum_probs=87.1

Q ss_pred             ceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCC-CCceeeeeeeEe-cCceEEEEeecCCCChH
Q psy9377           5 SKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGACT-GNPVCLVMEYAEGGSLY   80 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~~lv~e~~~~g~l~   80 (106)
                      .+.||+|+||.||++.+.  +..+++|.+... ......+|+..+..+. |||++++.+.+. ....+++|||+++|+|.
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   94 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF   94 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh-hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence            478999999999999987  788999998643 3456678888898886 999999999994 57799999999999999


Q ss_pred             HHHhcCCCCchhhhhhhhhccccCC
Q psy9377          81 NELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        81 ~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++.....+++..+..++.|++.||
T Consensus        95 ~~l~~~~~~~~~~~~~i~~qi~~~l  119 (325)
T 3kn6_A           95 ERIKKKKHFSETEASYIMRKLVSAV  119 (325)
T ss_dssp             HHHHHCSCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999888899999999999998775

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.74  E-value=1.3e-17  Score=102.49  Aligned_cols=104  Identities=25%  Similarity=0.294  Sum_probs=90.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+..   ......+.+|+.++..++|||++++.+.+ ..+..+++|||++
T Consensus        35 y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  114 (360)
T 3eqc_A           35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD  114 (360)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             ceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCC
Confidence            567789999999999999987  78899998863   33456788999999999999999999988 5578999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++.....+++..+..++.|++.|+
T Consensus       115 ~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l  144 (360)
T 3eqc_A          115 GGSLDQVLKKAGRIPEQILGKVSIAVIKGL  144 (360)
T ss_dssp             TCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            999999999877788888889999888764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.74  E-value=7.1e-18  Score=103.21  Aligned_cols=103  Identities=25%  Similarity=0.378  Sum_probs=88.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....     ....+.+|+.+++.++|||++++++.+. .+..+++|||
T Consensus        11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~   90 (336)
T 3h4j_B           11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY   90 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEEC
Confidence            677899999999999999986  7899999986332     1246788999999999999999999994 5779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      + +|++.+++...+.+++..+..++.|++.|+
T Consensus        91 ~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL  121 (336)
T 3h4j_B           91 A-GGELFDYIVEKKRMTEDEGRRFFQQIICAI  121 (336)
T ss_dssp             C-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             C-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9 679999998878899999999999998875

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.74  E-value=7.8e-18  Score=102.11  Aligned_cols=104  Identities=23%  Similarity=0.315  Sum_probs=90.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH--------HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA--------ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....        ....+.+|+.++..++|||++++.+.+. .+..+++
T Consensus        14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (321)
T 2a2a_A           14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLI   93 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence            667889999999999999887  7889999885321        2466889999999999999999999984 4779999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||++++++|.+++.....+++..+..++.|++.||
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL  128 (321)
T 2a2a_A           94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGV  128 (321)
T ss_dssp             ECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999877788889999999998775

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.73  E-value=2.5e-17  Score=99.79  Aligned_cols=104  Identities=22%  Similarity=0.342  Sum_probs=83.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cC----------
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GN----------   65 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~----------   65 (106)
                      |++.+.||+|+||.||++.+.  +..+++|.++.   ....+.+.+|+.++..++|||++++++.+. .+          
T Consensus         8 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~   87 (332)
T 3qd2_B            8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDE   87 (332)
T ss_dssp             EEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC
T ss_pred             CceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhh
Confidence            567889999999999999987  78899998852   234567889999999999999999998872 11          


Q ss_pred             -----------------------------------------------ceEEEEeecCCCChHHHHhcCCCCch---hhhh
Q psy9377          66 -----------------------------------------------PVCLVMEYAEGGSLYNELQRSSAASL---KFCK   95 (106)
Q Consensus        66 -----------------------------------------------~~~lv~e~~~~g~l~~~l~~~~~~~~---~~~~   95 (106)
                                                                     ..+++|||+++|+|.+++........   ..+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  167 (332)
T 3qd2_B           88 IWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCL  167 (332)
T ss_dssp             --------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHH
T ss_pred             hhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHH
Confidence                                                           27999999999999999987654332   2367


Q ss_pred             hhhhccccCC
Q psy9377          96 IYLPFWFSSS  105 (106)
Q Consensus        96 ~~~~qll~~~  105 (106)
                      .++.|++.||
T Consensus       168 ~i~~qi~~aL  177 (332)
T 3qd2_B          168 HIFIQIAEAV  177 (332)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            7888888765

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.73  E-value=1.3e-17  Score=100.99  Aligned_cols=104  Identities=28%  Similarity=0.316  Sum_probs=87.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEec---CceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACTG---NPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++...   ....+.+|+.++..++|||++++.+++..   ...+++|||
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~   90 (319)
T 4euu_A           11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF   90 (319)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred             EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence            677899999999999999987  7889999986422   24567789999999999999999998842   478999999


Q ss_pred             cCCCChHHHHhcCCC---CchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSA---ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~---~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++.....   +++..+..++.|++.||
T Consensus        91 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L  125 (319)
T 4euu_A           91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM  125 (319)
T ss_dssp             CTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence            999999999986543   78888899999998775

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.73  E-value=1.1e-17  Score=101.44  Aligned_cols=104  Identities=25%  Similarity=0.364  Sum_probs=88.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----------HHHHHHHHHHHHhcCCCCceeeeeeeEecCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----------ERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l   69 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....          ....+.+|+.++..++|||++++.+.+..+..++
T Consensus        12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~l   91 (322)
T 2ycf_A           12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYI   91 (322)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSEEE
T ss_pred             eeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCceEE
Confidence            567889999999999999887  6889999886321          1234678999999999999999999997777999


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++++|.+++.....+++..+..++.|++.||
T Consensus        92 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l  127 (322)
T 2ycf_A           92 VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV  127 (322)
T ss_dssp             EEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            999999999999998877888888899999998775

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.73  E-value=2.2e-17  Score=100.41  Aligned_cols=104  Identities=30%  Similarity=0.382  Sum_probs=87.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |.+.+.||+|+||.||.+.+.     +..+++|.++.   ......+.+|+.++..++|||++++.+.+. .+..++|||
T Consensus        51 y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  130 (325)
T 3kul_A           51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE  130 (325)
T ss_dssp             EEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEE
T ss_pred             eEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEee
Confidence            456789999999999999875     34599999863   234567889999999999999999999994 477899999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.++++.. ..++...+..++.|++.||
T Consensus       131 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L  164 (325)
T 3kul_A          131 YMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM  164 (325)
T ss_dssp             CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            99999999999764 4688888889999988765

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.73  E-value=2.2e-17  Score=97.87  Aligned_cols=104  Identities=31%  Similarity=0.519  Sum_probs=87.9

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH-HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |...+.||+|+||.||.+.+. +..+++|.+.... ..+.+.+|+.++..++|||++++.+.+ ..+..+++|||+++++
T Consensus        12 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   91 (269)
T 4hcu_A           12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC   91 (269)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCB
T ss_pred             ceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCc
Confidence            566789999999999999986 7789999986432 345688999999999999999999998 4577999999999999


Q ss_pred             hHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++... ..++...+..++.|++.|+
T Consensus        92 L~~~l~~~~~~~~~~~~~~i~~~i~~~l  119 (269)
T 4hcu_A           92 LSDYLRTQRGLFAAETLLGMCLDVCEGM  119 (269)
T ss_dssp             HHHHHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCcccCHHHHHHHHHHHHHHH
Confidence            99999764 4577888888888888765

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.73  E-value=1.5e-17  Score=98.92  Aligned_cols=104  Identities=22%  Similarity=0.343  Sum_probs=89.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~   76 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...  .....+.+|+.++..++|||++++.+.+. .+..+++|||+++
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   90 (277)
T 3f3z_A           11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTG   90 (277)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCC
Confidence            567889999999999999887  567899987532  23567888999999999999999999994 4779999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++.....+++..+..++.|++.|+
T Consensus        91 ~~L~~~~~~~~~~~~~~~~~i~~~i~~~l  119 (277)
T 3f3z_A           91 GELFERVVHKRVFRESDAARIMKDVLSAV  119 (277)
T ss_dssp             CBHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877888999999999998775

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.73  E-value=2.2e-17  Score=98.37  Aligned_cols=104  Identities=24%  Similarity=0.317  Sum_probs=89.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|||++++.+.+. .+..+++||++
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   87 (284)
T 3kk8_A            8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV   87 (284)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecC
Confidence            667899999999999999887  788999988532    23466788999999999999999999985 46789999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|.+++.....+++..+..++.|++.|+
T Consensus        88 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l  118 (284)
T 3kk8_A           88 TGGELFEDIVAREFYSEADASHCIQQILESI  118 (284)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999999998877788999999999998765

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.73  E-value=3.8e-17  Score=99.58  Aligned_cols=104  Identities=30%  Similarity=0.442  Sum_probs=87.0

Q ss_pred             CCCceeEeecCcceEEEEEECC-------ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN-------QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~-------~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++.+.+       ..+++|.++..   .....+.+|+.++..++|||++++.+.+ ..+..+++
T Consensus        49 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  128 (343)
T 1luf_A           49 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLL  128 (343)
T ss_dssp             CEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEE
Confidence            5677899999999999998753       67999998632   3356788999999999999999999998 45779999


Q ss_pred             EeecCCCChHHHHhcC------------------------CCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS------------------------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~------------------------~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++...                        ..++...+..++.|++.||
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l  187 (343)
T 1luf_A          129 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGM  187 (343)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHH
T ss_pred             EecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999864                        3466777788888888765

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.73  E-value=3.1e-17  Score=101.54  Aligned_cols=104  Identities=33%  Similarity=0.461  Sum_probs=87.3

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |++.+.||+|+||.||++.+.     +..+++|.++.   ....+.+.+|+.++..++|||++++.+.+. .+..+++||
T Consensus        47 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  126 (373)
T 2qol_A           47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE  126 (373)
T ss_dssp             CCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             ceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEe
Confidence            678899999999999999764     45799998863   234567889999999999999999999994 577999999


Q ss_pred             ecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++.... .++......++.|++.||
T Consensus       127 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL  160 (373)
T 2qol_A          127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM  160 (373)
T ss_dssp             CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            999999999998754 577788888888888765

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.73  E-value=4.8e-18  Score=104.14  Aligned_cols=102  Identities=25%  Similarity=0.318  Sum_probs=85.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++...  ....+|+.++..+ +|||++++.+.+. .+..+++|||++||
T Consensus        24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg  101 (342)
T 2qr7_A           24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK--RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG  101 (342)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT--CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc--CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCC
Confidence            567889999999999999987  7889999986432  1233566666665 7999999999994 57799999999999


Q ss_pred             ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++...+.+++..+..++.|++.||
T Consensus       102 ~L~~~i~~~~~~~~~~~~~~~~qi~~al  129 (342)
T 2qr7_A          102 ELLDKILRQKFFSEREASAVLFTITKTV  129 (342)
T ss_dssp             BHHHHHHTCTTCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999999888899999999999998875

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.73  E-value=9.9e-18  Score=102.04  Aligned_cols=104  Identities=25%  Similarity=0.366  Sum_probs=84.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCH------HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETE------AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~l   69 (106)
                      |.+.+.||+|+||.||.+...     +..+++|.++..      .....+.+|+.++..++|||++++.+.+. .+..++
T Consensus        19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   98 (327)
T 3a62_A           19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYL   98 (327)
T ss_dssp             EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred             eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEE
Confidence            567889999999999999872     678999988632      12345678999999999999999999984 578999


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++|+|.+++...+.+++..+..++.|++.||
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al  134 (327)
T 3a62_A           99 ILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL  134 (327)
T ss_dssp             EEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999999877788889999999998775

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.73  E-value=1.6e-17  Score=98.39  Aligned_cols=104  Identities=31%  Similarity=0.470  Sum_probs=88.4

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH-HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~   78 (106)
                      |++.+.||+|+||.||.+.+. +..+++|.+.... ....+.+|+.++..++|||++++.+.+. .+..+++||++++++
T Consensus        10 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   89 (268)
T 3sxs_A           10 ITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGC   89 (268)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCB
T ss_pred             eeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCc
Confidence            567889999999999999887 5679999886432 3456888999999999999999999994 577999999999999


Q ss_pred             hHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++.... .+++..+..++.|++.|+
T Consensus        90 L~~~l~~~~~~~~~~~~~~i~~qi~~~l  117 (268)
T 3sxs_A           90 LLNYLRSHGKGLEPSQLLEMCYDVCEGM  117 (268)
T ss_dssp             HHHHHHHHGGGCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            999998753 478888889999988775

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.73  E-value=1.1e-17  Score=102.99  Aligned_cols=104  Identities=22%  Similarity=0.298  Sum_probs=88.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.++...     ....+..|..++..+ .||+++++.+.+. .+..++|||
T Consensus        22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E  101 (353)
T 2i0e_A           22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME  101 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEe
Confidence            567789999999999999987  6789999986432     234567788888877 7999999999984 478999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |++||+|.++++..+.+++..++.++.|++.||
T Consensus       102 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL  134 (353)
T 2i0e_A          102 YVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGL  134 (353)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999877899999999999998875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.72  E-value=1.8e-17  Score=100.08  Aligned_cols=103  Identities=56%  Similarity=0.890  Sum_probs=86.2

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCChHH
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYN   81 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l~~   81 (106)
                      |++.+.||+|+||.||++.+.+..+++|.+........+.+|+..+..++|||++++++.+. +..+++|||+++|+|.+
T Consensus        10 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~lv~e~~~~~~L~~   88 (307)
T 2eva_A           10 IEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-NPVCLVMEYAEGGSLYN   88 (307)
T ss_dssp             EEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT-TTTEEEEECCTTCBHHH
T ss_pred             eeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcEEEEEcCCCCCHHH
Confidence            55678999999999999999899999999976666677889999999999999999998775 45899999999999999


Q ss_pred             HHhcCCC---CchhhhhhhhhccccCC
Q psy9377          82 ELQRSSA---ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        82 ~l~~~~~---~~~~~~~~~~~qll~~~  105 (106)
                      ++.....   ++......++.|++.|+
T Consensus        89 ~l~~~~~~~~~~~~~~~~~~~qi~~~l  115 (307)
T 2eva_A           89 VLHGAEPLPYYTAAHAMSWCLQCSQGV  115 (307)
T ss_dssp             HHHCSSSEECCCHHHHHHHHHHHHHHH
T ss_pred             HHhccCCCCccCHHHHHHHHHHHHHHH
Confidence            9987653   44556667777776654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.72  E-value=1.8e-17  Score=98.72  Aligned_cols=104  Identities=24%  Similarity=0.363  Sum_probs=89.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--------HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--------AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...        .....+.+|+.++..++|||++++.+.+. .+..+++
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   86 (283)
T 3bhy_A            7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLI   86 (283)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEE
Confidence            567889999999999999987  788999987522        12567889999999999999999999984 4779999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||++++++|.+++.....++...+..++.|++.|+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l  121 (283)
T 3bhy_A           87 LELVSGGELFDFLAEKESLTEDEATQFLKQILDGV  121 (283)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             EeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999998877788899999999998765

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.72  E-value=3.5e-17  Score=97.40  Aligned_cols=104  Identities=21%  Similarity=0.260  Sum_probs=88.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+..    ......+.+|+..+..+ +|||++++.+.+ ..+..+++|||
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~   92 (289)
T 1x8b_A           13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEY   92 (289)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEe
Confidence            567789999999999999987  78999998863    23455677888888888 899999999998 45789999999


Q ss_pred             cCCCChHHHHhcC----CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS----SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~----~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++...    ..+++..+..++.|++.||
T Consensus        93 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al  128 (289)
T 1x8b_A           93 CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL  128 (289)
T ss_dssp             CTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHH
Confidence            9999999999864    5578888899999998875

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.72  E-value=2.8e-17  Score=98.58  Aligned_cols=102  Identities=18%  Similarity=0.166  Sum_probs=84.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+...     .....+.+|...+..++|+|++++++.+ ..+..+++|||
T Consensus        33 y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  112 (286)
T 3uqc_A           33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEW  112 (286)
T ss_dssp             EEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEe
Confidence            677899999999999999987  789999998632     2346788899999999999999999998 45789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|++|.++++..  .....+..++.|++.||
T Consensus       113 ~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL  142 (286)
T 3uqc_A          113 IRGGSLQEVADTS--PSPVGAIRAMQSLAAAA  142 (286)
T ss_dssp             CCEEEHHHHHTTC--CCHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHhcC--CChHHHHHHHHHHHHHH
Confidence            9999999999653  23445677888888765

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.72  E-value=2.1e-17  Score=99.51  Aligned_cols=104  Identities=22%  Similarity=0.312  Sum_probs=88.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~   76 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++..  .....+.+|+.++..++|||++++.+.+. .+..+++||++++
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   90 (304)
T 2jam_A           11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSG   90 (304)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             ceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCC
Confidence            567789999999999999886  788999988643  23456788999999999999999999984 5779999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++...+.+++..+..++.|++.|+
T Consensus        91 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l  119 (304)
T 2jam_A           91 GELFDRILERGVYTEKDASLVIQQVLSAV  119 (304)
T ss_dssp             CBHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            99999998877788888899999988765

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.72  E-value=4.1e-17  Score=97.75  Aligned_cols=104  Identities=18%  Similarity=0.239  Sum_probs=89.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+..     ......+.+|+.++..++|+|++++.+.+. .+..+++||+
T Consensus        17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   96 (294)
T 2rku_A           17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL   96 (294)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEec
Confidence            567789999999999999987  67889998753     234566888999999999999999999995 4778999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++.....+++..+..++.|++.|+
T Consensus        97 ~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l  128 (294)
T 2rku_A           97 CRRRSLLELHKRRKALTEPEARYYLRQIVLGC  128 (294)
T ss_dssp             CTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998877888999999999998765

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.72  E-value=2.6e-17  Score=98.29  Aligned_cols=104  Identities=24%  Similarity=0.359  Sum_probs=87.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--C-------ceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N-------QYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~-------~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l   69 (106)
                      |.+.+.||+|+||.||++.+.  +       ..+++|.+...  ...+.+.+|+.++..++|||++++.+.+ ..+..++
T Consensus        10 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   89 (289)
T 4fvq_A           10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENIL   89 (289)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEE
T ss_pred             eeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEE
Confidence            567789999999999999765  3       46899988532  3456788999999999999999999998 4577899


Q ss_pred             EEeecCCCChHHHHhcCCC-CchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSA-ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++|+|.+++..... ++......++.|++.||
T Consensus        90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L  126 (289)
T 4fvq_A           90 VQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAM  126 (289)
T ss_dssp             EEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999987653 77888888999988775

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.72  E-value=2.1e-17  Score=100.38  Aligned_cols=103  Identities=27%  Similarity=0.317  Sum_probs=85.2

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHH-HHHHHHHHHHHHhcCCCCceeeeeeeEec-----CceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGACTG-----NPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~lv~e~~~   75 (106)
                      |++.+.||+|+||.||++.+.+..+++|.++... .......|+..+..++|||++++.+.+..     ...+++|||++
T Consensus        26 y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~  105 (322)
T 3soc_A           26 LQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHE  105 (322)
T ss_dssp             EEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred             chhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCC
Confidence            5678899999999999999889999999986432 23445568888889999999999999832     23799999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.++++... ++...+..++.|++.|+
T Consensus       106 ~g~L~~~l~~~~-~~~~~~~~i~~qi~~al  134 (322)
T 3soc_A          106 KGSLSDFLKANV-VSWNELCHIAETMARGL  134 (322)
T ss_dssp             TCBHHHHHHHCC-BCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHhcC-CCHHHHHHHHHHHHHHH
Confidence            999999998754 77888888888888765

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.72  E-value=3e-17  Score=98.97  Aligned_cols=104  Identities=24%  Similarity=0.297  Sum_probs=89.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|||++++.+.+ ..+..+++|||+
T Consensus         5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (311)
T 4agu_A            5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC   84 (311)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeC
Confidence            677899999999999999987  788999987532    2345677899999999999999999999 457799999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++.+++.....++...+..++.|++.|+
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l  115 (311)
T 4agu_A           85 DHTVLHELDRYQRGVPEHLVKSITWQTLQAV  115 (311)
T ss_dssp             SEEHHHHHHHTSSCCCHHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHhhhcCCCHHHHHHHHHHHHHHH
Confidence            9999999988877788989999999998765

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.72  E-value=6.7e-18  Score=102.02  Aligned_cols=104  Identities=21%  Similarity=0.237  Sum_probs=88.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-C----ceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-N----PVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~----~~~l   69 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++..     .....+.+|+..+..++|||++++++.+.. .    ..++
T Consensus        14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~l   93 (311)
T 3ork_A           14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI   93 (311)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEE
Confidence            677899999999999999976  788999998632     234567889999999999999999998832 2    3599


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++++|.+++...+.+++..+..++.|++.||
T Consensus        94 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l  129 (311)
T 3ork_A           94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL  129 (311)
T ss_dssp             EEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999998877888999999999998775

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.72  E-value=2.6e-17  Score=98.58  Aligned_cols=103  Identities=21%  Similarity=0.338  Sum_probs=85.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |++.+.||+|+||.||.+.+.  +..+++|.+..    ......+.+|+.++..++|||++++.+.+ ..+..+++|||+
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   83 (292)
T 3o0g_A            4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence            677899999999999999987  78899998852    22346678899999999999999999999 557899999999


Q ss_pred             CCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+ ++.+.+.. .+.+++..+..++.|++.|+
T Consensus        84 ~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l  114 (292)
T 3o0g_A           84 DQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGL  114 (292)
T ss_dssp             SE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             CC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            86 55555544 56788999999999998775

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.72  E-value=3.7e-17  Score=99.72  Aligned_cols=104  Identities=18%  Similarity=0.241  Sum_probs=89.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+...     .....+.+|+.++..++|+|++++.+.+. .+..+++|||
T Consensus        43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  122 (335)
T 2owb_A           43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL  122 (335)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEec
Confidence            567789999999999999887  678899987532     34567888999999999999999999995 4779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++|.+++.....+++..+..++.|++.||
T Consensus       123 ~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL  154 (335)
T 2owb_A          123 CRRRSLLELHKRRKALTEPEARYYLRQIVLGC  154 (335)
T ss_dssp             CTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            99999999998877788999999999998765

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.72  E-value=2.7e-17  Score=98.60  Aligned_cols=104  Identities=30%  Similarity=0.374  Sum_probs=87.0

Q ss_pred             CCCceeEeecCcceEEEEEE----C--CceEEEEEecC--HHHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLW----Q--NQYVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~----~--~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv   70 (106)
                      |++.+.||+|+||.||.+.+    .  +..+++|.+..  ....+.+.+|+.++..++|||++++.+.+.   ....+++
T Consensus        12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   91 (295)
T 3ugc_A           12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI   91 (295)
T ss_dssp             EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEE
T ss_pred             hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEE
Confidence            56788999999999999984    2  67899998863  234567889999999999999999999883   3668999


Q ss_pred             EeecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++.... .++...+..++.|++.|+
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l  127 (295)
T 3ugc_A           92 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM  127 (295)
T ss_dssp             EECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHH
Confidence            99999999999998754 477888888899988765

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.72  E-value=3.8e-17  Score=97.01  Aligned_cols=104  Identities=26%  Similarity=0.373  Sum_probs=89.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|++|.||.+.+.  +..+++|.+....     ....+.+|+..+..++|||++++.+.+. .+..+++||+
T Consensus        13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   92 (276)
T 2h6d_A           13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY   92 (276)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEec
Confidence            567889999999999999887  7899999986432     2346788999999999999999999984 5779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++.....+++..+..++.|++.|+
T Consensus        93 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l  124 (276)
T 2h6d_A           93 VSGGELFDYICKHGRVEEMEARRLFQQILSAV  124 (276)
T ss_dssp             CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            99999999998877788888899999988765

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.72  E-value=3.8e-17  Score=98.69  Aligned_cols=104  Identities=19%  Similarity=0.215  Sum_probs=90.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...     .....+.+|+..+..++|||++++.+.+ ..+..++++|+
T Consensus        36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  115 (309)
T 2h34_A           36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRL  115 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEe
Confidence            667899999999999999886  788999998632     2346688899999999999999999998 45789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++.....++...+..++.|++.|+
T Consensus       116 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l  147 (309)
T 2h34_A          116 INGVDLAAMLRRQGPLAPPRAVAIVRQIGSAL  147 (309)
T ss_dssp             CCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999877788888899999988765

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.72  E-value=5.5e-18  Score=106.85  Aligned_cols=104  Identities=31%  Similarity=0.402  Sum_probs=82.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...     .....+.+|+.++..++|||++++.+.+ ..+..++||||
T Consensus       150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~  229 (446)
T 4ejn_A          150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY  229 (446)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECC
T ss_pred             cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEee
Confidence            566789999999999999887  789999998632     1234566788888999999999999998 45789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++.....+++..+..++.|++.||
T Consensus       230 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL  261 (446)
T 4ejn_A          230 ANGGELFFHLSRERVFSEDRARFYGAEIVSAL  261 (446)
T ss_dssp             CSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998877889999999999998775

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.72  E-value=1.1e-17  Score=103.49  Aligned_cols=104  Identities=33%  Similarity=0.479  Sum_probs=87.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.++..   .....+.+|+.++..++|||++++++.+. .+..++||||++
T Consensus       116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~  195 (377)
T 3cbl_A          116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ  195 (377)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCC
Confidence            445788999999999999986  788999988632   23456788999999999999999999994 477999999999


Q ss_pred             CCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.++++..+ .++......++.|++.|+
T Consensus       196 ~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l  226 (377)
T 3cbl_A          196 GGDFLTFLRTEGARLRVKTLLQMVGDAAAGM  226 (377)
T ss_dssp             TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            999999998643 577888888888888765

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.72  E-value=2.7e-17  Score=97.63  Aligned_cols=104  Identities=23%  Similarity=0.377  Sum_probs=89.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |++.+.||+|++|.||.+.+.  +..+++|.++..   .....+.+|+.++..++|||++++.+.+ ..+..++++|+++
T Consensus         9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (276)
T 2yex_A            9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS   88 (276)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             eEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecC
Confidence            567889999999999999887  788999988532   2356788899999999999999999988 4577899999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++.....+++..+..++.|++.||
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l  118 (276)
T 2yex_A           89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGV  118 (276)
T ss_dssp             TEEGGGGSBTTTBCCHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence            999999998777788888899999988765

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.71  E-value=1.8e-17  Score=98.79  Aligned_cols=104  Identities=30%  Similarity=0.456  Sum_probs=85.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH-HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~   78 (106)
                      |...+.||+|+||.||.+.+. +..+++|.+.... ....+.+|+.++..++|+|++++.+.+. .+..+++|||+++++
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  105 (283)
T 3gen_A           26 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC  105 (283)
T ss_dssp             EEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCB
T ss_pred             HHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCc
Confidence            556789999999999999888 6689999986432 3466889999999999999999999994 577999999999999


Q ss_pred             hHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++.. ...++...+..++.|++.|+
T Consensus       106 L~~~l~~~~~~~~~~~~~~i~~qi~~~l  133 (283)
T 3gen_A          106 LLNYLREMRHRFQTQQLLEMCKDVCEAM  133 (283)
T ss_dssp             HHHHHHCGGGCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence            9999986 45688888889999988765

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.71  E-value=6.6e-17  Score=96.36  Aligned_cols=104  Identities=30%  Similarity=0.448  Sum_probs=87.3

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~   73 (106)
                      |++.+.||+|+||.||++.+.     +..+++|.+..   ......+.+|+..+..++|||++++.+.+..+..+++|||
T Consensus        17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~   96 (281)
T 1mp8_A           17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMEL   96 (281)
T ss_dssp             EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEEEec
Confidence            567789999999999999875     34688888753   2345678899999999999999999999877889999999


Q ss_pred             cCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++.... .++...+..++.|++.||
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l  129 (281)
T 1mp8_A           97 CTLGELRSFLQVRKYSLDLASLILYAYQLSTAL  129 (281)
T ss_dssp             CTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            99999999998654 577888888889988765

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.71  E-value=7.5e-18  Score=100.27  Aligned_cols=104  Identities=27%  Similarity=0.363  Sum_probs=86.4

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe--cCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT--GNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~lv~e~~~~g~l   79 (106)
                      |++.+.||+|++|.||.+.+.+..+++|.++.....+.+.+|+.++..++|||++++.+.+.  .+..+++||++++++|
T Consensus        23 y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L  102 (278)
T 1byg_A           23 LKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL  102 (278)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred             ceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence            56778999999999999998899999999976555677889999999999999999999873  3578999999999999


Q ss_pred             HHHHhcCCC--CchhhhhhhhhccccCC
Q psy9377          80 YNELQRSSA--ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~~--~~~~~~~~~~~qll~~~  105 (106)
                      .+++.....  ++...+..++.|++.|+
T Consensus       103 ~~~l~~~~~~~~~~~~~~~~~~~i~~~l  130 (278)
T 1byg_A          103 VDYLRSRGRSVLGGDCLLKFSLDVCEAM  130 (278)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcccccCCHHHHHHHHHHHHHHH
Confidence            999986542  66777788888887764

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.71  E-value=3.6e-17  Score=97.77  Aligned_cols=104  Identities=23%  Similarity=0.329  Sum_probs=87.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....   ....+.+|+.++..++|||++++.+.+. ....+++|||++
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  103 (285)
T 3is5_A           24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCE  103 (285)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCC
Confidence            567789999999999999886  7789999886332   3467888999999999999999999995 477999999999


Q ss_pred             CCChHHHHhcC----CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS----SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~----~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.+++...    ..+++..+..++.|++.||
T Consensus       104 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L  137 (285)
T 3is5_A          104 GGELLERIVSAQARGKALSEGYVAELMKQMMNAL  137 (285)
T ss_dssp             CCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHH
Confidence            99999998542    5688888889999988775

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.71  E-value=2.6e-17  Score=100.22  Aligned_cols=103  Identities=26%  Similarity=0.399  Sum_probs=86.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++..    .....+.+|+.++..++|||++++.+.+ ..+..+++|||+
T Consensus        36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  115 (329)
T 3gbz_A           36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYA  115 (329)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecC
Confidence            667899999999999999876  788999988632    2234567899999999999999999999 557899999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+ +|.+++.....+++..+..++.|++.||
T Consensus       116 ~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l  145 (329)
T 3gbz_A          116 EN-DLKKYMDKNPDVSMRVIKSFLYQLINGV  145 (329)
T ss_dssp             SE-EHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred             CC-CHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            75 9999999888889999999999998875

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.71  E-value=2.2e-17  Score=99.72  Aligned_cols=104  Identities=23%  Similarity=0.223  Sum_probs=87.7

Q ss_pred             CCCc-eeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhc-CCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGS-KIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSR-VSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~-~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |.+. +.||+|+||.||.+.+.  +..+++|.+...  .....+.+|+.++.. .+|||++++.+.+ ..+..+++|||+
T Consensus        14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   93 (316)
T 2ac3_A           14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM   93 (316)
T ss_dssp             CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcC
Confidence            4443 67999999999999876  788999998532  235667889988887 4799999999998 557899999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|+|.+++.....+++..+..++.|++.||
T Consensus        94 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l  124 (316)
T 2ac3_A           94 RGGSILSHIHKRRHFNELEASVVVQDVASAL  124 (316)
T ss_dssp             TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            9999999998877788999999999998775

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.71  E-value=5.8e-17  Score=96.94  Aligned_cols=104  Identities=28%  Similarity=0.403  Sum_probs=87.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-----cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACT-----GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+..    ......+.+|+.++..++|||++++.+.+.     ....+++
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            455678999999999999887  67788888753    234567888999999999999999999873     2458999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++++|.+++.....++...+..++.|++.|+
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l  142 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGL  142 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence            99999999999999877788888889999988765

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.71  E-value=9.7e-18  Score=103.86  Aligned_cols=104  Identities=28%  Similarity=0.399  Sum_probs=81.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHH-HhcCCCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQ-LSRVSHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~-~~~~~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.++...     ....+..|..+ +..++|||++++++.+. .+..++|||
T Consensus        40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E  119 (373)
T 2r5t_A           40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD  119 (373)
T ss_dssp             EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEe
Confidence            567889999999999999987  6789999986332     22344555554 45679999999999984 578999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |++||+|.+++++.+.+++..++.++.|++.||
T Consensus       120 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL  152 (373)
T 2r5t_A          120 YINGGELFYHLQRERCFLEPRARFYAAEIASAL  152 (373)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999877888999999999998775

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.71  E-value=1.8e-17  Score=104.74  Aligned_cols=104  Identities=26%  Similarity=0.394  Sum_probs=88.0

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      |...+.||+|+||.||++.+. +..+++|.++.. ...+.+.+|+.++..++|||++++.+.+..+..++||||+.+|+|
T Consensus       190 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~~g~L  269 (454)
T 1qcf_A          190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSL  269 (454)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCTTCBH
T ss_pred             eEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecCCCcH
Confidence            445688999999999999987 778999998643 235678899999999999999999999987889999999999999


