Diaphorina citri psyllid: psy9396

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------115
MIPQFIHLRLHSEYSIIDGLLRINDVIEAAANDYQPALAITDLSNLFGIIKFYKSAYNKGIKPIIGCDVWITNEIENKKPSRLLLLVKNNNGYLQLCELLSKAYIENINYGRAEIRIEWLEKNKYQDGLIALSGAHLGDIGIAVQNGRNDIAENFARRWSKIFPDNFYIEIQRFKQPNMNFQIQQFINIASNINLPIVATHPIQFLKKTEFLAHEVRTCIAEGEILSNTKRIKKFTKEQNFKTQSEMIKLFYDIPSAIQNTIEIAKRCNLKLEFGKPKLPKFPTPKNININDFLISKSKHGLKKRLLNLYKDPEIYKCEKLRYKKRLQFEIETIIKMNFSGYFLIVSDFIQWAKNNSIPVGPGRGSGASSLVAYSLSITDIDPLSYNLLFERFLNPNRISMPDFDIDFCPEGRDRVIQYVKDRYGKDAVSQIVTFGTMAAKGAIRDVGRVLDLRYSFCDSISKLIPFKPGKLITLSNAIKEEPQLAERIKNEEEVRQLIELAKQVEGIIRNVGMHAGGVLIAPSKLINFCPLYKQEGMTGIISQYDKDDIEEIGLIKFDFLGLTTLSILDKTIYFIKKINTKTTNFSLNKLPLNDKDTYNLLKKANTVAVFQLESQGMKNMLKEAKPDYFEEIIALISLYRPGPMDLIKNFCRRKHGEYFNYPDPRTKDVLSETYGIMVYQEQVMQIAQILGGYSLGQADLLRRAIGKKKTSEMIEHRKFFQNGAIKYGLSKHKANEIFNEIEKFAGYGFNKSHATAYALLSYYTAYLKTHYSSFFMAANLSLSMDDTNKIKILVKDAIKTCGLSILPPNINLSKYYFFPIIESDGKHKKIRYGLGAIKGTGKSTIEAIVTERKFGFFTNLFDFTKRIDKKYINRRIINSLINSGAFDCFNEKRYMLVASIDVALKNAEKTKKFINQLSLFKNDDNNNLKEYLNYVKVPSWSKKQELIEEKKVLGFCLSEHIFCIYETEIRQFIPIYLSELKPTYSCTVSGIITELKLKTTYRGKILIIVIDDNSNSVEVIINNQLYEKNKNILKENELLIVSGKVLEDRFLKNIRINAEKIFDINVARILYGKKFSVMFNRTFNISILKKILLRFKCKNGLPFVLYYCINKSIKYEMKFPLNYKVQPIDDLKLALINLGLYNAIIEYS
cccccccccccccHHHHHccccHHHHHHHHHHccccEEEEccccccEEHHHHHHHHHHccccEEEEEEEEEEccccccccccEEEEEcccHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccEEEEccccccHHHHHHHcccHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHHHHccccEEEEcccccccccccHHHHHHHHHHccccccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHcccEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccEEEEccHHccHHHHHHHHHccccccHHHHHHcccccccccccccHHHHHHHcHHHHHHHHccHHHHHHHHHHHHHHcccccccccccEEEEcccccccccccEEcccccccEEcccccHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHcccccEEEEcccHHHHHHHHHcccccHHHHHHHHHccccccccccHHHHHcccccccccccccccccccccccEEEEHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccHHHHHHHHHHHHHcccEEcccccccccccEEEEECccccccEEEEEccccccccHHHHHHHHHHHcccccccHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHEEEEccccHHHHHHHHHHHcccccccccccccEEEEEEEEEEEEEEcccccEEEEEEEEcccEEEEEEcHHHHHHHHcccccccEEEEEEEEEEccccccEEEEEcccccHHHHHHHcccEEEEEEcccccHHHHHHHHHHccccccccEEEEEEEcccEEEEEEccccccccccHHHHHHHHHcccccEEEEcc
*IPQFIHLRLHSEYSIIDGLLRINDVIEAAANDYQPALAITDLSNLFGIIKFYKSAYNKGIKPIIGCDVWITNEIENKKPSRLLLLVKNNNGYLQLCELLSKAYIENINYGRAEIRIEWLEKNKYQDGLIALSGAHLGDIGIAVQNGRNDIAENFARRWSKIFPDNFYIEIQRFKQPNMNFQIQQFINIASNINLPIVATHPIQFLKKTEFLAHEVRTCIAEGEILSNTKRIKKFTKEQNFKTQSEMIKLFYDIPSAIQNTIEIAKRCNLKLEFGKPKLPKFPTPKNININDFLISKSKHGLKKRLLNLYKDPEIYKCEKLRYKKRLQFEIETIIKMNFSGYFLIVSDFIQWAKNNSIPVGPGRGSGASSLVAYSLSITDIDPLSYNLLFERFLNPNRISMPDFDIDFCPEGRDRVIQYVKDRYGKDAVSQIVTFGTMAAKGAIRDVGRVLDLRYSFCDSISKLIPFKPGKLITLSNAIKEEPQLAERIKNEEEVRQLIELAKQVEGIIRNVGMHAGGVLIAPSKLINFCPLYKQEGMTGIISQYDKDDIEEIGLIKFDFLGLTTLSILDKTIYFIKKINTKTTNFSLNKLPLNDKDTYNLLKKANTVAVFQLESQGMKNMLKEAKPDYFEEIIALISLYRPGPMDLIKNFCRRKHGEYFNYPDPRTKDVLSETYGIMVYQEQVMQIAQILGGYSLGQADLLRRAIGKKKTSEMIEHRKFFQNGAIKYGLSKHKANEIFNEIEKFAGYGFNKSHATAYALLSYYTAYLKTHYSSFFMAANLSLSMDDTNKIKILVKDAIKTCGLSILPPNINLSKYYFFPIIESDGKHKKIRYGLGAIKGTGKSTIEAIVTERKFGFFTNLFDFTKRIDKKYINRRIINSLINSGAFDCFNEKRYMLVASIDVALKNAEKTKK*****S*FKNDDNNNLKEYLNYVKVPSWSKKQELIEEKKVLGFCLSEHIFCIYETEIRQFIPIYLSELKPTYSCTVSGIITELKLKTTYRGKILIIVIDDNSNSVEVIINNQLYEKNKNILKENELLIVSGKVLEDRFLKNIRINAEKIFDINVARILYGKKFSVMFNRTFNISILKKILLRFKCKNGLPFVLYYCINKSIKYEMKFPLNYKVQPIDDLKLALINLGLYNAIIEYS
