Diaphorina citri psyllid: psy9395

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------
MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGDFSTTSLAKRLKELQLSHGRLKTGTPPRIDKRTIDFSKMEEQIGDFDPVPVFSVLGNINLHPKQLSCFITHTNEKTHNIIRSEFKNSPIFSGKIESIGPRYCPSIEDKVYRFPKKKSHHIFLEPEGIVINEYYPNGISTSLPFEAQIELVQSIDGMKNANIIRPGYAIEYDYFNPCNLKSSLETKQIHGLFFAGQINGTTGYEEAASQGLLAGLNAALFSQDRDPWIPGRDQAYLGVLVDDLITKGIQEPYRMFTSRAEYRLNLREDNADLRLTEIGWKLGCVSYKQWKIFEKKREIITKELQRLKDTWINPSILNTGESERVLGKRIKHEYSLSNLLTWPNVNYNTLTSLKGINGKNLYNTEIYQEDIKKQLKIQLQYEGYILRQINEVEKNKINENLKLPHNLDYMKIQSLSIEARQKLNKYKPETIGQASRISGVTPAALTLLLIYLKSGFLKNFIKK
cccccccEEEEEcccHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEcccEEEEEEccEEEEEEEccccEEEccEEEEccccccccEEEEEcccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccEEccccccccccccccccccccccccccccccccccccEECcccccccccHHHHHHHHHccccccccEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEcccccccccccccccHHHHHHHHHHcccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHcccccccccHHHHHccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccccHHHHcccccccHHHHHHHHHHHHcccccHHHcc
*LFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGDFSTTSLAKRLKELQLSHGRLKTGTPPRIDKRTIDFSKMEEQIGDFDPVPVFSVLGNINLHPKQLSCFITHTNEKTHNIIRSEFKNSPIFSGKIESIGPRYCPSIEDKVYRFPKKKSHHIFLEPEGIVINEYYPNGISTSLPFEAQIELVQSIDGMKNANIIRPGYAIEYDYFNPCNLKSSLETKQIHGLFFAGQINGTTGYEEAASQGLLAGLNAALFSQDRDPWIPGRDQAYLGVLVDDLITKGIQEPYRMFTSRAEYRLNLREDNADLRLTEIGWKLGCVSYKQWKIFEKKREIITKELQRLKDTWINPSILNTGESERVLGKRIKHEYSLSNLLTWPNVNYNTLTSLKGINGKNLYNTEIYQEDIKKQLKIQLQYEGYILRQINEVEKNKINENLKLPHNLDYMKIQSLSIEARQKLNKYKPETIGQASRISGVTPAALTLLLIYLKSGFLK*****
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MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGDFSTTSLAKRLKELQLSHGRLKTGTPPRIDKRTIDFSKMEEQIGDFDPVPVFSVLGNINLHPKQLSCFITHTNEKTHNIIRSEFKNSPIFSGKIESIGPRYCPSIEDKVYRFPKKKSHHIFLEPEGIVINEYYPNGISTSLPFEAQIELVQSIDGMKNANIIRPGYAIEYDYFNPCNLKSSLETKQIHGLFFAGQINGTTGYEEAASQGLLAGLNAALFSQDRDPWIPGRDQAYLGVLVDDLITKGIQEPYRMFTSRAEYRLNLREDNADLRLTEIGWKLGCVSYKQWKIFEKKREIITKELQRLKDTWINPSILNTGESERVLGKRIKHEYSLSNLLTWPNVNYNTLTSLKGINGKNLYNTEIYQEDIKKQLKIQLQYEGYILRQINEVEKNKINENLKLPHNLDYMKIQSLSIEARQKLNKYKPETIGQASRISGVTPAALTLLLIYLKSGFLKNFIKK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.very confidentQ2STD7
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.very confidentB1K1K2
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.very confidentA9AJF1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030488 [BP]tRNA methylationprobableGO:0009451, GO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0034470, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0006400, GO:0032259, GO:0008033, GO:0009987, GO:0006725, GO:0043412, GO:0043414, GO:0008152, GO:0001510, GO:0046483, GO:0016070, GO:0044238, GO:0044237, GO:0043170, GO:0006399, GO:0008150, GO:0006396
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0070899 [BP]mitochondrial tRNA wobble uridine modificationprobableGO:0009451, GO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:0044281, GO:0034660, GO:0034470, GO:0046085, GO:0007005, GO:0006139, GO:0044710, GO:0044260, GO:1901657, GO:0071840, GO:0042278, GO:0000963, GO:0016043, GO:0071704, GO:0010467, GO:1900864, GO:0006400, GO:0046483, GO:0016070, GO:0008033, GO:0044238, GO:0009987, GO:0006725, GO:0072521, GO:0002097, GO:0043412, GO:0044763, GO:0009116, GO:0008152, GO:0009119, GO:0046128, GO:0055086, GO:0002098, GO:0006996, GO:0070900, GO:0044699, GO:1901564, GO:1901135, GO:0044237, GO:0043170, GO:0006399, GO:0008150, GO:0000959, GO:0006396, GO:0070525
GO:0016491 [MF]oxidoreductase activityprobableGO:0003824, GO:0003674
GO:0050660 [MF]flavin adenine dinucleotide bindingprobableGO:0043168, GO:0050662, GO:0097159, GO:0043167, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:0000166, GO:1901363, GO:1901265
GO:0006412 [BP]translationprobableGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3CES, chain A
Confidence level:very confident
Coverage over the Query: 4-171,185-264,280-557
View the alignment between query and template
View the model in PyMOL