Q ss_pred             HHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .++++...  .++......++.|++.|+
T Consensus       270 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l  297 (454)
T 1qcf_A          270 LDFLKSDEGSKQPLPKLIDFSAQIAEGM  297 (454)
T ss_dssp             HHHHHSHHHHTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            99998542  466777778888888765

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.71  E-value=3.1e-17  Score=106.24  Aligned_cols=104  Identities=20%  Similarity=0.260  Sum_probs=88.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+....     ....+.+|+.++..++|||++++.+.+. .+..++||||
T Consensus       186 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy  265 (576)
T 2acx_A          186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL  265 (576)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEc
Confidence            566789999999999999886  7899999986432     2345778999999999999999999884 5789999999


Q ss_pred             cCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.+++...+  .+++..+..++.|++.||
T Consensus       266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL  299 (576)
T 2acx_A          266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL  299 (576)
T ss_dssp             CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999998754  388889999999998775

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.71  E-value=2.7e-17  Score=97.83  Aligned_cols=104  Identities=28%  Similarity=0.459  Sum_probs=88.3

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      |++.+.||+|+||.||.+.+. +..+++|.+... .....+.+|+.++..++|||++++.+.+..+..+++||++++++|
T Consensus        15 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L   94 (279)
T 1qpc_A           15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSL   94 (279)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBH
T ss_pred             hhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCCCCH
Confidence            566789999999999999887 568999988643 235678889999999999999999999887889999999999999


Q ss_pred             HHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .+++....  .++...+..++.|++.||
T Consensus        95 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l  122 (279)
T 1qpc_A           95 VDFLKTPSGIKLTINKLLDMAAQIAEGM  122 (279)
T ss_dssp             HHHTTSHHHHTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence            99997643  577888888899988765

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.71  E-value=4.1e-17  Score=97.14  Aligned_cols=104  Identities=28%  Similarity=0.402  Sum_probs=88.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|++|.||.+.+.  +..+++|.+....     ....+.+|+.++..++|||++++.+.+. .+..+++|||
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (279)
T 3fdn_A           11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY   90 (279)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEec
Confidence            567889999999999999887  6689999885322     1345788999999999999999999995 4779999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++.....++...+..++.|++.|+
T Consensus        91 ~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l  122 (279)
T 3fdn_A           91 APLGTVYRELQKLSKFDEQRTATYITELANAL  122 (279)
T ss_dssp             CTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998877788888899999988765

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.71  E-value=3.2e-17  Score=102.02  Aligned_cols=104  Identities=28%  Similarity=0.316  Sum_probs=88.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEec---CceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACTG---NPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++...   ....+.+|+.++..++|||++++++++..   ...+++|||
T Consensus        11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~   90 (396)
T 4eut_A           11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF   90 (396)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred             eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence            677899999999999999987  7899999986432   24567789999999999999999998842   368999999


Q ss_pred             cCCCChHHHHhcCCC---CchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSA---ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~---~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++.....   +++..+..++.|++.||
T Consensus        91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL  125 (396)
T 4eut_A           91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM  125 (396)
T ss_dssp             CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHH
Confidence            999999999986443   78888899999998775

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.71  E-value=6.4e-17  Score=96.20  Aligned_cols=104  Identities=23%  Similarity=0.346  Sum_probs=88.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHH-----HHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE-----RKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+.....     ...+.+|+.++..++|||++++.+.+. .+..+++||+
T Consensus        13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   92 (278)
T 3cok_A           13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM   92 (278)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEec
Confidence            567889999999999999885  78899999864321     356788999999999999999999984 4778999999


Q ss_pred             cCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++... ..+++..+..++.|++.|+
T Consensus        93 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l  125 (278)
T 3cok_A           93 CHNGEMNRYLKNRVKPFSENEARHFMHQIITGM  125 (278)
T ss_dssp             CTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            9999999999875 5678888899999998775

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.70  E-value=6.8e-17  Score=96.83  Aligned_cols=104  Identities=27%  Similarity=0.333  Sum_probs=88.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----------HHHHHHHHHHHHHhcCC-CCceeeeeeeEe-cCc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----------AERKAFAVEVRQLSRVS-HPNIVKLYGACT-GNP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----------~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~   66 (106)
                      |.+.+.||+|++|.||.+.+.  +..+++|.++..           .....+.+|+.++..+. |||++++.+.+. .+.
T Consensus        19 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~   98 (298)
T 1phk_A           19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF   98 (298)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             cceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCe
Confidence            567789999999999999986  688999988521           12456778999999885 999999999985 477


Q ss_pred             eEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++||++++++|.+++.....++...+..++.|++.|+
T Consensus        99 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l  137 (298)
T 1phk_A           99 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI  137 (298)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            999999999999999999877788889999999998765

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.70  E-value=3.6e-17  Score=103.38  Aligned_cols=104  Identities=29%  Similarity=0.468  Sum_probs=87.9

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      |...+.||+|+||.||++.+. +..+++|.++.. ...+.+.+|+.++..++|||++++++.+..+..+++|||+++|+|
T Consensus       186 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~gsL  265 (452)
T 1fmk_A          186 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSL  265 (452)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTCBH
T ss_pred             ceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcCCCH
Confidence            345678999999999999988 567999998643 234678899999999999999999999977889999999999999


Q ss_pred             HHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++...  ..++...+..++.|++.|+
T Consensus       266 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l  293 (452)
T 1fmk_A          266 LDFLKGETGKYLRLPQLVDMAAQIASGM  293 (452)
T ss_dssp             HHHHSHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            9999753  4577888888899988765

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.70  E-value=5.6e-17  Score=98.10  Aligned_cols=103  Identities=29%  Similarity=0.382  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |.+.+.||+|+||.||++.+. +..+++|.+....    ....+.+|+.++..++|||++++.+.+ ..+..+++|||++
T Consensus        23 y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  102 (311)
T 3niz_A           23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME  102 (311)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS
T ss_pred             hHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC
Confidence            667899999999999999987 7889999886321    245678899999999999999999999 4578999999997


Q ss_pred             CCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      + ++.+++... ..+++..+..++.|++.||
T Consensus       103 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l  132 (311)
T 3niz_A          103 K-DLKKVLDENKTGLQDSQIKIYLYQLLRGV  132 (311)
T ss_dssp             E-EHHHHHHTCTTCCCHHHHHHHHHHHHHHH
T ss_pred             C-CHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            5 788888764 4588888899999998775

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.70  E-value=1.1e-16  Score=104.84  Aligned_cols=100  Identities=32%  Similarity=0.410  Sum_probs=86.9

Q ss_pred             eeEeecCcceEEEEEEC----CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ----NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~----~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g   77 (106)
                      +.||+|+||.||++.+.    +..+++|.++..    .....+.+|+.++..++|||++++++++..+..++||||+++|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG  454 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence            47999999999999653    467999988632    2356788999999999999999999999878899999999999


Q ss_pred             ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.++++....+++..+..++.|++.||
T Consensus       455 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L  482 (635)
T 4fl3_A          455 PLNKYLQQNRHVKDKNIIELVHQVSMGM  482 (635)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHhhCCCCCHHHHHHHHHHHHHHH
Confidence            9999999887888888899999998775

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.70  E-value=5.9e-17  Score=98.28  Aligned_cols=104  Identities=28%  Similarity=0.379  Sum_probs=86.0

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHHH---HHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |+..+.||+|+||.||.+... +..+++|.+.....   ...+.+|+.++..++|||++++.+.+ ..+..+++|||+.+
T Consensus        32 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  111 (326)
T 3uim_A           32 FSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN  111 (326)
T ss_dssp             SCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTT
T ss_pred             cccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccC
Confidence            778899999999999999766 78899999864322   22578899999999999999999999 45778999999999


Q ss_pred             CChHHHHhcCC----CCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSS----AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~----~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++....    .++...+..++.|++.||
T Consensus       112 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l  144 (326)
T 3uim_A          112 GSVASCLRERPESQPPLDWPKRQRIALGSARGL  144 (326)
T ss_dssp             CBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHH
Confidence            99999998643    367777888888888765

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.70  E-value=2.8e-17  Score=99.20  Aligned_cols=104  Identities=22%  Similarity=0.417  Sum_probs=85.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+........+.+|+.++..++|||++++.+.+ ..+..+++||++++++
T Consensus        31 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (314)
T 3com_A           31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGS  110 (314)
T ss_dssp             EEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred             hhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCC
Confidence            567789999999999999887  7889999987554456788899999999999999999988 5577999999999999


Q ss_pred             hHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++.. ...++...+..++.|++.|+
T Consensus       111 L~~~~~~~~~~~~~~~~~~i~~~i~~~l  138 (314)
T 3com_A          111 VSDIIRLRNKTLTEDEIATILQSTLKGL  138 (314)
T ss_dssp             HHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9999973 45688888889999988765

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.70  E-value=1.1e-16  Score=96.39  Aligned_cols=104  Identities=33%  Similarity=0.436  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |.+.+.||+|+||.||.+.+.       +..+++|.++.   ....+.+.+|+.++..++|||++++++.+ ..+..+++
T Consensus        25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  104 (314)
T 2ivs_A           25 LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLI  104 (314)
T ss_dssp             EEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEE
Confidence            456789999999999999762       36799998863   23456788899999999999999999998 45779999


Q ss_pred             EeecCCCChHHHHhcCCC------------------------CchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSA------------------------ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~------------------------~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++.....                        ++...+..++.|++.||
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  163 (314)
T 2ivs_A          105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGM  163 (314)
T ss_dssp             EECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHH
T ss_pred             EeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHH
Confidence            999999999999986543                        66777788888888765

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.70  E-value=5.8e-17  Score=96.02  Aligned_cols=103  Identities=29%  Similarity=0.501  Sum_probs=84.4

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHH------HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEA------ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|+||.||++.+.+..+++|.+....      ..+.+.+|+.++..++|||++++.+.+ ..+..+++|||+
T Consensus         9 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (271)
T 3dtc_A            9 LTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFA   88 (271)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECC
T ss_pred             eeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcC
Confidence            5677899999999999999889999999885321      235678899999999999999999999 457789999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|.+++.. +.+++..+..++.|++.|+
T Consensus        89 ~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l  118 (271)
T 3dtc_A           89 RGGPLNRVLSG-KRIPPDILVNWAVQIARGM  118 (271)
T ss_dssp             TTEEHHHHHTS-SCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHhhc-CCCCHHHHHHHHHHHHHHH
Confidence            99999999865 4578888889999988765

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.70  E-value=9e-17  Score=96.21  Aligned_cols=104  Identities=31%  Similarity=0.381  Sum_probs=87.5

Q ss_pred             CCCce-eEeecCcceEEEEEEC----CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEe
Q psy9377           2 LGGSK-IVGQGAFGVVWKGLWQ----NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~-~lg~g~~~~v~~~~~~----~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e   72 (106)
                      |.+.+ .||+|+||.||++.+.    +..+++|.++..    .....+.+|+.++..++|||++++.+.+..+..+++||
T Consensus        18 y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   97 (291)
T 1xbb_A           18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVME   97 (291)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEE
T ss_pred             hhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEEEE
Confidence            34445 8999999999999653    567999988633    23567889999999999999999999997788999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++++|.+++.....++...+..++.|++.||
T Consensus        98 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l  130 (291)
T 1xbb_A           98 MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM  130 (291)
T ss_dssp             CCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHH
Confidence            999999999999877788888899999998775

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.70  E-value=9.5e-17  Score=99.24  Aligned_cols=104  Identities=27%  Similarity=0.369  Sum_probs=84.3

Q ss_pred             CCCceeEeecCcceEEEEEEC---------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~   67 (106)
                      |.+.+.||+|+||.||.+.+.         +..+++|.++..   .....+.+|+.++..+ +|||++++++.+. .+..
T Consensus        83 ~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~  162 (370)
T 2psq_A           83 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL  162 (370)
T ss_dssp             EEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSC
T ss_pred             CEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCE
Confidence            456788999999999999763         246899988632   3456788999999999 8999999999984 5789


Q ss_pred             EEEEeecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      ++||||+++|+|.+++....                .++......++.|++.||
T Consensus       163 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  216 (370)
T 2psq_A          163 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM  216 (370)
T ss_dssp             EEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence            99999999999999998653                255666777888887765

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.69  E-value=9.5e-17  Score=94.85  Aligned_cols=104  Identities=31%  Similarity=0.512  Sum_probs=87.9

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH-HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |+..+.||+|+||.||.+.+. +..+++|.+.... ..+.+.+|+.++..++|||++++.+.+ ..+..+++||++++++
T Consensus        10 y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   89 (267)
T 3t9t_A           10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGC   89 (267)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCB
T ss_pred             eeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCc
Confidence            566789999999999999886 7789999986432 346788999999999999999999998 4578999999999999


Q ss_pred             hHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++... ..++......++.|++.|+
T Consensus        90 L~~~~~~~~~~~~~~~~~~~~~~i~~~l  117 (267)
T 3t9t_A           90 LSDYLRTQRGLFAAETLLGMCLDVCEGM  117 (267)
T ss_dssp             HHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhCcccCCHHHHHHHHHHHHHHH
Confidence            99999865 4577888888888888765

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.69  E-value=7e-17  Score=96.52  Aligned_cols=104  Identities=28%  Similarity=0.363  Sum_probs=89.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |++.+.||+|++|.||.+.+.  +..+++|.+...    .....+.+|+.++..++|||++++.+.+. .+..++++|++
T Consensus        24 y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  103 (287)
T 2wei_A           24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY  103 (287)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEcc
Confidence            667889999999999999886  788999988532    23567888999999999999999999984 47789999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|.+++.....++...+..++.|++.|+
T Consensus       104 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l  134 (287)
T 2wei_A          104 TGGELFDEIIKRKRFSEHDAARIIKQVFSGI  134 (287)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            9999999998777788888999999998775

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.69  E-value=4.5e-17  Score=97.17  Aligned_cols=104  Identities=22%  Similarity=0.367  Sum_probs=88.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|++|.||.+.+.  +..+++|.+....     ....+.+|+.++..++|+|++++.+.+. .+..+++||+
T Consensus        16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   95 (284)
T 2vgo_A           16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF   95 (284)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEe
Confidence            567789999999999999887  6789999885332     1356788999999999999999999984 4778999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++...+.+++..+..++.|++.|+
T Consensus        96 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l  127 (284)
T 2vgo_A           96 APRGELYKELQKHGRFDEQRSATFMEELADAL  127 (284)
T ss_dssp             CTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999998877788888899999998765

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.69  E-value=1.3e-16  Score=102.92  Aligned_cols=104  Identities=22%  Similarity=0.297  Sum_probs=87.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+....     ....+.+|..++..++|||++++.+.+. ....++||||
T Consensus       187 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~  266 (543)
T 3c4z_A          187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTI  266 (543)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEe
Confidence            456688999999999999986  7899999986432     2356778999999999999999999884 5779999999


Q ss_pred             cCCCChHHHHhcC----CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS----SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~----~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.+++...    ..+++..+..++.|++.||
T Consensus       267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL  302 (543)
T 3c4z_A          267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL  302 (543)
T ss_dssp             CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHH
Confidence            9999999999763    3578888899999998775

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.69  E-value=6.2e-17  Score=96.23  Aligned_cols=104  Identities=25%  Similarity=0.386  Sum_probs=87.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv~e   72 (106)
                      |++.+.||+|+||.||++.+.  +..+++|.+..    ....+.+.+|+.++..++|||++++.+.+.   .+..+++||
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   87 (279)
T 2w5a_A            8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME   87 (279)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred             eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence            667889999999999999886  78899998853    234567889999999999999999999872   367899999


Q ss_pred             ecCCCChHHHHhcCC----CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS----AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~----~~~~~~~~~~~~qll~~~  105 (106)
                      |+++++|.+++....    .+++.....++.|++.||
T Consensus        88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l  124 (279)
T 2w5a_A           88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL  124 (279)
T ss_dssp             CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHH
Confidence            999999999997532    377888888999988765

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.69  E-value=5.9e-17  Score=100.30  Aligned_cols=101  Identities=26%  Similarity=0.439  Sum_probs=80.8

Q ss_pred             ceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCCCh
Q psy9377           5 SKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGGSL   79 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l   79 (106)
                      .+.||+|+||.||++.+.  +..+++|.++..  .....+.+|+.++..++|||++++.+.+. .+..++||||+++++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            457999999999999886  788999988643  34567889999999999999999999994 5779999999999999


Q ss_pred             HHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++... ..+++..+..++.|++.||
T Consensus       174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL  200 (373)
T 2x4f_A          174 FDRIIDESYNLTELDTILFMKQICEGI  200 (373)
T ss_dssp             HHHHHHTGGGCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9988754 3577888888899988765

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.69  E-value=1.2e-16  Score=100.45  Aligned_cols=103  Identities=19%  Similarity=0.291  Sum_probs=89.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec------CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG------NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~l   69 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+..    ......+.+|+.++..++|+|++++++.+..      +..++
T Consensus        28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l  107 (432)
T 3n9x_A           28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI  107 (432)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred             EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEE
Confidence            677899999999999999887  78899999863    2345678899999999999999999998832      46899


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||++. |+|.+++.....+++..++.++.|++.||
T Consensus       108 v~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL  142 (432)
T 3n9x_A          108 VLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGE  142 (432)
T ss_dssp             EEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHH
T ss_pred             EEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            999986 59999999888899999999999998875

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.69  E-value=1.4e-16  Score=98.78  Aligned_cols=104  Identities=30%  Similarity=0.350  Sum_probs=86.0

Q ss_pred             CCCceeEeecCcceEEEEEEC---------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~   67 (106)
                      |.+.+.||+|+||.||++.+.         +..+++|.+...   .....+.+|+.++..+ +|||++++.+.+. .+..
T Consensus        71 y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~  150 (382)
T 3tt0_A           71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL  150 (382)
T ss_dssp             EEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             eEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCce
Confidence            456788999999999999863         246999988632   3446788999999998 8999999999994 5779


Q ss_pred             EEEEeecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      +++|||+++|+|.+++....                .+++..+..++.|++.||
T Consensus       151 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL  204 (382)
T 3tt0_A          151 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM  204 (382)
T ss_dssp             EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHH
Confidence            99999999999999998653                377888888999988775

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.69  E-value=1e-16  Score=97.40  Aligned_cols=103  Identities=21%  Similarity=0.315  Sum_probs=86.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...  .....+.+|+.++..++|||++++.+.+ ..+..+++|||+++
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  126 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG  126 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence            344578999999999999886  789999988633  2345678899999999999999999988 55789999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++... .+++..+..++.|++.||
T Consensus       127 ~~L~~~l~~~-~l~~~~~~~i~~qi~~~L  154 (321)
T 2c30_A          127 GALTDIVSQV-RLNEEQIATVCEAVLQAL  154 (321)
T ss_dssp             CBHHHHHTTC-CCCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHhc-CCCHHHHHHHHHHHHHHH
Confidence            9999998754 477888889999988765

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.69  E-value=5.6e-17  Score=99.43  Aligned_cols=86  Identities=34%  Similarity=0.513  Sum_probs=71.3

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEec--CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACTG--NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~--~~~~   68 (106)
                      |.+.+.||+|+||.||++.+.       +..+++|.++..   ...+.+.+|+.++..+ .|||++++++.+..  ...+
T Consensus        24 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~  103 (359)
T 3vhe_A           24 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM  103 (359)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCE
T ss_pred             eeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceE
Confidence            567789999999999999742       468999998642   3345688999999998 78999999999843  4589


Q ss_pred             EEEeecCCCChHHHHhcCC
Q psy9377          69 LVMEYAEGGSLYNELQRSS   87 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~   87 (106)
                      ++|||+++|+|.+++....
T Consensus       104 iv~e~~~~g~L~~~l~~~~  122 (359)
T 3vhe_A          104 VIVEFCKFGNLSTYLRSKR  122 (359)
T ss_dssp             EEEECCTTEEHHHHHHTTT
T ss_pred             EEEEecCCCcHHHHHHhcc
Confidence            9999999999999998654

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.69  E-value=2.7e-16  Score=94.79  Aligned_cols=104  Identities=23%  Similarity=0.378  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+..     ......+.+|+.++..++|+|++++.+.+ ..+..+++||+
T Consensus        34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  113 (310)
T 2wqm_A           34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL  113 (310)
T ss_dssp             EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEec
Confidence            567789999999999999876  78899998863     23456788999999999999999999988 55789999999


Q ss_pred             cCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++|.+++..    ...+++..+..++.|++.|+
T Consensus       114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l  149 (310)
T 2wqm_A          114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL  149 (310)
T ss_dssp             CCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHH
Confidence            999999999874    34577888888888888765

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.69  E-value=4.6e-17  Score=104.76  Aligned_cols=104  Identities=29%  Similarity=0.468  Sum_probs=88.0

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      |.+.+.||+|+||.||++.+. +..+++|.++.. ...+.+.+|+.++..++|+|++++++++..+..++||||+.+|+|
T Consensus       269 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~gsL  348 (535)
T 2h8h_A          269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSL  348 (535)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTEEH
T ss_pred             hhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcCCcH
Confidence            345678999999999999988 567999998643 234678899999999999999999999977889999999999999


Q ss_pred             HHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      .++++..  ..++......++.|++.||
T Consensus       349 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L  376 (535)
T 2h8h_A          349 LDFLKGETGKYLRLPQLVDMAAQIASGM  376 (535)
T ss_dssp             HHHHSHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHHHHH
Confidence            9999753  4577788888899988765

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.69  E-value=4.2e-17  Score=104.11  Aligned_cols=104  Identities=27%  Similarity=0.494  Sum_probs=87.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      |...+.||+|+||.||++.+.  +..+++|.++.. .....+.+|+.++..++|||++++++.+. .+..++||||+++|
T Consensus       222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g  301 (495)
T 1opk_A          222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG  301 (495)
T ss_dssp             EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCC
Confidence            345678999999999999987  788999998643 23567889999999999999999999994 57799999999999


Q ss_pred             ChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.++++..  ..++......++.|++.|+
T Consensus       302 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L  331 (495)
T 1opk_A          302 NLLDYLRECNRQEVSAVVLLYMATQISSAM  331 (495)
T ss_dssp             BHHHHHHHSCTTTSCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHhcCcCCCCHHHHHHHHHHHHHHH
Confidence            999999864  3467777788888888765

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.69  E-value=6.2e-17  Score=96.60  Aligned_cols=104  Identities=27%  Similarity=0.496  Sum_probs=87.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      |+..+.||+|+||.||.+.+.  +..+++|.+... .....+.+|+.++..++|||++++.+.+. .+..+++||+++++
T Consensus        15 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   94 (288)
T 3kfa_A           15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG   94 (288)
T ss_dssp             EEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTE
T ss_pred             eeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCC
Confidence            556788999999999999987  778999988643 34567889999999999999999999994 57799999999999


Q ss_pred             ChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++....  .++...+..++.|++.||
T Consensus        95 ~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l  124 (288)
T 3kfa_A           95 NLLDYLRECNRQEVSAVVLLYMATQISSAM  124 (288)
T ss_dssp             EHHHHHHHCCTTTSCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHhcccCCccHhHHHHHHHHHHHHH
Confidence            9999998643  477788888888888765

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.69  E-value=6.6e-17  Score=99.80  Aligned_cols=104  Identities=25%  Similarity=0.324  Sum_probs=84.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++...       +..+++|.++.   ......+.+|+.++..++|||++++.+.+. ....++|
T Consensus        73 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv  152 (367)
T 3l9p_A           73 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL  152 (367)
T ss_dssp             EEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEE
Confidence            456788999999999999843       45799998853   334556888999999999999999999994 5778999


Q ss_pred             EeecCCCChHHHHhcCC-------CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS-------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~-------~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++....       .++...+..++.|++.||
T Consensus       153 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  194 (367)
T 3l9p_A          153 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC  194 (367)
T ss_dssp             EECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHH
Confidence            99999999999998643       366667778888887765

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.69  E-value=2.2e-17  Score=100.88  Aligned_cols=104  Identities=18%  Similarity=0.237  Sum_probs=88.7

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHHH-------------------HHHHHHHHHHhcCCCCceeeeeeeE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAER-------------------KAFAVEVRQLSRVSHPNIVKLYGAC   62 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~-------------------~~~~~~~~~~~~~~~~~i~~~~~~~   62 (106)
                      |.+.+.||+|+||.||.+.+.+..+++|.+......                   ..+.+|+.++..++|||++++.+.+
T Consensus        33 y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~  112 (348)
T 2pml_X           33 YRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGII  112 (348)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEE
T ss_pred             eEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            667889999999999999888889999998633211                   6788999999999999999999998


Q ss_pred             e-cCceEEEEeecCCCChHHH------Hhc--CCCCchhhhhhhhhccccCC
Q psy9377          63 T-GNPVCLVMEYAEGGSLYNE------LQR--SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        63 ~-~~~~~lv~e~~~~g~l~~~------l~~--~~~~~~~~~~~~~~qll~~~  105 (106)
                      . .+..+++|||+++|+|.++      +..  ...++...+..++.|++.|+
T Consensus       113 ~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l  164 (348)
T 2pml_X          113 TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSF  164 (348)
T ss_dssp             ESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHH
T ss_pred             eeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHH
Confidence            4 4779999999999999998      665  45678888889999998775

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.68  E-value=8.9e-17  Score=99.17  Aligned_cols=104  Identities=24%  Similarity=0.337  Sum_probs=88.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----------HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----------AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----------~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~   67 (106)
                      |.+.+.||+|++|.||++.+.  +..+++|.++..          .....+.+|+.++..+ +|||++++.+.+. .+..
T Consensus        96 y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  175 (365)
T 2y7j_A           96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFM  175 (365)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEE
T ss_pred             cccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEE
Confidence            556789999999999999986  789999987532          1235677899999988 7999999999884 5779


Q ss_pred             EEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|||+++++|.+++.....++...+..++.|++.||
T Consensus       176 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L  213 (365)
T 2y7j_A          176 FLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAV  213 (365)
T ss_dssp             EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999998877788999999999998765

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.68  E-value=5.8e-17  Score=98.24  Aligned_cols=104  Identities=29%  Similarity=0.408  Sum_probs=87.1

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      |...+.||+|+||.||++.+. +..+++|.+...  .....+.+|+.++..++|||++++.+.+ ..+..+++|||+++|
T Consensus        41 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  120 (321)
T 2qkw_B           41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG  120 (321)
T ss_dssp             CSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTC
T ss_pred             cCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCC
Confidence            678889999999999999877 788999987532  3456788999999999999999999998 457899999999999


Q ss_pred             ChHHHHhcCC----CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS----AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~----~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++....    .++......++.|++.|+
T Consensus       121 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l  152 (321)
T 2qkw_B          121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGL  152 (321)
T ss_dssp             BTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHhccCCCccccCHHHHHHHHHHHHHHH
Confidence            9999997543    366777788888887764

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.68  E-value=1.5e-16  Score=96.08  Aligned_cols=104  Identities=21%  Similarity=0.247  Sum_probs=85.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEec--CHHHHHHHHHHHHHHhcCCCCceeeeeeeEe-----cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGACT-----GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~lv~e   72 (106)
                      |++.+.||+|+||.||.+...  +..+++|.+.  .......+.+|+.++..++|||++++.+.+.     ....++++|
T Consensus        31 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e  110 (317)
T 2buj_A           31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP  110 (317)
T ss_dssp             EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEE
T ss_pred             EEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEE
Confidence            667889999999999999875  7889999874  3345567889999999999999999999883     246899999


Q ss_pred             ecCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+.+|+|.+++..    ...+++..+..++.|++.||
T Consensus       111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L  147 (317)
T 2buj_A          111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGL  147 (317)
T ss_dssp             CCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             eCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999975    35678888889999998775

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.68  E-value=5.5e-17  Score=99.02  Aligned_cols=83  Identities=31%  Similarity=0.571  Sum_probs=71.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-------HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-------AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~   71 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...       .....+.+|+.++..++|||++++++.+. .+..++||
T Consensus        28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  107 (345)
T 3hko_A           28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVM  107 (345)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEE
Confidence            567889999999999999886  678999988532       23467888999999999999999999994 57799999


Q ss_pred             eecCCCChHHHHh
Q psy9377          72 EYAEGGSLYNELQ   84 (106)
Q Consensus        72 e~~~~g~l~~~l~   84 (106)
                      ||+++|+|.+++.
T Consensus       108 e~~~gg~L~~~l~  120 (345)
T 3hko_A          108 ELCHGGHLLDKLN  120 (345)
T ss_dssp             ECCCSCBHHHHEE
T ss_pred             eCCCCCcHHHHHH
Confidence            9999999999985

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.68  E-value=9.4e-17  Score=97.72  Aligned_cols=104  Identities=22%  Similarity=0.319  Sum_probs=88.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+..    ......+.+|+.++..++|||++++.+.+ ..+..+++|||+
T Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  106 (331)
T 4aaa_A           27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV  106 (331)
T ss_dssp             EEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             heeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecC
Confidence            567789999999999999987  78899998742    22345677899999999999999999999 457799999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++.+++.....++...+..++.|++.|+
T Consensus       107 ~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l  137 (331)
T 4aaa_A          107 DHTILDDLELFPNGLDYQVVQKYLFQIINGI  137 (331)
T ss_dssp             SEEHHHHHHHSTTCCCHHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence            9999988887777788899999999998765

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.68  E-value=9.1e-17  Score=101.52  Aligned_cols=103  Identities=19%  Similarity=0.258  Sum_probs=80.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec------CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG------NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~l   69 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+..    ......+.+|+.++..++|+|++++++++..      ..+++
T Consensus        55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l  134 (458)
T 3rp9_A           55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV  134 (458)
T ss_dssp             EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred             eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEE
Confidence            667889999999999999877  78899998853    2345678899999999999999999998821      46899


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +||++ +++|.+++.....+++..++.++.|++.||
T Consensus       135 v~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL  169 (458)
T 3rp9_A          135 VLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGV  169 (458)
T ss_dssp             EECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHH
T ss_pred             EEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHH
Confidence            99998 569999999888899999999999998875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.68  E-value=2e-16  Score=94.99  Aligned_cols=104  Identities=31%  Similarity=0.396  Sum_probs=85.5

Q ss_pred             CCCceeEeecCcceEEEEEE----C--CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEec---CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLW----Q--NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACTG---NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~----~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~l   69 (106)
                      |+..+.||+|+||.||.+.+    .  +..+++|.+....   ....+.+|+.++..++|+|++++.+.+..   +..++
T Consensus        23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l  102 (302)
T 4e5w_A           23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL  102 (302)
T ss_dssp             EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred             hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence            56778999999999999984    2  6789999986432   24668889999999999999999999832   56899


Q ss_pred             EEeecCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++|+|.+++.. ...++...+..++.|++.||
T Consensus       103 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l  139 (302)
T 4e5w_A          103 IMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGM  139 (302)
T ss_dssp             EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHH
Confidence            9999999999999955 44678888889999988765

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.68  E-value=1.5e-16  Score=95.53  Aligned_cols=104  Identities=26%  Similarity=0.380  Sum_probs=86.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |++.+.||+|+||.||.+.+.  +..+++|.+...  .....+.+|+.++..++|||++++.+.+ ..+..+++||++++
T Consensus        21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  100 (302)
T 2j7t_A           21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG  100 (302)
T ss_dssp             EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTT
T ss_pred             eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCC
Confidence            667889999999999999987  778999988633  2346778899999999999999999988 45789999999999


Q ss_pred             CChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++.. ...++...+..++.|++.|+
T Consensus       101 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l  130 (302)
T 2j7t_A          101 GAVDAIMLELDRGLTEPQIQVVCRQMLEAL  130 (302)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence            999999876 45688888889999988765

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.68  E-value=6.4e-16  Score=93.00  Aligned_cols=104  Identities=31%  Similarity=0.479  Sum_probs=86.1

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecC------HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIET------EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |...+.||+|+||.||++...+..+++|.+..      ......+.+|+.++..++|||++++.+.+ ..+..+++||++
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  112 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM  112 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             cccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEec
Confidence            34458999999999999988888999998752      22356788999999999999999999998 457899999999


Q ss_pred             CCCChHHHHhcC---CCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRS---SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~---~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|.+++...   ..++......++.|++.||
T Consensus       113 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l  146 (307)
T 2nru_A          113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI  146 (307)
T ss_dssp             TTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHH
Confidence            999999999742   3467777788888887764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.68  E-value=2.9e-16  Score=94.14  Aligned_cols=102  Identities=28%  Similarity=0.442  Sum_probs=82.0

