Diaphorina citri psyllid: psy9726

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
MFSKKIPSVCDQILRQSKNYGQNIVKNSIHSTAVIHQSVPEGRTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSIARNGICLKGVLSTPDYSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHSNVDCVIIREQTEGEYSALEHECVPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGK
ccccccccHHHHHHHHHHHHHHHHHHHccccccHHcccccccccccccccccccccccEEcccccccccccCEEEEEEccccccHHHHHHHHHHHHHccccccEEEEECcccccccccccHHHHHHHHHccEEEEccccccccccccccccHHHHHHHHcccEEccEEccccccccccccccCEEEEEcccccCEcccEEEEcccEEEEEEEEcHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccEEEcccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccc
********VCDQILRQSKNYGQNIVKNSIHSTAVIHQSVPEGRTKC***********************EGRTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSIARNGICLKGVLSTPDYSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHSNVDCVIIREQTEGEYSALEHECVPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAG*
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MFSKKIPSVCDQILRQSKNYGQNIVKNSIHSTAVIHQSVPEGRTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSIARNGICLKGVLSTPDYSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHSNVDCVIIREQTEGEYSALEHECVPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial Performs an essential role in the oxidative function of the citric acid cycle. Also binds RNA; specifically to the 5'-untranslated leaders of mitochondrial mRNAs.very confidentO13696
Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial Performs an essential role in the oxidative function of the citric acid cycle. Also binds RNA; specifically to the 5'-untranslated leaders of mitochondrial mRNAs.very confidentP28834
Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial very confidentQ93353

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005875 [CC]microtubule associated complexconfidentGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0004449 [MF]isocitrate dehydrogenase (NAD+) activityconfidentGO:0016614, GO:0016616, GO:0003824, GO:0003674, GO:0004448, GO:0016491
GO:0006099 [BP]tricarboxylic acid cycleconfidentGO:0044238, GO:0044710, GO:0015980, GO:0009987, GO:0044237, GO:0009060, GO:0008150, GO:0008152, GO:0045333, GO:0006091, GO:0055114
GO:0006103 [BP]2-oxoglutarate metabolic processconfidentGO:0043648, GO:0044710, GO:0006082, GO:0044237, GO:0009987, GO:0019752, GO:0071704, GO:0008150, GO:0044281, GO:0008152, GO:0043436
GO:0006102 [BP]isocitrate metabolic processconfidentGO:0044710, GO:0006082, GO:0044237, GO:0009987, GO:0019752, GO:0071704, GO:0008150, GO:0044281, GO:0008152, GO:0043436, GO:0072350
GO:0006734 [BP]NADH metabolic processconfidentGO:0019674, GO:0006732, GO:0006733, GO:0034641, GO:0006807, GO:0044281, GO:0072524, GO:1901360, GO:0006139, GO:0044710, GO:0051186, GO:0071704, GO:0009987, GO:0006793, GO:0006725, GO:0009117, GO:0008152, GO:0055086, GO:0046483, GO:0044238, GO:1901564, GO:0044237, GO:0006796, GO:0019362, GO:0019637, GO:0008150, GO:0006753, GO:0046496
GO:0005730 [CC]nucleolusconfidentGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005739 [CC]mitochondrionconfidentGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0042645 [CC]mitochondrial nucleoidprobableGO:0031974, GO:0043229, GO:0043228, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0005739, GO:0009295, GO:0005759, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0000287 [MF]magnesium ion bindingprobableGO:0043169, GO:0046872, GO:0003674, GO:0005488, GO:0043167
GO:0005962 [CC]mitochondrial isocitrate dehydrogenase complex (NAD+)probableGO:0031974, GO:0043229, GO:0045242, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0005739, GO:0005759, GO:0030062, GO:0045239, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0048046 [CC]apoplastprobableGO:0005575, GO:0005576
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0045335 [CC]phagocytic vesicleprobableGO:0005737, GO:0005575, GO:0043231, GO:0016023, GO:0031410, GO:0044464, GO:0044444, GO:0005623, GO:0031988, GO:0030139, GO:0043229, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0031982
GO:0051287 [MF]NAD bindingprobableGO:0050662, GO:0097159, GO:0000166, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:1901363, GO:1901265
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0009055 [MF]electron carrier activityprobableGO:0003674
GO:0047046 [MF]homoisocitrate dehydrogenase activityprobableGO:0003824, GO:0003674, GO:0016614, GO:0016616, GO:0016491
GO:0010171 [BP]body morphogenesisprobableGO:0032502, GO:0048856, GO:0044767, GO:0008150, GO:0009653, GO:0044699
GO:0045926 [BP]negative regulation of growthprobableGO:0008150, GO:0048519, GO:0040008, GO:0065007, GO:0050789
GO:0040010 [BP]positive regulation of growth rateprobableGO:0045927, GO:0040008, GO:0040009, GO:0065007, GO:0048518, GO:0008150, GO:0050789
GO:0006898 [BP]receptor-mediated endocytosisprobableGO:0006897, GO:0016192, GO:0006810, GO:0008150, GO:0051234, GO:0051179
GO:0040011 [BP]locomotionprobableGO:0008150
GO:0009085 [BP]lysine biosynthetic processprobableGO:0019752, GO:0016053, GO:0044249, GO:0006807, GO:0009067, GO:0009066, GO:0044283, GO:1901576, GO:0044710, GO:0044711, GO:0006520, GO:0071704, GO:1901605, GO:1901607, GO:0044238, GO:0009987, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0008652, GO:1901564, GO:1901566, GO:0006082, GO:0046394, GO:0006553, GO:0044237, GO:0044281
GO:0016246 [BP]RNA interferenceprobableGO:0010605, GO:0019222, GO:0035194, GO:0010608, GO:0009987, GO:0040029, GO:0050789, GO:0008150, GO:0060255, GO:0016458, GO:0065007, GO:0044763, GO:0031047, GO:0010629, GO:0048519, GO:0016441, GO:0009892, GO:0010468, GO:0044699
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0009507 [CC]chloroplastprobableGO:0005737, GO:0009536, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0009853 [BP]photorespirationprobableGO:0043094, GO:0009987, GO:0044237, GO:0044249, GO:0009058, GO:0008150, GO:0008152
GO:0040035 [BP]hermaphrodite genitalia developmentprobableGO:0032502, GO:0007548, GO:0032501, GO:0048608, GO:0000003, GO:0044707, GO:0022414, GO:0061458, GO:0048856, GO:0044767, GO:0003006, GO:0048513, GO:0048806, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0008340 [BP]determination of adult lifespanprobableGO:0032502, GO:0032501, GO:0007568, GO:0044707, GO:0044767, GO:0010259, GO:0008150, GO:0007275, GO:0044699
GO:0006537 [BP]glutamate biosynthetic processprobableGO:0044238, GO:0044283, GO:0019752, GO:0044249, GO:0006807, GO:0044281, GO:0009064, GO:1901576, GO:0044710, GO:0044711, GO:0043650, GO:0006520, GO:0071704, GO:1901605, GO:1901607, GO:0008652, GO:0009987, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0043648, GO:1901564, GO:1901566, GO:0006082, GO:0046394, GO:0016053, GO:0044237, GO:0006536, GO:0009084

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.1.-.-Acting on the CH-OH group of donors.probable
1.1.1.-15-hydroxyprostaglandin dehydrogenase (NAD(+)).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3DMS, chain A
Confidence level:very confident
Coverage over the Query: 34-57,72-381
View the alignment between query and template
View the model in PyMOL