Diaphorina citri psyllid: psy9584

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460------
MCIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFSQMLLKDHFQSSERAEHNLINCIDGTFTIPTFKV
cccHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccc
*CIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFSQMLLKDHFQSSERAEHNLINCIDGTFTIPTFK*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MCIQCLQAVFNFKPPPRVEARTHLQLGNILLTHTKNIDLARNHLEQAWHLSQSINAFDDVKFEAASVLAELYETQLLSNLSKPILRRAIELSQHSIYWHCRLIFQLAQIHAGEKDYELASSLLGVGVDYANISNAQYTRVLFLLSRCMLLLIDKKVNDAVQLLTQAGYQVENWTGSQYQKEYLKVFFLVLQVCHYLMAGQVKSVKPCLKQLQQSILTIMQPTWPSDEVVSGPNVGDMFIWMPKEHLYVVVYLVTVIGHLKFFGVTGTAGTEVERLSQERELWTFANLNLAIVYLRGKREGDFAALLERINPETLTSHSHSLRAAAYYVQGLQSFFQARYNEAKRYLRETLKMANAEDLNRLTSCSLVLLGHIFLSLGNHRESMNMVTPAMQLASKIPDVHVQLWASAILKDLYKILNDPVRENEALQMHCNFSQMLLKDHFQSSERAEHNLINCIDGTFTIPTFKV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
MAU2 chromatid cohesion factor homolog Required for association of the cohesin complex with chromatin during interphase. Plays a role in sister chromatid cohesion and normal progression through prometaphase.confidentQ296H8
MAU2 chromatid cohesion factor homolog Required for association of the cohesin complex with chromatin during interphase. Plays a role in sister chromatid cohesion and normal progression through prometaphase.confidentQ9VFC0
MAU2 chromatid cohesion factor homolog Required for association of the cohesin complex with chromatin during interphase. Plays a role in sister chromatid cohesion and normal progression through prometaphase.confidentQ9Y6X3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005654 [CC]nucleoplasmprobableGO:0005575, GO:0043231, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0000785 [CC]chromatinprobableGO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0044427, GO:0005694, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1HZ4, chain A
Confidence level:very confident
Coverage over the Query: 15-222,278-416
View the alignment between query and template
View the model in PyMOL
Template: 3ULQ, chain A
Confidence level:very confident
Coverage over the Query: 32-138,159-194,210-213,241-436
View the alignment between query and template
View the model in PyMOL