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhc--CCCCceeeeeeeEe-----cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSR--VSHPNIVKLYGACT-----GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~-----~~~~~lv~e~~   74 (106)
                      |++.+.||+|+||.||++.+.+..+++|.+.... ......|..++..  ++|||++++.+.+.     ....+++|||+
T Consensus        10 y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~   88 (301)
T 3q4u_A           10 ITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRD-EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH   88 (301)
T ss_dssp             CEEEEEEEECSSEEEEEEEETTEEEEEEEECGGG-HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred             EEEEEeeccCCCcEEEEEEECCEEEEEEEecccc-chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence            6778999999999999999889999999986432 3344455555554  78999999998862     24589999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|+|.++++.. .++...+..++.|++.|+
T Consensus        89 ~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l  118 (301)
T 3q4u_A           89 EMGSLYDYLQLT-TLDTVSCLRIVLSIASGL  118 (301)
T ss_dssp             TTCBHHHHHTTC-CBCHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHhhc-ccCHHHHHHHHHHHHHHH
Confidence            999999999654 577888888999988765

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.67  E-value=3.4e-16  Score=95.35  Aligned_cols=104  Identities=28%  Similarity=0.377  Sum_probs=84.6

Q ss_pred             CCCceeEeecCcceEEEEEEC---------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~   67 (106)
                      |.+.+.||+|+||.||.+.+.         +..+++|.++..   .....+.+|+.++..+ +|||++++.+.+. .+..
T Consensus        37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  116 (334)
T 2pvf_A           37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL  116 (334)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCC
T ss_pred             eEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCce
Confidence            566789999999999999863         457999988632   3456688899999998 8999999999984 5789


Q ss_pred             EEEEeecCCCChHHHHhcCCC----------------CchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSSA----------------ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~~----------------~~~~~~~~~~~qll~~~  105 (106)
                      +++|||+++|+|.+++.....                ++......++.|++.||
T Consensus       117 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  170 (334)
T 2pvf_A          117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM  170 (334)
T ss_dssp             EEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence            999999999999999986542                56667778888887765

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.67  E-value=1.9e-17  Score=101.10  Aligned_cols=104  Identities=29%  Similarity=0.405  Sum_probs=87.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----------HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----------ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~   68 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++...          ....+.+|+.++..++|||++++.+++. .+..+
T Consensus        26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~  105 (335)
T 3dls_A           26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQ  105 (335)
T ss_dssp             EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEE
Confidence            567889999999999999876  7889999886432          2234567899999999999999999994 57789


Q ss_pred             EEEeecCCC-ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGG-SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g-~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||++.+| +|.+++.....+++..+..++.|++.||
T Consensus       106 lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L  143 (335)
T 3dls_A          106 LVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV  143 (335)
T ss_dssp             EEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999998766 9999999887889999999999998775

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.67  E-value=1.1e-16  Score=95.70  Aligned_cols=103  Identities=26%  Similarity=0.349  Sum_probs=87.0

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      |.+.+.||+|+||.||++.+. +..+++|.+....    ....+.+|+.++..++|||++++++.+. .+..+++||++.
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (288)
T 1ob3_A            4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD   83 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence            677899999999999999887 7889999885321    2356778999999999999999999994 578999999997


Q ss_pred             CCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      + +|.+++... +.+++..+..++.|++.||
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l  113 (288)
T 1ob3_A           84 Q-DLKKLLDVCEGGLESVTAKSFLLQLLNGI  113 (288)
T ss_dssp             E-EHHHHHHTSTTCCCHHHHHHHHHHHHHHH
T ss_pred             C-CHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            6 899998764 5678888899999998775

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.67  E-value=5e-16  Score=94.12  Aligned_cols=103  Identities=29%  Similarity=0.422  Sum_probs=86.1

Q ss_pred             CCCceeEeecCcceEEEEEEC------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEec---CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTG---NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~l   69 (106)
                      |+..+.||+|+||.||.+.+.      +..+++|.++..   .....+.+|+.++..++|||++++.+++..   ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            367789999999999887652      678999998643   345678899999999999999999999843   56899


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++|+|.+++.... ++...+..++.|++.||
T Consensus       113 v~e~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l  147 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGM  147 (318)
T ss_dssp             EECCCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHH
T ss_pred             EEecccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHH
Confidence            999999999999998754 77888888999988765

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.67  E-value=2.7e-16  Score=95.50  Aligned_cols=104  Identities=27%  Similarity=0.341  Sum_probs=87.2

Q ss_pred             CCCceeEeecCcceEEEEEE----C--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLW----Q--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~----~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv   70 (106)
                      |+..+.||+|+||.||.+.+    .  +..+++|.+...  ...+.+.+|+.++..++|+|++++.+.+.   .+..+++
T Consensus        25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv  104 (327)
T 3lxl_A           25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV  104 (327)
T ss_dssp             EEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred             hhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence            56788999999999999985    2  678999988633  34566889999999999999999999873   3568999


Q ss_pred             EeecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++++|.+++... ..++...+..++.|++.||
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al  140 (327)
T 3lxl_A          105 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM  140 (327)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHH
T ss_pred             EeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            9999999999999863 4578888889999988775

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.67  E-value=2.3e-16  Score=95.02  Aligned_cols=104  Identities=36%  Similarity=0.441  Sum_probs=86.2

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~l   69 (106)
                      |...+.||+|+||.||.+.+.       +..+++|.++..   ...+.+.+|+.++..+ +|||++++.+.+ ..+..++
T Consensus        25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l  104 (313)
T 1t46_A           25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV  104 (313)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             hhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEE
Confidence            566789999999999999751       468999988633   3456788999999999 899999999999 4577999


Q ss_pred             EEeecCCCChHHHHhcCC------------------CCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSS------------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~------------------~~~~~~~~~~~~qll~~~  105 (106)
                      +||++++|+|.+++....                  .++......++.|++.||
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l  158 (313)
T 1t46_A          105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM  158 (313)
T ss_dssp             EEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence            999999999999998654                  367778888888888765

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=3.7e-16  Score=95.31  Aligned_cols=104  Identities=28%  Similarity=0.412  Sum_probs=85.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--C----ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N----QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~----~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~   71 (106)
                      |...+.||+|+||.||++.+.  +    ..+++|.++..   .....+.+|+.++..++|||++++.+.+. .+..+++|
T Consensus        46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  125 (333)
T 1mqb_A           46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT  125 (333)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEE
Confidence            345688999999999999765  1    35899988632   33456889999999999999999999994 57899999


Q ss_pred             eecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |++++|+|.+++... ..++...+..++.|++.||
T Consensus       126 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL  160 (333)
T 1mqb_A          126 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM  160 (333)
T ss_dssp             ECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHH
T ss_pred             eCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999864 4678888888999988765

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.67  E-value=3.5e-17  Score=99.55  Aligned_cols=103  Identities=25%  Similarity=0.264  Sum_probs=86.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+........+.+|+.++..+ +|+|++++.+.+ ..+..+++||++ ++
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~   89 (330)
T 2izr_A           11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GP   89 (330)
T ss_dssp             EEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CC
T ss_pred             eEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CC
Confidence            567889999999999999875  7899999886443344577899999998 899999999988 457789999999 89


Q ss_pred             ChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++... +.++...+..++.|++.||
T Consensus        90 ~L~~~~~~~~~~~~~~~~~~i~~qi~~~l  118 (330)
T 2izr_A           90 SLEDLFDLCDRTFSLKTVLMIAIQLISRM  118 (330)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            999999863 5688899999999998775

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.67  E-value=2.5e-16  Score=93.82  Aligned_cols=104  Identities=27%  Similarity=0.434  Sum_probs=86.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.+.     +..+++|.+...   ...+.+.+|+.++..++|||++++.+.+..+..+++||+
T Consensus        14 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~   93 (281)
T 3cc6_A           14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMEL   93 (281)
T ss_dssp             EEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             eEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEEEec
Confidence            566789999999999999764     235899988632   345678889999999999999999999877778999999


Q ss_pred             cCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++.... .++...+..++.|++.|+
T Consensus        94 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l  126 (281)
T 3cc6_A           94 YPYGELGHYLERNKNSLKVLTLVLYSLQICKAM  126 (281)
T ss_dssp             CTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHhccccCCHHHHHHHHHHHHHHH
Confidence            99999999997643 577888888888888765

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.67  E-value=2.7e-16  Score=95.50  Aligned_cols=104  Identities=28%  Similarity=0.441  Sum_probs=84.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--Cce--EEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQY--VAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~--~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |...+.||+|+||.||.+.+.  +..  +++|.+...   .....+.+|+.++..+ +|||++++.+.+ ..+..+++||
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e  106 (327)
T 1fvr_A           27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE  106 (327)
T ss_dssp             CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             ccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEe
Confidence            667789999999999999875  443  488877532   2345678899999999 899999999998 4578999999


Q ss_pred             ecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|+|.+++....                .++...+..++.|++.||
T Consensus       107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  155 (327)
T 1fvr_A          107 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM  155 (327)
T ss_dssp             CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence            999999999998654                577888889999988765

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=5.4e-16  Score=92.65  Aligned_cols=100  Identities=27%  Similarity=0.413  Sum_probs=85.4

Q ss_pred             eeEeecCcceEEEEEEC----CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ----NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGS   78 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~----~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~   78 (106)
                      +.||+|+||.||.+.+.    +..+++|.++.   ....+.+.+|+.++..++|||++++.+.+..+..+++||++++++
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   95 (287)
T 1u59_A           16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGP   95 (287)
T ss_dssp             EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEE
T ss_pred             ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCCCC
Confidence            38999999999999763    56799998864   234567889999999999999999999997788999999999999


Q ss_pred             hHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++... ..++...+..++.|++.||
T Consensus        96 L~~~l~~~~~~~~~~~~~~~~~qi~~~l  123 (287)
T 1u59_A           96 LHKFLVGKREEIPVSNVAELLHQVSMGM  123 (287)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCccCCHHHHHHHHHHHHHHH
Confidence            99999754 4588888899999998765

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.67  E-value=1.1e-16  Score=96.98  Aligned_cols=103  Identities=24%  Similarity=0.427  Sum_probs=74.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |+..+.||+|+||.||.+.+.  +..+++|.++..   .....+.+|+.++..++|||++++++.+ ..+..+++|||++
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   86 (317)
T 2pmi_A            7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD   86 (317)
T ss_dssp             ------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC
T ss_pred             eeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC
Confidence            788899999999999999876  788999988532   2235677899999999999999999999 4578999999998


Q ss_pred             CCChHHHHhcC------CCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRS------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~------~~~~~~~~~~~~~qll~~~  105 (106)
                       |+|.+++...      ..++...++.++.|++.||
T Consensus        87 -~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL  121 (317)
T 2pmi_A           87 -NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL  121 (317)
T ss_dssp             -CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             -CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHH
Confidence             4999998753      2467788888889988775

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.67  E-value=3.4e-16  Score=93.75  Aligned_cols=104  Identities=25%  Similarity=0.381  Sum_probs=85.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEe--------------c
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACT--------------G   64 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------~   64 (106)
                      |+..+.||+|+||.||.+.+.  +..+++|.+... .....+.+|+.++..++|||++++.+.+.              .
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~   87 (303)
T 1zy4_A            8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKK   87 (303)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CE
T ss_pred             chhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccC
Confidence            567889999999999999876  788999988633 34567889999999999999999998762              2


Q ss_pred             CceEEEEeecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          65 NPVCLVMEYAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        65 ~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +..+++||++++|+|.+++.... .++......++.|++.|+
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l  129 (303)
T 1zy4_A           88 STLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL  129 (303)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHH
Confidence            45899999999999999998643 456677778888888765

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.67  E-value=3.5e-16  Score=94.05  Aligned_cols=103  Identities=27%  Similarity=0.431  Sum_probs=87.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.++..   .....+.+|+.++..++|||++++.+.+ ..+..+++|||++
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  103 (303)
T 3a7i_A           24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG  103 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence            667889999999999999876  788999988632   2356788899999999999999999988 4578999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++.. +.++...+..++.|++.|+
T Consensus       104 ~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l  132 (303)
T 3a7i_A          104 GGSALDLLEP-GPLDETQIATILREILKGL  132 (303)
T ss_dssp             TEEHHHHHTT-SCCCHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence            9999999876 4577888888999988765

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=2.1e-16  Score=96.47  Aligned_cols=104  Identities=32%  Similarity=0.464  Sum_probs=83.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~l   69 (106)
                      |.+.+.||+|+||.||.+.+.       +..+++|.++..   .....+.+|+.++..+ +|||++++.+.+ ..+..++
T Consensus        47 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  126 (344)
T 1rjb_A           47 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL  126 (344)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             ceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEE
Confidence            456789999999999999862       357999988643   2345688899999999 899999999998 4578999


Q ss_pred             EEeecCCCChHHHHhcCCC-----------------------CchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSA-----------------------ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~-----------------------~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++|+|.+++.....                       ++...+..++.|++.||
T Consensus       127 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL  185 (344)
T 1rjb_A          127 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGM  185 (344)
T ss_dssp             EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHH
Confidence            9999999999999986532                       56667778888888765

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.67  E-value=6.7e-16  Score=92.58  Aligned_cols=104  Identities=24%  Similarity=0.357  Sum_probs=84.4

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE--ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC--TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~lv~   71 (106)
                      |...+.||+|+||.||++.+.     ...+++|.+..   ......+.+|+.++..++|||++++.+++  ..+..+++|
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  106 (298)
T 3f66_A           27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  106 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence            456789999999999999864     23578888753   23456788999999999999999999987  346789999


Q ss_pred             eecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |++++|+|.+++... ..++......++.|++.|+
T Consensus       107 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l  141 (298)
T 3f66_A          107 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM  141 (298)
T ss_dssp             ECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             eCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            999999999999764 4577788888888888765

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.66  E-value=7e-17  Score=96.97  Aligned_cols=103  Identities=21%  Similarity=0.322  Sum_probs=82.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----------------------------HHHHHHHHHHHHhcCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----------------------------ERKAFAVEVRQLSRVS   51 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----------------------------~~~~~~~~~~~~~~~~   51 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....                            ....+.+|+.++..++
T Consensus        15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   94 (298)
T 2zv2_A           15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD   94 (298)
T ss_dssp             EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred             eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence            667889999999999999886  7889999885321                            1235778999999999


Q ss_pred             CCceeeeeeeEe---cCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          52 HPNIVKLYGACT---GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        52 ~~~i~~~~~~~~---~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||++++.+.+.   .+..+++|||+++++|.+++.. ..+++..+..++.|++.||
T Consensus        95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l  150 (298)
T 2zv2_A           95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGI  150 (298)
T ss_dssp             CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHH
Confidence            999999999984   3568999999999999876543 4588888899999998775

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.66  E-value=3.1e-16  Score=93.86  Aligned_cols=103  Identities=30%  Similarity=0.451  Sum_probs=85.3

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g   77 (106)
                      |++.+.||+|+||.||++.+.+ .+++|.++.    ....+.+.+|+.++..++|+|++++.++...+..+++|||+.++
T Consensus        26 y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~  104 (289)
T 3og7_A           26 ITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGS  104 (289)
T ss_dssp             CEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCEE
T ss_pred             eeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEecCCC
Confidence            6778999999999999997654 488898752    33456788999999999999999999977778899999999999


Q ss_pred             ChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++... ..++...+..++.|++.||
T Consensus       105 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~L  133 (289)
T 3og7_A          105 SLYHHLHASETKFEMKKLIDIARQTARGM  133 (289)
T ss_dssp             EHHHHHTTC---CCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            999999653 4577788888899988765

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.66  E-value=5.9e-16  Score=95.02  Aligned_cols=103  Identities=25%  Similarity=0.361  Sum_probs=86.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-HHHHHHHHHHHHHHhcCC-----CCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-EAERKAFAVEVRQLSRVS-----HPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++. .........|..++..+.     |+|++++.+.+ ..+..+++||
T Consensus        37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e  116 (360)
T 3llt_A           37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFE  116 (360)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEEC
T ss_pred             EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEc
Confidence            667899999999999999986  78899999864 334556677888888775     99999999988 5578999999


Q ss_pred             ecCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      ++ +++|.+++....  .++...+..++.|++.||
T Consensus       117 ~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL  150 (360)
T 3llt_A          117 PL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKAL  150 (360)
T ss_dssp             CC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            99 889999998754  477888899999998875

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.66  E-value=3.5e-16  Score=95.00  Aligned_cols=104  Identities=26%  Similarity=0.329  Sum_probs=82.8

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++.+.       +..+++|.+..   ......+.+|+.++..++|||++++.+.+. .+..+++
T Consensus        32 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (327)
T 2yfx_A           32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL  111 (327)
T ss_dssp             CEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEE
Confidence            677889999999999998732       56799999853   234556888999999999999999999984 5778999


Q ss_pred             EeecCCCChHHHHhcCC-------CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS-------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~-------~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++++|.+++....       .++...+..++.|++.||
T Consensus       112 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al  153 (327)
T 2yfx_A          112 MELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC  153 (327)
T ss_dssp             EECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHH
T ss_pred             EecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHH
Confidence            99999999999998653       356666778888887764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.66  E-value=6.5e-16  Score=100.83  Aligned_cols=99  Identities=27%  Similarity=0.418  Sum_probs=84.7

Q ss_pred             eEeecCcceEEEEEEC----CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           7 IVGQGAFGVVWKGLWQ----NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~----~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      .||+|+||.||++.++    +..+++|.++..   .....+.+|+.++..++|||++++++++..+..++||||+.+|+|
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L  422 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL  422 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence            6999999999999764    456899988632   345678899999999999999999999977889999999999999


Q ss_pred             HHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          80 YNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++... ..++...+..++.|++.||
T Consensus       423 ~~~l~~~~~~l~~~~~~~i~~qi~~~L  449 (613)
T 2ozo_A          423 HKFLVGKREEIPVSNVAELLHQVSMGM  449 (613)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            9999754 4578888889999988765

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.66  E-value=6.9e-17  Score=98.47  Aligned_cols=103  Identities=22%  Similarity=0.302  Sum_probs=80.5

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHH----------HHHHHHHHHHHHhcCC---------CCceeeeeeeE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEA----------ERKAFAVEVRQLSRVS---------HPNIVKLYGAC   62 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~----------~~~~~~~~~~~~~~~~---------~~~i~~~~~~~   62 (106)
                      |.+.+.||+|+||.||++.+.+..+|+|.++...          ....+.+|+.+++.++         |+|++++.+.+
T Consensus        22 y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~  101 (336)
T 2vuw_A           22 LQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH  101 (336)
T ss_dssp             HHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred             chheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence            5678999999999999999889999999886321          1256777888777664         77777665543


Q ss_pred             e-------------------------------cCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          63 T-------------------------------GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        63 ~-------------------------------~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .                               .+..++||||+++|++.+.+.+ +.+++..++.++.|++.||
T Consensus       102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A          102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHH
T ss_pred             EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHH
Confidence            1                               5779999999999977666654 4578899999999999875

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.66  E-value=2.3e-16  Score=96.52  Aligned_cols=103  Identities=19%  Similarity=0.237  Sum_probs=87.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecC----HHHHHHHHHHHHHHhcCCC--CceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIET----EAERKAFAVEVRQLSRVSH--PNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |++.+.||+|+||.||.+.+. +..+++|.+..    ......+.+|+.++..++|  +|++++++.+. .+..+++|| 
T Consensus        11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-   89 (343)
T 3dbq_A           11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-   89 (343)
T ss_dssp             EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred             EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-
Confidence            677899999999999999876 77899998853    2334678889999999876  99999999984 577999999 


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++|.+++.....+++..+..++.|++.||
T Consensus        90 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al  121 (343)
T 3dbq_A           90 CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV  121 (343)
T ss_dssp             CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            55789999999888888889999999998875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.66  E-value=4.1e-16  Score=94.84  Aligned_cols=104  Identities=24%  Similarity=0.434  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--Cc----eEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQ----YVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~----~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e   72 (106)
                      |+..+.||+|+||.||++.+.  +.    .+++|.++..   .....+.+|+.++..++|||++++++.+..+..+++++
T Consensus        17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v~e   96 (327)
T 3poz_A           17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ   96 (327)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEEEE
T ss_pred             cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence            567889999999999999875  33    4577776432   23467889999999999999999999998777899999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ++.+|+|.+++... ..++...+..++.|++.||
T Consensus        97 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l  130 (327)
T 3poz_A           97 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM  130 (327)
T ss_dssp             CCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHH
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999874 4678888889999988765

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.65  E-value=1.2e-15  Score=92.99  Aligned_cols=102  Identities=28%  Similarity=0.434  Sum_probs=84.6

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhc--CCCCceeeeeeeEec-C----ceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSR--VSHPNIVKLYGACTG-N----PVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~-~----~~~lv~e~~   74 (106)
                      |.+.+.||+|+||.||++.+.+..+++|.++.. ....+.+|..++..  ++|||++++.+.+.. +    ..+++|||+
T Consensus        44 y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  122 (342)
T 1b6c_B           44 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH  122 (342)
T ss_dssp             CEEEEEEEEETTEEEEEEEETTEEEEEEEECGG-GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred             EEEEeeecCCCCcEEEEEEEcCccEEEEEeCch-hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence            667889999999999999988999999998643 33456677777776  789999999999843 2    789999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|+|.+++... .++......++.|++.|+
T Consensus       123 ~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l  152 (342)
T 1b6c_B          123 EHGSLFDYLNRY-TVTVEGMIKLALSTASGL  152 (342)
T ss_dssp             TTCBHHHHHHHC-CBCHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHhcc-CccHHHHHHHHHHHHHHH
Confidence            999999999864 477888888888888765

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.65  E-value=6.8e-16  Score=93.42  Aligned_cols=104  Identities=26%  Similarity=0.395  Sum_probs=84.4

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++.+.       +..+++|.+...   .....+.+|+.++..++|+|++++.+.+. .+..+++
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  106 (322)
T 1p4o_A           27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI  106 (322)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEE
Confidence            566789999999999998754       467899988632   23456889999999999999999999984 5779999


Q ss_pred             EeecCCCChHHHHhcC----------CCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS----------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~----------~~~~~~~~~~~~~qll~~~  105 (106)
                      ||++++|+|.+++...          ..++......++.|++.||
T Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  151 (322)
T 1p4o_A          107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM  151 (322)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHH
Confidence            9999999999999753          2346677778888887765

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.65  E-value=1.3e-16  Score=104.98  Aligned_cols=104  Identities=22%  Similarity=0.298  Sum_probs=87.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++...     .......|..++..+ .|++++.+.+.+. .+..++|||
T Consensus       343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E  422 (674)
T 3pfq_A          343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME  422 (674)
T ss_dssp             EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEE
T ss_pred             eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEe
Confidence            566789999999999999887  6789999986432     234566788888876 6899999999884 477999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |++||+|.++++..+.+++..++.++.|++.||
T Consensus       423 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL  455 (674)
T 3pfq_A          423 YVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGL  455 (674)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999878899999999999998875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.65  E-value=9.3e-16  Score=100.76  Aligned_cols=104  Identities=30%  Similarity=0.450  Sum_probs=86.4

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||.+.+.     +..+++|.+..   ......+.+|+.++..++|||++++++.+..+..+++|||
T Consensus       392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~E~  471 (656)
T 2j0j_A          392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMEL  471 (656)
T ss_dssp             EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEEEc
Confidence            455788999999999999875     34688888753   2334678899999999999999999999977889999999


Q ss_pred             cCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.++++... .++......++.|++.||
T Consensus       472 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL  504 (656)
T 2j0j_A          472 CTLGELRSFLQVRKFSLDLASLILYAYQLSTAL  504 (656)
T ss_dssp             CTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            99999999998654 577778888888888765

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.65  E-value=4.4e-16  Score=96.87  Aligned_cols=103  Identities=20%  Similarity=0.243  Sum_probs=86.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecC----HHHHHHHHHHHHHHhcCC--CCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIET----EAERKAFAVEVRQLSRVS--HPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.+. +..+++|.+..    ......+.+|+.++..++  |+|++++++++ ..+..+++|| 
T Consensus        58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-  136 (390)
T 2zmd_A           58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-  136 (390)
T ss_dssp             EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred             eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence            677889999999999999877 78899998853    234567889999999986  59999999988 4577999999 


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++|.+++.....++...+..++.|++.||
T Consensus       137 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL  168 (390)
T 2zmd_A          137 CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV  168 (390)
T ss_dssp             CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            56789999999877788888889999998775

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.65  E-value=1.6e-15  Score=90.73  Aligned_cols=103  Identities=22%  Similarity=0.343  Sum_probs=82.5

Q ss_pred             CCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      .....||+|+||.||.+.+.  +..+++|.+...  .....+.+|+.++..++|||++++.+.+ ..+..+++||+++++
T Consensus        25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  104 (295)
T 2clq_A           25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG  104 (295)
T ss_dssp             SSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             CCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCC
Confidence            34568999999999999986  678999988632  3356688899999999999999999998 457799999999999


Q ss_pred             ChHHHHhcCC---CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS---AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~---~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++....   ..++.....++.|++.|+
T Consensus       105 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l  135 (295)
T 2clq_A          105 SLSALLRSKWGPLKDNEQTIGFYTKQILEGL  135 (295)
T ss_dssp             EHHHHHHHTTCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHhhccCCCccHHHHHHHHHHHHHHH
Confidence            9999998652   344566677888887764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.64  E-value=3.9e-16  Score=94.58  Aligned_cols=104  Identities=20%  Similarity=0.327  Sum_probs=81.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--C---ceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-Cc-----
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N---QYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-NP-----   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~---~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~-----   66 (106)
                      |.+.+.||+|+||.||++.+.  +   ..+++|.++..    .....+.+|+.++..++|||++++.+.+.. ..     
T Consensus        25 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  104 (323)
T 3qup_A           25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLP  104 (323)
T ss_dssp             CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------
T ss_pred             eEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCC
Confidence            677899999999999999865  2   27899988632    335678899999999999999999998833 22     


Q ss_pred             -eEEEEeecCCCChHHHHhcCC------CCchhhhhhhhhccccCC
Q psy9377          67 -VCLVMEYAEGGSLYNELQRSS------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 -~~lv~e~~~~g~l~~~l~~~~------~~~~~~~~~~~~qll~~~  105 (106)
                       .++++||+.+|+|.+++....      .++...+..++.|++.||
T Consensus       105 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al  150 (323)
T 3qup_A          105 IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM  150 (323)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHH
T ss_pred             ccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHH
Confidence             489999999999999996432      477788889999988775

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=1.4e-15  Score=92.36  Aligned_cols=102  Identities=28%  Similarity=0.425  Sum_probs=81.6

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhc--CCCCceeeeeeeEe-c----CceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSR--VSHPNIVKLYGACT-G----NPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~-~----~~~~lv~e~~   74 (106)
                      |.+.+.||+|+||.||++.+.+..+++|.+.... ......|..++..  ++|+|++++.+.+. .    ...+++|||+
T Consensus        39 y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~  117 (337)
T 3mdy_A           39 IQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE-EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH  117 (337)
T ss_dssp             CEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred             eEEEeEeecCCCeEEEEEEECCceEEEEEEeccc-cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence            6778999999999999999999999999986432 2233444444444  48999999999883 3    5689999999


Q ss_pred             CCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|+|.++++.. .++...+..++.|++.||
T Consensus       118 ~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l  147 (337)
T 3mdy_A          118 ENGSLYDYLKST-TLDAKSMLKLAYSSVSGL  147 (337)
T ss_dssp             TTCBHHHHHHHC-CBCHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHhhcc-CCCHHHHHHHHHHHHHHH
Confidence            999999999765 477888888998888765

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.64  E-value=1.3e-15  Score=92.55  Aligned_cols=104  Identities=29%  Similarity=0.363  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEE----C--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLW----Q--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~----~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv   70 (106)
                      |++.+.||+|+||.||.+.+    .  +..+++|.+...  ...+.+.+|+.++..++|+|++++.+.+.   ....+++
T Consensus        43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  122 (326)
T 2w1i_A           43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI  122 (326)
T ss_dssp             EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred             ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence            56678999999999999984    2  678999988632  34567889999999999999999999883   2468999


Q ss_pred             EeecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ||++++++|.+++... ..++...+..++.|++.||
T Consensus       123 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL  158 (326)
T 2w1i_A          123 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM  158 (326)
T ss_dssp             ECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            9999999999999875 3577888888888888765

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.64  E-value=4.8e-16  Score=92.78  Aligned_cols=103  Identities=31%  Similarity=0.422  Sum_probs=84.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH------H---HHHHHHHHHHHhcCCCCceeeeeeeEecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA------E---RKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~------~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv   70 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+....      .   .+.+.+|+.++..++|||++++++.+.... +++
T Consensus        21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~lv   99 (287)
T 4f0f_A           21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-RMV   99 (287)
T ss_dssp             EEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-EEE
T ss_pred             ceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-eEE
Confidence            566789999999999999986  7889999885211      1   156889999999999999999999885433 699


Q ss_pred             EeecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++... ..++......++.|++.|+
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l  135 (287)
T 4f0f_A          100 MEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI  135 (287)
T ss_dssp             EECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHH
Confidence            9999999999888654 3577888888999988765

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.64  E-value=4.3e-16  Score=95.93  Aligned_cols=103  Identities=18%  Similarity=0.208  Sum_probs=82.4

Q ss_pred             CCCceeEeecCcceEEEEE-----EC--CceEEEEEecCHHHHHHHHHHHHHHhcCC---CCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGL-----WQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS---HPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~-----~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++.     ..  +..+++|.++.. ....+..|...+..+.   |+|++.+.+.+ ..+..++|
T Consensus        67 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv  145 (365)
T 3e7e_A           67 VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLV  145 (365)
T ss_dssp             EEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEE
T ss_pred             EEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEE
Confidence            4567789999999999994     22  788999998643 2345666777777665   89999999988 45789999


Q ss_pred             EeecCCCChHHHHhc-----CCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQR-----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~-----~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++..     ...+++..+..++.|++.||
T Consensus       146 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L  185 (365)
T 3e7e_A          146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMI  185 (365)
T ss_dssp             ECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHH
T ss_pred             EeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHH
Confidence            999999999999974     34688888999999998875

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.64  E-value=7.5e-16  Score=94.58  Aligned_cols=103  Identities=23%  Similarity=0.302  Sum_probs=84.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+..+.||+|+||.||++.+.  +..+++|.+...     .....+.+|+.++..++|||++++.+.+ ..+..++||||
T Consensus        56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  135 (348)
T 1u5q_A           56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY  135 (348)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence            556788999999999999875  788999988521     2345688999999999999999999998 55789999999


Q ss_pred             cCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +. |++.+++.. ...+++..+..++.|++.||
T Consensus       136 ~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL  167 (348)
T 1u5q_A          136 CL-GSASDLLEVHKKPLQEVEIAAVTHGALQGL  167 (348)
T ss_dssp             CS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred             CC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            97 578888864 45678888888999988765

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.64  E-value=9.6e-16  Score=93.18  Aligned_cols=104  Identities=36%  Similarity=0.463  Sum_probs=84.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--C-----ceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N-----QYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~-----~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~l   69 (106)
                      |...+.||+|+||.||.+.+.  +     ..+++|.+...   .....+.+|+.++..+ +|||++++.+.+ ..+..++
T Consensus        48 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l  127 (333)
T 2i1m_A           48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV  127 (333)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             ceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEE
Confidence            456789999999999999875  2     36899988643   3456788999999999 899999999999 4578999


Q ss_pred             EEeecCCCChHHHHhcC--------------CCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRS--------------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~--------------~~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++|+|.+++...              ..++......++.|++.||
T Consensus       128 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l  177 (333)
T 2i1m_A          128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGM  177 (333)
T ss_dssp             EEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHH
Confidence            99999999999999753              2356777788888888765

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.64  E-value=1.2e-16  Score=95.77  Aligned_cols=104  Identities=25%  Similarity=0.357  Sum_probs=74.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      |.+.+.||+|++|.||.+.+.  +..+++|.+...   .....+.+|+..+..++|||++++.+.+. .+..+++|||++
T Consensus        17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   96 (303)
T 2vwi_A           17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLS   96 (303)
T ss_dssp             CEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCT
T ss_pred             hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhcc
Confidence            677899999999999999764  788999987532   22456778888899999999999999884 578999999999


Q ss_pred             CCChHHHHhc--------CCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQR--------SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~--------~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.+++..        ...++...+..++.|++.|+
T Consensus        97 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  134 (303)
T 2vwi_A           97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL  134 (303)
T ss_dssp             TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHH
Confidence            9999999974        34577888889999988775

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.64  E-value=7e-16  Score=93.03  Aligned_cols=104  Identities=30%  Similarity=0.405  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEec--CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACTG--NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~--~~~~   68 (106)
                      |.+.+.||+|+||.||++.+.       +..+++|.++..   .....+.+|+.++..+ .|||++++.+.+..  ...+
T Consensus        29 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~  108 (316)
T 2xir_A           29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM  108 (316)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCE
T ss_pred             eeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceE
Confidence            567789999999999999752       468999988642   3345688899999998 68999999999843  4589


