Diaphorina citri psyllid: psy9628


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110--
MSGTSSTNAPSMTNQIITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKYNFTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLWKRCVET
ccccccccccccccEEEEEccccHHHHHHHHHcHHHHHHHccccccccHHHHHHHHHHHccccccCEEEEEcEEEEEEEEECcEEEcccHHHHHcccccccccccccHHHHc
***********MTNQIITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKYNFTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLWKRCV**
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MSGTSSTNAPSMTNQIITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKYNFTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLWKRCVET

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
ATP synthase subunit gamma, mitochondrial Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(1) domain and the central stalk which is part of the complex rotary element. The gamma subunit protrudes into the catalytic domain formed of alpha(3)beta(3). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.confidentO01666

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005753 [CC]mitochondrial proton-transporting ATP synthase complexprobableGO:0019866, GO:0031975, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0005575, GO:0031090, GO:0016020, GO:0044444, GO:0005739, GO:0044455, GO:0031967, GO:0031966, GO:0043234, GO:0032991, GO:0043231, GO:0044464, GO:0045259, GO:0005623, GO:0005622, GO:0044446, GO:0005743, GO:0005740, GO:0044429, GO:0044424, GO:0044425, GO:0016469, GO:0044422

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2CK3, chain G
Confidence level:very confident
Coverage over the Query: 9-27,38-83
View the alignment between query and template
View the model in PyMOL