Diaphorina citri psyllid: psy9378

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520--
YPYRETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHAVIEEHIWLMLKDRLPLTQDHFIKENQPVRNDSWDELPHMDDYEDIIPFSYFAYLNCYPNVNMKLQNPEDQIYVLDRGNDAVHVMKSIILSGVPVYNYPDNIRVLPEFQPTISVWKRIPKSLMVYPRTDDMTQVPVYNYPDNVGMKEDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIRCDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGRYYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCIIYDHAVCTPIPFNVMDDSQVSLRSPLFLQESFLLSCLSLFFCVLWLCGQVY
ccccccCEEEEEEcccccccccccccccccccccccEEEEccccccccccccccccccccCEEEEEccHHHHHHHHcccccccccHccccccccccccccccccccccccccccccEEcccccccccccccccccEEccccccHHHHcHHHHcccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccCEEEEEHHHHHHHHHHHHHHcccccccEEccccccHHHHHHHHHcccccCCccccHHHHHHHHHccccEEEcccHHHHHHHHHHccccEEEEEEEEccccccccccccccccccccHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccEEcccccccccccccHHHHHHHHHHHHHHHcccccccEEEEcccHHHHccccEEEEEEEEEEECcccccccccCEEEEEcccccccccHHHccccCEEEEEECccccccccccccCECccccccccccccHHccccccccc
*****TLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHAVIEEHIWLMLKDRLPLTQD*****NQPVRNDSWDELPHMDDYEDIIPFSYFAYLNCYPNVNMKLQNPEDQIYVLDRGNDAVHVMKSIILSGVPVYNYPDNIRVLPEFQPTISVWKRIPKSLMVYPRTDDMTQVPVYNYPDNVGMKEDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIRCDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGRYYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCIIYDHAVCTPIPFNVMDDSQVSLRSPLFLQESFLLSCLSLFFCVLWLCGQVY
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YPYRETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHAVIEEHIWLMLKDRLPLTQDHFIKENQPVRNDSWDELPHMDDYEDIIPFSYFAYLNCYPNVNMKLQNPEDQIYVLDRGNDAVHVMKSIILSGVPVYNYPDNIRVLPEFQPTISVWKRIPKSLMVYPRTDDMTQVPVYNYPDNVGMKEDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIRCDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGRYYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCIIYDHAVCTPIPFNVMDDSQVSLRSPLFLQESFLLSCLSLFFCVLWLCGQVY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ornithine decarboxylase confidentP27117
Ornithine decarboxylase confidentP00860
Ornithine decarboxylase confidentP11926

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0009446 [BP]putrescine biosynthetic processprobableGO:0006596, GO:0006595, GO:0042401, GO:0034641, GO:0006807, GO:1901576, GO:0071704, GO:0009308, GO:0009309, GO:0009445, GO:0009987, GO:0044106, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:1901564, GO:0044271, GO:0006576, GO:1901566, GO:0044249, GO:0044237, GO:0043170
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0003674 [MF]molecular_functionprobable

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2OO0, chain A
Confidence level:very confident
Coverage over the Query: 208-522
View the alignment between query and template
View the model in PyMOL
Template: 3VAB, chain A
Confidence level:very confident
Coverage over the Query: 184-522
View the alignment between query and template
View the model in PyMOL
Template: 3BTN, chain A
Confidence level:very confident
Coverage over the Query: 6-80
View the alignment between query and template
View the model in PyMOL