Q ss_pred             EEEeecCCCChHHHHhcCCC----------------CchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSA----------------ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~----------------~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+++|+|.+++.....                ++...+..++.|++.|+
T Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al  161 (316)
T 2xir_A          109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM  161 (316)
T ss_dssp             EEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHH
Confidence            99999999999999987543                66777788888888765

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=5.7e-16  Score=95.66  Aligned_cols=102  Identities=23%  Similarity=0.256  Sum_probs=79.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+..    ......+.+|+.++..++|||++++.+.+..       ...+
T Consensus        27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~  106 (367)
T 1cm8_A           27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY  106 (367)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred             EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence            667889999999999999886  78999999853    2335678899999999999999999999832       3469


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||++ +++|.++++. ..+++..+..++.|++.||
T Consensus       107 lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L  141 (367)
T 1cm8_A          107 LVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGL  141 (367)
T ss_dssp             EEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHH
T ss_pred             EEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence            999999 7799999986 4578888899999998775

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.63  E-value=4.7e-16  Score=92.51  Aligned_cols=102  Identities=19%  Similarity=0.330  Sum_probs=84.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe----------------
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT----------------   63 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------------   63 (106)
                      |+..+.||+|+||.||.+.+.  +..+++|.+....  ..+.+|+.++..++|||++++.+.+.                
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~   90 (284)
T 2a19_B           13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS   90 (284)
T ss_dssp             EEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred             cceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence            567889999999999999987  7889999886432  24567889999999999999988772                


Q ss_pred             -cCceEEEEeecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          64 -GNPVCLVMEYAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        64 -~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                       ....+++|||+++|+|.+++...  ..+++..+..++.|++.|+
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l  135 (284)
T 2a19_B           91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV  135 (284)
T ss_dssp             EEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHH
T ss_pred             CcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHH
Confidence             23479999999999999999754  4577888888999988765

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.63  E-value=6.7e-16  Score=92.47  Aligned_cols=103  Identities=23%  Similarity=0.284  Sum_probs=86.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+........+.+|+..+..+ +|++++++.+.+ .....+++||++ ++
T Consensus        12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~   90 (298)
T 1csn_A           12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GP   90 (298)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CC
Confidence            667889999999999999875  7899999886544445577788888888 789999999888 457789999999 89


Q ss_pred             ChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++...+ .++...+..++.|++.|+
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l  119 (298)
T 1csn_A           91 SLEDLLDLCGRKFSVKTVAMAAKQMLARV  119 (298)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence            9999998754 588888999999998775

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=1.2e-16  Score=98.31  Aligned_cols=104  Identities=22%  Similarity=0.322  Sum_probs=85.8

Q ss_pred             CCCceeEeecCcceEEEEEE-----CCceEEEEEecCH------HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLW-----QNQYVAVKHIETE------AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~-----~~~~~~~k~~~~~------~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~   68 (106)
                      |.+.+.||+|+||.||.+.+     .+..+++|.++..      .....+.+|+.++..+ .|+|++++.+.+ ..+..+
T Consensus        56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~  135 (355)
T 1vzo_A           56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH  135 (355)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred             eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEE
Confidence            56678999999999999987     2688999987521      1233455678888887 699999999988 457799


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+++|+|.+++.....+++..+..++.|++.||
T Consensus       136 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL  172 (355)
T 1vzo_A          136 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLAL  172 (355)
T ss_dssp             EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred             EEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999998877788999999999998775

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=6.7e-16  Score=95.61  Aligned_cols=103  Identities=24%  Similarity=0.356  Sum_probs=83.0

Q ss_pred             CCceeEeecCcceEEEEEEC--C---ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe--cCceEEEEe
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ--N---QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT--GNPVCLVME   72 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~--~---~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~lv~e   72 (106)
                      ...+.||+|+||.||++.+.  +   ..+++|.++.   ......+.+|+.++..++|||++++.+.+.  .+..+++||
T Consensus        92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e  171 (373)
T 3c1x_A           92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  171 (373)
T ss_dssp             EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEE
T ss_pred             ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEE
Confidence            44578999999999999764  2   3578888753   234567889999999999999999999873  467899999


Q ss_pred             ecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.++++... .++......++.|++.|+
T Consensus       172 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL  205 (373)
T 3c1x_A          172 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM  205 (373)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence            999999999998653 467777788888888765

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.62  E-value=7.6e-16  Score=93.35  Aligned_cols=104  Identities=24%  Similarity=0.414  Sum_probs=85.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-------cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRV-SHPNIVKLYGACT-------GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-------~~~~~lv   70 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+... .....+.+|+..+..+ +|||++++.+.+.       .+..+++
T Consensus        26 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv  105 (326)
T 2x7f_A           26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV  105 (326)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEE
T ss_pred             EEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEE
Confidence            567889999999999999985  788999988532 2345677888888887 7999999999883       3568999


Q ss_pred             EeecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++...  ..+++..+..++.|++.||
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l  142 (326)
T 2x7f_A          106 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL  142 (326)
T ss_dssp             EECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999864  3577888888999988765

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.62  E-value=2.2e-15  Score=90.31  Aligned_cols=103  Identities=29%  Similarity=0.430  Sum_probs=84.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |+..+.||+|+||.||.+.+.  +..+++|.++...    ....+.+|+.++..++|||++++.+.+ ..+..+++||++
T Consensus         5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (299)
T 2r3i_A            5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL   84 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcc
Confidence            667889999999999999887  7889999885322    125677899999999999999999998 457899999999


Q ss_pred             CCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      . ++|.+++...  ..++...+..++.|++.|+
T Consensus        85 ~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l  116 (299)
T 2r3i_A           85 H-QDLKKFMDASALTGIPLPLIKSYLFQLLQGL  116 (299)
T ss_dssp             S-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred             c-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence            7 5999999865  3577788888888988765

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=2.6e-15  Score=89.89  Aligned_cols=103  Identities=20%  Similarity=0.311  Sum_probs=83.3

Q ss_pred             CCceeEeecCcceEEEEEEC--C---ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-c-CceEEEEe
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ--N---QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT-G-NPVCLVME   72 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~--~---~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-~~~~lv~e   72 (106)
                      ...+.||+|+||.||++.+.  +   ..+++|.+..   ....+.+.+|+.++..++|||++++.+.+. . ...++++|
T Consensus        24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e  103 (298)
T 3pls_A           24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP  103 (298)
T ss_dssp             EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred             ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence            34578999999999999764  2   2688888753   234567889999999999999999999984 3 34589999


Q ss_pred             ecCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++.+|+|.+++.. ...++...+..++.|++.|+
T Consensus       104 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l  137 (298)
T 3pls_A          104 YMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGM  137 (298)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHH
T ss_pred             cccCCCHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence            9999999999987 34577788888889988765

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.62  E-value=2e-16  Score=96.09  Aligned_cols=104  Identities=28%  Similarity=0.467  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--Cc----eEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQ----YVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~----~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e   72 (106)
                      |...+.||+|+||.||++.+.  +.    .+++|.+....   ....+.+|+..+..++|||++++++++..+..++++|
T Consensus        15 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e   94 (325)
T 3kex_A           15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQ   94 (325)
T ss_dssp             EEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEEEE
T ss_pred             ceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEEEE
Confidence            567789999999999999876  33    37777764321   1234567888899999999999999998788999999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+.+|+|.+++... ..++...+..++.|++.||
T Consensus        95 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l  128 (325)
T 3kex_A           95 YLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGM  128 (325)
T ss_dssp             CCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHH
Confidence            99999999999874 4678888889999988775

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.62  E-value=1.2e-15  Score=95.20  Aligned_cols=97  Identities=20%  Similarity=0.242  Sum_probs=79.0

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHH-hcCCCCceeeeeeeEe-----cCceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQL-SRVSHPNIVKLYGACT-----GNPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~-----~~~~~lv~e~~~~g   77 (106)
                      +.||+|+||.||.+.+.  +..+++|.++..   ....+|+.++ ...+|+|++++.+.+.     ....++||||++||
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg  144 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG  144 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSE
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCcc---hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCC
Confidence            67999999999999887  788999998643   2345666665 4468999999999873     35689999999999


Q ss_pred             ChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++....  .+++..+..++.|++.||
T Consensus       145 ~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL  174 (400)
T 1nxk_A          145 ELFSRIQDRGDQAFTEREASEIMKSIGEAI  174 (400)
T ss_dssp             EHHHHHHCC---CCBHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence            9999998753  488899999999998775

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.62  E-value=3.1e-16  Score=95.30  Aligned_cols=103  Identities=26%  Similarity=0.350  Sum_probs=83.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHH---HHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAER---KAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+......   ..+.+|+.++..++|||++++.+.+. .+..+++|||+.
T Consensus         4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (324)
T 3mtl_A            4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD   83 (324)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence            677899999999999999987  788999988643221   13456888999999999999999994 578999999997


Q ss_pred             CCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      + +|.+++.... .++...+..++.|++.||
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL  113 (324)
T 3mtl_A           84 K-DLKQYLDDCGNIINMHNVKLFLFQLLRGL  113 (324)
T ss_dssp             E-EHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            5 8999988754 477888889999998775

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.62  E-value=2e-15  Score=95.77  Aligned_cols=101  Identities=25%  Similarity=0.273  Sum_probs=83.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|||++++.+++..       ..++
T Consensus        64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~  143 (464)
T 3ttj_A           64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY  143 (464)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred             eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence            667889999999999999887  788999998632    345678899999999999999999999832       3479


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +||||+.+ ++.+.+..  .+++..++.++.|++.||
T Consensus       144 lv~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL  177 (464)
T 3ttj_A          144 LVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGI  177 (464)
T ss_dssp             EEEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHH
Confidence            99999976 57777754  377888899999998875

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.62  E-value=2.2e-15  Score=91.44  Aligned_cols=100  Identities=19%  Similarity=0.258  Sum_probs=84.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCC-CCceeeeeeeEe---cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGACT---GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~---~~~~~lv~e~~~   75 (106)
                      |++.+.||+|+||.||.+.+.  +..+++|.++.. ....+.+|+.++..++ |+|++++.+.+.   ....+++||++.
T Consensus        38 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~  116 (330)
T 3nsz_A           38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN  116 (330)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCC
T ss_pred             eEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccC
Confidence            567889999999999999886  789999998633 3456788999999987 999999999984   356899999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|.++++.   +++..+..++.|++.|+
T Consensus       117 ~~~l~~~~~~---~~~~~~~~~~~qi~~~l  143 (330)
T 3nsz_A          117 NTDFKQLYQT---LTDYDIRFYMYEILKAL  143 (330)
T ss_dssp             CCCHHHHGGG---CCHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHh---CCHHHHHHHHHHHHHHH
Confidence            9999999864   67888888999988775

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=2.1e-15  Score=92.38  Aligned_cols=103  Identities=26%  Similarity=0.387  Sum_probs=83.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-------HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-------ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....       ..+.+.+|+.++..++|||++++.+.+ ..+..+++|
T Consensus        12 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   91 (346)
T 1ua2_A           12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVF   91 (346)
T ss_dssp             -CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEE
T ss_pred             cEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEE
Confidence            778899999999999999876  7889999886321       123577899999999999999999999 457899999


Q ss_pred             eecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++ ++.+++.... .+++..+..++.|++.||
T Consensus        92 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l  125 (346)
T 1ua2_A           92 DFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGL  125 (346)
T ss_dssp             ECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHH
T ss_pred             EcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHH
Confidence            99986 8888887643 578888889999988765

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.62  E-value=5e-15  Score=88.99  Aligned_cols=103  Identities=20%  Similarity=0.251  Sum_probs=83.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH------HHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA------ERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv   70 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++...      ....+.+|+.++..++|+|++++.+.+.   .+..+++
T Consensus         7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (305)
T 2wtk_C            7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMV   86 (305)
T ss_dssp             BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEE
T ss_pred             eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEE
Confidence            788999999999999999876  6789999986332      2456889999999999999999999882   3578999


Q ss_pred             EeecCCCChHHHHhc--CCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQR--SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+.++ +.+++..  ...++...+..++.|++.|+
T Consensus        87 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al  122 (305)
T 2wtk_C           87 MEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGL  122 (305)
T ss_dssp             EECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHH
T ss_pred             ehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHH
Confidence            9999876 7777765  34577888888999988765

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.61  E-value=1.4e-15  Score=92.63  Aligned_cols=104  Identities=24%  Similarity=0.432  Sum_probs=86.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--Cc----eEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQ----YVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~----~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e   72 (106)
                      |++.+.||+|+||.||++.+.  +.    ++++|.+..   ......+.+|+.++..++|||++++.+.+..+..+++++
T Consensus        17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v~~   96 (327)
T 3lzb_A           17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ   96 (327)
T ss_dssp             EEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEEEC
T ss_pred             ceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEEEE
Confidence            667899999999999999875  33    357776642   224567888999999999999999999998777999999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ++.+|+|.+++... ..++...+..++.|++.||
T Consensus        97 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL  130 (327)
T 3lzb_A           97 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM  130 (327)
T ss_dssp             CCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999864 4688888889999998775

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.61  E-value=2.1e-15  Score=90.68  Aligned_cols=100  Identities=19%  Similarity=0.225  Sum_probs=81.3

Q ss_pred             CCc-eeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHH-hcCCCCceeeeeeeEe-----cCceEEEEee
Q psy9377           3 GGS-KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQL-SRVSHPNIVKLYGACT-----GNPVCLVMEY   73 (106)
Q Consensus         3 ~~~-~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~-----~~~~~lv~e~   73 (106)
                      .+. +.||+|+||.||.+.+.  +..+++|.+...   ....+|+..+ ...+|||++++.+.+.     ....+++|||
T Consensus        20 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~   96 (299)
T 3m2w_A           20 KVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC   96 (299)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred             hhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEee
Confidence            344 67999999999999886  788999998643   2345667666 5568999999999883     3568999999


Q ss_pred             cCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++....  .+++..+..++.|++.|+
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l  130 (299)
T 3m2w_A           97 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI  130 (299)
T ss_dssp             CCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            99999999998754  588888999999998775

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.61  E-value=4.1e-15  Score=89.89  Aligned_cols=103  Identities=23%  Similarity=0.213  Sum_probs=80.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhc-CCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSR-VSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+..+.||+|+||.||++.+.  +..+++|.+..    .........++..+.. .+|+|++++.+.+ ..+..+++||+
T Consensus        59 y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~  138 (311)
T 3p1a_A           59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTEL  138 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEec
Confidence            456788999999999999987  78899998753    2233344445544444 5899999999999 45789999999


Q ss_pred             cCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      + +++|.+++... ..+++..+..++.|++.||
T Consensus       139 ~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL  170 (311)
T 3p1a_A          139 C-GPSLQQHCEAWGASLPEAQVWGYLRDTLLAL  170 (311)
T ss_dssp             C-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHH
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9 66899888764 3588888899999998775

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.60  E-value=2.5e-15  Score=93.22  Aligned_cols=102  Identities=26%  Similarity=0.352  Sum_probs=77.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCC-CCceeeeeeeEec---CceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVS-HPNIVKLYGACTG---NPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~---~~~~lv~   71 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+..    ........+|+.++..+. |+|++++.+.+..   ...++||
T Consensus        11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~   90 (388)
T 3oz6_A           11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVF   90 (388)
T ss_dssp             EEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEE
T ss_pred             eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEe
Confidence            677899999999999999887  78899998853    234566778999999987 9999999999842   4689999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+. ++|.+++... .++...++.++.|++.||
T Consensus        91 e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L  122 (388)
T 3oz6_A           91 DYME-TDLHAVIRAN-ILEPVHKQYVVYQLIKVI  122 (388)
T ss_dssp             ECCS-EEHHHHHHHT-CCCHHHHHHHHHHHHHHH
T ss_pred             cccC-cCHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence            9997 5899998764 577888888999998775

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.60  E-value=1.5e-15  Score=92.41  Aligned_cols=100  Identities=21%  Similarity=0.301  Sum_probs=83.9

Q ss_pred             eeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCC-CCceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVS-HPNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      +.||+|+||.||++.+.  +..+++|.+...    .....+.+|+.++..+. |||++++.+.+. .+..+++|||+.+|
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~  114 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG  114 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence            78999999999999887  789999988632    23466788999888885 699999999994 57799999999999


Q ss_pred             ChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++...  ..+++..+..++.|++.||
T Consensus       115 ~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L  144 (327)
T 3lm5_A          115 EIFSLCLPELAEMVSENDVIRLIKQILEGV  144 (327)
T ss_dssp             EGGGGGSSCC-CCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence            999998653  5678888899999998775

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.60  E-value=2.7e-15  Score=91.23  Aligned_cols=102  Identities=25%  Similarity=0.278  Sum_probs=78.2

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHH--HhcCCCCceeeeeeeEe------cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQ--LSRVSHPNIVKLYGACT------GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~------~~~~~lv~e~   73 (106)
                      |++.+.||+|+||.||++...+..+++|.++... ......+..+  +..++|+|++++.+.+.      ....+++|||
T Consensus        15 y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~   93 (336)
T 3g2f_A           15 LKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY   93 (336)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred             hheeeecccCCCeEEEEEEECCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence            5678899999999999998889999999986432 2233333333  44579999999987551      1357899999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++.... .+...+..++.|++.||
T Consensus        94 ~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L  124 (336)
T 3g2f_A           94 YPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGL  124 (336)
T ss_dssp             CTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHhhcc-cchhHHHHHHHHHHHHH
Confidence            99999999998755 46677778888888765

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.60  E-value=3.6e-15  Score=89.97  Aligned_cols=104  Identities=26%  Similarity=0.373  Sum_probs=81.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec------Cc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG------NP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~   66 (106)
                      |.+.+.||+|+||.||++...     +..+++|.++.    ......+.+|+.++..++|||++++.+.+..      ..
T Consensus        36 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  115 (313)
T 3brb_A           36 LILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK  115 (313)
T ss_dssp             EEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred             eeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence            566788999999999998764     24799998852    2334668889999999999999999998832      24


Q ss_pred             eEEEEeecCCCChHHHHhc------CCCCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQR------SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~------~~~~~~~~~~~~~~qll~~~  105 (106)
                      .++++|++++|+|.+++..      ...++...+..++.|++.||
T Consensus       116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL  160 (313)
T 3brb_A          116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM  160 (313)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHH
T ss_pred             cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHH
Confidence            6999999999999999942      34577888889999988775

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.60  E-value=1.5e-15  Score=100.04  Aligned_cols=102  Identities=21%  Similarity=0.278  Sum_probs=81.6

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCc-----eEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT-GNP-----VCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~-----~~l   69 (106)
                      |.+.+.||+|+||.||.+.+.   +..+++|.+..   ......+.+|+.++..++|||++++++++. .+.     .++
T Consensus        82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~l  161 (681)
T 2pzi_A           82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYI  161 (681)
T ss_dssp             EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEE
Confidence            567789999999999999875   67899998753   234456788999999999999999999883 233     699


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||||++|++|.+++..  .++...+..++.|++.||
T Consensus       162 v~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL  195 (681)
T 2pzi_A          162 VMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPAL  195 (681)
T ss_dssp             EEECCCCEECC----C--CCCHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHH
Confidence            9999999999988765  578888889999998765

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.60  E-value=6.2e-15  Score=87.96  Aligned_cols=103  Identities=24%  Similarity=0.235  Sum_probs=80.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HH-HHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AE-RKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~-~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |++.+.||+|+||.||++.+.  +..+++|.++..   .. .....++...+..++|||++++.+.+ ..+..+++|||+
T Consensus         9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~   88 (290)
T 3fme_A            9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM   88 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECC
T ss_pred             hhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehh
Confidence            567889999999999999985  788999988632   22 22333444457778999999999998 457899999999


Q ss_pred             CCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++ ++.+++..    ...+++..+..++.|++.|+
T Consensus        89 ~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l  122 (290)
T 3fme_A           89 DT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL  122 (290)
T ss_dssp             SE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             cc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            75 88777753    45688888899999998765

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.60  E-value=3.5e-15  Score=89.98  Aligned_cols=102  Identities=25%  Similarity=0.340  Sum_probs=80.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC--HHHHHHHHHHHHHHhcCCCCceeeeeeeEe--------------
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGACT--------------   63 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------   63 (106)
                      |...+.||+|+||.||++.+.  +..+++|.+..  ......+.+|+.++..++|||++++++.+.              
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~   92 (320)
T 2i6l_A           13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT   92 (320)
T ss_dssp             EEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred             eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence            667889999999999999987  78899998753  334567889999999999999999998762              


Q ss_pred             -cCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          64 -GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        64 -~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                       .+..+++|||+. |+|.+++.. +.+++..+..++.|++.|+
T Consensus        93 ~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l  133 (320)
T 2i6l_A           93 ELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGL  133 (320)
T ss_dssp             SCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHH
T ss_pred             ccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHH
Confidence             256899999997 599999875 4577888889999988765

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.59  E-value=7.1e-15  Score=90.55  Aligned_cols=102  Identities=23%  Similarity=0.291  Sum_probs=85.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEec------CceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTG------NPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~lv   70 (106)
                      |++.+.||+|+||.||.+.+.  +..+++|.+..   ......+.+|+.++..++|||++++.+.+..      ...+++
T Consensus        29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv  108 (364)
T 3qyz_A           29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIV  108 (364)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred             EEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEE
Confidence            667899999999999999887  77899999863   2334678899999999999999999998832      358999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|++.+ +|.+++... .+++..+..++.|++.||
T Consensus       109 ~e~~~~-~L~~~l~~~-~~~~~~~~~i~~qi~~aL  141 (364)
T 3qyz_A          109 QDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGL  141 (364)
T ss_dssp             EECCSE-EHHHHHHHC-CCCHHHHHHHHHHHHHHH
T ss_pred             EcccCc-CHHHHHHhC-CCCHHHHHHHHHHHHHHH
Confidence            999975 999998764 478888899999998775

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.59  E-value=1.4e-15  Score=90.84  Aligned_cols=104  Identities=30%  Similarity=0.450  Sum_probs=80.1

Q ss_pred             CCCceeEeecCcceEEEEEEC---C--ceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---N--QYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~--~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~   71 (106)
                      |++.+.||+|+||.||++.+.   +  ..+++|.++..     .....+.+|+.++..++|||++++++.+..+..++++
T Consensus        20 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~   99 (291)
T 1u46_A           20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT   99 (291)
T ss_dssp             EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEE
T ss_pred             eeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCceeeE
Confidence            567789999999999999753   2  25888877532     2346788899999999999999999999777799999


Q ss_pred             eecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |++++++|.+++... ..++...+..++.|++.|+
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l  134 (291)
T 1u46_A          100 ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM  134 (291)
T ss_dssp             ECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHH
T ss_pred             ecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHH
Confidence            999999999999864 4577888889999988765

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.59  E-value=9e-15  Score=90.36  Aligned_cols=101  Identities=24%  Similarity=0.268  Sum_probs=83.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+..    ......+.+|+.++..++|||++++.+.+..       ...+
T Consensus        27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~  106 (371)
T 2xrw_A           27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY  106 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred             eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence            667889999999999999886  78899998853    2345667889999999999999999999832       2589


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+.+ ++.+.+..  .++...+..++.|++.||
T Consensus       107 lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~al  140 (371)
T 2xrw_A          107 IVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGI  140 (371)
T ss_dssp             EEEECCSE-EHHHHHHS--CCCHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCC-CHHHHHhh--ccCHHHHHHHHHHHHHHH
Confidence            99999975 78888864  477888888999998775

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.58  E-value=2.3e-15  Score=90.07  Aligned_cols=103  Identities=21%  Similarity=0.216  Sum_probs=84.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE--ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC--TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~lv~e~~~~g   77 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+........+.+|+.++..++|++.+.....+  ..+..+++||++ ++
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~   89 (296)
T 3uzp_A           11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GP   89 (296)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CC
Confidence            667889999999999999975  7899999886443444577899999999988766666555  346789999999 88


Q ss_pred             ChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++.. ...+++..+..++.|++.|+
T Consensus        90 ~L~~~~~~~~~~~~~~~~~~i~~qi~~~l  118 (296)
T 3uzp_A           90 SLEDLFNFCSRKFSLKTVLLLADQMISRI  118 (296)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence            99999984 44688888899999998775

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.58  E-value=5.1e-16  Score=93.69  Aligned_cols=104  Identities=21%  Similarity=0.324  Sum_probs=82.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH--------HHHHHHHHHHHHhcC----CCCceeeeeeeE-ecCc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA--------ERKAFAVEVRQLSRV----SHPNIVKLYGAC-TGNP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--------~~~~~~~~~~~~~~~----~~~~i~~~~~~~-~~~~   66 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++...        ....+.+|+..+..+    +|+|++++.+.+ ..+.
T Consensus        33 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~  112 (312)
T 2iwi_A           33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEG  112 (312)
T ss_dssp             CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----
T ss_pred             eEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCe
Confidence            778899999999999999875  7789999985321        122344577777776    899999999988 4577


Q ss_pred             eEEEEee-cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEY-AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~-~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .++++|+ +.+++|.+++...+.+++..+..++.|++.||
T Consensus       113 ~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l  152 (312)
T 2iwi_A          113 FMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI  152 (312)
T ss_dssp             CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            8999999 78899999999877788999999999998775

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.58  E-value=1.5e-15  Score=92.99  Aligned_cols=103  Identities=25%  Similarity=0.344  Sum_probs=83.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe---------cCc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT---------GNP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~   66 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|||++++.+.+.         .+.
T Consensus        19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   98 (351)
T 3mi9_A           19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS   98 (351)
T ss_dssp             EEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CE
T ss_pred             eeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCce
Confidence            667889999999999999986  789999988532    12345778999999999999999999883         245


Q ss_pred             eEEEEeecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      .++||||+.+ ++.+.+... ..++...+..++.|++.||
T Consensus        99 ~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l  137 (351)
T 3mi9_A           99 IYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGL  137 (351)
T ss_dssp             EEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            8999999976 777777654 5688889999999998875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.58  E-value=3.8e-15  Score=89.95  Aligned_cols=103  Identities=19%  Similarity=0.233  Sum_probs=86.2

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecC----HHHHHHHHHHHHHHhcCC--CCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIET----EAERKAFAVEVRQLSRVS--HPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |++.+.||+|+||.||++.+. +..+++|.+..    ......+.+|+.++..++  |+|++++.+.+. .+..+++|| 
T Consensus        30 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-  108 (313)
T 3cek_A           30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-  108 (313)
T ss_dssp             EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-
T ss_pred             EEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-
Confidence            667889999999999999877 78899998852    234567888999999886  599999999884 577899999 


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++|.+++.....++...+..++.|++.||
T Consensus       109 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL  140 (313)
T 3cek_A          109 CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV  140 (313)
T ss_dssp             CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            55789999999887788888889999998775

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.58  E-value=2.5e-15  Score=92.89  Aligned_cols=102  Identities=25%  Similarity=0.270  Sum_probs=77.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+..    ......+.+|+.++..++|||++++.+.+..       ...+
T Consensus        31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~  110 (367)
T 2fst_X           31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY  110 (367)
T ss_dssp             EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred             eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence            677889999999999999876  78899999853    2345667889999999999999999998832       4589


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|++ +++|.+++.. +.+++..+..++.|++.||
T Consensus       111 lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL  145 (367)
T 2fst_X          111 LVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGL  145 (367)
T ss_dssp             EEEECC-CEECC------CCCCHHHHHHHHHHHHHHH
T ss_pred             EEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence            999999 6799988876 4588888999999998775

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.58  E-value=4.5e-15  Score=88.72  Aligned_cols=103  Identities=21%  Similarity=0.216  Sum_probs=82.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE--ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC--TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~lv~e~~~~g   77 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+........+.+|..++..++|++.+.....+  ..+..+++||++ ++
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~   89 (296)
T 4hgt_A           11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GP   89 (296)
T ss_dssp             CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             eEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CC
Confidence            678899999999999999975  7889999876544444577888889999888777666655  457789999999 88


Q ss_pred             ChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++.. ...++...+..++.|++.|+
T Consensus        90 ~L~~~~~~~~~~~~~~~~~~i~~qi~~~l  118 (296)
T 4hgt_A           90 SLEDLFNFCSRKFSLKTVLLLADQMISRI  118 (296)
T ss_dssp             BHHHHHHHTTSCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            99999985 44688889999999998775

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.57  E-value=1.3e-14  Score=88.78  Aligned_cols=102  Identities=21%  Similarity=0.300  Sum_probs=85.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEec------CceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTG------NPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~lv   70 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+..   ......+.+|+.++..++|||++++.+.+..      ...+++
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv   92 (353)
T 2b9h_A           13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII   92 (353)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEE
T ss_pred             eEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEE
Confidence            567889999999999999987  78899998853   2345567889999999999999999988732      568999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|++. ++|.+++... .++...+..++.|++.||
T Consensus        93 ~e~~~-~~L~~~~~~~-~~~~~~~~~~~~qi~~~L  125 (353)
T 2b9h_A           93 QELMQ-TDLHRVISTQ-MLSDDHIQYFIYQTLRAV  125 (353)
T ss_dssp             ECCCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHH
T ss_pred             EeccC-ccHHHHHhhc-CCCHHHHHHHHHHHHHHH
Confidence            99997 5899998764 578888899999998775

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.56  E-value=2.1e-15  Score=93.48  Aligned_cols=101  Identities=22%  Similarity=0.335  Sum_probs=79.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe-c--------------
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT-G--------------   64 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--------------   64 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+....  ....+|+.+++.++|+|++++.+.+. .              
T Consensus         9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~   86 (383)
T 3eb0_A            9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP--RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDH   86 (383)
T ss_dssp             EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT--TSCCHHHHHHTTCCCTTBCCEEEEEEEC--------------
T ss_pred             EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHHcCCCCccchhheeeecCccccccccccccc
Confidence            677899999999999999886  7899999885321  12236889999999999999999872 1              


Q ss_pred             ------------------------CceEEEEeecCCCChHHHHh----cCCCCchhhhhhhhhccccCC
Q psy9377          65 ------------------------NPVCLVMEYAEGGSLYNELQ----RSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        65 ------------------------~~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~qll~~~  105 (106)
                                              ...+++|||+++ +|.+.+.    ....+++..+..++.|++.||
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL  154 (383)
T 3eb0_A           87 NKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV  154 (383)
T ss_dssp             -----------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence                                    238899999985 7776665    345688889999999998875

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.56  E-value=9e-15  Score=88.75  Aligned_cols=103  Identities=21%  Similarity=0.238  Sum_probs=82.9

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEEecCH-HHHHHHHHHHHHHhcCCC------CceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKHIETE-AERKAFAVEVRQLSRVSH------PNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~------~~i~~~~~~~-~~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++.+.   +..+++|.++.. .....+.+|+.++..++|      ++++++.+.+ ..+..+++
T Consensus        16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv   95 (339)
T 1z57_A           16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIV   95 (339)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEE
T ss_pred             eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEE
Confidence            677899999999999999873   678999998643 334567778877776654      4588999888 45789999


Q ss_pred             EeecCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      ||++ +++|.+++....  .++...+..++.|++.||
T Consensus        96 ~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l  131 (339)
T 1z57_A           96 FELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSV  131 (339)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             EcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence            9999 889999998765  567888889999998775

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.56  E-value=2e-15  Score=94.14  Aligned_cols=100  Identities=24%  Similarity=0.346  Sum_probs=76.7

Q ss_pred             ceeEeecCcceEEEEEEC----CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEEEeecCCC
Q psy9377           5 SKIVGQGAFGVVWKGLWQ----NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLVMEYAEGG   77 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv~e~~~~g   77 (106)
                      .+.||+|+||.||++.+.    +..+++|.+........+.+|+.++..++|||++++.+++.   ....+++|||+.+ 
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-  104 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-  104 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-
Confidence            457999999999999865    57899999875544556788999999999999999999982   3678999999965 


Q ss_pred             ChHHHHhcCC---------CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS---------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~---------~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++....         .+++..++.++.|++.||
T Consensus       105 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al  141 (405)
T 3rgf_A          105 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI  141 (405)
T ss_dssp             EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHH
Confidence            8888886321         377888899999998875

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.56  E-value=9.1e-16  Score=100.81  Aligned_cols=104  Identities=25%  Similarity=0.359  Sum_probs=86.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-------cCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACT-------GNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~l   69 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.++.   ......+.+|+.++..++|||++++.+++.       .+..++
T Consensus        16 Y~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~L   95 (676)
T 3qa8_A           16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLL   95 (676)
T ss_dssp             -CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCC
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEE
Confidence            788999999999999998875  78899998753   234567889999999999999999988762       456899


Q ss_pred             EEeecCCCChHHHHhcCC---CCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSS---AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++|+|.+++....   .+++..+..++.|++.|+
T Consensus        96 VmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL  134 (676)
T 3qa8_A           96 AMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL  134 (676)
T ss_dssp             EEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999998754   477888889999988765

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.56  E-value=1.2e-14  Score=89.32  Aligned_cols=103  Identities=20%  Similarity=0.267  Sum_probs=84.4