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MIPQFIHLRLHSEYSIIDGLLRINDVIEAAANDYQPALAITDLSNLFGIIKFYKSAYNKGIKPIIGCDVWITNEIENKKPSRLLLLVKNNNGYLQLCELLSKAYIENINYGRAEIRIEWLEKNKYQDGLIALSGAHLGDIGIAVQNGRNDIAENFARRWSKIFPDNFYIEIQRFKQPNMNFQIQQFINIASNINLPIVATHPIQFLKKTEFLAHEVRTCIAEGEILSNTKRIKKFTKEQNFKTQSEMIKLFYDIPSAIQNTIEIAKRCNLKLEFGKPKLPKFPTPKNININDFLISKSKHGLKKRLLNLYKDPEIYKCEKLRYKKRLQFEIETIIKMNFSGYFLIVSDFIQWAKNNSIPVGPGRGSGASSLVAYSLSITDIDPLSYNLLFERFLNPNRISMPDFDIDFCPEGRDRVIQYVKDRYGKDAVSQIVTFGTMAAKGAIRDVGRVLDLRYSFCDSISKLIPFKPGKLITLSNAIKEEPQLAERIKNEEEVRQLIELAKQVEGIIRNVGMHAGGVLIAPSKLINFCPLYKQEGMTGIISQYDKDDIEEIGLIKFDFLGLTTLSILDKTIYFIKKINTKTTNFSLNKLPLNDKDTYNLLKKANTVAVFQLESQGMKNMLKEAKPDYFEEIIALISLYRPGPMDLIKNFCRRKHGEYFNYPDPRTKDVLSETYGIMVYQEQVMQIAQILGGYSLGQADLLRRAIGKKKTSEMIEHRKFFQNGAIKYGLSKHKANEIFNEIEKFAGYGFNKSHATAYALLSYYTAYLKTHYSSFFMAANLSLSMDDTNKIKILVKDAIKTCGLSILPPNINLSKYYFFPIIESDGKHKKIRYGLGAIKGTGKSTIEAIVTERKFGFFTNLFDFTKRIDKKYINRRIINSLINSGAFDCFNEKRYMLVASIDVALKNAEKTKKFINQLSLFKNDDNNNLKEYLNYVKVPSWSKKQELIEEKKVLGFCLSEHIFCIYETEIRQFIPIYLSELKPTYSCTVSGIITELKLKTTYRGKILIIVIDDNSNSVEVIINNQLYEKNKNILKENELLIVSGKVLEDRFLKNIRINAEKIFDINVARILYGKKFSVMFNRTFNISILKKILLRFKCKNGLPFVLYYCINKSIKYEMKFPLNYKVQPIDDLKLALINLGLYNAIIEYS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DNA polymerase III subunit alpha DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase.confidentP52022
DNA polymerase III subunit alpha DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase.confidentQ9Z7N8
DNA polymerase III subunit alpha DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase.confidentQ9PGU4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0008408 [MF]3'-5' exonuclease activityprobableGO:0016787, GO:0004518, GO:0004527, GO:0016788, GO:0003824, GO:0003674
GO:0005618 [CC]cell wallprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0003887 [MF]DNA-directed DNA polymerase activityprobableGO:0016779, GO:0016772, GO:0034061, GO:0003824, GO:0016740, GO:0003674
GO:0006260 [BP]DNA replicationprobableGO:0071704, GO:1901576, GO:0044238, GO:0008152, GO:0044260, GO:0006139, GO:0009987, GO:0006725, GO:0034641, GO:0044237, GO:0043170, GO:0090304, GO:0044249, GO:0009058, GO:0009059, GO:0006807, GO:0034645, GO:0006259, GO:0008150, GO:1901360, GO:0046483
GO:0009360 [CC]DNA polymerase III complexprobableGO:0043234, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0042575
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.7.-Nucleotidyltransferases.probable
2.7.7.7DNA-directed DNA polymerase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2HNH, chain A
Confidence level:very confident
Coverage over the Query: 1-907
View the alignment between query and template
View the model in PyMOL
Template: 3F2B, chain A
Confidence level:confident
Coverage over the Query: 990-1066
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
2hpi, chain Avery confident Alignment | Template Structure