Diaphorina citri psyllid: psy980

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------
MINLLLTGYFFLLGVLALCYLLSPVISPLVPAAIPNIPFHLKFDRGATNEEKKDGSEALLVIFDYKFSSHDIVCFIVCSVFGSWYLVKKHWIANNLFGLAFAVNGIELLHLNNVMIGVILLCGLFIYDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLLEHGVSANNFAMLGLGDIVVPGIFIALLLRFDLSLNRRSNTYFNTAFLAYFLGLMATIFVMHVFKHAQPALLYLVPACLGLPLLIIARISLMDNRYPTAGQRSHLHFSIEFYPDHLLKRRNNNNRFCAISISSLNRRSNTYFNTAFLAYFLGLMATIFVMHVFKHAQPALLYLFFSKDMINLLLTGYFFLLGVLALCYLLSPVISPLVPAAIPNIPFHLKFDRGATNEEKKDGSFDRGATNEEKKDGSEALLVIFDYKFSSHDIVCFIVCSVFGSWYLVKKHWIANNLFGLAFAVNGIELLHLNNVMIGVILLCGLFIYDIFWVFGTNVMVTVAKSFEAPIKYVHESFKGLTQWFSNFFAWHLGLMATIFVMHVFKHAQPALLYLVPACLGLPLLVALVKGDLSALINVVVSEVDMGLAVGWWFDTMSSY
cHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEEEECcHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccEEccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccccccccccccccccccccccEEEEEEEEEccHHHHHHHHcEEEEEEEEEEcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEEEEEccEEEEEcccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHcHHHHHcccccccccccccccccccccccc
MINLLLTGYFFLLGVLALCYLLSPVISPLVPAAIPNIPFHLKFDRGATNEEKKDGSEALLVIFDYKFSSHDIVCFIVCSVFGSWYLVKKHWIANNLFGLAFAVNGIELLHLNNVMIGVILLCGLFIYDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLLEHGVSANNFAMLGLGDIVVPGIFIALLLRFDLSLNRRSNTYFNTAFLAYFLGLMATIFVMHVFKHAQPALLYLVPACLGLPLLIIARISLMDNRYPTAGQRSHLHFSIEFYPDHLLKRRNNNNRFCAISISSLNRRSNTYFNTAFLAYFLGLMATIFVMHVFKHAQPALLYLFFSKDMINLLLTGYFFLLGVLALCYLLSPVISPLVPAAIPNIPFHLKFDRGATNEEKKDGSFDRGATNEEKKDGSEALLVIFDYKFSSHDIVCFIVCSVFGSWYLVKKHWIANNLFGLAFAVNGIELLHLNNVMIGVILLCGLFIYDIFWVFGTNVMVTVAKSFEAPIKYVHESFKGLTQWFSNFFAWHLGLMATIFVMHVFKHAQPALLYLVPACLGLPLLVALVKGDLSALINVVVSEVDMGLAVGWWFDT****
xxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHxxxxxHHxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxHxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MINLLLTGYFFLLGVLALCYLLSPVISPLVPAAIPNIPFHLKFDRGATNEEKKDGSEALLVIFDYKFSSHDIVCFIVCSVFGSWYLVKKHWIANNLFGLAFAVNGIELLHLNNVMIGVILLCGLFIYDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLLEHGVSANNFAMLGLGDIVVPGIFIALLLRFDLSLNRRSNTYFNTAFLAYFLGLMATIFVMHVFKHAQPALLYLVPACLGLPLLIIARISLMDNRYPTAGQRSHLHFSIEFYPDHLLKRRNNNNRFCAISISSLNRRSNTYFNTAFLAYFLGLMATIFVMHVFKHAQPALLYLFFSKDMINLLLTGYFFLLGVLALCYLLSPVISPLVPAAIPNIPFHLKFDRGATNEEKKDGSFDRGATNEEKKDGSEALLVIFDYKFSSHDIVCFIVCSVFGSWYLVKKHWIANNLFGLAFAVNGIELLHLNNVMIGVILLCGLFIYDIFWVFGTNVMVTVAKSFEAPIKYVHESFKGLTQWFSNFFAWHLGLMATIFVMHVFKHAQPALLYLVPACLGLPLLVALVKGDLSALINVVVSEVDMGLAVGWWFDTMSSY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Minor histocompatibility antigen H13 Catalyzes intramembrane proteolysis of some signal peptides after they have been cleaved from a preprotein, resulting in the release of the fragment from the ER membrane into the cytoplasm. Required to generate lymphocyte cell surface (HLA-E) epitopes derived from MHC class I signal peptides. Involved in the intramembrane cleavage of the integral membrane protein PSEN1 (By similarity). May play a role in graft rejection.confidentQ9D8V0

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006465 [BP]signal peptide processingprobableGO:0044267, GO:0051604, GO:1901564, GO:0043603, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0034641, GO:0044237, GO:0043170, GO:0071704, GO:0010467, GO:0006807, GO:0008150, GO:0008152, GO:0016485, GO:0006518
GO:0005791 [CC]rough endoplasmic reticulumprobableGO:0005737, GO:0005783, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226, GO:0043231
GO:0071458 [CC]integral to cytosolic side of endoplasmic reticulum membraneprobableGO:0005783, GO:0005789, GO:0042175, GO:0043229, GO:0030176, GO:0031301, GO:0031300, GO:0043227, GO:0031227, GO:0031224, GO:0005737, GO:0044446, GO:0031090, GO:0016021, GO:0016020, GO:0043226, GO:0044432, GO:0012505, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0044425, GO:0044422
GO:0007424 [BP]open tracheal system developmentprobableGO:0060541, GO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0033619 [BP]membrane protein proteolysisprobableGO:0044238, GO:0019538, GO:0043170, GO:0071704, GO:0008150, GO:0008152, GO:0006508
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0009986 [CC]cell surfaceprobableGO:0005575, GO:0044464, GO:0005623
GO:0004190 [MF]aspartic-type endopeptidase activityprobableGO:0016787, GO:0004175, GO:0070001, GO:0003824, GO:0070011, GO:0003674, GO:0008233
GO:0034620 [BP]cellular response to unfolded proteinprobableGO:0051716, GO:0006986, GO:0070887, GO:0006950, GO:0050896, GO:0009987, GO:0071310, GO:0008150, GO:0035967, GO:0035966, GO:0044763, GO:0033554, GO:0042221, GO:0010033, GO:0044699
GO:0071556 [CC]integral to lumenal side of endoplasmic reticulum membraneprobableGO:0005783, GO:0005789, GO:0042175, GO:0043229, GO:0030176, GO:0031301, GO:0031300, GO:0043227, GO:0031227, GO:0031224, GO:0005737, GO:0044446, GO:0031090, GO:0016021, GO:0016020, GO:0043226, GO:0044432, GO:0012505, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0044425, GO:0044422

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4HYG, chain A
Confidence level:confident
Coverage over the Query: 72-144,166-246
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
4hyg, chain Aconfident Alignment | Template Structure