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecC-------------HHHHHHHHHHHHHHhcCCCCceeeeeeeEec---
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIET-------------EAERKAFAVEVRQLSRVSHPNIVKLYGACTG---   64 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~-------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---   64 (106)
                      |.+.+.||+|+||.||.+.+. +..+++|.+..             ....+.+.+|+.++..++|||++++.+.+..   
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  103 (362)
T 3pg1_A           24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEE  103 (362)
T ss_dssp             CEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCT
T ss_pred             eEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccC
Confidence            778899999999999999876 78899998742             1123678899999999999999999998821   


Q ss_pred             ---CceEEEEeecCCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          65 ---NPVCLVMEYAEGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        65 ---~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                         ...+++||++. |++.+++.... .++...+..++.|++.||
T Consensus       104 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l  147 (362)
T 3pg1_A          104 PAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGL  147 (362)
T ss_dssp             TTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHH
T ss_pred             CCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence               35799999997 58888887643 678888899999998775

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.56  E-value=2.7e-14  Score=89.84  Aligned_cols=103  Identities=23%  Similarity=0.371  Sum_probs=83.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcC------CCCceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRV------SHPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~------~~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++.. .....+.+|+.++..+      .|+|++++.+.+ ..+..+++|
T Consensus        99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  178 (429)
T 3kvw_A           99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTF  178 (429)
T ss_dssp             EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEE
T ss_pred             EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEE
Confidence            667899999999999999887  688999998643 3345566677766654      577999999988 468899999


Q ss_pred             eecCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      |++. ++|.+++....  .++...++.++.|++.||
T Consensus       179 e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL  213 (429)
T 3kvw_A          179 ELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCL  213 (429)
T ss_dssp             CCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             eccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            9996 58999998654  478888899999998875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.56  E-value=3e-14  Score=86.49  Aligned_cols=103  Identities=22%  Similarity=0.269  Sum_probs=80.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHH-HHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVR-QLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |...+.||+|+||.||++.+.  +..+++|.++..   ........|.. ++..++|||++++.+.+. .+..+++||++
T Consensus        24 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~  103 (327)
T 3aln_A           24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM  103 (327)
T ss_dssp             EEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             hhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeec
Confidence            567889999999999999987  788999988632   23344555555 667789999999999984 57789999999


Q ss_pred             CCCChHHHHhc-----CCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQR-----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~-----~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+ +|.+++..     ...++......++.|++.|+
T Consensus       104 ~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l  138 (327)
T 3aln_A          104 ST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKAL  138 (327)
T ss_dssp             SE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHH
T ss_pred             CC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHH
Confidence            76 88887763     45677888888888887764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.55  E-value=1.7e-14  Score=89.17  Aligned_cols=101  Identities=21%  Similarity=0.227  Sum_probs=83.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-Cc------eE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-NP------VC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~------~~   68 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|||++++.+.+.. +.      .+
T Consensus        44 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~  123 (371)
T 4exu_A           44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY  123 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred             EEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEE
Confidence            566789999999999999887  789999998632    335678889999999999999999999843 22      39


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||++. ++|.+++..  .+++..+..++.|++.||
T Consensus       124 lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL  157 (371)
T 4exu_A          124 LVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGL  157 (371)
T ss_dssp             EEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHH
T ss_pred             EEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHH
Confidence            9999997 588888754  478888899999998775

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.55  E-value=1.5e-14  Score=88.40  Aligned_cols=102  Identities=19%  Similarity=0.203  Sum_probs=78.4

Q ss_pred             CCCc-eeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe-----cCceEEEEee
Q psy9377           2 LGGS-KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT-----GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~-~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~lv~e~   73 (106)
                      |.+. +.||+|+||.||.+.+.  +..+++|.+......  .......+..++|+|++++.+.+.     ....+++|||
T Consensus        30 y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~  107 (336)
T 3fhr_A           30 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA--RQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMEC  107 (336)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH--HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             eEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH--HHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEec
Confidence            4454 46999999999999987  789999998643221  112223355678999999999883     2348999999


Q ss_pred             cCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++....  .+++..+..++.|++.||
T Consensus       108 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l  141 (336)
T 3fhr_A          108 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI  141 (336)
T ss_dssp             CTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999998754  588888999999998775

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.55  E-value=1.5e-14  Score=87.21  Aligned_cols=103  Identities=25%  Similarity=0.383  Sum_probs=80.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-------HHHHHHHHHHHHHhcC---CCCceeeeeeeEec-C---
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-------AERKAFAVEVRQLSRV---SHPNIVKLYGACTG-N---   65 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-------~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~-~---   65 (106)
                      |++.+.||+|+||.||++.+.  +..+++|.+...       .......+|+..+..+   .|||++++.+.+.. .   
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~   90 (308)
T 3g33_A           11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR   90 (308)
T ss_dssp             CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSS
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCC
Confidence            778899999999999999875  788999987521       1123445566655554   59999999999832 2   


Q ss_pred             --ceEEEEeecCCCChHHHHhcCCC--CchhhhhhhhhccccCC
Q psy9377          66 --PVCLVMEYAEGGSLYNELQRSSA--ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        66 --~~~lv~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~qll~~~  105 (106)
                        ..+++||++. ++|.+++.....  +++..+..++.|++.||
T Consensus        91 ~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al  133 (308)
T 3g33_A           91 EIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGL  133 (308)
T ss_dssp             EEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHH
T ss_pred             ceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHH
Confidence              4799999997 599999987653  78889999999998775

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.55  E-value=7.8e-16  Score=95.21  Aligned_cols=103  Identities=12%  Similarity=-0.077  Sum_probs=76.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-----HHHHHHHHHHHH---HHhcCCCCceeeee-------eeEec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-----EAERKAFAVEVR---QLSRVSHPNIVKLY-------GACTG   64 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-----~~~~~~~~~~~~---~~~~~~~~~i~~~~-------~~~~~   64 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+..     ....+.+.+|+.   .+..++|||+++++       +++..
T Consensus        75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~  154 (377)
T 3byv_A           75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD  154 (377)
T ss_dssp             EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEEC
T ss_pred             EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhc
Confidence            456789999999999999865  78999998852     234567888984   44556799999887       44422


Q ss_pred             C------------------ceEEEEeecCCCChHHHHhcCCCCch-------hhhhhhhhccccCC
Q psy9377          65 N------------------PVCLVMEYAEGGSLYNELQRSSAASL-------KFCKIYLPFWFSSS  105 (106)
Q Consensus        65 ~------------------~~~lv~e~~~~g~l~~~l~~~~~~~~-------~~~~~~~~qll~~~  105 (106)
                      .                  ..+++|||+ +|+|.+++...+.+++       .....++.|++.||
T Consensus       155 ~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL  219 (377)
T 3byv_A          155 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLL  219 (377)
T ss_dssp             TTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHH
Confidence            1                  388999999 6799999987554544       55566888888765

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.55  E-value=1.7e-15  Score=92.72  Aligned_cols=103  Identities=17%  Similarity=0.102  Sum_probs=77.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCHH-------------HHHHHHHHHHHHhcCCCCceeeeeeeE-
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETEA-------------ERKAFAVEVRQLSRVSHPNIVKLYGAC-   62 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~~-------------~~~~~~~~~~~~~~~~~~~i~~~~~~~-   62 (106)
                      |.+.+.||+|+||.||++.+.     +..+++|......             ....+.+|+..+..++|+|++++++.+ 
T Consensus        39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~  118 (345)
T 2v62_A           39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGL  118 (345)
T ss_dssp             EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEE
T ss_pred             EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccc
Confidence            567789999999999999884     4678888875321             012355677788889999999999988 


Q ss_pred             e----cCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          63 T----GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        63 ~----~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .    ....+++||++ +++|.+++...+.+++..+..++.|++.||
T Consensus       119 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL  164 (345)
T 2v62_A          119 TEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVL  164 (345)
T ss_dssp             EESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHH
T ss_pred             cccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            3    46689999999 999999998877788999999999998875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.55  E-value=1.7e-14  Score=87.56  Aligned_cols=103  Identities=22%  Similarity=0.298  Sum_probs=83.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEec--CHHHHHHHHHHHHHHhcCC-CCceeeeeeeEe-------c--Cce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIE--TEAERKAFAVEVRQLSRVS-HPNIVKLYGACT-------G--NPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~--~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-------~--~~~   67 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+.  .......+.+|+..+..+. |||++++.+.+.       .  ...
T Consensus        30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~  109 (337)
T 3ll6_A           30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF  109 (337)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred             EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence            567789999999999999985  7889999874  2344567788999999885 999999998882       1  337


Q ss_pred             EEEEeecCCCChHHHHhc---CCCCchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQR---SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++|++. |+|.+++..   .+.++...+..++.|++.||
T Consensus       110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l  149 (337)
T 3ll6_A          110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV  149 (337)
T ss_dssp             EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            99999996 689988865   44688888899999998775

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.54  E-value=2.1e-15  Score=92.52  Aligned_cols=100  Identities=16%  Similarity=0.078  Sum_probs=80.3

Q ss_pred             CCCceeEeecCcceEEEEEEC----------CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceee--------------
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ----------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVK--------------   57 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~----------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~--------------   57 (106)
                      |.+.+.||+|+||.||++.+.          +..+++|.+...   ..+.+|+.++..++|||+++              
T Consensus        44 y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~  120 (352)
T 2jii_A           44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP  120 (352)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred             EEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---chHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence            566789999999999999875          467999988643   34667888888888988876              


Q ss_pred             -eeeeEe--cCceEEEEeecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          58 -LYGACT--GNPVCLVMEYAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        58 -~~~~~~--~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                       +.+.+.  .+..+++|||+ +++|.+++...  ..+++..+..++.|++.||
T Consensus       121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L  172 (352)
T 2jii_A          121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDAL  172 (352)
T ss_dssp             CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHH
T ss_pred             chhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHH
Confidence             444552  46789999999 99999999875  5688899999999998875

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.54  E-value=1.5e-14  Score=89.48  Aligned_cols=103  Identities=22%  Similarity=0.333  Sum_probs=82.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCC--------CCceeeeeeeEe-----cC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVS--------HPNIVKLYGACT-----GN   65 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~--------~~~i~~~~~~~~-----~~   65 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++.. .....+.+|+.++..++        |+|++++.+.+.     ..
T Consensus        39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~  118 (397)
T 1wak_A           39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGT  118 (397)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEE
T ss_pred             EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCc
Confidence            667889999999999999876  788999998743 34566788888888774        778999999883     25


Q ss_pred             ceEEEEeecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          66 PVCLVMEYAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        66 ~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      ..+++||++ ++++.+++...  +.++...+..++.|++.||
T Consensus       119 ~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL  159 (397)
T 1wak_A          119 HICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGL  159 (397)
T ss_dssp             EEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence            689999999 55676666543  4588889999999998875

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.53  E-value=2.4e-14  Score=87.78  Aligned_cols=101  Identities=21%  Similarity=0.221  Sum_probs=82.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec-C------ceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG-N------PVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~------~~~   68 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...    .....+.+|+.++..++|||++++.+.+.. +      ..+
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~  105 (353)
T 3coi_A           26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY  105 (353)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred             EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence            567789999999999999886  789999998532    334667889999999999999999999843 2      359


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||++. ++|.+++..  .+++..+..++.|++.||
T Consensus       106 lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al  139 (353)
T 3coi_A          106 LVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGL  139 (353)
T ss_dssp             EEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHH
T ss_pred             EEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence            9999997 588887754  478888889999998775

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.52  E-value=1.3e-14  Score=92.51  Aligned_cols=103  Identities=20%  Similarity=0.201  Sum_probs=82.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE--ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC--TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~lv~e~~~~g   77 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+........+..|..++..++|.+.+.....+  ..+..+++|||+ ++
T Consensus         9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~   87 (483)
T 3sv0_A            9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GP   87 (483)
T ss_dssp             EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CC
Confidence            678899999999999999986  7899999876443334577888899999875544444444  457789999999 88


Q ss_pred             ChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++.. ...+++..+..++.|++.||
T Consensus        88 sL~~ll~~~~~~l~~~~~~~i~~qi~~aL  116 (483)
T 3sv0_A           88 SLEDLFNFCSRKLSLKTVLMLADQMINRV  116 (483)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            99999985 45688899999999998775

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.52  E-value=6.5e-16  Score=93.34  Aligned_cols=103  Identities=25%  Similarity=0.476  Sum_probs=84.3

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~   76 (106)
                      |++.+.||+|+||.||.+.+.+ .+++|.++..    .....+.+|+.++..++|+|++++.+.+. .+..++++|++++
T Consensus        35 ~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~  113 (319)
T 2y4i_B           35 LEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKG  113 (319)
T ss_dssp             EECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCS
T ss_pred             eEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccC
Confidence            5678899999999999998775 4888887532    11234567888899999999999999984 5779999999999


Q ss_pred             CChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      ++|.+++.... .++...+..++.|++.|+
T Consensus       114 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~al  143 (319)
T 2y4i_B          114 RTLYSVVRDAKIVLDVNKTRQIAQEIVKGM  143 (319)
T ss_dssp             EEHHHHTTSSCCCCCSHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            99999998754 578888889999988765

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.49  E-value=4.3e-15  Score=90.12  Aligned_cols=104  Identities=22%  Similarity=0.388  Sum_probs=85.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH--------HHHHHHHHHHHHhcCC--CCceeeeeeeEe-cCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA--------ERKAFAVEVRQLSRVS--HPNIVKLYGACT-GNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--------~~~~~~~~~~~~~~~~--~~~i~~~~~~~~-~~~~~   68 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.+....        ....+.+|+.++..++  |+|++++.+.+. .+..+
T Consensus        45 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~  124 (320)
T 3a99_A           45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV  124 (320)
T ss_dssp             EEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEE
Confidence            667889999999999999876  7889999885321        1133556788888875  599999999994 57789


Q ss_pred             EEEeecCC-CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEG-GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~-g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|++.+ ++|.+++.....+++..+..++.|++.||
T Consensus       125 lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L  162 (320)
T 3a99_A          125 LILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV  162 (320)
T ss_dssp             EEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            99999976 89999999877888889999999998775

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.49  E-value=3.6e-14  Score=87.30  Aligned_cols=103  Identities=23%  Similarity=0.263  Sum_probs=83.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCC-----------CCceeeeeeeEec---
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVS-----------HPNIVKLYGACTG---   64 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~-----------~~~i~~~~~~~~~---   64 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+... .....+.+|+.++..+.           |+|++++.+.+..   
T Consensus        21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~  100 (373)
T 1q8y_A           21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP  100 (373)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET
T ss_pred             EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCC
Confidence            667889999999999999986  788999998743 33456777888777665           7899999998832   


Q ss_pred             --CceEEEEeecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          65 --NPVCLVMEYAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        65 --~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                        ...+++||++ +++|.+++...  ..++...+..++.|++.||
T Consensus       101 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL  144 (373)
T 1q8y_A          101 NGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGL  144 (373)
T ss_dssp             TEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHH
Confidence              2689999999 88999999863  3477888889999998775

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.49  E-value=1.1e-13  Score=85.73  Aligned_cols=103  Identities=28%  Similarity=0.407  Sum_probs=81.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCC-CC-----ceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVS-HP-----NIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~-~~-----~i~~~~~~~-~~~~~~lv~   71 (106)
                      |.+.+.||+|+||.||++.+.  +..+++|.++.. .....+..|+.++..+. |+     +++.+.+.+ ..+..++||
T Consensus        56 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  135 (382)
T 2vx3_A           56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVF  135 (382)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEE
T ss_pred             EEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEE
Confidence            567789999999999999887  778999998643 33455667777776654 34     488888888 568899999


Q ss_pred             eecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      |++.+ +|.+++...  ..++...++.++.|++.|+
T Consensus       136 e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al  170 (382)
T 2vx3_A          136 EMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTAL  170 (382)
T ss_dssp             ECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHH
T ss_pred             ecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHH
Confidence            99965 999999865  3578888889999988765

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.49  E-value=2.1e-14  Score=88.07  Aligned_cols=103  Identities=27%  Similarity=0.318  Sum_probs=67.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cC-------ceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACT-GN-------PVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~-------~~~lv   70 (106)
                      |.+.+.||+|+||.||.+.+.  +..+++|.+... ........++..+..++|||++++.+++. .+       ..+++
T Consensus        25 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv  104 (360)
T 3e3p_A           25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVV  104 (360)
T ss_dssp             EEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEE
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEE
Confidence            667889999999999999987  788999987532 22234456666777889999999999882 22       27899


Q ss_pred             EeecCCCChHHHHh----cCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQ----RSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||+.+ ++...+.    ....++...+..++.|++.|+
T Consensus       105 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al  142 (360)
T 3e3p_A          105 MEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI  142 (360)
T ss_dssp             EECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             eecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence            999987 5544443    445677788888888887764

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.49  E-value=1.7e-14  Score=88.84  Aligned_cols=103  Identities=14%  Similarity=0.103  Sum_probs=79.1

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCHHH-------------HHHHHHHHHHHhcCCCCceeeeeee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEAE-------------RKAFAVEVRQLSRVSHPNIVKLYGA   61 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~~~~~   61 (106)
                      |.+.+.||+|+||.||++.+.       +..+++|.+.....             ......+...+..++|+|++++++.
T Consensus        37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~  116 (364)
T 3op5_A           37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS  116 (364)
T ss_dssp             EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred             EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence            567789999999999999875       25789998753210             0123344556677889999999998


Q ss_pred             Eec-----CceEEEEeecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          62 CTG-----NPVCLVMEYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        62 ~~~-----~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +..     ...+++|||+ +++|.+++... +.++...+..++.|++.||
T Consensus       117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l  165 (364)
T 3op5_A          117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDIL  165 (364)
T ss_dssp             EEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHH
T ss_pred             eeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            832     4589999999 99999999875 5688899999999998775

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.48  E-value=9.6e-14  Score=84.75  Aligned_cols=103  Identities=19%  Similarity=0.232  Sum_probs=80.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--C-ceEEEEEecCH-HHHHHHHHHHHHHhcCCCCc------eeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N-QYVAVKHIETE-AERKAFAVEVRQLSRVSHPN------IVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~-~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~------i~~~~~~~-~~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++.+.  + ..+++|.++.. .....+.+|+.++..++|++      ++.+.+.+ ..+..+++
T Consensus        21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv  100 (355)
T 2eu9_A           21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIA  100 (355)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred             EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEE
Confidence            667889999999999999886  3 68999998643 33556777888887776544      77887877 45789999


Q ss_pred             EeecCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      ||++ ++++.+++....  .++...+..++.|++.||
T Consensus       101 ~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L  136 (355)
T 2eu9_A          101 FELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL  136 (355)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             Eecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            9999 567777776543  578888899999998775

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.48  E-value=2.9e-14  Score=89.45  Aligned_cols=101  Identities=24%  Similarity=0.420  Sum_probs=79.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~lv~e   72 (106)
                      |...+.||+|+||.||++.+.  +..+++|.+....  ....+|+.++..++|+|++++.+++..       ...+++||
T Consensus        56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e  133 (420)
T 1j1b_A           56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD  133 (420)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT--TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred             EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc--hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence            567789999999999999986  7889999885321  123368899999999999999988721       23678999


Q ss_pred             ecCCCChHHHHh----cCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQ----RSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~----~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++ ++.+.+.    ....+++..++.++.|++.||
T Consensus       134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL  169 (420)
T 1j1b_A          134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL  169 (420)
T ss_dssp             CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            9976 6666654    245688888899999998775

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.48  E-value=1e-13  Score=83.59  Aligned_cols=103  Identities=20%  Similarity=0.269  Sum_probs=72.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HH-HHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AE-RKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~   74 (106)
                      |...+.||+|+||.||++.+.  +..+++|.+...   .. .+.+..+..++..++|||++++.+.+. .+..+++||++
T Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~  106 (318)
T 2dyl_A           27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM  106 (318)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc
Confidence            456789999999999999986  789999988632   22 223334445677789999999999984 57799999999


Q ss_pred             CCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                       ++.+..+... ...+++..+..++.|++.|+
T Consensus       107 -~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l  137 (318)
T 2dyl_A          107 -GTCAEKLKKRMQGPIPERILGKMTVAIVKAL  137 (318)
T ss_dssp             -SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred             -CCcHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence             5566555544 45678888888999888765

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.47  E-value=4.2e-14  Score=88.07  Aligned_cols=101  Identities=25%  Similarity=0.407  Sum_probs=76.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe-cC------ceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT-GN------PVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~------~~~lv~e~   73 (106)
                      |...+.||+|+||.||.+.+. +..+++|.+....  ....+|+.++..++|||++++.+++. .+      ..+++|||
T Consensus        42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~--~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~  119 (394)
T 4e7w_A           42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK--RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY  119 (394)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT--TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred             EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc--chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence            667889999999999999987 5668888764221  11235888999999999999999882 22      27899999


Q ss_pred             cCCCChHHHHh----cCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQ----RSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~----~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++++ +...+.    ....+++..++.++.|++.||
T Consensus       120 ~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL  154 (394)
T 4e7w_A          120 VPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSL  154 (394)
T ss_dssp             CSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH
T ss_pred             cCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            9874 444433    245688888899999998775

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.47  E-value=6.1e-14  Score=84.94  Aligned_cols=103  Identities=24%  Similarity=0.365  Sum_probs=78.7

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEEecCH----HHHHHHHHHHHHHhc---CCCCceeeeeeeEe------cC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKHIETE----AERKAFAVEVRQLSR---VSHPNIVKLYGACT------GN   65 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~----~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~------~~   65 (106)
                      |.+.+.||+|+||.||++.+.   +..+++|.++..    .....+.+|+.++..   +.|||++++++.+.      ..
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   92 (326)
T 1blx_A           13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   92 (326)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred             eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence            677899999999999999883   678999987521    111234455555554   48999999999873      25


Q ss_pred             ceEEEEeecCCCChHHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          66 PVCLVMEYAEGGSLYNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        66 ~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      ..++++|++. |+|.+++....  .++...+..++.|++.||
T Consensus        93 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l  133 (326)
T 1blx_A           93 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGL  133 (326)
T ss_dssp             EEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence            5899999997 59999998643  377888889999988765

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.46  E-value=1.2e-13  Score=86.95  Aligned_cols=100  Identities=21%  Similarity=0.199  Sum_probs=73.9

Q ss_pred             CceeEeecCcceEEEEEEC-CceEEEEEecCHHHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEEEEeecCCCChH
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEAERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCLVMEYAEGGSLY   80 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~lv~e~~~~g~l~   80 (106)
                      ..+.||+|+||.||.+... +..+++|.+... ....+.+|+.++..+ +|||++++++.+. .+..+++||++. |+|.
T Consensus        19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~   96 (434)
T 2rio_A           19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ   96 (434)
T ss_dssp             EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred             ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence            4578999999999765443 889999988543 234567888888765 8999999999884 477999999996 5999


Q ss_pred             HHHhcCCCCc-------hhhhhhhhhccccCC
Q psy9377          81 NELQRSSAAS-------LKFCKIYLPFWFSSS  105 (106)
Q Consensus        81 ~~l~~~~~~~-------~~~~~~~~~qll~~~  105 (106)
                      +++.......       +..+..++.|++.||
T Consensus        97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  128 (434)
T 2rio_A           97 DLVESKNVSDENLKLQKEYNPISLLRQIASGV  128 (434)
T ss_dssp             HHHHTC------------CCHHHHHHHHHHHH
T ss_pred             HHHhccCCCchhhhhccchhHHHHHHHHHHHH
Confidence            9998754322       223346788887765

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.44  E-value=6.5e-14  Score=88.22  Aligned_cols=102  Identities=23%  Similarity=0.246  Sum_probs=77.4

Q ss_pred             CCCceeEeecCcceEEE-EEECCceEEEEEecCHHHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWK-GLWQNQYVAVKHIETEAERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |...+.||+|+||.|+. +...+..+++|.+.... .....+|+.++..+ +|||++++++.+ .....+++||++. |+
T Consensus        26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~-~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~  103 (432)
T 3p23_A           26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC-FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-AT  103 (432)
T ss_dssp             EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT-EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred             EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH-HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CC
Confidence            45678999999999654 33448899999885421 12245688888888 799999999988 4577899999996 59


Q ss_pred             hHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++.... ......+..++.|++.||
T Consensus       104 L~~~l~~~~~~~~~~~~~~i~~qi~~aL  131 (432)
T 3p23_A          104 LQEYVEQKDFAHLGLEPITLLQQTTSGL  131 (432)
T ss_dssp             HHHHHHSSSCCCCSSCHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCccchhHHHHHHHHHHHH
Confidence            999998654 344556678888888765

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.43  E-value=2.6e-13  Score=83.75  Aligned_cols=102  Identities=15%  Similarity=-0.019  Sum_probs=64.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHH---HHHhcCCCCceeeee-------eeEe-
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEV---RQLSRVSHPNIVKLY-------GACT-   63 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~---~~~~~~~~~~i~~~~-------~~~~-   63 (106)
                      |...+.||+|+||.||.+.+.  +..+++|.+...     .....+.+|+   ..+.. +|||++++.       +.+. 
T Consensus        64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~  142 (371)
T 3q60_A           64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAV  142 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEE
T ss_pred             eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheec
Confidence            556789999999999999987  788999998642     2234566664   44555 799977744       3331 


Q ss_pred             c-----------------CceEEEEeecCCCChHHHHhcCCCCchhhhh-------hhhhccccCC
Q psy9377          64 G-----------------NPVCLVMEYAEGGSLYNELQRSSAASLKFCK-------IYLPFWFSSS  105 (106)
Q Consensus        64 ~-----------------~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~-------~~~~qll~~~  105 (106)
                      .                 ...++||||++ |+|.+++...+......++       .++.|++.||
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL  207 (371)
T 3q60_A          143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLA  207 (371)
T ss_dssp             TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHH
Confidence            1                 23799999998 7999999874322233333       4458888765

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.37  E-value=9e-13  Score=78.99  Aligned_cols=94  Identities=15%  Similarity=0.150  Sum_probs=70.5

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCHH--------------------HHHHHHHHHHHHhcCCCCceeeeee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETEA--------------------ERKAFAVEVRQLSRVSHPNIVKLYG   60 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--------------------~~~~~~~~~~~~~~~~~~~i~~~~~   60 (106)
                      |++.+.||+|+||.||.+.+. +..+++|.++...                    ....+.+|+.++..++  | +++.+
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~  168 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK  168 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred             EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence            445689999999999999886 7899999885321                    2456788999999998  5 66666


Q ss_pred             eEecCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          61 ACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        61 ~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+..+..+++|||++||+|.+ +..      ..+..++.|++.|+
T Consensus       169 ~~~~~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l  206 (282)
T 1zar_A          169 VYAWEGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEV  206 (282)
T ss_dssp             EEEEETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHH
T ss_pred             EEeccceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHH
Confidence            666677899999999999988 432      23345677766554

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.35  E-value=8e-13  Score=85.35  Aligned_cols=93  Identities=17%  Similarity=0.082  Sum_probs=65.4

Q ss_pred             ceeEeecCcceEEEEEECCceEEEEEecC-----HH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           5 SKIVGQGAFGVVWKGLWQNQYVAVKHIET-----EA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~-----~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      .+.||+|+||.||++...+..+++|....     ..     ..+.+.+|+.++..++|||++++.... ..+..+++|||
T Consensus       341 ~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~  420 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY  420 (540)
T ss_dssp             -------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred             CCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence            46899999999999976688888887531     11     134578999999999999999554433 45677999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++|.+++..        ...++.|++.+|
T Consensus       421 ~~ggsL~~~l~~--------~~~i~~qi~~aL  444 (540)
T 3en9_A          421 INGKLAKDVIED--------NLDIAYKIGEIV  444 (540)
T ss_dssp             CCSEEHHHHSTT--------CTHHHHHHHHHH
T ss_pred             CCCCCHHHHHHH--------HHHHHHHHHHHH
Confidence            999999999876        446667666554

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.31  E-value=1.9e-12  Score=84.08  Aligned_cols=80  Identities=15%  Similarity=0.096  Sum_probs=65.8

Q ss_pred             CceEEEEEecCH------------HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEeecCCCChHHHHhcCCC
Q psy9377          23 NQYVAVKHIETE------------AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSA   88 (106)
Q Consensus        23 ~~~~~~k~~~~~------------~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e~~~~g~l~~~l~~~~~   88 (106)
                      +..+++|.+...            ...+.+.+|+.++..+ .|+|++++++.+ +.+..|+||||++|++|.++|++.++
T Consensus       259 g~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~  338 (569)
T 4azs_A          259 GEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEE  338 (569)
T ss_dssp             CSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCC
T ss_pred             cceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCC
Confidence            777899987421            2345689999999998 699999999999 45789999999999999999998876


Q ss_pred             CchhhhhhhhhccccCC
Q psy9377          89 ASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        89 ~~~~~~~~~~~qll~~~  105 (106)
                      ++.   ..++.|++.||
T Consensus       339 l~~---~~I~~QIl~AL  352 (569)
T 4azs_A          339 IDR---EKILGSLLRSL  352 (569)
T ss_dssp             CCH---HHHHHHHHHHH
T ss_pred             CCH---HHHHHHHHHHH
Confidence            654   35889998876

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.00  E-value=2.6e-10  Score=67.48  Aligned_cols=100  Identities=15%  Similarity=0.014  Sum_probs=65.6

Q ss_pred             CCCceeEeecCcceEEEEEE--CCce--EEEEEecCH--H------------------------HHHHHHHHHHHHhcCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLW--QNQY--VAVKHIETE--A------------------------ERKAFAVEVRQLSRVS   51 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~--~~~~--~~~k~~~~~--~------------------------~~~~~~~~~~~~~~~~   51 (106)
                      |++.+.||+|+||.||.+.+  .+..  +++|.++..  .                        ....+.+|...+..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            45668899999999999987  3778  999986421  1                        1135778888888887


Q ss_pred             CCceeeeeeeEecCceEEEEeecCC-C----ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          52 HPNIVKLYGACTGNPVCLVMEYAEG-G----SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        52 ~~~i~~~~~~~~~~~~~lv~e~~~~-g----~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++. ....+..+..++||||+.+ |    +|.+....   .+...+..++.|++.++
T Consensus       129 ~~~i~-~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l  183 (258)
T 1zth_A          129 EAGVS-VPQPYTYMKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENV  183 (258)
T ss_dssp             HTTCC-CCCEEEEETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHH
T ss_pred             hCCCC-CCeEEEcCCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHH
Confidence            66532 1122222467899999942 3    66665432   23445667777776654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.73  E-value=6.5e-09  Score=64.95  Aligned_cols=98  Identities=8%  Similarity=-0.051  Sum_probs=59.3

Q ss_pred             CCCCceeEeecCcceEEEEEEC-CceEEEEEecCH-------------------H-----HHHHHHHHHHHHhcCCCCce
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-------------------A-----ERKAFAVEVRQLSRVSHPNI   55 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-------------------~-----~~~~~~~~~~~~~~~~~~~i   55 (106)
                      .|++...||+|++|.||.+... |..+|+|.++..                   .     ...+...|...+..+.+.++
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            4778899999999999999877 889999976410                   0     01122344555555433322


Q ss_pred             eeeeeeEecCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          56 VKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        56 ~~~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      . ....+.....+++|||++|+++..+..      .+.+..+..|++.++
T Consensus       176 ~-vp~p~~~~~~~LVME~i~G~~L~~l~~------~~~~~~l~~qll~~l  218 (397)
T 4gyi_A          176 P-VPEPIAQSRHTIVMSLVDALPMRQVSS------VPDPASLYADLIALI  218 (397)
T ss_dssp             S-CCCEEEEETTEEEEECCSCEEGGGCCC------CSCHHHHHHHHHHHH
T ss_pred             C-CCeeeeccCceEEEEecCCccHhhhcc------cHHHHHHHHHHHHHH
Confidence            1 111222223479999999888765432      233455666766553

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.72  E-value=8.4e-09  Score=64.69  Aligned_cols=102  Identities=12%  Similarity=-0.129  Sum_probs=66.0

Q ss_pred             CCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCC-Cce---------------eeee
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSH-PNI---------------VKLY   59 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~-~~i---------------~~~~   59 (106)
                      ...+.||+|+||.||++.+.  +..+++|.+...     ...+.+.+|+.++..+.| ++.               ..+.
T Consensus        81 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  160 (413)
T 3dzo_A           81 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP  160 (413)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECC
T ss_pred             EEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccC
Confidence            34578999999999999987  889999988621     113567788888888876 211               1110


Q ss_pred             ------eeEe------cCceEEEEeecCCCChHHHHhc-------CCCCchhhhhhhhhccccCC
Q psy9377          60 ------GACT------GNPVCLVMEYAEGGSLYNELQR-------SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        60 ------~~~~------~~~~~lv~e~~~~g~l~~~l~~-------~~~~~~~~~~~~~~qll~~~  105 (106)
                            ....      ....+++|+.+ +++|.++++.       ...+++.....++.|++.||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL  224 (413)
T 3dzo_A          161 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLL  224 (413)
T ss_dssp             C---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHH
Confidence                  1111      13467777766 5699988852       12344556667778887765

