Diaphorina citri psyllid: psy985


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-
MCGHSFNVSNPFSLLRWQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIAAAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTEDIDFKNS
ccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccEEEEEEEEEEccEEEEEEEccccccCEEEccccccccccccccccccEEEEEEcccHHHHHHHHHccHHHHHHHHHcccEEEEcccccEEEEEEccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccc
*******VSNPFSLLRWQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIAAAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKR*********
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MCGHSFNVSNPFSLLRWQPESKFQFSMVRLPPRETINSGFVENQEVEVFSKATEGESCGWWKVIVKMIKGDFHVVEYLGCQSTFTEIVPPERMRQKNTNPPIDAKTFHKFDIEVPLDVQEFAKMEGAHKDFQKAIAAAIVRYIPDKGALSVISRDEACQKRASMIKDMHFRNLNQKVVLLKRTEDIDFKNS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Fragile X mental retardation syndrome-related protein 1 RNA-binding protein that associates with translating ribosomes and acts as a negative translational regulator of specific mRNAs. Represses translation of futsch to regulate microtubule-dependent synaptic growth and function. Part of the RNA interference (RNAi)-related apparatus; double-stranded RNA induces potent and specific gene silencing. Regulates photoreceptor structure and neurotransmission in the eye. Required for stability of the central pair of microtubules in the spermatid axoneme.confidentQ9NFU0

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0048523 [BP]negative regulation of cellular processprobableGO:0008150, GO:0048519, GO:0065007, GO:0050789, GO:0050794
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0043621 [MF]protein self-associationprobableGO:0003674, GO:0005488, GO:0005515
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0003723 [MF]RNA bindingprobableGO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488
GO:0030529 [CC]ribonucleoprotein complexprobableGO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3H8Z, chain A
Confidence level:very confident
Coverage over the Query: 7-102
View the alignment between query and template
View the model in PyMOL
Template: 2WAC, chain A
Confidence level:probable
Coverage over the Query: 37-190
View the alignment between query and template
View the model in PyMOL