Diaphorina citri psyllid: psy9949

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
MFVCCKIFSKVPVQLNKINHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA
ccEEEEEECcccccccccccccccccccEEEEccccccccEEECccccccccccccEEEEEEEEccccHHHHHHcccccHHHHHHHcccccccccccccccECcccCEEEEEECcccccccccccEEEECccccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHHHcccEEEEEccccHHHHHHHccccEEEEcccccHHHHccccccCEEEEEccccccccccHHHHcccccccEEEEEccccccccccccccccHHHHHHHHHHHHcccccccccccEEEEEEECccHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHcccccccEEEEc
*FVCCKIFSKVPVQLNKINHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA
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MFVCCKIFSKVPVQLNKINHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Reticulon-4-interacting protein 1, mitochondrial Appears to be a potent inhibitor of regeneration following spinal cord injury.confidentQ0VC50
Reticulon-4-interacting protein 1, mitochondrial Appears to be a potent inhibitor of regeneration following spinal cord injury.confidentQ924D0
Reticulon-4-interacting protein 1, mitochondrial Appears to be a potent inhibitor of regeneration following spinal cord injury.confidentQ8WWV3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0000166 [MF]nucleotide bindingprobableGO:0097159, GO:0036094, GO:0003674, GO:0005488, GO:1901363, GO:1901265
GO:0000303 [BP]response to superoxideprobableGO:1901700, GO:0050896, GO:0000302, GO:0006950, GO:0008150, GO:0042221, GO:0010035, GO:0006979
GO:0009411 [BP]response to UVprobableGO:0008150, GO:0009314, GO:0050896, GO:0009416, GO:0009628
GO:0040014 [BP]regulation of multicellular organism growthprobableGO:0008150, GO:0040008, GO:0065007, GO:0050789, GO:0051239
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0016491 [MF]oxidoreductase activityprobableGO:0003824, GO:0003674
GO:0040010 [BP]positive regulation of growth rateprobableGO:0045927, GO:0040008, GO:0040009, GO:0065007, GO:0048518, GO:0008150, GO:0050789
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:0032504 [BP]multicellular organism reproductionprobableGO:0032501, GO:0008150, GO:0000003
GO:0009987 [BP]cellular processprobableGO:0008150
GO:0070482 [BP]response to oxygen levelsprobableGO:0009628, GO:0050896, GO:0008150
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0031967 [CC]organelle envelopeprobableGO:0005575, GO:0044464, GO:0005623, GO:0031975, GO:0044446, GO:0043229, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422
GO:0016319 [BP]mushroom body developmentprobableGO:0032502, GO:0044707, GO:0007420, GO:0007399, GO:0032501, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699, GO:0007417
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2VN8, chain A
Confidence level:very confident
Coverage over the Query: 23-383
View the alignment between query and template
View the model in PyMOL