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.65  E-value=7.6e-05  Score=43.84  Aligned_cols=79  Identities=15%  Similarity=0.029  Sum_probs=55.5

Q ss_pred             CceeEeecCcceEEEEEECCceEEEEEecCH--HHHHHHHHHHHHHhcCC-CCceeeeeeeE-ecCceEEEEeecCCCCh
Q psy9377           4 GSKIVGQGAFGVVWKGLWQNQYVAVKHIETE--AERKAFAVEVRQLSRVS-HPNIVKLYGAC-TGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~lv~e~~~~g~l   79 (106)
                      +....+.++.+.||+....+..+++|..+..  .....+.+|..++..+. +..+.++.+.. ..+..+++||+++|.++
T Consensus        18 ~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l   97 (263)
T 3tm0_A           18 CVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLC   97 (263)
T ss_dssp             EEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEH
T ss_pred             eEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeeh
Confidence            3445566777889988766788999987532  12234667777777664 45566666666 45678999999999988


Q ss_pred             HHH
Q psy9377          80 YNE   82 (106)
Q Consensus        80 ~~~   82 (106)
                      .+.
T Consensus        98 ~~~  100 (263)
T 3tm0_A           98 SEE  100 (263)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            765

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.65  E-value=0.0026  Score=39.05  Aligned_cols=76  Identities=17%  Similarity=0.285  Sum_probs=50.1

Q ss_pred             ceeEeecCcceEEEEEECCceEEEEEec--CHH---HHHHHHHHHHHHhcCCC--CceeeeeeeEec----CceEEEEee
Q psy9377           5 SKIVGQGAFGVVWKGLWQNQYVAVKHIE--TEA---ERKAFAVEVRQLSRVSH--PNIVKLYGACTG----NPVCLVMEY   73 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~--~~~---~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~----~~~~lv~e~   73 (106)
                      .+.++.|.+..+|.....+..+++|...  ...   ....+.+|..++..+..  ..+.+++..+..    +..+++||+
T Consensus        43 ~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~  122 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF  122 (359)
T ss_dssp             EEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred             EEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence            3567888889999877667778888765  221   23456778888877753  445666666632    448999999


Q ss_pred             cCCCChH
Q psy9377          74 AEGGSLY   80 (106)
Q Consensus        74 ~~~g~l~   80 (106)
                      ++|..+.
T Consensus       123 v~G~~l~  129 (359)
T 3dxp_A          123 VSGRVLW  129 (359)
T ss_dssp             CCCBCCC
T ss_pred             cCCeecC
Confidence            9987764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.60  E-value=0.0015  Score=37.99  Aligned_cols=70  Identities=16%  Similarity=0.094  Sum_probs=45.3

Q ss_pred             ecCcceEEEEEEC-CceEEEEEecCHHHHHHHHHHHHHHhcCCCCc--eeeeeeeEe-cCceEEEEeecCCCChH
Q psy9377          10 QGAFGVVWKGLWQ-NQYVAVKHIETEAERKAFAVEVRQLSRVSHPN--IVKLYGACT-GNPVCLVMEYAEGGSLY   80 (106)
Q Consensus        10 ~g~~~~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~-~~~~~lv~e~~~~g~l~   80 (106)
                      .|..+.+|+.... +..+++|..... ....+.+|..++..+.+.+  +.++..... ++..+++||+++|.++.
T Consensus        30 gg~~~~v~~~~~~~g~~~vlK~~~~~-~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           30 GCSDAAVFRLSAQGRPVLFVKTDLSG-ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             TTSSCEEEEEECTTSCCEEEEEECSC-TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CCCCceEEEEecCCCCeEEEEeCCcc-cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence            4455889987655 567888987543 2233556776666654333  444555553 46689999999998774

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=95.31  E-value=0.2  Score=30.15  Aligned_cols=75  Identities=12%  Similarity=0.048  Sum_probs=49.7

Q ss_pred             ceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCC---ceeeeeeeEe--cCceEEEEeecCCCCh
Q psy9377           5 SKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHP---NIVKLYGACT--GNPVCLVMEYAEGGSL   79 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~--~~~~~lv~e~~~~g~l   79 (106)
                      .+.++.|....+|..   +..+++|.-........+.+|..++..+.+.   .+.+......  .+..+++|++++|.++
T Consensus        24 v~~l~~G~~n~v~~v---g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l  100 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQIL  100 (306)
T ss_dssp             EEEEEECSSEEEEEE---TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEEC
T ss_pred             eeecCCCcceeEEEE---CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeEC
Confidence            356777777777765   6678888765444456778888888877542   2233333332  3557899999999887


Q ss_pred             HHH
Q psy9377          80 YNE   82 (106)
Q Consensus        80 ~~~   82 (106)
                      .+.
T Consensus       101 ~~~  103 (306)
T 3tdw_A          101 GED  103 (306)
T ss_dssp             HHH
T ss_pred             chh
Confidence            653

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.16  E-value=0.071  Score=31.72  Aligned_cols=74  Identities=14%  Similarity=0.056  Sum_probs=44.7

Q ss_pred             ceeEeecCcceEEEEEEC-CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCC
Q psy9377           5 SKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGS   78 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~   78 (106)
                      .+.+|.|..+.+|+.... |+.+.+|.-...  .....+..|...+..+....-++.......+..+++||+..++.
T Consensus        20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~~~lv~e~l~~~~   96 (288)
T 3f7w_A           20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDERP   96 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCCC
T ss_pred             EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccCceEEEEeecccC
Confidence            356888999999998877 788999976422  11233556777666553221122222222234578999987654

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=95.07  E-value=0.25  Score=30.10  Aligned_cols=73  Identities=23%  Similarity=0.227  Sum_probs=48.5

Q ss_pred             eeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCC---CCceeeeeeeEe-cCceEEEEeecCCCCh
Q psy9377           6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVS---HPNIVKLYGACT-GNPVCLVMEYAEGGSL   79 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~-~~~~~lv~e~~~~g~l   79 (106)
                      +.++.|....+|.....+..+++|..... ....+..|...+..+.   ...+.++..... .+..+++||+++|..+
T Consensus        42 ~~l~gG~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           42 EKLYSGEMNEIWLINDEVQTVFVKINERS-YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             EEECCSSSSEEEEEESSSCEEEEEEEEGG-GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             EEeCCccceeeeEEEECCCeEEEEeCCcc-cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            56788888889987655677888876432 3445666766665542   234445555443 4678999999988754

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=94.80  E-value=0.083  Score=32.91  Aligned_cols=72  Identities=18%  Similarity=0.208  Sum_probs=42.7

Q ss_pred             ceeEeecCcceEEEEEEC--CceEEEEEecCHH---------HHHHHHHHHHHHhcCCC--Cc-eeeeeeeEecCceEEE
Q psy9377           5 SKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---------ERKAFAVEVRQLSRVSH--PN-IVKLYGACTGNPVCLV   70 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---------~~~~~~~~~~~~~~~~~--~~-i~~~~~~~~~~~~~lv   70 (106)
                      .+.+|.|..+.+|++...  +..+++|...+..         .......|..++..+..  +. +.+++. +..+..+++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~-~d~~~~~lv  113 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY-SDTEMAVTV  113 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE-EETTTTEEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEE-EcCCccEEE
Confidence            356888999999998543  5778888754211         11234566666665421  22 223332 345567899


Q ss_pred             EeecCCC
Q psy9377          71 MEYAEGG   77 (106)
Q Consensus        71 ~e~~~~g   77 (106)
                      ||++++.
T Consensus       114 mE~l~g~  120 (397)
T 2olc_A          114 MEDLSHL  120 (397)
T ss_dssp             ECCCTTS
T ss_pred             EEeCCCc
Confidence            9999764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=93.47  E-value=0.63  Score=27.15  Aligned_cols=76  Identities=13%  Similarity=0.144  Sum_probs=46.6

Q ss_pred             EeecCcc-eEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCC-CCceeeeeeeE-ecCceEEEEeecCCCChHHH
Q psy9377           8 VGQGAFG-VVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNE   82 (106)
Q Consensus         8 lg~g~~~-~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~lv~e~~~~g~l~~~   82 (106)
                      +..|..+ .+|+....  +..+.+|.-.. .....+.+|...+..+. +-.+.++.... ..+..+++|++++|.++.+.
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~  110 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKG-SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV  110 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEET-HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCC-CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence            3344443 47765444  45678887643 33445667777766553 22344555555 45778999999999887665


Q ss_pred             Hh
Q psy9377          83 LQ   84 (106)
Q Consensus        83 l~   84 (106)
                      ..
T Consensus       111 ~~  112 (272)
T 4gkh_A          111 LE  112 (272)
T ss_dssp             HH
T ss_pred             cc
Confidence            43

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=92.62  E-value=0.24  Score=29.67  Aligned_cols=75  Identities=16%  Similarity=0.080  Sum_probs=47.0

Q ss_pred             ceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCC-CCc--eeeeeeeEec----CceEEEEeecCCC
Q psy9377           5 SKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVS-HPN--IVKLYGACTG----NPVCLVMEYAEGG   77 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~--i~~~~~~~~~----~~~~lv~e~~~~g   77 (106)
                      .+.++.|....+|..   +..+++|..........+.+|..++..+. +..  +.........    ...|+||++++|.
T Consensus        25 i~~~~~G~~n~v~~v---~~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~  101 (304)
T 3sg8_A           25 IEISGEGNDCIAYEI---NRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGV  101 (304)
T ss_dssp             CCEEEECSSEEEEES---TTSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCE
T ss_pred             eEecCCCCcceEEEE---CCEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCe
Confidence            356788888877764   35678887655544566778888877653 322  2222222211    2358899999998


Q ss_pred             ChHHH
Q psy9377          78 SLYNE   82 (106)
Q Consensus        78 ~l~~~   82 (106)
                      ++.+.
T Consensus       102 ~l~~~  106 (304)
T 3sg8_A          102 PLTPL  106 (304)
T ss_dssp             ECCHH
T ss_pred             ECCcc
Confidence            87643

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=85.99  E-value=1.5  Score=26.31  Aligned_cols=71  Identities=20%  Similarity=0.326  Sum_probs=36.6

Q ss_pred             eEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhc-----CCCCceeeee-e-eE--ecCceEEEEeecCCC
Q psy9377           7 IVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSR-----VSHPNIVKLY-G-AC--TGNPVCLVMEYAEGG   77 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~-~-~~--~~~~~~lv~e~~~~g   77 (106)
                      .++.|....+|+....+..+++|......  .....+..++..     +..|.++... + .+  ..+..+++++|++|.
T Consensus        39 ~l~gG~~n~~~~v~~~~~~~vlk~~~~~~--~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~G~  116 (346)
T 2q83_A           39 VIQGNQMALVWKVHTDSGAVCLKRIHRPE--KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGR  116 (346)
T ss_dssp             ECC----CEEEEEEETTEEEEEEEECSCH--HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCCCB
T ss_pred             eccccccCcEEEEEeCCCCEEEEecCCCH--HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeecCc
Confidence            45456677888877666668889886422  112222222222     2234443311 1 11  346678999999886


Q ss_pred             Ch
Q psy9377          78 SL   79 (106)
Q Consensus        78 ~l   79 (106)
                      ++
T Consensus       117 ~~  118 (346)
T 2q83_A          117 PF  118 (346)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=84.08  E-value=0.7  Score=28.21  Aligned_cols=76  Identities=12%  Similarity=0.039  Sum_probs=43.0

Q ss_pred             eeE-eecCcceEEEEEEC--------CceEEEEEecCHH-----HHHHHHHHHHHHhcCC---CCceeeeeeeEec----
Q psy9377           6 KIV-GQGAFGVVWKGLWQ--------NQYVAVKHIETEA-----ERKAFAVEVRQLSRVS---HPNIVKLYGACTG----   64 (106)
Q Consensus         6 ~~l-g~g~~~~v~~~~~~--------~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~----   64 (106)
                      +.+ +.|....+|.....        +..+++|......     ....+.+|..++..+.   ...+.+++.....    
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            345 56666778876543        4567777654322     1123455666555442   2234444444422    


Q ss_pred             CceEEEEeecCCCChHH
Q psy9377          65 NPVCLVMEYAEGGSLYN   81 (106)
Q Consensus        65 ~~~~lv~e~~~~g~l~~   81 (106)
                      +..+++||+++|.++.+
T Consensus       106 g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             SSCEEEEECCCCBCCCB
T ss_pred             CCceEEEEecCCCChhh
Confidence            35789999998876543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	106
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-28
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-26
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-26
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	8e-25
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	9e-25
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-24
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-24
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-24
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-23
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-23
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-23
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-23
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-23
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	8e-23
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-22
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-22
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-22
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-22
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-22
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-22
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-22
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-22
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	9e-22
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-21
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-21
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-21
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-21
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-20
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-20
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-20
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-20
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-20
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-19
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-19
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-19
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-19
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-18
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-18
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-18
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	8e-18
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	9e-18
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-17
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-17
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-17
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-17
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-17
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-16
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-16
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-16
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-16
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-15
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-15
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-15
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-14
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-14
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-13
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-13
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-13
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-12
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	3e-07

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 3e-28
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT-- 63
           + +G+G FG V  G ++   VAVK I+ +A  +AF  E   ++++ H N+V+L G     
Sbjct: 13  QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 72

Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASL 91
              + +V EY   GSL + L+    + L
Sbjct: 73  KGGLYIVTEYMAKGSLVDYLRSRGRSVL 100

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (240), Expect = 1e-26
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 6   KIVGQGAFGVVWKGLWQ-NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           + +G G FG VW G +  +  VAVK + +      AF  E   + ++ H  +V+LY   T
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78

Query: 64  GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
             P+ ++ EY E GSL + L+  S   L   K+ 
Sbjct: 79  QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.0 bits (236), Expect = 6e-26
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 6  KIVGQGAFGVVWKGLWQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
          + +G G+FG V+KG W    VAVK +     T  + +AF  EV  L +  H NI+   G 
Sbjct: 14 QRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72

Query: 62 CTGNPVCLVMEYAEGGSLYNELQR 85
           T   + +V ++ EG SLY+ L  
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHI 96

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 92.8 bits (230), Expect = 8e-25
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
            ++G GAF  V     +   + VA+K I     E +  +   E+  L ++ HPNIV L  
Sbjct: 15  DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 74

Query: 61  AC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
              +G  + L+M+   GG L++ +      + +     +
Sbjct: 75  IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 113

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.6 bits (229), Expect = 9e-25
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 6   KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFA-VEVRQLSRVSHPNIVKLYGAC-- 62
           + +G+G FG VW+G W+ + VAVK   +  ER  F   E+ Q   + H NI+    A   
Sbjct: 9   ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 68

Query: 63  ---TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
              T   + LV +Y E GSL++ L R +       K+ L
Sbjct: 69  DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 107

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 92.4 bits (229), Expect = 2e-24
 Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI--ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           + +G GAFGVV + + +   +    K I      ++     E+  ++++ HP ++ L+ A
Sbjct: 35  EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 94

Query: 62  C-TGNPVCLVMEYAEGGSLYNELQR 85
                 + L++E+  GG L++ +  
Sbjct: 95  FEDKYEMVLILEFLSGGELFDRIAA 119

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.5 bits (224), Expect = 4e-24
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 9   GQGAFGVVWKGLW----QNQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           G G FG V +G++    +   VA+K ++    +A+ +    E + + ++ +P IV+L G 
Sbjct: 18  GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 77

Query: 62  CTGNPVCLVMEYAEGGSLYNELQR 85
           C    + LVME A GG L+  L  
Sbjct: 78  CQAEALMLVMEMAGGGPLHKFLVG 101

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.2 bits (223), Expect = 5e-24
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 8/101 (7%)

Query: 6   KIVGQGAFGVVWKGLWQN----QYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVK 57
           K +G G FG V KG +Q     + VAVK +       A +     E   + ++ +P IV+
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72

Query: 58  LYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           + G C      LVME AE G L   LQ++     K     +
Sbjct: 73  MIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 113

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.1 bits (223), Expect = 1e-23
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYG 60
             +G G  GVV+K   +     +A K I  E   A R     E++ L   + P IV  YG
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71

Query: 61  AC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           A  +   + + ME+ +GGSL   L+++     +      
Sbjct: 72  AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 1e-23
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 3/82 (3%)

Query: 6  KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          K +G G FGVV  G W+ QY VA+K I E       F  E + +  +SH  +V+LYG CT
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69

Query: 64 -GNPVCLVMEYAEGGSLYNELQ 84
             P+ ++ EY   G L N L+
Sbjct: 70 KQRPIFIITEYMANGCLLNYLR 91

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 90.1 bits (223), Expect = 1e-23
 Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI--ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           + +G GAFGVV +   +      A K +    E++++    E++ +S + HP +V L+ A
Sbjct: 32  EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 91

Query: 62  C-TGNPVCLVMEYAEGGSLYNELQR 85
               N + ++ E+  GG L+ ++  
Sbjct: 92  FEDDNEMVMIYEFMSGGELFEKVAD 116

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.5 bits (219), Expect = 2e-23
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
             +G G++G   K   +   + +  K ++    TEAE++    EV  L  + HPNIV+ Y
Sbjct: 10  YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 69

Query: 60  GAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
                 T   + +VMEY EGG L + + + +
Sbjct: 70  DRIIDRTNTTLYIVMEYCEGGDLASVITKGT 100

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.4 bits (216), Expect = 4e-23
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 6  KIVGQGAFGVVWKGLWQN-QYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
          + +G G FG+V  G W N   VA+K I E     + F  E   + ++SHP +V+LYG C 
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70

Query: 64 -GNPVCLVMEYAEGGSLYN 81
             P+CLV E+ E G L +
Sbjct: 71 EQAPICLVFEFMEHGCLSD 89

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 8e-23
 Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 12/93 (12%)

Query: 6   KIVGQGAFGVVWKGLWQ-------NQYVAVKHI---ETEAERKAFAVEVRQLSRVS-HPN 54
           K +G GAFG V +              VAVK +       ER+A   E++ LS +  H N
Sbjct: 29  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88

Query: 55  IVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
           IV L GAC  G P  ++ EY   G L N L+R 
Sbjct: 89  IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 121

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.4 bits (216), Expect = 1e-22
 Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 8/101 (7%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G G+FG V+       ++ VA+K +     ++  + +    EVR L ++ HPN ++ 
Sbjct: 21  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            G     +   LVMEY  G +                    
Sbjct: 81  RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT 121

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 1e-22
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 8/84 (9%)

Query: 6  KIVGQGAFGVVWKGLWQN-----QYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
          + +G+G FG V +G++ +       VA+K  +   +++ R+ F  E   + +  HP+IVK
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72

Query: 58 LYGACTGNPVCLVMEYAEGGSLYN 81
          L G  T NPV ++ME    G L +
Sbjct: 73 LIGVITENPVWIIMELCTLGELRS 96

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (213), Expect = 2e-22
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI--ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
             +G GAFG V+K   +  +   A K I  ++E E + + VE+  L+   HPNIVKL  A
Sbjct: 18  GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77

Query: 62  C-TGNPVCLVMEYAEGGSLYNELQR 85
               N + +++E+  GG++   +  
Sbjct: 78  FYYENNLWILIEFCAGGAVDAVMLE 102

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (212), Expect = 3e-22
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 8/101 (7%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           KI+G+G+F  V        ++  A+K     HI  E +      E   +SR+ HP  VKL
Sbjct: 14  KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           Y        +   + YA+ G L   +++  +      + Y 
Sbjct: 74  YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 114

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.2 bits (210), Expect = 3e-22
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)

Query: 6  KIVGQGAFGVVWKGLW-----QNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNI 55
          + +G G+FGVV +G W     +   VAVK      +        F  EV  +  + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73

Query: 56 VKLYGACTGNPVCLVMEYAEGGSLYN 81
          ++LYG     P+ +V E A  GSL +
Sbjct: 74 IRLYGVVLTPPMKMVTELAPLGSLLD 99

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 3e-22
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 6  KIVGQGAFGVVWKGLWQN-QYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
            +GQG FG VW G W     VA+K +       +AF  E + + ++ H  +V+LY   +
Sbjct: 23 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 82

Query: 64 GNPVCLVMEYAEGGSLY 80
            P+ +V EY   GSL 
Sbjct: 83 EEPIYIVTEYMSKGSLL 99

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 84.8 bits (209), Expect = 7e-22
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 12/105 (11%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKL 58
           +I+G G    V        ++ VAVK +        +    F  E +  + ++HP IV +
Sbjct: 13  EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 72

Query: 59  YGACT-----GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           Y         G    +VMEY +G +L + +      + K     +
Sbjct: 73  YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVI 117

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 8e-22
 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 5/85 (5%)

Query: 6   KIVGQGAFGVVWKG--LWQNQYVAVK--HIETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
           + +GQGA G V+    +   Q VA++  +++ + +++    E+  +    +PNIV    +
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 62  C-TGNPVCLVMEYAEGGSLYNELQR 85
              G+ + +VMEY  GGSL + +  
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTE 110

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 9e-22
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 12/92 (13%)

Query: 6   KIVGQGAFGVVWKGLW-------QNQYVAVKHI---ETEAERKAFAVEVRQLSRV-SHPN 54
           K++G GAFG V             +  VAVK +      +ER+A   E++ ++++ SH N
Sbjct: 43  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 102

Query: 55  IVKLYGAC-TGNPVCLVMEYAEGGSLYNELQR 85
           IV L GAC    P+ L+ EY   G L N L+ 
Sbjct: 103 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 134

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (207), Expect = 1e-21
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 11/104 (10%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLY 59
             +G+G+F  V+KGL       VA   ++    T++ER+ F  E   L  + HPNIV+ Y
Sbjct: 15  IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 74

Query: 60  GAC-----TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            +          + LV E    G+L   L+R     +K  + + 
Sbjct: 75  DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWC 118

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.3 bits (208), Expect = 2e-21
 Identities = 15/85 (17%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGAC 62
          + +G+G FG+V + +     +    K ++ +  ++     E+  L+   H NI+ L+ + 
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70

Query: 63 -TGNPVCLVMEYAEGGSLYNELQRS 86
           +   + ++ E+  G  ++  +  S
Sbjct: 71 ESMEELVMIFEFISGLDIFERINTS 95

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.8 bits (204), Expect = 4e-21
 Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
             +G G +G V++G+W+  +  VAVK + E   E + F  E   +  + HPN+V+L G C
Sbjct: 23  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 82

Query: 63  T-GNPVCLVMEYAEGGSLYNELQRSSAASL 91
           T   P  ++ E+   G+L + L+  +   +
Sbjct: 83  TREPPFYIITEFMTYGNLLDYLRECNRQEV 112

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 6e-21
 Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 11/95 (11%)

Query: 5   SKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGA 61
           S+++G G  G V +   +   +  A+K ++   +      EV    R S  P+IV++   
Sbjct: 17  SQVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDV 73

Query: 62  C-----TGNPVCLVMEYAEGGSLYNELQRSSAASL 91
                     + +VME  +GG L++ +Q     + 
Sbjct: 74  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 108

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.6 bits (201), Expect = 8e-21
 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
           + +G+GA+G V   + +   + VAVK ++ +      +    E+     ++H N+VK YG
Sbjct: 11  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70

Query: 61  ACT-GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
               GN   L +EY  GG L++ ++          + + 
Sbjct: 71  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 109

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 1e-20
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 9/102 (8%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIE-----TEAERKAFAVEVRQLSRV-SHPNIVK 57
           K++G+G+FG V+   ++  NQ+ A+K ++      + + +   VE R LS    HP +  
Sbjct: 8   KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 67

Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           ++    T   +  VMEY  GG L   +Q      L     Y 
Sbjct: 68  MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 109

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.7 bits (201), Expect = 1e-20
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 9/85 (10%)

Query: 6   KIVGQGAFGVVWKGLW-----QNQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
           +++G G FG V  G       +  +VA+K ++   TE +R+ F  E   + +  HPN++ 
Sbjct: 32  QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 91

Query: 58  LYGAC-TGNPVCLVMEYAEGGSLYN 81
           L G      PV ++ E+ E GSL +
Sbjct: 92  LEGVVTKSTPVMIITEFMENGSLDS 116

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 1e-20
 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI--------ETEAERKAFAVEVRQLSRVSHPNI 55
           + +G G F VV K   +      A K I             R+    EV  L  + HPN+
Sbjct: 16  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75

Query: 56  VKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           + L+        V L++E   GG L++ L    + + +    +L
Sbjct: 76  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 119

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 81.7 bits (201), Expect = 2e-20
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI--------ETEAERKAFAVEVRQLSRVSHPNI 55
           +I+G+G FG V+        +  A+K +        + E       + +  +S    P I
Sbjct: 10  RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 69

Query: 56  VKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           V +  A  T + +  +++   GG L+  L +    S    + Y 
Sbjct: 70  VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYA 113

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.0 bits (199), Expect = 2e-20
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 10/87 (11%)

Query: 5   SKIVGQGAFGVVWKGLW-----QNQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIV 56
           ++++G+G FG V+ G       +  + AVK +       E   F  E   +   SHPN++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 57  KLYGAC--TGNPVCLVMEYAEGGSLYN 81
            L G C  +     +V+ Y + G L N
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRN 118

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 1e-19
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 8/101 (7%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           + +G+G FG V+    +     +A+K      +E          EV   S + HPNI++L
Sbjct: 12  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 71

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           YG       V L++EYA  G++Y ELQ+ S    +    Y+
Sbjct: 72  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 112

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 1e-19
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 6   KIVGQGAFGVVWKGLWQN----QYVAVKHI---ETEAERKAFAVEVRQLSRVS-HPNIVK 57
            ++G+G FG V K   +        A+K +    ++ + + FA E+  L ++  HPNI+ 
Sbjct: 16  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 75

Query: 58  LYGACT-GNPVCLVMEYAEGGSLYNELQRS 86
           L GAC     + L +EYA  G+L + L++S
Sbjct: 76  LLGACEHRGYLYLAIEYAPHGNLLDFLRKS 105

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 1e-19
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 11/107 (10%)

Query: 6   KIVGQGAFGVVWKGLWQ-------NQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNI 55
           + +GQG+FG+V++G+ +          VA+K +    +  ER  F  E   +   +  ++
Sbjct: 26  RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 85

Query: 56  VKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFW 101
           V+L G  + G P  ++ME    G L + L+    A      +  P  
Sbjct: 86  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 132

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 6e-19
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 10/103 (9%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI-------ETEAERKAFAVEVRQLSRVSHPNIV 56
             +G+G F  V+K   +  NQ VA+K I         +   +    E++ L  +SHPNI+
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 57  KLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            L  A    + + LV ++ E          S   +    K Y+
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYM 106

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.8 bits (188), Expect = 8e-19
 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 11/93 (11%)

Query: 6   KIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNI 55
           + +G+GAFG V++              VAVK ++ EA    +  F  E   ++   +PNI
Sbjct: 19  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 78

Query: 56  VKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSS 87
           VKL G C  G P+CL+ EY   G L   L+  S
Sbjct: 79  VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS 111

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 76.3 bits (187), Expect = 1e-18
 Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 15/108 (13%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI-----------ETEAERKAFAVEVRQLSRVS- 51
           +I+G+G   VV + + +   +  AVK I           E +  R+A   EV  L +VS 
Sbjct: 9   EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 68

Query: 52  HPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           HPNI++L     T     LV +  + G L++ L      S K  +  +
Sbjct: 69  HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 116

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 2e-18
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)

Query: 6  KIVGQGAFGVVWKGLWQNQ------YVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIV 56
          K++G GAFG V+KGLW  +       VA+K +    +    K    E   ++ V +P++ 
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74

Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
          +L G C  + V L+ +    G L +
Sbjct: 75 RLLGICLTSTVQLITQLMPFGCLLD 99

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 74.9 bits (183), Expect = 4e-18
 Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGAC 62
           + +G+G +  V++ +    N+ V VK ++   ++K    E++ L  +   PNI+ L    
Sbjct: 41  RKLGRGKYSEVFEAINITNNEKVVVKILKPV-KKKKIKREIKILENLRGGPNIITLADIV 99

Query: 63  ---TGNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
                    LV E+          Q  +   ++F
Sbjct: 100 KDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF 133

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 5e-18
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)

Query: 6  KIVGQGAFGVVWKGLWQN------QYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIV 56
          K++G G FG V+KG+ +         VA+K ++   TE +R  F  E   + + SH NI+
Sbjct: 13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 72

Query: 57 KLYGAC-TGNPVCLVMEYAEGGSLYN 81
          +L G      P+ ++ EY E G+L  
Sbjct: 73 RLEGVISKYKPMMIITEYMENGALDK 98

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.0 bits (181), Expect = 8e-18
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           + +G G+FG V     +   +Y A+K ++ E      + +    E   LS V+HP I+++
Sbjct: 10  RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 69

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
           +G       + ++M+Y EGG L++ L++S        K Y 
Sbjct: 70  WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYA 110

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 9e-18
 Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 11/90 (12%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
           K++G G+FGVV++       + VA+K +  +        E++ + ++ H NIV+L     
Sbjct: 26  KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--KNRELQIMRKLDHCNIVRLRYFFY 83

Query: 64  GNP-------VCLVMEYAEGGSLYNELQRS 86
            +        + LV++Y            S
Sbjct: 84  SSGEKKDEVYLNLVLDYVPETVYRVARHYS 113

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 2e-17
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 14/102 (13%)

Query: 6   KIVGQGAFGVVWKGLW---------QNQYVAVKHIE---TEAERKAFAVEVRQLSRVS-H 52
           K +G+GAFG V              +   VAVK ++   TE +      E+  +  +  H
Sbjct: 19  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78

Query: 53  PNIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
            NI+ L GAC    P+ +++EYA  G+L   LQ      L++
Sbjct: 79  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 120

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 2e-17
 Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 15/106 (14%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLY 59
           + VG GA+G V   +       VA+K +    ++E   K    E+R L  + H N++ L 
Sbjct: 24  QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 83

Query: 60  GACT-------GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
              T            LVM +   G+   +L +         +  +
Sbjct: 84  DVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLV 127

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.2 bits (176), Expect = 4e-17
 Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 4/97 (4%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC- 62
           + +G G+FG ++ G      + VA+K    + +     +E +    +     +     C 
Sbjct: 13  RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG 72

Query: 63  -TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
             G+   +VME             S   SLK   +  
Sbjct: 73  AEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLA 109

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 4e-17
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 8/101 (7%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
           K++G+G FG V     +   +Y A+K +  E      E      E R L    HP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70

Query: 59  YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
             A  T + +C VMEYA GG L+  L R    + +  + Y 
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 8e-17
 Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 10/90 (11%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI---ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
             +G+GA+G+V           VA+K I   E +   +    E++ L R  H NI+ +  
Sbjct: 14  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 73

Query: 61  ACTGNPV-----CLVMEYAEGGSLYNELQR 85
                 +       ++ +  G  LY  L+ 
Sbjct: 74  IIRAPTIEQMKDVYLVTHLMGADLYKLLKT 103

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 1e-16
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 13/94 (13%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--------AERKAFAVEVRQLSRVS--HP 53
            ++G G FG V+ G+    N  VA+KH+E +               +EV  L +VS    
Sbjct: 10  PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69

Query: 54  NIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
            +++L       +   L++E  E      +    
Sbjct: 70  GVIRLLDWFERPDSFVLILERPEPVQDLFDFITE 103

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (172), Expect = 2e-16
 Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 15/95 (15%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLY 59
             +GQG FG V+K   +   Q VA+K +    E E        E++ L  + H N+V L 
Sbjct: 16  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75

Query: 60  GAC---------TGNPVCLVMEYAEGGSLYNELQR 85
             C             + LV ++ E          
Sbjct: 76  EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV 110

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (170), Expect = 4e-16
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 13/101 (12%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLY 59
           K +G GA G+V        ++ VA+K +    + +   K    E+  +  V+H NI+ L 
Sbjct: 23  KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82

Query: 60  GACT-------GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
              T          V LVME  +               + +
Sbjct: 83  NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 123

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 68.8 bits (167), Expect = 6e-16
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 6/99 (6%)

Query: 6   KIVGQGAFGVVWKGLWQ-NQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
           + +G+G +GVV+K      +  A+K I    E E        E+  L  + H NIVKLY 
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67

Query: 61  AC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
              T   + LV E+ +                   K +L
Sbjct: 68  VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL 106

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (166), Expect = 1e-15
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 7/81 (8%)

Query: 6  KIVGQGAFGVVWKGLWQ--NQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLY 59
          + +G+G +GVV+K   +   + VA+K I    ETE        E+  L  ++HPNIVKL 
Sbjct: 8  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67

Query: 60 GAC-TGNPVCLVMEYAEGGSL 79
              T N + LV E+      
Sbjct: 68 DVIHTENKLYLVFEFLHQDLK 88

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 3e-15
 Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 13/84 (15%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLY 59
             VG GA+G V           VAVK +    ++    K    E+R L  + H N++ L 
Sbjct: 24  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83

Query: 60  GACT-------GNPVCLVMEYAEG 76
              T        N V LV      
Sbjct: 84  DVFTPARSLEEFNDVYLVTHLMGA 107

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 4e-15
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 13/93 (13%)

Query: 6   KIVGQGAFGVVWKGLWQ-------NQYVAVKHI---ETEAERKAFAVEVRQLSRVSH-PN 54
           K +G+GAFG V +            + VAVK +    T +E +A   E++ L  + H  N
Sbjct: 19  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 78

Query: 55  IVKLYGAC--TGNPVCLVMEYAEGGSLYNELQR 85
           +V L GAC   G P+ +++E+ + G+L   L+ 
Sbjct: 79  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 111

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (155), Expect = 3e-14
 Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 7/100 (7%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLY 59
           + +G+G +G V+K   +  ++ VA+K +    + E    +   E+  L  + H NIV+L+
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67

Query: 60  GAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
               +   + LV E+ +          +     +  K +L
Sbjct: 68  DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL 107

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 3e-14
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 13/106 (12%)

Query: 6   KIVGQGAFGVVWKGL-----WQNQYVAVKHI------ETEAERKAFAVEVRQLSRVSH-P 53
           K++G GA+G V+           +  A+K +      +     +    E + L  +   P
Sbjct: 30  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 89

Query: 54  NIVKLYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
            +V L+ A  T   + L+++Y  GG L+  L +    +    +IY+
Sbjct: 90  FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV 135

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 1e-13
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 16/98 (16%)

Query: 6   KIVGQGAFGVVWKG---LWQNQYVAVKHI----ETEAERKAFAVEV---RQLSRVSHPNI 55
             +G+GA+G V+K        ++VA+K +      E    +   EV   R L    HPN+
Sbjct: 13  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72

Query: 56  VKLYGACT------GNPVCLVMEYAEGGSLYNELQRSS 87
           V+L+  CT         + LV E+ +        +   
Sbjct: 73  VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE 110

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.5 bits (151), Expect = 2e-13
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 8/101 (7%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
           K +G G+FG V     +    + A+K      +    + +    E R L  V+ P +VKL
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106

Query: 59  YG-ACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
                  + + +VMEY  GG +++ L+R    S    + Y 
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 61.4 bits (148), Expect = 3e-13
 Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 4/102 (3%)

Query: 6   KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSH-PNIVKLYGAC 62
           + +G+G+FGV+++G     NQ VA+K     ++      E R    ++    I  +Y   
Sbjct: 11  RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFG 70

Query: 63  -TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFS 103
             G    LV++                 S+K   +      +
Sbjct: 71  QEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLA 112

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.1 bits (139), Expect = 6e-12
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 6  KIVGQGAFGVVWKG--LWQNQYVAVKHIE-TEAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
          + +G G F  VW    +  N +VA+K +   +   +A   E++ L RV+  +  K     
Sbjct: 19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 63 TGNPVCLVMEYAE 75
            + + L+  +  
Sbjct: 79 ANHILKLLDHFNH 91

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 44.0 bits (103), Expect = 3e-07
 Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 18/86 (20%)

Query: 6  KIVGQGAFGVVWKG-LWQNQYVAVKHIETEA------------ERKAFAVEVRQLSRVSH 52
          K++G+G    V+     +     VK  +                   F+V   + +R   
Sbjct: 6  KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 53 PNIVKLYGACTGNPV-----CLVMEY 73
            + KL G             ++ME 
Sbjct: 66 RALQKLQGLAVPKVYAWEGNAVLMEL 91

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	106
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.9
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.9
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.9
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.89
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.89
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.89
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.89
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.89
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.89
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.88
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.88
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.88
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.88
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.88
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.88
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.87
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.86
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.86
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.86
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.86
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.86
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.85
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.85
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.85
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.85
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.84
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.84
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.84
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.83
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.82
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.82
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.82
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.81
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.81
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.81
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.79
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.79
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.78
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.77
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.77
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.77
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.77
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.77
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.76
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.76
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.76
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.76
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.76
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.75
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.75
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.75
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.74
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.74
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.73
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.7
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.68
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.67
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.66
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.38
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.16
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	91.18
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	82.19

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-24  Score=128.31  Aligned_cols=104  Identities=23%  Similarity=0.377  Sum_probs=90.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |++.+.||+|+||.||++.++  +..+|+|.++..   ...+.+.+|+.++..++|||++++++.+ ..+..++||||++
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~   86 (271)
T d1nvra_           7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS   86 (271)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccC
Confidence            677899999999999999987  789999998633   2245688999999999999999999999 5578999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.+++..++.++++.++.++.|++.||
T Consensus        87 gg~L~~~l~~~~~l~e~~~~~i~~qi~~al  116 (271)
T d1nvra_          87 GGELFDRIEPDIGMPEPDAQRFFHQLMAGV  116 (271)
T ss_dssp             TEEGGGGSBTTTBCCHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            999999998888899999999999999886

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4e-24  Score=127.24  Aligned_cols=105  Identities=24%  Similarity=0.347  Sum_probs=92.8

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCH--------HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEE
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--------AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCL   69 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~l   69 (106)
                      .|.+.+.||+|+||.||++.++  +..+|+|.++..        ...+.+.+|+.++..++|||++++++++. .+..++
T Consensus        11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   90 (293)
T d1jksa_          11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL   90 (293)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            3778899999999999999987  789999988521        12567889999999999999999999994 578999


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||||+++|+|.+++...+.+++..++.++.|++.||
T Consensus        91 v~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al  126 (293)
T d1jksa_          91 ILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV  126 (293)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCccccchhccccccchhHHHHHHHHHHHHH
Confidence            999999999999999888899999999999999876

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1e-23  Score=126.92  Aligned_cols=104  Identities=15%  Similarity=0.265  Sum_probs=92.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      |.+.+.||+|+||.||++.+.  +..+|+|.++... ....+.+|+.++..++||||+++++++ ..+.+|+||||++||
T Consensus         7 Y~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg   86 (321)
T d1tkia_           7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL   86 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCC
Confidence            678899999999999999987  7889999997443 345678999999999999999999999 568899999999999


Q ss_pred             ChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++..++ .++++.++.++.|++.|+
T Consensus        87 ~L~~~i~~~~~~l~e~~~~~i~~qi~~al  115 (321)
T d1tkia_          87 DIFERINTSAFELNEREIVSYVHQVCEAL  115 (321)
T ss_dssp             BHHHHHTSSSCCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9999998765 689999999999999876

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.8e-24  Score=128.37  Aligned_cols=104  Identities=25%  Similarity=0.294  Sum_probs=92.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |++.+.||+|+||.||++.+.  +..+|+|.++.   ......+.+|+.++..++|||++++++.+ ..+++++||||++
T Consensus         8 y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~   87 (322)
T d1s9ja_           8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD   87 (322)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             CEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            677899999999999999987  78899998863   23456788999999999999999999999 4577999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+|.+++.+.+.+++..++.++.|++.||
T Consensus        88 gg~L~~~l~~~~~l~~~~~~~~~~qil~aL  117 (322)
T d1s9ja_          88 GGSLDQVLKKAGRIPEQILGKVSIAVIKGL  117 (322)
T ss_dssp             TEEHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999888899999999999999876

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=4.6e-24  Score=127.73  Aligned_cols=104  Identities=23%  Similarity=0.354  Sum_probs=89.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH---HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~   75 (106)
                      |++.+.||+|+||.||++.++  +..+|+|.++...   ....+.+|+.++..++|||++++++.+. .+.+++||||++
T Consensus        11 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~   90 (307)
T d1a06a_          11 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS   90 (307)
T ss_dssp             EEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             eEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence            778899999999999999987  7889999986432   2345778999999999999999999994 578999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+|.+++...+.+++..++.++.|++.||
T Consensus        91 gg~L~~~l~~~~~l~e~~~~~~~~qi~~al  120 (307)
T d1a06a_          91 GGELFDRIVEKGFYTERDASRLIFQVLDAV  120 (307)
T ss_dssp             SCBHHHHHHTCSCCCHHHHHHHHHHHHHHH
T ss_pred             CCcHHHhhhcccCCCHHHHHHHHHHHHHHH
Confidence            999999999888899999999999999886

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.1e-23  Score=123.76  Aligned_cols=104  Identities=28%  Similarity=0.402  Sum_probs=91.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.++  +..+|+|.+....     ....+.+|+.++..++|||++++++.+. .+..++||||
T Consensus         8 y~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy   87 (263)
T d2j4za1           8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY   87 (263)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEee
Confidence            667889999999999999987  7889999986322     2456788999999999999999999994 5789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|+|.+++...+.+++..++.++.|++.||
T Consensus        88 ~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al  119 (263)
T d2j4za1          88 APLGTVYRELQKLSKFDEQRTATYITELANAL  119 (263)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999888899999999999999886

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.89  E-value=5.2e-23  Score=125.03  Aligned_cols=104  Identities=23%  Similarity=0.376  Sum_probs=91.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |.+.+.||+|+||.||++.++  +..+|+|.+...  ...+.+.+|+.++..++|||++++++++ ..+..++||||++|
T Consensus        28 Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g  107 (350)
T d1koaa2          28 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG  107 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCC
Confidence            677899999999999999987  789999998643  3456788999999999999999999998 56889999999999


Q ss_pred             CChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++.. .+.+++..++.++.|++.||
T Consensus       108 g~L~~~l~~~~~~l~e~~~~~i~~qi~~aL  137 (350)
T d1koaa2         108 GELFEKVADEHNKMSEDEAVEYMRQVCKGL  137 (350)
T ss_dssp             CBHHHHHTCTTSCBCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            999999964 45689999999999999876

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.1e-23  Score=125.10  Aligned_cols=105  Identities=26%  Similarity=0.370  Sum_probs=91.3

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      +|++.+.||+|+||.||++.+.  +..+|+|.++..  ...+.+.+|+.++..++||||+++++++ ..+..++||||++
T Consensus        13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~   92 (288)
T d2jfla1          13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   92 (288)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence            3677899999999999999987  778999998632  3345688899999999999999999999 5688999999999


Q ss_pred             CCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|+|.+++.+ .+++++..++.++.|++.||
T Consensus        93 ~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL  123 (288)
T d2jfla1          93 GGAVDAVMLELERPLTESQIQVVCKQTLDAL  123 (288)
T ss_dssp             TEEHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            9999999865 45689999999999999876

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.4e-23  Score=124.66  Aligned_cols=104  Identities=23%  Similarity=0.301  Sum_probs=92.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |++.+.||+|+||.||++.+.  +..+|+|.++...     ....+.+|+.++..++|||++++++.+. .+..++||||
T Consensus        10 y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy   89 (288)
T d1uu3a_          10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY   89 (288)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECC
T ss_pred             CEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEc
Confidence            678899999999999999987  7899999986332     2356889999999999999999999994 5789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.+++...+.+++..++.++.|++.||
T Consensus        90 ~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al  121 (288)
T d1uu3a_          90 AKNGELLKYIRKIGSFDETCTRFYTAEIVSAL  121 (288)
T ss_dssp             CTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHhhhccCCCCHHHHHHHHHHHHHHH
Confidence            99999999999888899999999999999875

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.9e-23  Score=123.02  Aligned_cols=103  Identities=22%  Similarity=0.334  Sum_probs=90.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~   76 (106)
                      |...+.||+|+||.||++.+.  +..+|+|.++..  ...+.+.+|+.+++.++|||++++++.+ ..+.+++||||++|
T Consensus        22 Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~g  101 (293)
T d1yhwa1          22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  101 (293)
T ss_dssp             BCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             cEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCC
Confidence            888999999999999999876  889999998633  2346688999999999999999999999 56889999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++.++ .+++..++.++.|++.||
T Consensus       102 g~L~~~~~~~-~l~~~~~~~i~~qi~~aL  129 (293)
T d1yhwa1         102 GSLTDVVTET-CMDEGQIAAVCRECLQAL  129 (293)
T ss_dssp             CBHHHHHHHS-CCCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHhhcc-CCCHHHHHHHHHHHHHHH
Confidence            9999988764 588999999999999886

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.88  E-value=6.1e-23  Score=124.79  Aligned_cols=104  Identities=21%  Similarity=0.355  Sum_probs=91.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH--HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE--AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEG   76 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~   76 (106)
                      |++.+.||+|+||.||++.+.  +..+|+|.++..  .....+.+|+.++..++||||+++++++. .+.+++||||++|
T Consensus        31 Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g  110 (352)
T d1koba_          31 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG  110 (352)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCC
Confidence            678899999999999999986  789999998643  34556788999999999999999999994 5789999999999


Q ss_pred             CChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++.... .+++..++.++.|++.||
T Consensus       111 g~L~~~~~~~~~~l~e~~~~~i~~qi~~aL  140 (352)
T d1koba_         111 GELFDRIAAEDYKMSEAEVINYMRQACEGL  140 (352)
T ss_dssp             CBHHHHTTCTTCCBCHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            99999887654 689999999999999876

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.88  E-value=5.3e-23  Score=121.60  Aligned_cols=104  Identities=27%  Similarity=0.333  Sum_probs=91.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----------HHHHHHHHHHHHHhcCC-CCceeeeeeeEe-cCc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----------AERKAFAVEVRQLSRVS-HPNIVKLYGACT-GNP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----------~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~   66 (106)
                      |++.+.||+|+||.||++.+.  +..+|+|.++..           .....+.+|+.++..++ |||++++++++. .+.
T Consensus         5 y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~   84 (277)
T d1phka_           5 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF   84 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcc
Confidence            678899999999999999986  789999998531           12345788999999997 999999999994 578


Q ss_pred             eEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++|||+++|+|.++++.++.+++..++.++.|++.||
T Consensus        85 ~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al  123 (277)
T d1phka_          85 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI  123 (277)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             eEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            999999999999999999888899999999999999876

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=5e-23  Score=123.30  Aligned_cols=104  Identities=21%  Similarity=0.251  Sum_probs=91.0

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |+.++.||+|+||.||++.+.  +..+|+|.++..     ...+.+.+|+.++..++||||+++++++ ..+..+++|||
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   96 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence            677899999999999999887  788999988532     2345688999999999999999999999 56789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+|++..++..++.+++..++.++.|++.||
T Consensus        97 ~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL  128 (309)
T d1u5ra_          97 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL  128 (309)
T ss_dssp             CSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred             cCCCchHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            99999988887777899999999999999876

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.9e-23  Score=124.58  Aligned_cols=104  Identities=30%  Similarity=0.411  Sum_probs=92.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |.+++.||+|+||.||++.++  +..+|+|.++...     ....+.+|+.++..++|||++++++.+. .+..++||||
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey   86 (337)
T d1o6la_           7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY   86 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceec
Confidence            678899999999999999987  7899999986432     2456788999999999999999999994 5789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||+|.+++...+.++++.++.++.|++.||
T Consensus        87 ~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al  118 (337)
T d1o6la_          87 ANGGELFFHLSRERVFTEERARFYGAEIVSAL  118 (337)
T ss_dssp             CTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred             cCCCchhhhhhcccCCcHHHHHHHHHHHhhhh
Confidence            99999999999988899999999999999876

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.2e-22  Score=119.72  Aligned_cols=104  Identities=25%  Similarity=0.380  Sum_probs=88.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe---cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACT---GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~lv~e   72 (106)
                      |++.+.||+|+||.||++.++  +..+|+|.++.    ....+.+.+|+.++..++|||++++++.+.   .+.++++||
T Consensus         6 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmE   85 (269)
T d2java1           6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME   85 (269)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEE
T ss_pred             CEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEe
Confidence            678899999999999999987  78899999853    234566889999999999999999999883   356899999


Q ss_pred             ecCCCChHHHHhc----CCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQR----SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~----~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++.+    .+.++++.+..++.|++.||
T Consensus        86 y~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al  122 (269)
T d2java1          86 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL  122 (269)
T ss_dssp             CCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999864    34688999999999998875

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.3e-22  Score=119.54  Aligned_cols=103  Identities=27%  Similarity=0.391  Sum_probs=88.4

Q ss_pred             CCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-----cCceEEEE
Q psy9377           3 GGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-----GNPVCLVM   71 (106)
Q Consensus         3 ~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~lv~   71 (106)
                      +..+.||+|+||.||++.+.  +..+++|.+...    ...+.+.+|+.++..++|||++++++.+.     .+.++++|
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            34567999999999999987  678999988532    34567889999999999999999999882     24589999


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++|+|.+++.+...++++.++.++.|++.||
T Consensus        92 E~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl  125 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGL  125 (270)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             eCCCCCcHHHHHhccccccHHHHHHHHHHHHHHH
Confidence            9999999999999888899999999999999875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.2e-22  Score=118.21  Aligned_cols=100  Identities=32%  Similarity=0.410  Sum_probs=86.7

Q ss_pred             eeEeecCcceEEEEEEC----CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCC
Q psy9377           6 KIVGQGAFGVVWKGLWQ----NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGG   77 (106)
Q Consensus         6 ~~lg~g~~~~v~~~~~~----~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g   77 (106)
                      +.||+|+||.||++.++    +..+|+|.++..    ...+.+.+|+.++..++|||++++++++..+..++||||+++|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            46999999999999764    357999988532    2346788999999999999999999999777889999999999


Q ss_pred             ChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.++++....+++..+..++.|++.|+
T Consensus        93 ~L~~~l~~~~~l~~~~~~~i~~qi~~gl  120 (277)
T d1xbba_          93 PLNKYLQQNRHVKDKNIIELVHQVSMGM  120 (277)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence            9999999888899999999999998875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=5.3e-22  Score=117.18  Aligned_cols=104  Identities=21%  Similarity=0.218  Sum_probs=90.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC-----HHHHHHHHHHHHHHhcCCCCceeeeeeeEe-c----CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET-----EAERKAFAVEVRQLSRVSHPNIVKLYGACT-G----NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~----~~~~l   69 (106)
                      |.+.+.||+|+||.||++.+.  +..+|+|.++.     ......+.+|+.++..++|||++++++.+. .    ...++
T Consensus         9 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~l   88 (277)
T d1o6ya_           9 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI   88 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             eEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEE
Confidence            778899999999999999986  88999999853     233457889999999999999999999883 2    23899


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ||||++||+|.+++...+.+++..+..++.|++.||
T Consensus        89 vmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al  124 (277)
T d1o6ya_          89 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL  124 (277)
T ss_dssp             EEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHH
Confidence            999999999999999888899999999999999876

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=4.4e-22  Score=119.51  Aligned_cols=104  Identities=26%  Similarity=0.403  Sum_probs=91.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.++  +..+|+|.++...     ..+.+.+|+.++..++|||++++++.+ ..+..++||||
T Consensus         6 y~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~   85 (316)
T d1fota_           6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY   85 (316)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeee
Confidence            677899999999999999987  7899999986332     245688999999999999999999999 45789999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||++..++......++..++.++.|++.|+
T Consensus        86 ~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al  117 (316)
T d1fota_          86 IEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL  117 (316)
T ss_dssp             CCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHH
T ss_pred             cCCccccccccccccccccHHHHHHHHHHHhh
Confidence            99999999999888888999999999998875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.2e-22  Score=119.29  Aligned_cols=104  Identities=27%  Similarity=0.366  Sum_probs=88.3

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe--cCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT--GNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~lv~e~~~~g~l   79 (106)
                      |+..+.||+|+||.||++.+++..+|+|.++.....+.+.+|+.++..++|||++++++.+.  .+..++||||+++|+|
T Consensus         9 ~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L   88 (262)
T d1byga_           9 LKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL   88 (262)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred             eEEeEEEecCCCeEEEEEEECCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCH
Confidence            45678899999999999999999999999976666678899999999999999999999883  3668999999999999


Q ss_pred             HHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .+++..+.  .++.+....++.|++.|+
T Consensus        89 ~~~l~~~~~~~l~~~~~~~i~~~i~~al  116 (262)
T d1byga_          89 VDYLRSRGRSVLGGDCLLKFSLDVCEAM  116 (262)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHhhc
Confidence            99997543  477888889999998875

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.7e-22  Score=115.82  Aligned_cols=104  Identities=30%  Similarity=0.509  Sum_probs=88.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |+..+.||+|+||.||++.+. +..+|+|.++.. ...+.+.+|+.++..++|||++++++++ ..+..++||||+++|+
T Consensus         7 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~   86 (263)
T d1sm2a_           7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC   86 (263)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             cEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCc
Confidence            566789999999999999987 678999998643 2356789999999999999999999999 4578999999999999


Q ss_pred             hHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |.+++... ..++.+....++.|++.|+
T Consensus        87 L~~~l~~~~~~~~~~~~~~i~~qia~gl  114 (263)
T d1sm2a_          87 LSDYLRTQRGLFAAETLLGMCLDVCEGM  114 (263)
T ss_dssp             HHHHHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhhccccCCCHHHHHHHHHHHHHHH
Confidence            99998764 4567777888999998775

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.3e-22  Score=119.00  Aligned_cols=104  Identities=26%  Similarity=0.431  Sum_probs=88.3

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHh-cCCCCceeeeeeeEe-cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLS-RVSHPNIVKLYGACT-GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~-~~~~~~i~~~~~~~~-~~~~~lv~e   72 (106)
                      |.+.+.||+|+||.||++.+.  +..+|+|.++...     .......|..++. .++|||++++++++. .+..++|||
T Consensus         4 y~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmE   83 (320)
T d1xjda_           4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   83 (320)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEe
Confidence            677899999999999999987  7899999986322     2234556666554 689999999999994 578999999


Q ss_pred             ecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++.....++++.++.++.|++.||
T Consensus        84 y~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al  116 (320)
T d1xjda_          84 YLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL  116 (320)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             ecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            999999999999888899999999999999876

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.1e-21  Score=115.80  Aligned_cols=103  Identities=28%  Similarity=0.416  Sum_probs=88.8

Q ss_pred             CCCceeEeecCcceEEEEEECCceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQNQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g   77 (106)
                      |.+.+.||+|+||.||++.+++ .+|+|.++.    ....+.+.+|+.++..++|||++++++++..+..+++|||+++|
T Consensus        10 ~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey~~~g   88 (276)
T d1uwha_          10 ITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGS   88 (276)
T ss_dssp             CCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCEE
T ss_pred             EEEEEEEeeCCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEecCCCC
Confidence            6788999999999999997654 599998852    23456788999999999999999999988778899999999999


Q ss_pred             ChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +|.+++... ..++...+..++.|++.|+
T Consensus        89 ~L~~~l~~~~~~~~~~~~~~i~~qi~~gl  117 (276)
T d1uwha_          89 SLYHHLHIIETKFEMIKLIDIARQTAQGM  117 (276)
T ss_dssp             EHHHHHHTSCCCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            999999764 4688888899999998875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.2e-21  Score=114.33  Aligned_cols=99  Identities=27%  Similarity=0.423  Sum_probs=85.3

Q ss_pred             eEeecCcceEEEEEEC----CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           7 IVGQGAFGVVWKGLWQ----NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         7 ~lg~g~~~~v~~~~~~----~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      .||+|+||.||++.++    +..+|+|.++.   ....+.+.+|+.++..++|||++++++++..+..++||||+++|+|
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvmE~~~~g~L   95 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL   95 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEH
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEEEeCCCCcH
Confidence            4999999999999775    34689999863   3345678999999999999999999999987889999999999999


Q ss_pred             HHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          80 YNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++.. +..+++..+..++.|++.||
T Consensus        96 ~~~l~~~~~~l~~~~~~~i~~qi~~gL  122 (285)
T d1u59a_          96 HKFLVGKREEIPVSNVAELLHQVSMGM  122 (285)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHhhccccCCCHHHHHHHHHHHHHHH
Confidence            999865 45688899999999998875

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=4.3e-22  Score=118.21  Aligned_cols=104  Identities=27%  Similarity=0.494  Sum_probs=88.5

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~~~~g   77 (106)
                      |+..+.||+|+||.||++.+.  +..+|+|.++.. ...+.+.+|+.++..++||||+++++.+. .+..+++|||+++|
T Consensus        19 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g   98 (287)
T d1opja_          19 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG   98 (287)
T ss_dssp             EEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             eEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCc
Confidence            345688999999999999987  778999998633 23567889999999999999999999994 57899999999999


Q ss_pred             ChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      ++.+++...  ..+++..+..++.|++.||
T Consensus        99 ~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL  128 (287)
T d1opja_          99 NLLDYLRECNRQEVSAVVLLYMATQISSAM  128 (287)
T ss_dssp             BHHHHHHHSCTTTSCHHHHHHHHHHHHHHH
T ss_pred             chHHHhhhccccchHHHHHHHHHHHHHHHH
Confidence            999999764  4577788888999998875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.5e-21  Score=114.36  Aligned_cols=104  Identities=29%  Similarity=0.439  Sum_probs=89.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecCCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAEGGS   78 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~~g~   78 (106)
                      |+..+.||+|+||.||++.++ +..+|+|.++.. .....+.+|+.++..++|||++++++++ .++..++||||+++|+
T Consensus         6 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~   85 (258)
T d1k2pa_           6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC   85 (258)
T ss_dssp             CCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEE
T ss_pred             CEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCc
Confidence            788899999999999999988 668999998643 3456789999999999999999999999 4578999999999999


Q ss_pred             hHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          79 LYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        79 l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+++... ..+++.....++.|++.|+
T Consensus        86 l~~~~~~~~~~~~~~~~~~i~~qi~~gl  113 (258)
T d1k2pa_          86 LLNYLREMRHRFQTQQLLEMCKDVCEAM  113 (258)
T ss_dssp             HHHHHHSGGGCCCHHHHHHHHHHHHHHH
T ss_pred             HHHhhhccccCCcHHHHHHHHHHHHHHH
Confidence            99997654 4577788888999998875

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.4e-22  Score=116.65  Aligned_cols=104  Identities=28%  Similarity=0.459  Sum_probs=88.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      |++.+.||+|+||.||++.++ +..+|+|.++.. ...+.+.+|+.++..++|||++++++.+..+..++||||+++|+|
T Consensus        15 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~g~L   94 (272)
T d1qpca_          15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSL   94 (272)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBH
T ss_pred             eEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCCCCcH
Confidence            456788999999999999988 678999998643 235678999999999999999999998877888999999999999


Q ss_pred             HHHHhcCC--CCchhhhhhhhhccccCC
Q psy9377          80 YNELQRSS--AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~~~--~~~~~~~~~~~~qll~~~  105 (106)
                      .+++....  .++...+..++.|++.|+
T Consensus        95 ~~~~~~~~~~~l~~~~~~~i~~qi~~gl  122 (272)
T d1qpca_          95 VDFLKTPSGIKLTINKLLDMAAQIAEGM  122 (272)
T ss_dssp             HHHTTSHHHHTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHHHHH
Confidence            99886543  477888889999988765

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=1.9e-21  Score=118.08  Aligned_cols=104  Identities=25%  Similarity=0.342  Sum_probs=91.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-----HHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      |++++.||+|+||.||++.++  +..+|+|.++...     ..+.+.+|+.++..++|||++++++.+. .+..+++||+
T Consensus        43 y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~  122 (350)
T d1rdqe_          43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY  122 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccccc
Confidence            677899999999999999987  8899999986332     2356789999999999999999999994 5778999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.+|++.+++...+.+++..++.++.|++.||
T Consensus       123 ~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL  154 (350)
T d1rdqe_         123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF  154 (350)
T ss_dssp             CTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ccccchhhhHhhcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999888899999999999999876

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.84  E-value=3.8e-21  Score=117.31  Aligned_cols=104  Identities=19%  Similarity=0.233  Sum_probs=86.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHH-----HHHHHH---HHHHHhcCCCCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE-----RKAFAV---EVRQLSRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~-----~~~~~~---~~~~~~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |.+.+.||+|+||.||++.+.  +..+|+|.++....     ...+.+   ++.++..+.|||++++++++ ..+..++|
T Consensus         6 y~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~iv   85 (364)
T d1omwa3           6 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI   85 (364)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             CeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEE
Confidence            678899999999999999987  78999999863211     122333   45667778899999999999 45789999


Q ss_pred             EeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |||++||+|.+++.+...+++..++.++.|++.||
T Consensus        86 mE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL  120 (364)
T d1omwa3          86 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL  120 (364)
T ss_dssp             ECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             EEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHH
Confidence            99999999999999888889999999999999876

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=5.3e-21  Score=114.02  Aligned_cols=104  Identities=26%  Similarity=0.448  Sum_probs=86.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--C---ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N---QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~---~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |+..+.||+|+||.||++.++  +   ..+++|.+..   ....+.+.+|+.++..++||||+++++++ .++..+++||
T Consensus        28 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~E  107 (299)
T d1jpaa_          28 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITE  107 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence            345688999999999999875  2   2578887753   33456789999999999999999999999 4578999999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.+++... +.+++..+..++.|++.||
T Consensus       108 y~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl  141 (299)
T d1jpaa_         108 FMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGM  141 (299)
T ss_dssp             CCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred             ecCCCcceeeeccccCCCCHHHHHHHHHHHHHHH
Confidence            99999999988874 4578888889999998875

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.5e-21  Score=114.70  Aligned_cols=102  Identities=25%  Similarity=0.341  Sum_probs=85.5

Q ss_pred             CceeEeecCcceEEEEEEC--CceEEEEEecCHH-------HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEee
Q psy9377           4 GSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-------ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEY   73 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~   73 (106)
                      .++.||+|+||.||++.++  +..+|+|.++...       ....+.+|+.++..++|||++++++++ ..++.++||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            4689999999999999886  7899999986321       123578899999999999999999999 55889999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.++++..+......+++..++.++.|++.||
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL  113 (299)
T d1ua2a_          82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGL  113 (299)
T ss_dssp             CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHH
T ss_pred             hcchHHhhhhhcccCCCHHHHHHHHHHHHHHH
Confidence            99988777776677799999999999999876

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.9e-20  Score=109.52  Aligned_cols=104  Identities=30%  Similarity=0.441  Sum_probs=87.6

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEY   73 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~   73 (106)
                      |.+.+.||+|+||.||++.+.     +..+++|.++.   ......+.+|+.++..++|||++++++++..+..+++|||
T Consensus         9 ~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~E~   88 (273)
T d1mp8a_           9 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMEL   88 (273)
T ss_dssp             EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             eEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEEEe
Confidence            566789999999999999875     24578887753   2345678899999999999999999999987889999999


Q ss_pred             cCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|++.+++... ..+++..+..++.|++.|+
T Consensus        89 ~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl  121 (273)
T d1mp8a_          89 CTLGELRSFLQVRKYSLDLASLILYAYQLSTAL  121 (273)
T ss_dssp             CTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHH
T ss_pred             ccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHh
Confidence            9999999987654 4678888999999998875

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.7e-20  Score=111.21  Aligned_cols=104  Identities=29%  Similarity=0.468  Sum_probs=88.9

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH-HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEeecCCCCh
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE-AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSL   79 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e~~~~g~l   79 (106)
                      |++.+.||+|+||.||++.++ +..+|+|.++.. ...+.+.+|+.++..++|+||+++++.+..+..++||||+++|++
T Consensus        19 ~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~g~l   98 (285)
T d1fmka3          19 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSL   98 (285)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTCBH
T ss_pred             EEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecCCCch
Confidence            456789999999999999988 567999998633 234678999999999999999999999977789999999999999


Q ss_pred             HHHHhc--CCCCchhhhhhhhhccccCC
Q psy9377          80 YNELQR--SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        80 ~~~l~~--~~~~~~~~~~~~~~qll~~~  105 (106)
                      ..++..  .+.++......++.|++.|+
T Consensus        99 ~~~~~~~~~~~l~~~~~~~i~~~i~~gl  126 (285)
T d1fmka3          99 LDFLKGETGKYLRLPQLVDMAAQIASGM  126 (285)
T ss_dssp             HHHHSHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhcccccchHHHHHHHHHHHHHHH
Confidence            988865  34588888899999988775

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.82  E-value=9.8e-21  Score=112.09  Aligned_cols=104  Identities=25%  Similarity=0.284  Sum_probs=90.3

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~~   75 (106)
                      |.+.+.||+|+||.||++.++ +..+|+|.++..    .....+.+|+.++..++|||++++++.+ ..+..+++++++.
T Consensus         4 Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~   83 (286)
T d1ob3a_           4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD   83 (286)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             ceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeeh
Confidence            778899999999999999988 789999998632    1245788999999999999999999999 4578999999998


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++.+..+.+..+.+++..++.++.|++.||
T Consensus        84 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L  113 (286)
T d1ob3a_          84 QDLKKLLDVCEGGLESVTAKSFLLQLLNGI  113 (286)
T ss_dssp             EEHHHHHHTSTTCCCHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHhhcCCcchhhhHHHHHHHHHHH
Confidence            877777777777899999999999999875

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.4e-20  Score=113.74  Aligned_cols=101  Identities=19%  Similarity=0.207  Sum_probs=83.3

Q ss_pred             CCCce-eEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHh-cCCCCceeeeeeeEe-----cCceEEEEe
Q psy9377           2 LGGSK-IVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLS-RVSHPNIVKLYGACT-----GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~-~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~-----~~~~~lv~e   72 (106)
                      |.+.. .||+|+||.||++.+.  +..+|+|.++..   ....+|+.++. ..+|||++++++++.     ...++++||
T Consensus        13 y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~---~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmE   89 (335)
T d2ozaa1          13 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   89 (335)
T ss_dssp             EEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             EEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc---HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEE
Confidence            55554 5999999999999986  789999998643   23556887755 458999999999883     256899999


Q ss_pred             ecCCCChHHHHhcC--CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS--SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~--~~~~~~~~~~~~~qll~~~  105 (106)
                      |++||+|.+++...  ..+++..++.++.|++.|+
T Consensus        90 y~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al  124 (335)
T d2ozaa1          90 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI  124 (335)
T ss_dssp             CCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHH
Confidence            99999999999864  3688999999999999886

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.4e-20  Score=111.02  Aligned_cols=103  Identities=28%  Similarity=0.416  Sum_probs=85.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH----HHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEEeec
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVMEYA   74 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~e~~   74 (106)
                      |++.+.||+|+||.||++.+.  +..+|+|.++...    ....+.+|+.+++.++|||++++++.+ ..+..+++|||+
T Consensus         4 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~   83 (298)
T d1gz8a_           4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL   83 (298)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             CEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeec
Confidence            778899999999999999987  7899999986332    245688999999999999999999999 557899999999


Q ss_pred             CCCChHHHHhc--CCCCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQR--SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~--~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+ ++.+++..  ...+++..++.++.|++.||
T Consensus        84 ~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L  115 (298)
T d1gz8a_          84 HQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL  115 (298)
T ss_dssp             SE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred             CC-chhhhhhhhcccCCCHHHHHHHHHHHHHHH
Confidence            76 45555533  34688999999999999876

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=5e-20  Score=109.09  Aligned_cols=105  Identities=19%  Similarity=0.253  Sum_probs=91.9

Q ss_pred             CCCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEEEee
Q psy9377           1 MLGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLVMEY   73 (106)
Q Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv~e~   73 (106)
                      .|++++.||+|+||.||++.+.  +..+|+|.++..    .....+.+|+.+++.++|+|++++.+.+. ....++++++
T Consensus         3 ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~   82 (292)
T d1unla_           3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeee
Confidence            3778899999999999999987  778999998522    34567889999999999999999999994 5778999999


Q ss_pred             cCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          74 AEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        74 ~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +.++++..+++..+.+++..++.++.|++.||
T Consensus        83 ~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL  114 (292)
T d1unla_          83 CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGL  114 (292)
T ss_dssp             CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccchhHHHHHHHHHHHHH
Confidence            99999998888888899999999999999875

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=7.1e-20  Score=109.49  Aligned_cols=104  Identities=29%  Similarity=0.458  Sum_probs=83.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--Cc--eEEEEEecC---HHHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQ--YVAVKHIET---EAERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~--~~~~k~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~lv~e   72 (106)
                      |+..+.||+|+||.||++.++  +.  .+++|.++.   ....+.+.+|+.++..+ +||||+++++.+ ..+..++|||
T Consensus        12 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~e   91 (309)
T d1fvra_          12 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE   91 (309)
T ss_dssp             CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEE
Confidence            556789999999999999876  33  467777642   22345788999999998 699999999999 5578999999


Q ss_pred             ecCCCChHHHHhcC----------------CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS----------------SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~qll~~~  105 (106)
                      |+++|+|.++++..                ..++......++.|++.|+
T Consensus        92 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl  140 (309)
T d1fvra_          92 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM  140 (309)
T ss_dssp             CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHH
T ss_pred             ecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHH
Confidence            99999999999754                3567777888888887765

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.2e-19  Score=109.14  Aligned_cols=104  Identities=32%  Similarity=0.462  Sum_probs=82.4

Q ss_pred             CCCceeEeecCcceEEEEEECC-------ceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeE-ecCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN-------QYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGAC-TGNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~-------~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~l   69 (106)
                      |.+.+.||+|+||.||++.+.+       ..+++|.+...   .....+.+|+.++..+ +||||+++++.+ ..+..++
T Consensus        39 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l  118 (325)
T d1rjba_          39 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL  118 (325)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             eEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEE
Confidence            4456889999999999998751       25888887533   2345678899998887 899999999999 4578999


Q ss_pred             EEeecCCCChHHHHhcCC-----------------------CCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSS-----------------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~-----------------------~~~~~~~~~~~~qll~~~  105 (106)
                      ||||+++|+|.++++...                       .++...+..++.|++.|+
T Consensus       119 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl  177 (325)
T d1rjba_         119 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGM  177 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHH
Confidence            999999999999997642                       356677888889988775

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.3e-19  Score=106.90  Aligned_cols=104  Identities=24%  Similarity=0.422  Sum_probs=87.4

Q ss_pred             CCCceeEeecCcceEEEEEEC--C----ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--N----QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~----~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~e   72 (106)
                      |+.++.||+|+||.||++.+.  +    ..+++|.++..   ...+.+.+|+.++..++|||++++++++..+..+++++
T Consensus        11 y~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v~e   90 (317)
T d1xkka_          11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ   90 (317)
T ss_dssp             EEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEE
T ss_pred             CEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEEEE
Confidence            678899999999999999876  3    25888887532   23567899999999999999999999998888899999


Q ss_pred             ecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ++.+|+|.+++... ..+++..+..++.|++.|+
T Consensus        91 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl  124 (317)
T d1xkka_          91 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM  124 (317)
T ss_dssp             CCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHH
T ss_pred             eccCCcccccccccccCCCHHHHHHHHHHHHHHH
Confidence            99999999888764 4688888899999998875

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.78  E-value=1.7e-19  Score=108.47  Aligned_cols=100  Identities=18%  Similarity=0.252  Sum_probs=85.1

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCC-CCceeeeeeeEe---cCceEEEEeecC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVS-HPNIVKLYGACT---GNPVCLVMEYAE   75 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~---~~~~~lv~e~~~   75 (106)
                      |++++.||+|+||.||++.+.  +..+|+|.++.. ..+.+.+|+.++..++ |||++++.+.+.   ....+++|||+.
T Consensus        37 y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~  115 (328)
T d3bqca1          37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN  115 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCC
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecC
Confidence            677899999999999999987  789999998643 3456788999999985 999999999984   256999999999


Q ss_pred             CCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          76 GGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        76 ~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++|..+.   +.+++..++.++.|++.||
T Consensus       116 ~~~L~~~~---~~l~e~~i~~i~~qil~aL  142 (328)
T d3bqca1         116 NTDFKQLY---QTLTDYDIRFYMYEILKAL  142 (328)
T ss_dssp             SCBGGGTT---TSCCHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence            99987664   3588999999999999886

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.77  E-value=1.5e-18  Score=103.34  Aligned_cols=104  Identities=31%  Similarity=0.448  Sum_probs=84.5

Q ss_pred             CCCceeEeecCcceEEEEEECC-------ceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN-------QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~-------~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv   70 (106)
                      |...+.||+|+||.||++++++       ..+|+|.++..   .....+.+|+.++..++|||++++.+.+ ..+..+++
T Consensus        15 ~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v   94 (301)
T d1lufa_          15 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLL   94 (301)
T ss_dssp             CEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             cEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEE
Confidence            5678899999999999998752       57999998632   3456789999999999999999999998 45789999


Q ss_pred             EeecCCCChHHHHhcCC------------------------CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS------------------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~------------------------~~~~~~~~~~~~qll~~~  105 (106)
                      +|++++|+|.+++....                        .++...+..++.|++.|+
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl  153 (301)
T d1lufa_          95 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGM  153 (301)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHH
T ss_pred             EEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHh
Confidence            99999999999997532                        245556677777777654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.3e-19  Score=106.78  Aligned_cols=104  Identities=30%  Similarity=0.450  Sum_probs=81.1

Q ss_pred             CCCceeEeecCcceEEEEEEC---C--ceEEEEEecCH-----HHHHHHHHHHHHHhcCCCCceeeeeeeEecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---N--QYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~--~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~lv~   71 (106)
                      |++.+.||+|+||.||++.+.   +  ..+|+|.+...     ...+.+.+|+.++..++|||++++++++..+..+++|
T Consensus        10 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~lv~   89 (273)
T d1u46a_          10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT   89 (273)
T ss_dssp             EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEE
T ss_pred             eEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchheee
Confidence            667889999999999999764   2  36888877532     2346788999999999999999999999777789999


Q ss_pred             eecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+++|++.+++... +.++...+..++.|+..|+
T Consensus        90 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl  124 (273)
T d1u46a_          90 ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM  124 (273)
T ss_dssp             ECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHH
T ss_pred             eeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHH
Confidence            999999999888654 4688889899999998775

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=9.5e-19  Score=103.46  Aligned_cols=104  Identities=29%  Similarity=0.421  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEECC------ceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeE-ecCceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQN------QYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGAC-TGNPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~------~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~lv~   71 (106)
                      |+..+.||+|+||.||++.+++      ..+++|.++.   ......+.+|+.++..++|||++++++++ ..+..+++|
T Consensus         9 ~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~   88 (283)
T d1mqba_           9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT   88 (283)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             eEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEE
Confidence            4567889999999999998752      3689998853   23345688999999999999999999999 457899999


Q ss_pred             eecCCCChHHHHhcC-CCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRS-SAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~-~~~~~~~~~~~~~qll~~~  105 (106)
                      ||+.+|++.+.+... ..++......++.|+..|+
T Consensus        89 e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl  123 (283)
T d1mqba_          89 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM  123 (283)
T ss_dssp             ECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHH
T ss_pred             EecccCcchhhhhcccccccHHHHHHHHHHHHHhh
Confidence            999999999888754 4678888888999987764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=4.9e-19  Score=105.92  Aligned_cols=104  Identities=37%  Similarity=0.451  Sum_probs=84.9

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~l   69 (106)
                      |++.+.||+|+||.||++.+.       +..+|+|.++..   .....+.+|+.++..+ +||||+++++.+. .+..++
T Consensus        25 ~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~l  104 (311)
T d1t46a_          25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV  104 (311)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             eEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEE
Confidence            345789999999999999863       357999998632   3455688899999888 6999999999994 577999


Q ss_pred             EEeecCCCChHHHHhcCC------------------CCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSS------------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~------------------~~~~~~~~~~~~qll~~~  105 (106)
                      +|||+++|+|.++++...                  .+++..+..++.|++.|+
T Consensus       105 vmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl  158 (311)
T d1t46a_         105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM  158 (311)
T ss_dssp             EEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHH
Confidence            999999999999997543                  466778888899988765

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.8e-19  Score=108.16  Aligned_cols=103  Identities=20%  Similarity=0.205  Sum_probs=85.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEec------CceEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACTG------NPVCL   69 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~l   69 (106)
                      |++.+.||+|+||.||+|.+.  +..+|+|.++..    .....+.+|+.++..++|+|++++.+++..      ...++
T Consensus        20 Y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~   99 (348)
T d2gfsa1          20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY   99 (348)
T ss_dssp             EEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCE
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEE
Confidence            678899999999999999986  889999998632    344568899999999999999999998831      23455


Q ss_pred             EEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          70 VMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        70 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++++.+|+|.+++..+ .+++..++.++.|++.||
T Consensus       100 i~~~~~gg~L~~~~~~~-~l~e~~~~~i~~qil~aL  134 (348)
T d2gfsa1         100 LVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGL  134 (348)
T ss_dssp             EEEECCSEEHHHHHTTC-CCCHHHHHHHHHHHHHHH
T ss_pred             EEEeecCCchhhhcccc-cccHHHHHHHHHHHHHHH
Confidence            66777899999999754 589999999999999886

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.7e-18  Score=102.13  Aligned_cols=101  Identities=25%  Similarity=0.389  Sum_probs=82.3

Q ss_pred             ceeEeecCcceEEEEEECC-----ceEEEEEec---CHHHHHHHHHHHHHHhcCCCCceeeeeeeE-e-cCceEEEEeec
Q psy9377           5 SKIVGQGAFGVVWKGLWQN-----QYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVKLYGAC-T-GNPVCLVMEYA   74 (106)
Q Consensus         5 ~~~lg~g~~~~v~~~~~~~-----~~~~~k~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~lv~e~~   74 (106)
                      .+.||+|+||.||++.+..     ..+++|.++   .......+.+|+.++.+++|||++++++.+ . .+..++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            4579999999999998751     257889885   234457799999999999999999999987 3 35789999999


Q ss_pred             CCCChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          75 EGGSLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        75 ~~g~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      ++|++.+++.... ..+......++.|++.|+
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL  143 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM  143 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHH
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhh
Confidence            9999999988654 455667778888888765

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=8.7e-19  Score=106.08  Aligned_cols=103  Identities=20%  Similarity=0.245  Sum_probs=81.7

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC---HHHHHHHHHHHHHHhcCCCCceeeeeeeEec-----CceEEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGACTG-----NPVCLVM   71 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~lv~   71 (106)
                      |.+++.||+|+||.||+|.+.  +..+|+|.++.   ......+.+|+.++..++|||++++++.+..     ...++++
T Consensus        10 Y~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~   89 (345)
T d1pmea_          10 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV   89 (345)
T ss_dssp             EEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred             eEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEE
Confidence            677899999999999999987  88999999863   2345678899999999999999999998832     1233444


Q ss_pred             eecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          72 EYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        72 e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++.+|+|.+++... ++++..++.++.|++.||
T Consensus        90 ~~~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al  122 (345)
T d1pmea_          90 THLMGADLYKLLKTQ-HLSNDHICYFLYQILRGL  122 (345)
T ss_dssp             EECCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHH
T ss_pred             EeecCCchhhhhhcC-CCCHHHHHHHHHHHHHHH
Confidence            556689999999765 588999999999999886

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=7.2e-19  Score=106.39  Aligned_cols=102  Identities=23%  Similarity=0.256  Sum_probs=79.9

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecC----HHHHHHHHHHHHHHhcCCCCceeeeeeeEec-------CceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIET----EAERKAFAVEVRQLSRVSHPNIVKLYGACTG-------NPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~   68 (106)
                      |++.+.||+|+||.||++.+.  +..+|+|.++.    ....+.+.+|+.++..++|||++++++++..       .+.+
T Consensus        20 Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~   99 (346)
T d1cm8a_          20 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY   99 (346)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEE
Confidence            677889999999999999987  78899999863    2345678899999999999999999999832       2579


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+ +.++..+.+. ..+++..++.++.|++.||
T Consensus       100 lv~e~~-~~~l~~~~~~-~~l~~~~~~~~~~qi~~aL  134 (346)
T d1cm8a_         100 LVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGL  134 (346)
T ss_dssp             EEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHH
T ss_pred             EEEecc-cccHHHHHHh-ccccHHHHHHHHHHHHHHH
Confidence            999999 5577777654 4689999999999999886

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4.2e-19  Score=107.80  Aligned_cols=101  Identities=25%  Similarity=0.260  Sum_probs=81.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe-------cCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT-------GNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~   68 (106)
                      |++++.||+|+||.||++.+.  +..+|+|.++..    .....+.+|+.++..++|||++++++++.       .+++|
T Consensus        19 Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~   98 (355)
T d2b1pa1          19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY   98 (355)
T ss_dssp             EEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred             eEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeE
Confidence            667889999999999999987  889999998632    33456889999999999999999999983       25689


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+.++ +.+.+.  ..++++.++.++.|++.|+
T Consensus        99 iv~Ey~~~~-l~~~~~--~~~~~~~i~~~~~qil~gl  132 (355)
T d2b1pa1          99 LVMELMDAN-LCQVIQ--MELDHERMSYLLYQMLCGI  132 (355)
T ss_dssp             EEEECCSEE-HHHHHT--SCCCHHHHHHHHHHHHHHH
T ss_pred             EEEeccchH-HHHhhh--cCCCHHHHHHHHHHHHHHH
Confidence            999999765 555554  3578899999999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=9e-20  Score=107.43  Aligned_cols=104  Identities=22%  Similarity=0.388  Sum_probs=86.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH--------HHHHHHHHHHHHhcCC--CCceeeeeeeE-ecCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA--------ERKAFAVEVRQLSRVS--HPNIVKLYGAC-TGNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--------~~~~~~~~~~~~~~~~--~~~i~~~~~~~-~~~~~~   68 (106)
                      |.+.+.||+|+||.||++.+.  +..+|+|.++...        ....+.+|+.++..++  |||++++++++ .++..+
T Consensus         6 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~   85 (273)
T d1xwsa_           6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV   85 (273)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEE
T ss_pred             EEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEE
Confidence            678899999999999999987  7899999885321        1123557888888875  89999999999 457899


Q ss_pred             EEEeecCC-CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEG-GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~-g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++||++.+ +++.+++..+..++++.++.++.|++.||
T Consensus        86 lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al  123 (273)
T d1xwsa_          86 LILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV  123 (273)
T ss_dssp             EEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             EEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence            99999976 68888998888899999999999999876

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.7e-18  Score=103.22  Aligned_cols=100  Identities=29%  Similarity=0.440  Sum_probs=77.7

Q ss_pred             CceeEeecCcceEEEEEECCceEEEEEecCHHHHHHHHH--HHHHHhcCCCCceeeeeeeEec-----CceEEEEeecCC
Q psy9377           4 GSKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVKLYGACTG-----NPVCLVMEYAEG   76 (106)
Q Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~-----~~~~lv~e~~~~   76 (106)
                      ..+.||+|+||.||++.+.+..+|+|.++.... .....  |+..+..++||||+++++.+..     ...++||||+++
T Consensus         7 l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~-~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~   85 (303)
T d1vjya_           7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH   85 (303)
T ss_dssp             EEEEEECCSSSEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred             EEEEEeeCCCeEEEEEEECCEEEEEEEECccch-hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccC
Confidence            457899999999999999999999999864432 23333  4444556799999999999832     257999999999


Q ss_pred             CChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          77 GSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        77 g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |+|.+++++.. ++.+....++.|++.++
T Consensus        86 g~L~~~l~~~~-l~~~~~~~~~~~ia~gl  113 (303)
T d1vjya_          86 GSLFDYLNRYT-VTVEGMIKLALSTASGL  113 (303)
T ss_dssp             CBHHHHHHHCC-BCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHhcCC-CCHHHHHHHHHHHHHHH
Confidence            99999998754 66777677777776553

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=8.1e-19  Score=105.07  Aligned_cols=104  Identities=23%  Similarity=0.271  Sum_probs=84.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCH----HHHHHHHHHHHHHhcCCCCceeeeeeeEe---------cCc
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETE----AERKAFAVEVRQLSRVSHPNIVKLYGACT---------GNP   66 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~   66 (106)
                      |++.+.||+|+||.||++.+.  +..+|+|.+...    .....+.+|+.+++.++|+|++++.+.+.         .+.
T Consensus        12 Y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~   91 (318)
T d3blha1          12 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS   91 (318)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------C
T ss_pred             EEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCce
Confidence            778899999999999999986  789999988532    22356789999999999999999998872         245


Q ss_pred             eEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          67 VCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        67 ~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      .+++||++.++.+.........+++..++.++.|++.|+
T Consensus        92 ~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l  130 (318)
T d3blha1          92 IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL  130 (318)
T ss_dssp             EEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHH
Confidence            899999998877666666666788999999999999875

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.4e-19  Score=108.72  Aligned_cols=104  Identities=22%  Similarity=0.319  Sum_probs=88.4

Q ss_pred             CCCceeEeecCcceEEEEEEC-----CceEEEEEecCH------HHHHHHHHHHHHHhcCCC-CceeeeeeeE-ecCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-----NQYVAVKHIETE------AERKAFAVEVRQLSRVSH-PNIVKLYGAC-TGNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~------~~~~~~~~~~~~~~~~~~-~~i~~~~~~~-~~~~~~   68 (106)
                      |++.+.||+|+||.||++.+.     +..+|+|.++..      ...+.+.+|+.++..++| ||++++.+.+ .....+
T Consensus        26 y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~  105 (322)
T d1vzoa_          26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH  105 (322)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred             eEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCcee
Confidence            667899999999999999763     578999988521      123457789999999976 8999999998 568899


Q ss_pred             EEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      +++||+.+|+|.++++..+..++..+..++.|++.|+
T Consensus       106 ~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al  142 (322)
T d1vzoa_         106 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLAL  142 (322)
T ss_dssp             EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred             eeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHH
Confidence            9999999999999999888888999999999999875

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=5e-19  Score=107.33  Aligned_cols=102  Identities=23%  Similarity=0.357  Sum_probs=80.2

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeEe-------cCceEEEEe
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACT-------GNPVCLVME   72 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~lv~e   72 (106)
                      |+..+.||+|+||.||++.+.  +..+|+|.+....  ....+|+.++..++|+|++++.+++.       ..+++++||
T Consensus        22 Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~E   99 (350)
T d1q5ka_          22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD   99 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEE
T ss_pred             cEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc--hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEe
Confidence            667889999999999999987  7899999986432  12236889999999999999999882       134789999


Q ss_pred             ecCCCChHHHH---hcCCCCchhhhhhhhhccccCC
Q psy9377          73 YAEGGSLYNEL---QRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        73 ~~~~g~l~~~l---~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      |++++.+....   .....+++..++.++.|++.||
T Consensus       100 y~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL  135 (350)
T d1q5ka_         100 YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL  135 (350)
T ss_dssp             CCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             ccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHH
Confidence            99875433332   3345688999999999999886

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=5.2e-18  Score=101.33  Aligned_cols=104  Identities=26%  Similarity=0.391  Sum_probs=82.1

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcCCCCceeeeeeeEe-cCceEEE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYGACT-GNPVCLV   70 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~lv   70 (106)
                      |...+.||+|+||.||++.++       +..||+|.++..   .....+.+|+.++..++|||++++.+.+. .+..++|
T Consensus        22 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv  101 (308)
T d1p4oa_          22 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI  101 (308)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEE
Confidence            456688999999999999764       367999998632   23456889999999999999999999994 5789999


Q ss_pred             EeecCCCChHHHHhcCC----------CCchhhhhhhhhccccCC
Q psy9377          71 MEYAEGGSLYNELQRSS----------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        71 ~e~~~~g~l~~~l~~~~----------~~~~~~~~~~~~qll~~~  105 (106)
                      |||+++|+|.+++....          .++......++.|++.|+
T Consensus       102 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl  146 (308)
T d1p4oa_         102 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM  146 (308)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHH
T ss_pred             EeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHH
Confidence            99999999999986432          234455566777777654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.6e-18  Score=102.23  Aligned_cols=104  Identities=30%  Similarity=0.350  Sum_probs=78.7

Q ss_pred             CCCceeEeecCcceEEEEEEC---------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe-cCce
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT-GNPV   67 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~   67 (106)
                      |.+.+.||+|+||.||++...         +..+|+|.++..   .....+.+|...+..+ +||||+++++++. .+..
T Consensus        15 ~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~   94 (299)
T d1fgka_          15 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL   94 (299)
T ss_dssp             EEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             eEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeE
Confidence            556789999999999999764         136899988532   3345677787777776 7999999999994 5779


Q ss_pred             EEEEeecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          68 CLVMEYAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        68 ~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      ++||||+++|+|.+++....                .++...+..++.|++.|+
T Consensus        95 ~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al  148 (299)
T d1fgka_          95 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM  148 (299)
T ss_dssp             EEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHH
Confidence            99999999999999997543                367888899999998875

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.1e-17  Score=98.23  Aligned_cols=104  Identities=31%  Similarity=0.423  Sum_probs=79.7

Q ss_pred             CCCceeEeecCcceEEEEEEC-------CceEEEEEecCH---HHHHHHHHHHHHHhcC-CCCceeeeeeeEe--cCceE
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETE---AERKAFAVEVRQLSRV-SHPNIVKLYGACT--GNPVC   68 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~--~~~~~   68 (106)
                      |++.+.||+|+||.||++.+.       +..+|+|.++..   ...+.+.+|...+..+ .|+|++.+.+.+.  .+..+
T Consensus        15 y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~   94 (299)
T d1ywna1          15 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM   94 (299)
T ss_dssp             EEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCE
T ss_pred             EEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEE
Confidence            566789999999999999864       257899988632   2345566677666665 6889999988873  35689


Q ss_pred             EEEeecCCCChHHHHhcCC----------------CCchhhhhhhhhccccCC
Q psy9377          69 LVMEYAEGGSLYNELQRSS----------------AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        69 lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~~~qll~~~  105 (106)
                      ++|||+++|+|.+++....                .+++..+..++.|++.|+
T Consensus        95 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl  147 (299)
T d1ywna1          95 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM  147 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHH
Confidence            9999999999999997532                366778888999998775

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=2e-17  Score=98.25  Aligned_cols=103  Identities=20%  Similarity=0.192  Sum_probs=80.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCCCceeeeeeeE--ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC--TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~lv~e~~~~g   77 (106)
                      |++.+.||+|+||.||++.+.  +..+|+|.+........+..|..++..++|++++.....+  ..+..+++||++. +
T Consensus         9 Y~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~-~   87 (299)
T d1ckia_           9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG-P   87 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC-C
T ss_pred             EEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC-C
Confidence            678899999999999999987  7899999876544444577899999999887766554444  4577899999995 4


Q ss_pred             ChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      ++.+.+.. .+.+++..+..++.|++.||
T Consensus        88 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l  116 (299)
T d1ckia_          88 SLEDLFNFCSRKFSLKTVLLLADQMISRI  116 (299)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             chhhhhhhccCCCcHHHHHHHHHHHHHHH
Confidence            66666554 55788999999999998875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.67  E-value=5.2e-17  Score=96.36  Aligned_cols=103  Identities=23%  Similarity=0.286  Sum_probs=83.6

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHHHHHHHHHHHHHHhcCCC-CceeeeeeeE-ecCceEEEEeecCCC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAVEVRQLSRVSH-PNIVKLYGAC-TGNPVCLVMEYAEGG   77 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~-~~~~~~lv~e~~~~g   77 (106)
                      |++.+.||+|+||.||++.+.  +..+|+|.++.......+.+|...+..++| ++++.+.+.+ .....+++||++ ++
T Consensus         7 Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~   85 (293)
T d1csna_           7 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GP   85 (293)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CC
Confidence            678899999999999999987  788999988644333446677888888865 7888888887 457789999999 67


Q ss_pred             ChHHHHhcCC-CCchhhhhhhhhccccCC
Q psy9377          78 SLYNELQRSS-AASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        78 ~l~~~l~~~~-~~~~~~~~~~~~qll~~~  105 (106)
                      +|.++++..+ .++...+..++.|++.||
T Consensus        86 ~l~~~~~~~~~~~~~~~~~~i~~q~~~~l  114 (293)
T d1csna_          86 SLEDLLDLCGRKFSVKTVAMAAKQMLARV  114 (293)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHhhccchhhHHHHHHHHHHHHHH
Confidence            9999987654 688888889999988765

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.4e-17  Score=98.09  Aligned_cols=104  Identities=22%  Similarity=0.296  Sum_probs=78.2

Q ss_pred             CCCceeEeecCcceEEEEEEC---CceEEEEEecCH----HHHHHHHHHHHHHhc---CCCCceeeeeeeEe------cC
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ---NQYVAVKHIETE----AERKAFAVEVRQLSR---VSHPNIVKLYGACT------GN   65 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~----~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~------~~   65 (106)
                      |++++.||+|+||.||++.+.   +..+|+|.++..    .......+|+.+++.   .+|||++++++.+.      ..
T Consensus         9 Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~   88 (305)
T d1blxa_           9 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   88 (305)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred             EEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCc
Confidence            778899999999999999885   456899988521    112234556665554   58999999999882      14


Q ss_pred             ceEEEEeecCCCChHHHHhc-CCCCchhhhhhhhhccccCC
Q psy9377          66 PVCLVMEYAEGGSLYNELQR-SSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        66 ~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~qll~~~  105 (106)
                      ..++++|++.++++...... ...+++..++.++.|++.||
T Consensus        89 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL  129 (305)
T d1blxa_          89 KLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL  129 (305)
T ss_dssp             EEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHH
Confidence            58999999988766544443 34688889999999999876

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.38  E-value=7.7e-13  Score=79.92  Aligned_cols=104  Identities=23%  Similarity=0.239  Sum_probs=75.8

Q ss_pred             CCCceeEeecCcceEEEEEEC--CceEEEEEecCHH-HHHHHHHHHHHHhcCC-----------CCceeeeeeeEe---c
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-ERKAFAVEVRQLSRVS-----------HPNIVKLYGACT---G   64 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~-----------~~~i~~~~~~~~---~   64 (106)
                      |++.+.||+|+||.||++.+.  +..+|+|.++... ......+|+.+++.+.           |+|++++.+.+.   .
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~   94 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP   94 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccc
Confidence            778899999999999999986  7899999997543 3456677777766553           578999988872   3


Q ss_pred             CceEEEEeecCCCCh-HHHHh--cCCCCchhhhhhhhhccccCC
Q psy9377          65 NPVCLVMEYAEGGSL-YNELQ--RSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        65 ~~~~lv~e~~~~g~l-~~~l~--~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ...++++.++..+.. .....  ....+++..++.++.|++.|+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al  138 (362)
T d1q8ya_          95 NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL  138 (362)
T ss_dssp             TEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHH
T ss_pred             cceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHH
Confidence            556667766654432 22222  234677888999999998875

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.16  E-value=1.1e-10  Score=64.94  Aligned_cols=94  Identities=17%  Similarity=0.176  Sum_probs=65.3

Q ss_pred             CCCceeEeecCcceEEEEEEC-CceEEEEEecCH--------------------HHHHHHHHHHHHHhcCCCCceeeeee
Q psy9377           2 LGGSKIVGQGAFGVVWKGLWQ-NQYVAVKHIETE--------------------AERKAFAVEVRQLSRVSHPNIVKLYG   60 (106)
Q Consensus         2 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--------------------~~~~~~~~~~~~~~~~~~~~i~~~~~   60 (106)
                      +++.+.||+|+||.||.+.+. +..+|+|.++..                    ........|...+..+.+++++..++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            567899999999999999877 889999976421                    01123455777788888888777654


Q ss_pred             eEecCceEEEEeecCCCChHHHHhcCCCCchhhhhhhhhccccCC
Q psy9377          61 ACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFWFSSS  105 (106)
Q Consensus        61 ~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~qll~~~  105 (106)
                      ..   ..+++||++++..+.+       ++...+..++.|++.++
T Consensus        82 ~~---~~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l  116 (191)
T d1zara2          82 WE---GNAVLMELIDAKELYR-------VRVENPDEVLDMILEEV  116 (191)
T ss_dssp             EE---TTEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHH
T ss_pred             ec---CCEEEEEeeccccccc-------hhhHHHHHHHHHHHHHH
Confidence            32   2379999998765432       34455566777776654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.18  E-value=0.22  Score=27.52  Aligned_cols=71  Identities=15%  Similarity=0.056  Sum_probs=41.9

Q ss_pred             cceEEEEEECCceEEEEEecCHH--HHHHHHHHHHHHhcCC-CCceeeeeeeE-ecCceEEEEeecCCCChHHHH
Q psy9377          13 FGVVWKGLWQNQYVAVKHIETEA--ERKAFAVEVRQLSRVS-HPNIVKLYGAC-TGNPVCLVMEYAEGGSLYNEL   83 (106)
Q Consensus        13 ~~~v~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~lv~e~~~~g~l~~~l   83 (106)
                      .+.+|+....+..+.+|......  ....+.+|...+..+. +-.+.++.... .++..+++|++.+|.++.+..
T Consensus        27 ~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~  101 (263)
T d1j7la_          27 PAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY  101 (263)
T ss_dssp             SSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHT
T ss_pred             CCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccc
Confidence            35688776557778888775321  1223445555554432 22233444444 457789999999988776544

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=82.19  E-value=0.81  Score=24.99  Aligned_cols=66  Identities=15%  Similarity=0.097  Sum_probs=37.8

Q ss_pred             ceEEEEEEC-CceEEEEEecCHHHHHHHHHHHHHHhcCC--CCceeeeeeeE-ecCceEEEEeecCCCChH
Q psy9377          14 GVVWKGLWQ-NQYVAVKHIETEAERKAFAVEVRQLSRVS--HPNIVKLYGAC-TGNPVCLVMEYAEGGSLY   80 (106)
Q Consensus        14 ~~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~-~~~~~~lv~e~~~~g~l~   80 (106)
                      +.+|+.... +..+.+|..... ....+..|...+..+.  ...+.+++... .++..+++|++++|.++.
T Consensus        25 ~~v~r~~~~~~~~~vlK~~~~~-~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          25 AAVFRLSAQGRPVLFVKTDLSG-ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             CEEEEEECTTSCCEEEEEECSC-TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CeEEEEEeCCCCEEEEEeCCcc-CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            567877665 556777866432 1223444555444432  22344444444 346789999999876553